View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16751_high_66 (Length: 258)
Name: NF16751_high_66
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_high_66 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 41508936 - 41509195
Alignment:
| Q |
11 |
gaaaaatatacca-gtataagtctaaaacatggaggggttttagatatgttacctaattccatattttgttcattaacaatgttactattttatcaataa |
109 |
Q |
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| T |
41508936 |
gaaaaatataccaagtataagtctaaaacatggaggagttttagatatgttacctaactccatattttgttcattaacaatgttactattttatcaataa |
41509035 |
T |
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| Q |
110 |
ctaatatttccatcaaaaa-------tgaccccgcggtctt----taggtggaatattctctcgcaaacccattttttcagttggcaaaaactctaatct |
198 |
Q |
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| T |
41509036 |
ctaatatttccatcaaaaaagttaattgaccccgcggtctttctttaggtggaatattctttcgcaaacccactttttcagttggcaaaaactctaatct |
41509135 |
T |
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| Q |
199 |
aaaacattacctaaaagatctaagacaaatacactgactttgaatatgttaagttaacac |
258 |
Q |
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| T |
41509136 |
aaaacattacctaaaagatctaagacaaatacactgattttgaatatgttaagttaacac |
41509195 |
T |
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