View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16751_low_1 (Length: 1188)

Name: NF16751_low_1
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16751_low_1
NF16751_low_1
[»] chr2 (63 HSPs)
chr2 (10-1169)||(10618544-10619703)
chr2 (659-801)||(32592537-32592683)
chr2 (598-803)||(26201976-26202186)
chr2 (671-803)||(43279514-43279649)
chr2 (605-753)||(20952358-20952506)
chr2 (598-733)||(15305697-15305832)
chr2 (761-864)||(36114306-36114409)
chr2 (422-512)||(44439230-44439324)
chr2 (703-809)||(42868483-42868589)
chr2 (598-867)||(2416197-2416471)
chr2 (620-753)||(15757592-15757725)
chr2 (598-695)||(30331812-30331909)
chr2 (816-867)||(1633691-1633742)
chr2 (430-512)||(3476452-3476535)
chr2 (755-830)||(4026738-4026813)
chr2 (327-422)||(36307044-36307139)
chr2 (601-695)||(42419854-42419948)
chr2 (761-831)||(42420374-42420444)
chr2 (428-511)||(42982523-42982608)
chr2 (358-494)||(4894099-4894244)
chr2 (327-416)||(11759770-11759859)
chr2 (815-867)||(12795666-12795718)
chr2 (441-513)||(22535977-22536049)
chr2 (621-800)||(41851486-41851670)
chr2 (342-414)||(42774783-42774854)
chr2 (602-742)||(45229525-45229665)
chr2 (599-742)||(4606939-4607082)
chr2 (659-788)||(16451088-16451215)
chr2 (671-745)||(36125372-36125446)
chr2 (428-494)||(42740975-42741041)
chr2 (422-479)||(33961996-33962053)
chr2 (430-530)||(2002718-2002818)
chr2 (329-405)||(4007116-4007192)
chr2 (604-640)||(7103391-7103427)
chr2 (441-497)||(12037056-12037112)
chr2 (761-809)||(12464553-12464601)
chr2 (602-686)||(27317449-27317533)
chr2 (436-512)||(33019185-33019261)
chr2 (428-513)||(37420216-37420303)
chr2 (760-867)||(43570300-43570405)
chr2 (761-800)||(423773-423812)
chr2 (331-366)||(5973619-5973654)
chr2 (599-646)||(7928211-7928258)
chr2 (760-867)||(9395014-9395121)
chr2 (327-410)||(12110918-12111001)
chr2 (753-808)||(13325513-13325568)
chr2 (471-513)||(21743814-21743857)
chr2 (328-422)||(680203-680296)
chr2 (598-640)||(1830155-1830197)
chr2 (428-494)||(3352074-3352140)
chr2 (326-412)||(6767764-6767850)
chr2 (659-753)||(12289800-12289894)
chr2 (428-478)||(16488342-16488392)
chr2 (760-806)||(18962117-18962163)
chr2 (761-855)||(42457844-42457938)
chr2 (688-733)||(1633494-1633539)
chr2 (766-803)||(2195909-2195946)
chr2 (814-867)||(15757809-15757862)
chr2 (704-753)||(40279270-40279319)
chr2 (704-753)||(40279340-40279389)
chr2 (704-753)||(40279410-40279459)
chr2 (761-798)||(40835487-40835524)
chr2 (602-683)||(44590097-44590178)
[»] chr6 (47 HSPs)
chr6 (422-513)||(1485161-1485252)
chr6 (362-571)||(34620807-34621025)
chr6 (362-571)||(34748244-34748462)
chr6 (428-570)||(2234437-2234579)
chr6 (759-867)||(264255-264363)
chr6 (598-723)||(848022-848146)
chr6 (327-422)||(1499979-1500074)
chr6 (422-506)||(30926793-30926878)
chr6 (327-482)||(9505780-9505944)
chr6 (762-829)||(4163097-4163164)
chr6 (762-829)||(4224718-4224785)
chr6 (430-573)||(5724653-5724796)
chr6 (422-496)||(34898691-34898766)
chr6 (600-744)||(35070568-35070708)
chr6 (759-829)||(9093634-9093704)
chr6 (605-679)||(10645304-10645378)
chr6 (468-530)||(35098235-35098297)
chr6 (340-405)||(7953079-7953144)
chr6 (329-413)||(46201-46285)
chr6 (329-413)||(765298-765382)
chr6 (431-479)||(10874507-10874555)
chr6 (329-404)||(3436796-3436871)
chr6 (428-482)||(31305868-31305922)
chr6 (598-686)||(6538584-6538672)
chr6 (761-809)||(8147644-8147692)
chr6 (759-863)||(9559619-9559723)
chr6 (761-809)||(24626237-24626285)
chr6 (441-513)||(26280584-26280656)
chr6 (765-809)||(31623502-31623546)
chr6 (598-686)||(34404638-34404726)
chr6 (761-809)||(35070710-35070758)
chr6 (421-512)||(852512-852603)
chr6 (358-413)||(882774-882829)
chr6 (327-422)||(3525004-3525099)
chr6 (344-419)||(22692639-22692714)
chr6 (441-570)||(10400729-10400859)
chr6 (329-375)||(20871627-20871673)
chr6 (600-634)||(30536879-30536913)
chr6 (442-510)||(3436917-3436986)
chr6 (428-513)||(4910887-4910972)
chr6 (452-512)||(6544543-6544604)
chr6 (436-513)||(6654119-6654196)
chr6 (704-741)||(31624959-31624996)
chr6 (760-789)||(31671153-31671182)
chr6 (761-830)||(33117463-33117532)
chr6 (428-465)||(34027438-34027475)
chr6 (599-656)||(35069525-35069582)
[»] chr3 (71 HSPs)
chr3 (329-491)||(35264324-35264495)
chr3 (430-513)||(35058340-35058423)
chr3 (601-861)||(402457-402721)
chr3 (331-512)||(37334949-37335139)
chr3 (605-809)||(20880419-20880627)
chr3 (422-513)||(36302162-36302253)
chr3 (422-513)||(44958621-44958712)
chr3 (671-745)||(30443904-30443978)
chr3 (333-389)||(50427184-50427240)
chr3 (659-781)||(21367637-21367764)
chr3 (598-753)||(39980732-39980887)
chr3 (609-723)||(31365111-31365225)
chr3 (422-513)||(30301013-30301105)
chr3 (435-507)||(40147878-40147950)
chr3 (335-422)||(584712-584799)
chr3 (759-829)||(34638042-34638113)
chr3 (665-803)||(36631030-36631173)
chr3 (671-829)||(43062618-43062776)
chr3 (329-411)||(31766160-31766242)
chr3 (328-422)||(32112073-32112167)
chr3 (769-867)||(34235164-34235262)
chr3 (597-750)||(901930-902082)
chr3 (358-490)||(3776524-3776665)
chr3 (329-405)||(42644302-42644379)
chr3 (421-482)||(51285580-51285641)
chr3 (453-513)||(7717367-7717427)
chr3 (759-867)||(31403242-31403350)
chr3 (438-513)||(41115392-41115468)
chr3 (422-466)||(46853549-46853593)
chr3 (603-686)||(9832672-9832755)
chr3 (422-512)||(25359589-25359679)
chr3 (609-695)||(31365232-31365318)
chr3 (344-410)||(52925551-52925617)
chr3 (340-413)||(1441331-1441404)
chr3 (604-649)||(25447163-25447208)
chr3 (344-405)||(25577696-25577757)
chr3 (761-867)||(30956706-30956822)
chr3 (761-867)||(30972518-30972634)
chr3 (605-680)||(32582816-32582888)
chr3 (761-809)||(24684903-24684951)
chr3 (329-393)||(30958145-30958209)
chr3 (329-393)||(30973957-30974021)
chr3 (600-679)||(42799880-42799960)
chr3 (815-867)||(42800057-42800109)
chr3 (327-391)||(42913164-42913228)
chr3 (327-359)||(49356304-49356336)
chr3 (812-867)||(1508722-1508777)
chr3 (441-571)||(3845148-3845276)
chr3 (441-512)||(5406886-5406957)
chr3 (598-649)||(16072953-16073004)
chr3 (328-403)||(25620179-25620254)
chr3 (815-866)||(31365416-31365467)
chr3 (755-829)||(34632131-34632206)
chr3 (600-695)||(42545312-42545407)
chr3 (441-496)||(52364047-52364102)
