View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16751_high_80 (Length: 238)
Name: NF16751_high_80
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_high_80 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 33722899 - 33722694
Alignment:
| Q |
14 |
actttaaccccaccagagtaacaaatataattaattgtaaatcactttaaaatataaaactctttacactaacaatgacaatgcataaaaattaaactct |
113 |
Q |
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| T |
33722899 |
actttaaccccaccagagtaacaaatataattaattgtaaatcactt-aaaatataaaactctttacactaacaatgacaatgcataaaaattaaactct |
33722801 |
T |
|
| Q |
114 |
taaaactataataaatggccctataggctatacagcgagatttacataaatgatttccaaaacaaaagaacatttataaatgatgacttgattcaatatt |
213 |
Q |
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|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
33722800 |
taaaactataataaatagccctataggctatagagcgagatttacataaatgatttccaaaacaaaagaacatttataaatgatgacttg-ttcaatatt |
33722702 |
T |
|
| Q |
214 |
gtctcgag |
221 |
Q |
| |
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|||||||| |
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| T |
33722701 |
gtctcgag |
33722694 |
T |
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