chr3 (422-472)||(23187865-23187915)
chr3 (346-404)||(24916581-24916639)
chr3 (328-422)||(25129451-25129545)
chr3 (429-499)||(27499383-27499453)
chr3 (332-422)||(41591269-41591359)
chr3 (344-414)||(48089618-48089688)
chr3 (674-743)||(13715560-13715629)
chr3 (607-648)||(26911699-26911740)
chr3 (608-649)||(33405114-33405155)
chr3 (605-686)||(34610725-34610806)
chr3 (660-725)||(37689261-37689325)
chr3 (327-396)||(44958553-44958622)
chr3 (760-828)||(46030911-46030980)
chr3 (328-365)||(49158656-49158693)
chr3 (440-512)||(51167846-51167919)
chr3 (327-416)||(53567961-53568050)
[»] chr4 (75 HSPs)
chr4 (602-753)||(54426046-54426197)
chr4 (601-753)||(17822780-17822932)
chr4 (663-867)||(50662715-50662918)
chr4 (600-753)||(21731570-21731723)
chr4 (422-482)||(33843987-33844047)
chr4 (428-531)||(32818391-32818494)
chr4 (342-512)||(55927696-55927875)
chr4 (601-745)||(26780-26923)
chr4 (600-732)||(25904137-25904269)
chr4 (613-745)||(29657395-29657527)
chr4 (601-753)||(53294029-53294181)
chr4 (428-571)||(2635084-2635227)
chr4 (327-422)||(43868215-43868310)
chr4 (761-867)||(3155487-3155593)
chr4 (329-513)||(22250205-22250398)
chr4 (604-680)||(8705017-8705093)
chr4 (422-482)||(37439155-37439215)
chr4 (605-753)||(39603090-39603237)
chr4 (428-551)||(35065004-35065127)
chr4 (772-867)||(26982-27079)
chr4 (428-513)||(2206364-2206450)
chr4 (607-725)||(22030234-22030352)
chr4 (329-411)||(38740287-38740369)
chr4 (761-867)||(44863042-44863148)
chr4 (642-803)||(50681045-50681211)
chr4 (441-482)||(8330126-8330167)
chr4 (428-512)||(30357492-30357576)
chr4 (604-743)||(2244064-2244203)
chr4 (422-473)||(4243406-4243457)
chr4 (671-750)||(7839346-7839425)
chr4 (422-512)||(18597019-18597110)
chr4 (419-509)||(33843661-33843756)
chr4 (603-753)||(40830947-40831096)
chr4 (761-867)||(11389410-11389516)
chr4 (327-413)||(20911810-20911896)
chr4 (428-493)||(1048716-1048781)
chr4 (712-800)||(9760391-9760484)
chr4 (421-482)||(10185204-10185265)
chr4 (604-725)||(13126494-13126615)
chr4 (606-695)||(15173223-15173312)
chr4 (699-867)||(44138443-44138616)
chr4 (327-391)||(24364103-24364167)
chr4 (598-646)||(25571369-25571417)
chr4 (599-695)||(42403936-42404031)
chr4 (422-572)||(45329766-45329918)
chr4 (327-391)||(48575494-48575558)
chr4 (327-402)||(5835778-5835853)
chr4 (441-512)||(16643958-16644029)
chr4 (344-415)||(17898057-17898127)
chr4 (432-479)||(20712664-20712710)
chr4 (759-806)||(25885804-25885851)
chr4 (603-694)||(29774302-29774393)
chr4 (441-512)||(51093238-51093309)
chr4 (675-742)||(55302263-55302330)
chr4 (347-405)||(1023849-1023907)
chr4 (428-478)||(2206850-2206900)
chr4 (432-494)||(9064229-9064291)
chr4 (600-634)||(22662165-22662199)
chr4 (600-634)||(22666644-22666678)
chr4 (599-649)||(27043743-27043793)
chr4 (471-513)||(29779118-29779160)
chr4 (335-409)||(35122301-35122375)
chr4 (761-803)||(43505904-43505946)
chr4 (765-803)||(44797834-44797872)
chr4 (761-803)||(51630059-51630101)
chr4 (431-513)||(55639744-55639826)
chr4 (430-494)||(2206515-2206580)
chr4 (344-405)||(2206622-2206683)
chr4 (598-631)||(20109139-20109172)
chr4 (599-724)||(24169295-24169420)
chr4 (325-362)||(25405729-25405766)
chr4 (598-750)||(43505940-43506093)
chr4 (452-573)||(48045746-48045867)
chr4 (331-404)||(50945390-50945463)
chr4 (659-732)||(55064859-55064932)
[»] chr8 (54 HSPs)
chr8 (329-551)||(32927833-32928064)
chr8 (600-809)||(35534527-35534738)
chr8 (599-742)||(30251367-30251510)
chr8 (342-538)||(26100072-26100278)
chr8 (330-393)||(7602042-7602105)
chr8 (642-745)||(26771276-26771379)
chr8 (598-680)||(43717846-43717928)
chr8 (712-864)||(30657798-30657944)
chr8 (426-512)||(4554314-4554401)
chr8 (642-745)||(18133667-18133770)
chr8 (329-423)||(10368043-10368137)
chr8 (428-526)||(13418840-13418938)
chr8 (598-803)||(35643900-35644103)
chr8 (326-423)||(3206135-3206231)
chr8 (341-422)||(28805254-28805335)
chr8 (327-379)||(1820460-1820512)
chr8 (327-379)||(1854905-1854957)
chr8 (598-686)||(32840898-32840986)
chr8 (327-422)||(9461450-9461544)
chr8 (599-801)||(10758170-10758376)
chr8 (622-801)||(35749506-35749684)
chr8 (331-385)||(4336571-4336625)
chr8 (346-416)||(4950568-4950638)
chr8 (428-494)||(13384675-13384741)
chr8 (327-365)||(18355760-18355798)
chr8 (600-685)||(38602400-38602483)
chr8 (329-422)||(18123305-18123398)
chr8 (659-752)||(37945600-37945693)
chr8 (343-411)||(1373081-1373149)
chr8 (432-468)||(3478728-3478764)
chr8 (441-497)||(15677850-15677906)
chr8 (345-385)||(30706283-30706323)
chr8 (335-423)||(38516328-38516416)
chr8 (428-512)||(38868478-38868562)
chr8 (422-513)||(16972079-16972170)
chr8 (422-512)||(38203265-38203356)
chr8 (601-752)||(38648355-38648506)
chr8 (597-744)||(43045636-43045783)
chr8 (329-375)||(26559864-26559910)
chr8 (628-753)||(28763371-28763496)
chr8 (329-391)||(32994153-32994215)
chr8 (327-365)||(35550309-35550347)
chr8 (759-829)||(37444493-37444563)
chr8 (439-513)||(37684384-37684458)
chr8 (327-405)||(38715192-38715270)
chr8 (759-825)||(41475138-41475204)
chr8 (430-531)||(4662926-4663027)
chr8 (790-867)||(5404501-5404578)
chr8 (328-381)||(5893332-5893385)
chr8 (430-515)||(8693738-8693823)
chr8 (760-829)||(16210965-16211034)
chr8 (603-644)||(26479897-26479938)
chr8 (350-391)||(32681238-32681279)
chr8 (704-789)||(39881770-39881855)
[»] chr7 (56 HSPs)
chr7 (378-496)||(41788312-41788439)
chr7 (432-512)||(27571842-27571922)
chr7 (606-695)||(34464141-34464230)
chr7 (428-532)||(45004980-45005084)
chr7 (329-551)||(40491519-40491750)
chr7 (435-513)||(5489874-5489952)
chr7 (603-725)||(19302480-19302602)
chr7 (599-803)||(48469992-48470201)
chr7 (762-873)||(20881717-20881828)
chr7 (601-695)||(4970707-4970801)
chr7 (344-422)||(40795917-40795995)
chr7 (421-494)||(30182310-30182383)
chr7 (620-745)||(33601344-33601469)
chr7 (428-497)||(38123687-38123756)
chr7 (343-395)||(39734639-39734691)
chr7 (761-809)||(46078089-46078137)
chr7 (659-741)||(420375-420457)
chr7 (358-513)||(15050271-15050436)
chr7 (605-742)||(20526460-20526597)
chr7 (329-426)||(42481803-42481900)
chr7 (329-405)||(35105254-35105330)
chr7 (812-864)||(38500059-38500111)
chr7 (659-750)||(11619131-11619222)
chr7 (761-800)||(20269527-20269566)
chr7 (659-750)||(21568468-21568559)
chr7 (358-413)||(29829311-29829366)
chr7 (765-867)||(39279646-39279749)
chr7 (328-406)||(48158913-48158991)
chr7 (659-753)||(19022558-19022652)
chr7 (817-867)||(27863843-27863893)
chr7 (761-803)||(28613614-28613656)
chr7 (613-753)||(45790357-45790492)
chr7 (647-732)||(38499874-38499959)
chr7 (335-391)||(597862-597918)
chr7 (428-512)||(1410942-1411026)
chr7 (815-867)||(21568772-21568824)
chr7 (597-649)||(33673184-33673236)
chr7 (428-512)||(41386836-41386920)
chr7 (761-800)||(11700346-11700385)
chr7 (421-512)||(23441244-23441335)
chr7 (812-867)||(40196251-40196306)
chr7 (422-496)||(597961-598034)
chr7 (659-753)||(19214379-19214473)
chr7 (659-733)||(28614456-28614530)
chr7 (443-493)||(28725088-28725138)
chr7 (603-649)||(44822065-44822111)
chr7 (755-801)||(45004716-45004762)
chr7 (703-745)||(46280289-46280331)
chr7 (327-404)||(5489781-5489857)
chr7 (421-510)||(23458041-23458130)
chr7 (672-745)||(30570917-30570990)
chr7 (372-413)||(35222074-35222115)
chr7 (598-683)||(36517650-36517735)
chr7 (761-834)||(40009387-40009460)
chr7 (344-409)||(44856719-44856784)
chr7 (761-798)||(45264048-45264085)
[»] chr5 (60 HSPs)
chr5 (606-733)||(9107113-9107240)
chr5 (604-867)||(9202666-9202934)
chr5 (599-742)||(7705911-7706054)
chr5 (599-745)||(12857251-12857397)
chr5 (599-745)||(12857618-12857764)
chr5 (603-753)||(16937800-16937950)
chr5 (600-732)||(10639977-10640109)
chr5 (329-411)||(14299416-14299498)
chr5 (759-860)||(12425462-12425563)
chr5 (606-855)||(39105360-39105615)
chr5 (642-803)||(16457935-16458100)
chr5 (605-750)||(32009698-32009844)
chr5 (659-803)||(29925789-29925938)
chr5 (436-513)||(34250380-34250457)
chr5 (671-756)||(37954686-37954771)
chr5 (600-803)||(42500157-42500347)
chr5 (767-867)||(1465105-1465205)
chr5 (441-512)||(3738142-3738213)
chr5 (599-808)||(39594751-39594964)
chr5 (421-482)||(24306110-24306171)
chr5 (421-482)||(24367145-24367206)
chr5 (428-513)||(42858087-42858172)
chr5 (771-867)||(28776859-28776955)
chr5 (600-732)||(40426789-40426921)
chr5 (659-725)||(3735131-3735197)
chr5 (422-570)||(10898644-10898791)
chr5 (468-510)||(14299723-14299765)
chr5 (761-867)||(19460466-19460572)
chr5 (599-649)||(35299872-35299922)
chr5 (598-743)||(3932588-3932733)
chr5 (704-836)||(4014442-4014579)
chr5 (428-513)||(36639916-36640001)
chr5 (759-832)||(42569058-42569131)
chr5 (344-404)||(5465398-5465458)
chr5 (760-828)||(7674571-7674639)
chr5 (761-801)||(14932240-14932280)
chr5 (473-513)||(29922035-29922075)
chr5 (761-809)||(35445997-35446045)
chr5 (761-864)||(465841-465944)
chr5 (327-382)||(707644-707699)
chr5 (327-374)||(4848064-4848111)
chr5 (328-423)||(4975053-4975147)
chr5 (328-423)||(6095243-6095338)
chr5 (766-809)||(9107054-9107097)
chr5 (327-422)||(14671104-14671198)
chr5 (602-637)||(29336749-29336784)
chr5 (340-403)||(35138947-35139010)
chr5 (469-512)||(35139093-35139136)
chr5 (441-532)||(43310574-43310665)
chr5 (340-422)||(117420-117502)
chr5 (327-365)||(2124244-2124282)
chr5 (761-803)||(37112338-37112380)
chr5 (761-866)||(39247984-39248090)
chr5 (699-753)||(43300881-43300935)
chr5 (457-513)||(7667588-7667645)
chr5 (425-494)||(18585325-18585394)
chr5 (441-513)||(33608482-33608555)
chr5 (620-685)||(35445778-35445843)
chr5 (441-482)||(36927744-36927785)
chr5 (601-634)||(40335788-40335821)
[»] chr1 (65 HSPs)
chr1 (422-512)||(10324953-10325043)
chr1 (611-753)||(49938750-49938892)
chr1 (329-490)||(3515820-3515979)
chr1 (761-867)||(30581686-30581792)
chr1 (604-753)||(3233933-3234082)
chr1 (601-745)||(2295107-2295251)
chr1 (432-536)||(6021760-6021864)
chr1 (666-809)||(37631539-37631687)
chr1 (428-531)||(28083909-28084012)
chr1 (679-809)||(47432038-47432172)
chr1 (813-867)||(6556892-6556946)
chr1 (765-855)||(9572192-9572282)
chr1 (659-745)||(51929512-51929598)
chr1 (435-532)||(47892416-47892513)
chr1 (422-494)||(20026179-20026251)
chr1 (331-482)||(33693031-33693172)
chr1 (812-867)||(5894294-5894349)
chr1 (327-422)||(11817228-11817323)
chr1 (605-867)||(27146174-27146434)
chr1 (620-803)||(29904707-29904887)
chr1 (329-405)||(13344837-13344913)
chr1 (601-745)||(14576569-14576712)
chr1 (663-743)||(15477578-15477658)
chr1 (661-753)||(17603359-17603451)
chr1 (704-829)||(15784257-15784381)
chr1 (422-497)||(28287351-28287426)
chr1 (812-867)||(33541849-33541904)
chr1 (599-686)||(38001665-38001752)
chr1 (812-867)||(47498974-47499029)
chr1 (816-867)||(51688579-51688630)
chr1 (659-753)||(473167-473260)
chr1 (422-512)||(7790657-7790747)
chr1 (327-365)||(22548210-22548248)
chr1 (428-566)||(24587835-24587976)
chr1 (605-683)||(37617384-37617462)
chr1 (329-367)||(47899387-47899425)
chr1 (329-422)||(7524192-7524285)
chr1 (455-512)||(10325076-10325133)
chr1 (428-497)||(11049245-11049314)
chr1 (814-867)||(15477443-15477496)
chr1 (345-422)||(15514998-15515075)
chr1 (427-472)||(29759632-29759677)
chr1 (441-494)||(48549046-48549099)
chr1 (761-809)||(30582028-30582076)
chr1 (600-743)||(33186318-33186462)
chr1 (327-367)||(38512453-38512493)
chr1 (343-410)||(4347033-4347100)
chr1 (779-834)||(15942250-15942305)
chr1 (760-827)||(23544719-23544786)
chr1 (344-423)||(28464923-28465002)
chr1 (335-422)||(35961447-35961534)
chr1 (324-375)||(49537195-49537246)
chr1 (605-684)||(50644174-50644253)
chr1 (422-464)||(213552-213594)
chr1 (428-497)||(6574175-6574245)
chr1 (598-640)||(26184859-26184901)
chr1 (440-506)||(29964085-29964151)
chr1 (428-494)||(34387714-34387780)
chr1 (444-513)||(3016142-3016210)
chr1 (422-463)||(17284125-17284166)
chr1 (350-423)||(26382761-26382834)
chr1 (441-551)||(31362239-31362345)
chr1 (329-422)||(32369944-32370037)
chr1 (659-732)||(37473427-37473500)
chr1 (598-687)||(38247396-38247485)
[»] scaffold0361 (1 HSPs)
scaffold0361 (346-513)||(14044-14219)
[»] scaffold0024 (2 HSPs)
scaffold0024 (712-829)||(21311-21426)
scaffold0024 (759-803)||(58885-58929)
[»] scaffold0221 (1 HSPs)
scaffold0221 (675-742)||(22245-22312)
[»] scaffold0172 (1 HSPs)
scaffold0172 (327-410)||(15240-15323)


Alignment Details
Target: chr2 (Bit Score: 1132; Significance: 0; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 1132; E-Value: 0
Query Start/End: Original strand, 10 - 1169
Target Start/End: Original strand, 10618544 - 10619703
Alignment:
Q  10 catcatcaacctctgcaacaccgcagaacttgcattcatctgattctgaagcaacggccccaaacaagtccccggatgaactgcaaccacatccacaccg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10618544 catcatcaacctctgcaacaccgcagaacttgcattcatctgattctgaagcaacggccccaaacaagtccctggatgaactgcaaccacatccacaccg 10618643  T
Q  110 ctgtgtttctcacaaaactcccacgccgccttctccgcctccgttttcgacacgggataccacttccccctcaacttacagtactcaacatcagtccacg 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618644 ctgtgtttctcacaaaactcccacgccaccttctccgcctccgttttcgacacgggataccacttccccctcaacttacagtactcaacatcagtccacg 10618743  T
Q  210 acccctcgtcaatcgccttgttttccggccaattagggtttggtacctgttggagggacaaatttacttgtacttttataaataaataaatatgcaagaa 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618744 acccctcgtcaatcgccttgttttccggccaattagggtttggtacctgttggagggacaaatttacttgtacttttataaataaataaatatgcaagaa 10618843  T
Q  310 tggctaaaagtatgtttaaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618844 tggctaaaagtatgtttaaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 10618943  T
Q  410 catttatataaaaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatca 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618944 catttatataaaaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatca 10619043  T
Q  510 attcaagtggaaagcaaccaaacttgttatactcaattctaccgctatagaatcaattttggcctagtagaagtgagcaaacatatactagggcctgttt 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619044 attcaagtggaaagcaaccaaacttgttatactcaattctaccgctatagaatcaattttggcctagtagaagtgagcaaacatatactagggcctgttt 10619143  T
Q  610 ggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttca 709  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619144 ggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttca 10619243  T
Q  710 gcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619244 gcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgta 10619343  T
Q  810 tgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaagcatttaagtgcatggatgatattgagaacagtaccatggct 909  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619344 tgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaagcatttaagtgcatggatgatattgagaacagtaccatggct 10619443  T
Q  910 gaaatggaggatgtaagaaccacgcgcttcacacccgcgcgttttgatgcttctagaacgttaagcgttccttgtacagcgggttccagaagttcctttt 1009  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619444 gaaatggaggatgtaagaaccacgcgcttcacacccgcgcgttttgatgcttctagaacgttaagcgttccttgtacagcgggttccagaagttcctttt 10619543  T
Q  1010 gtggatcggttgggtcttcgagagtgcatggggaagcgacatggaagacaccggaacaaccgttgatggcgtttgagacggcggtggagtcgaggatgtt 1109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619544 gtggatcggttgggtcttcgagagtgcatggggaagcgacatggaagacaccggaacaaccgttgatggcgtttgagacggcggtggagtcgaggatgtt 10619643  T
Q  1110 aacggggaagatggtgatgcgagattgggcttcgtggtggagtgtgaaaagatgagatgg 1169  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10619644 aacggggaagatggtgatgcgagattgggcttcggggtggagtgtgaaaagatgagatgg 10619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 659 - 801
Target Start/End: Complemental strand, 32592683 - 32592537
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt----- 753  Q
    ||||||||||| ||||||| |||||| | ||||||||   ||| ||| ||| ||||||||||||||| ||||||| | ||||||||| |||||||         
T  32592683 ttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagc 32592584  T
Q  754 gtatgcgaaaacaatttaactttgttttatctttttctataaaaatag 801  Q
    |||| | ||||||||||||| || ||||||||||||||||||||||||    
T  32592583 gtatac-aaaacaatttaacattattttatctttttctataaaaatag 32592537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 598 - 803
Target Start/End: Complemental strand, 26202186 - 26201976
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    ||||||||||||||||| ||| ||||||  ||||||  ||||| ||||||||  ||| || |||  |||| | |||| |||| |||||| ||||||||      
T  26202186 tagggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcat 26202087  T
Q  698 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta----tgcgaaaacaatttaactttgttttatct-ttttcta 792  Q
     ||| ||||||| ||||||||||||||| ||||||| || |||||||| ||||||| ||    | ||| | ||||||||| || |||||||| ||| |||    
T  26202086 aagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatagcagtacgagaccaatttaacgttattttatctctttgcta 26201987  T
Q  793 taaaaatagct 803  Q
    |||||||||||    
T  26201986 taaaaatagct 26201976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 671 - 803
Target Start/End: Original strand, 43279514 - 43279649
Alignment:
Q  671 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt---gtatgcgaaaacaa 767  Q
    |||||||||||||||| ||||||||   ||| ||||||| |||||||||| |||| ||||||| ||||||||||| |||||||   | || | |||||||    
T  43279514 atgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagcatacaaaaacaa 43279613  T
Q  768 tttaactttgttttatctttttctataaaaatagct 803  Q
    ||| || || |||||||||||  |||||||||||||    
T  43279614 tttcacattattttatcttttgatataaaaatagct 43279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 605 - 753
Target Start/End: Complemental strand, 20952506 - 20952358
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 704  Q
    |||||||||||||| ||||||| |||| || || || ||||||||  |||||  ||  ||||||| |||||||||| ||||| ||||||||   | | ||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  705 tttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||| ||||||||||||||| ||||||| ||||| ||||| |||||||    
T  20952406 tttcaacttattttcataagttctccaatatagctaataaaaacaactt 20952358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 598 - 733
Target Start/End: Complemental strand, 15305832 - 15305697
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    |||||||||||||||||| || ||||||| ||||||||||||| ||||||||  | |||  |||| ||||||  ||| |||| |||||| ||||||||      
T  15305832 tagggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcat 15305733  T
Q  698 gagcatttttcagcttattttcataagtactccaat 733  Q
     ||  ||||||| ||||||||||||||| |||||||    
T  15305732 aagtttttttcaacttattttcataagttctccaat 15305697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 761 - 864
Target Start/End: Complemental strand, 36114409 - 36114306
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    |||||||||||||||| |||||||||||   ||||||||||||||| ||| ||| ||||||||||||| ||| | |||||||| || ||||||| || ||    
T  36114409 aaaacaatttaactttattttatcttttgtcataaaaatagctaatatataagcacttatcatgataaacacgtgtactataagctgcaaataacctatt 36114310  T
Q  861 tatc 864  Q
    ||||    
T  36114309 tatc 36114306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 44439324 - 44439230
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaa---ttctaaaggcaaaatcaatt 512  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| || || |||||||||  |||||||||   ||||| ||||||||||||||    
T  44439324 aacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaaattttagcttcaagttagaatcaattcttctagaggcaaaatcaatt 44439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 703 - 809
Target Start/End: Original strand, 42868483 - 42868589
Alignment:
Q  703 tttttcagcttattttcataagtactccaatctagcttataaacacaacttg-tatgcgaaaacaatttaactttgttttatctttttctataaaaatag 801  Q
    ||||||||||||||||||||||| ||||||| || |||| ||| | | |||  ||| | |||||||||||||||| |||||||||||||||| |||||||    
T  42868483 tttttcagcttattttcataagttctccaatataacttacaaa-atagcttaatatacaaaaacaatttaactttattttatctttttctatgaaaatag 42868581  T
Q  802 ctaatgta 809  Q
    || |||||    
T  42868582 cttatgta 42868589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 598 - 867
Target Start/End: Complemental strand, 2416471 - 2416197
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    |||||| ||||| |||||||| ||||||||||||||| | ||| ||||||||  | ||| ||||| |||||| || |||||||||| ||||| | ||| |    
T  2416471 tagggcatgtttagattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcac 2416372  T
Q  698 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttcta 792  Q
     |||   ||||||| || |||||||||| |||  || || |||||||| ||| |||      |||   |||||||||||||||  ||||||||||| |||    
T  2416371 aagctaatttcagcatactttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgcta 2416272  T
Q  793 taaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
     | ||||| || ||  || ||| |||| ||||||||| |||| | |||||| ||  ||||||| |||||||||||    
T  2416271 cagaaataacttatacataagcacttaacatgataagaacttgtgctataagctgaaaataagttgtttatccaa 2416197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 620 - 753
Target Start/End: Original strand, 15757592 - 15757725
Alignment:
Q  620 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttc 719  Q
    ||||||| |||| || || || ||||||||  ||||| |||||||||| | |||||||| ||||||| ||||||||   ||| |||||||||||||||||    
T  15757592 atttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattttc 15757691  T
Q  720 ataagtactccaatctagcttataaacacaactt 753  Q
    ||| || |||   | ||||||||||| |||||||    
T  15757692 atacgttctcttgtatagcttataaatacaactt 15757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 598 - 695
Target Start/End: Complemental strand, 30331909 - 30331812
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    |||||| |||||||||||||| |||| || ||||||| ||||| ||||||||  |||||  ||||||||||| ||||||| | |||||| ||||||||    
T  30331909 tagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttc 30331812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 816 - 867
Target Start/End: Original strand, 1633691 - 1633742
Alignment:
Q  816 cttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  1633691 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 1633742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 430 - 512
Target Start/End: Original strand, 3476452 - 3476535
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||| ||| ||||| |||| ||||||||||||||||||||| |||||| ||  |||||||||||||  ||||||||||||||    
T  3476452 atttgaatgtaaaaataaattctagaatcaaaagctctaatttttagctttaagttagaatcaattctggaggcaaaatcaatt 3476535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 755 - 830
Target Start/End: Complemental strand, 4026813 - 4026738
Alignment:
Q  755 tatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagc 830  Q
    ||||| |||| ||||||||||| ||||||||||| |||||||||||||| ||  || ||| |||||||||||||||    
T  4026813 tatgcaaaaataatttaactttattttatcttttgctataaaaatagcttatagataagcacttatcatgataagc 4026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 36307139 - 36307044
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||||||| || |||||||||||| ||||||||||||| | | ||||| ||| ||||| ||||||| | | ||||||||||  ||||||||||||    
T  36307139 aaaattgatcttgagtgaattgattatgtaaaattgattatggataaaagtgagttgaacgtaaagtaattgatgtttgtatgtatttatataaaa 36307044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 601 - 695
Target Start/End: Complemental strand, 42419948 - 42419854
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    ||||| |||||||||||| ||||||||||||||  ||||| |||||||   |||||  ||||||||||| | |||||||||||||| || |||||    
T  42419948 ggcctttttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttc 42419854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 761 - 831
Target Start/End: Original strand, 42420374 - 42420444
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagca 831  Q
    ||||||||||||| || ||||||||||| |||||||||||||| ||   | ||||||||||||||||||||    
T  42420374 aaaacaatttaacgttattttatcttttgctataaaaatagcttatacgtaagcgcttatcatgataagca 42420444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 428 - 511
Target Start/End: Complemental strand, 42982608 - 42982523
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatc--aattctaaaggcaaaatcaat 511  Q
    ||||||| |||| |||||||||| | ||||||||||||  ||||||||||||||| |||||||  ||||||  |||||||||||||    
T  42982608 aaatttgtgtgtaaaaatcaattctggaatcaaaagctacaatttctagcttcaagtagaatcaaaattctggaggcaaaatcaat 42982523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 358 - 494
Target Start/End: Original strand, 4894099 - 4894244
Alignment:
Q  358 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaa---------aacaacaaatttgagtgttaaaatcaa 448  Q
    |||||||||||||||||| | | ||||||||||||||| ||||||||  ||||||| || ||||         || || |||||||||| | | ||||||    
T  4894099 aattgattctagctaaaattaagttgaaggtaaagtgatttatgtttagatacattcatttaaaagtgacttgaataataaatttgagtataataatcaa 4894198  T
Q  449 ttatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    |||||||||||||||||   |||||||| ||||| | |||||||||    
T  4894199 ttatagaatcaaaagctacgatttctagtttcaagttgaatcaatt 4894244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 327 - 416
Target Start/End: Original strand, 11759770 - 11759859
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttat 416  Q
    |||||||| ||| |||||||||||||||||||||||||| |   ||||| ||| ||||||||||| ||  || |||||||||||| ||||    
T  11759770 aaaattgagtttgagtgaattgattttgtaaaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatacacttat 11759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 815 - 867
Target Start/End: Complemental strand, 12795718 - 12795666
Alignment:
Q  815 gcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||||||||||||||||| | ||||||||| ||||||| ||||||||||||    
T  12795718 gcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaa 12795666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 22536049 - 22535977
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||| |||| || |||||||||||  || |||||  ||||| ||||||||||||||||||||||||||||||    
T  22536049 aaaattaattctaaaatcaaaagcttcaaattctaaattcaagtagaatcaattctaaaggcaaaatcaattc 22535977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 621 - 800
Target Start/End: Complemental strand, 41851670 - 41851486
Alignment:
Q  621 tttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttca 720  Q
    |||||| ||||||||||||| ||||||||  |||||  ||||||||| | ||| ||||| |||||| || |||||   ||| ||| |||||||| |||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttca 41851571  T
Q  721 taagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaata 800  Q
    ||| | ||||||  |||||| | || |||||||      ||| | |||||||||||||||| || |||||||| ||||| |||||    
T  41851570 taaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaactttattgtatcttttcctatataaata 41851486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 342 - 414
Target Start/End: Original strand, 42774783 - 42774854
Alignment:
Q  342 tgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacattt 414  Q
    ||||||||||||||||||||||||||  |||||||| | ||||||||||| ||  ||||||||| ||||||||    
T  42774783 tgaattgattttgtaaaattgattctgactaaaaataagttgaaggtaaaatggtttatgtttg-atacattt 42774854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 602 - 742
Target Start/End: Complemental strand, 45229665 - 45229525
Alignment:
Q  602 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagc 701  Q
    ||||||||||||||  | ||||||| ||||||| || || ||||| ||| | ||   ||||||||||| ||||||| | |||||| || |||||   |||    
T  45229665 gcctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagc 45229566  T
Q  702 atttttcagcttattttcataagtactccaatctagcttat 742  Q
     ||||||||||||||||||||||| ||| ||  ||||||||    
T  45229565 ttttttcagcttattttcataagttctcgaagatagcttat 45229525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 599 - 742
Target Start/End: Complemental strand, 4607082 - 4606939
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||||||||||||||| || ||||||| |||||||   | | ||||||||  |||||  |||||||||||  |||||||| |||||| || | |||  |    
T  4607082 agggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatg 4606983  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttat 742  Q
    |||   ||| ||||||||||||||||| ||||||  ||||||||    
T  4606982 agctgcttttagcttattttcataagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 659 - 788
Target Start/End: Complemental strand, 16451215 - 16451088
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatg 758  Q
    ||||||||||| ||||||||| |||||| || | |||  ||||  |||||||||||||||||  ||| ||||||  |||||||  || ||| ||| |||     
T  16451215 ttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttatat- 16451117  T
Q  759 cgaaaacaatttaactttgttttatctttt 788  Q
     ||||||||||||||||  |||||||||||    
T  16451116 -gaaaacaatttaacttcattttatctttt 16451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 671 - 745
Target Start/End: Complemental strand, 36125446 - 36125372
Alignment:
Q  671 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    |||||||||||||||  ||||||||   ||| ||||| | ||||||||||||||| ||||||| |||||||||||    
T  36125446 atgaaaacagcttattgcaattttcgtaagctttttttaacttattttcataagttctccaatttagcttataaa 36125372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 428 - 494
Target Start/End: Complemental strand, 42741041 - 42740975
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    |||||||||||| |||||||||| ||||||||||||||  || |  ||||||||| |||||||||||    
T  42741041 aaatttgagtgtaaaaatcaattctagaatcaaaagctacaaatcttagcttcaagtagaatcaatt 42740975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 33961996 - 33962053
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagctt 479  Q
    ||||| |||||||||| | |||||||||||||||||||||| ||| |||||| |||||    
T  33961996 aacaataaatttgagtctaaaaatcaattatagaatcaaaaactccaatttcaagctt 33962053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 430 - 530
Target Start/End: Original strand, 2002718 - 2002818
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaacca 529  Q
    ||||| |||| |||||||||| |||||| |||| ||  || | |||||||||| ||||||||  |||  ||||||||||||||| | | |||||||||||    
T  2002718 atttgtgtgtaaaaatcaattttagaatgaaaaactacaaatcctagcttcaagtagaatcaggtctggaggcaaaatcaattctactagaaagcaacca 2002817  T
Q  530 a 530  Q
    |    
T  2002818 a 2002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 4007116 - 4007192
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||| |||| ||||||||||||||||||||| | | ||||| ||| ||||| | ||||| | |||||||||    
T  4007116 aattgattttaagtggattgattttgtaaaattgattatggataaaagtgagttgaatgaaaagtaatttatgtttg 4007192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 604 - 640
Target Start/End: Original strand, 7103391 - 7103427
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgaca 640  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7103391 ctgtttggattgacttatttgagtttatctattgaca 7103427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 12037112 - 12037056
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 497  Q
    |||||||||| ||||||||||||||  || || ||| ||||||||||||||||||||    
T  12037112 aaaatcaattgtagaatcaaaagctacaaattttagtttcaactagaatcaattcta 12037056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Original strand, 12464553 - 12464601
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    |||||||||||||||| ||||||||||||||| | |||||||| |||||    
T  12464553 aaaacaatttaactttattttatctttttctacagaaatagcttatgta 12464601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 602 - 686
Target Start/End: Complemental strand, 27317533 - 27317449
Alignment:
Q  602 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    ||||||||||||||||| ||||||| |||||||  |||| |||||||   |||||  ||| ||||||| ||||||||| ||||||    
T  27317533 gcctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 436 - 512
Target Start/End: Original strand, 33019185 - 33019261
Alignment:
Q  436 gtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||| |||||||||| || || ||||||||  || |||||||||||| || ||||||||||| ||||| ||||||||    
T  33019185 gtgtgaaaatcaattctaaaaccaaaagctacaaattctagcttcaaatataatcaattctagaggcagaatcaatt 33019261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 428 - 513
Target Start/End: Original strand, 37420216 - 37420303
Alignment:
Q  428 aaatttgagtgttaaaatcaattataga--atcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||||| |||||||||| ||||  || | |||||  | ||||||| ||| | |||||||||||||| |||||||||||||||    
T  37420216 aaatttgagtgtaaaaatcaattctagagaattagaagctacattttctagattctagtagaatcaattctagaggcaaaatcaattc 37420303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 760 - 867
Target Start/End: Complemental strand, 43570405 - 43570300
Alignment:
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgt 859  Q
    ||||||||||||||||  |||||| |||| ||||| || ||||| ||  |  ||||||||||||||||||  ||| | |||||| || ||||||||||||    
T  43570405 gaaaacaatttaacttcattttatattttactatagaattagcttataca--agcgcttatcatgataagtgcttgtgctataagctgcaaataagctgt 43570308  T
Q  860 ttatccaa 867  Q
    ||| ||||    
T  43570307 ttacccaa 43570300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 761 - 800
Target Start/End: Original strand, 423773 - 423812
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaata 800  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  423773 aaaacaatataacttagttttatctttttctataaaaata 423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 366
Target Start/End: Original strand, 5973619 - 5973654
Alignment:
Q  331 ttgatttttagtgaattgattttgtaaaattgattc 366  Q
    |||||||||| |||||||||||||||||||||||||    
T  5973619 ttgatttttaatgaattgattttgtaaaattgattc 5973654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 599 - 646
Target Start/End: Original strand, 7928211 - 7928258
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagtt 646  Q
    ||||||||||||||||| || ||||||| ||||||||||||| |||||    
T  7928211 agggcctgtttggattggcttatttgagcttatctattgacataagtt 7928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 760 - 867
Target Start/End: Complemental strand, 9395121 - 9395014
Alignment:
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgt 859  Q
    |||||||||||| |||| ||||||||||||||||| ||| | || ||  ||||| | |||||||||||||  ||| | |||||| |  |||||||||| |    
T  9395121 gaaaacaatttagctttattttatctttttctatagaaaaatcttatacatgagtgtttatcatgataagagcttgtgctataagccgcaaataagctat 9395022  T
Q  860 ttatccaa 867  Q
     |||||||    
T  9395021 gtatccaa 9395014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 410
Target Start/End: Complemental strand, 12111001 - 12110918
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 410  Q
    |||||||||||| |  ||||||||||||| ||||||||| | | ||||| ||| |||||  |||||||| ||||||||| ||||    
T  12111001 aaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 12110918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 753 - 808
Target Start/End: Complemental strand, 13325568 - 13325513
Alignment:
Q  753 tgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgt 808  Q
    ||||| |||||| ||||||||||| ||||||| |||||||||||| ||||| ||||    
T  13325568 tgtatacgaaaataatttaactttattttatcattttctataaaactagcttatgt 13325513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 471 - 513
Target Start/End: Original strand, 21743814 - 21743857
Alignment:
Q  471 ttctagcttcaacta-gaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  21743814 ttctagcttcaactaagaatcaagtctaaaggcaaaatcaattc 21743857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 680203 - 680296
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||||||||| |||||||||||| |||||| |||| |||  || ||| ||| ||||||||||||||  || |||||| ||||||| || |||||    
T  680203 aaattgattttgagtgaattgattatgtaaagttgagtctgtct-aaattgagttgaaggtaaagtgttttgtgtttgcatacattcatgtaaaa 680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 598 - 640
Target Start/End: Complemental strand, 1830197 - 1830155
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgaca 640  Q
    ||||||||||||||||||||| |||||||||||| || |||||    
T  1830197 tagggcctgtttggattgacttatttgagtttatttactgaca 1830155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 428 - 494
Target Start/End: Complemental strand, 3352140 - 3352074
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    ||||||| |||| |||||||||||||||||||||||||  |||| | | |||||| || ||||||||    
T  3352140 aaatttgtgtgtgaaaatcaattatagaatcaaaagctgcaattcccaacttcaagtaaaatcaatt 3352074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 412
Target Start/End: Complemental strand, 6767850 - 6767764
Alignment:
Q  326 taaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacat 412  Q
    ||||| ||||||| | | || ||||||||||||||||||| |   ||||||||| ||||| ||||||||| ||| |||| |||||||    
T  6767850 taaaaatgattttgaataaactgattttgtaaaattgattgtgattaaaaatgagttgaatgtaaagtgatttacgtttatatacat 6767764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 659 - 753
Target Start/End: Complemental strand, 12289894 - 12289800
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    |||||||||||  | ||||||| ||||| |||| |||   ||| ||||||| ||||||||||||||| ||||||| ||  ||||||| |||||||    
T  12289894 ttgggagaactattaaaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaactt 12289800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 428 - 478
Target Start/End: Complemental strand, 16488392 - 16488342
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagct 478  Q
    |||||||| ||||| |||||||| ||||||||| ||||| |||||||||||    
T  16488392 aaatttgattgttataatcaattctagaatcaacagctccaatttctagct 16488342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 760 - 806
Target Start/End: Original strand, 18962117 - 18962163
Alignment:
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagctaat 806  Q
    ||||||| ||||||||| |||||||||||  ||||||||||||||||    
T  18962117 gaaaacagtttaactttattttatcttttgttataaaaatagctaat 18962163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 761 - 855
Target Start/End: Complemental strand, 42457938 - 42457844
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataag 855  Q
    |||||||||||||||| ||||||||||| ||||| |||||| | ||  || |  ||||||||||||| || ||| | |||||| | |||||||||    
T  42457938 aaaacaatttaactttattttatcttttactatagaaatagattatacataaatgcttatcatgataggcgcttgtgctataagccacaaataag 42457844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 688 - 733
Target Start/End: Original strand, 1633494 - 1633539
Alignment:
Q  688 caattttctcgagcatttttcagcttattttcataagtactccaat 733  Q
    |||||||| | ||| ||||||||||||||||||||||| |||||||    
T  1633494 caattttcactagcctttttcagcttattttcataagttctccaat 1633539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 803
Target Start/End: Complemental strand, 2195946 - 2195909
Alignment:
Q  766 aatttaactttgttttatctttttctataaaaatagct 803  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  2195946 aatttaacttcattttatctttttctataaaaatagct 2195909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 814 - 867
Target Start/End: Original strand, 15757809 - 15757862
Alignment:
Q  814 cgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||| ||| | |||||| ||  |||||||||||||||||||    
T  15757809 cgcttatcatgataagcgcttgtgctataagctgaaaataagctgtttatccaa 15757862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 753
Target Start/End: Complemental strand, 40279319 - 40279270
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||| |||||||||||| ||||||| |||||||| || |||||||    
T  40279319 ttttcagctaattttcataagttctccaatatagcttatgaaaacaactt 40279270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 753
Target Start/End: Complemental strand, 40279389 - 40279340
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||| |||||||||||| ||||||| |||||||| || |||||||    
T  40279389 ttttcagctaattttcataagttctccaatatagcttatgaaaacaactt 40279340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 753
Target Start/End: Complemental strand, 40279459 - 40279410
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    |||||| ||||||||||||||| ||||||| |||||||| || |||||||    
T  40279459 ttttcaacttattttcataagttctccaatatagcttatgaaaacaactt 40279410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 798
Target Start/End: Complemental strand, 40835524 - 40835487
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaa 798  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  40835524 aaaacaattcaactctgttttatctttttctataaaaa 40835487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 602 - 683
Target Start/End: Complemental strand, 44590178 - 44590097
Alignment:
Q  602 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctt 683  Q
    |||| ||||||||| || |||||||||||||||| |||| ||||||||  ||||   |||  |||||| |||||||||||||    
T  44590178 gcctctttggattggcttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaacagctt 44590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 9e-30; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 1485161 - 1485252
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||    
T  1485161 aacaataaatttgagtgttaaaatcaattctagaatcaaaagctccaatttctagattcaagtagaatcaattctaaaggcaaaattaattc 1485252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 362 - 571
Target Start/End: Complemental strand, 34621025 - 34620807
Alignment:
Q  362 gattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaattat 452  Q
    |||||| |||| || ||| ||||||||||||||| ||||||||| |||||||||| |||||         | || |||||| ||||| |||||||||| |    
T  34621025 gattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattct 34620926  T
Q  453 agaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttatactcaattctacc 552  Q
    ||||||| ||||| | |||||||||||||  ||||||||||||   ||||||||| ||||| |||  | || |||||||| ||| | | ||||||||||     
T  34620925 agaatcagaagctatgatttctagcttcatgtagaatcaattccggaggcaaaattaattctagtttataggaaccaaacatgtcaaaatcaattctaca 34620826  T
Q  553 gctatagaatcaattttgg 571  Q
     || |||||||||||||||    
T  34620825 cctttagaatcaattttgg 34620807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 362 - 571
Target Start/End: Complemental strand, 34748462 - 34748244
Alignment:
Q  362 gattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaattat 452  Q
    |||||| |||| || ||| ||||||||||||||| ||||||||| |||||||||| |||||         | || |||||| ||||| |||||||||| |    
T  34748462 gattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattct 34748363  T
Q  453 agaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttatactcaattctacc 552  Q
    ||||||| ||||| | |||||||||||||  ||||||||||||   ||||||||| ||||| |||  | || |||||||| ||| | | ||||||||||     
T  34748362 agaatcagaagctatgatttctagcttcatgtagaatcaattccggaggcaaaattaattctagtttataggaaccaaacatgtcaaaatcaattctaca 34748263  T
Q  553 gctatagaatcaattttgg 571  Q
     || |||||||||||||||    
T  34748262 cctttagaatcaattttgg 34748244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 428 - 570
Target Start/End: Complemental strand, 2234579 - 2234437
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 527  Q
    ||||||||||||||||||||||| ||||||||||||||  | ||| ||||||||| | ||||||||| | |||||||||||||||| | | ||||| ||     
T  2234579 aaatttgagtgttaaaatcaattctagaatcaaaagcttcagtttttagcttcaagttgaatcaattttgaaggcaaaatcaattctactcgaaagtaat 2234480  T
Q  528 caaacttgttatactcaattctaccgctatagaatcaattttg 570  Q
    | ||| ||||  | ||| ||||||   ||||||||||||||||    
T  2234479 cgaacatgtttgaatcagttctacacttatagaatcaattttg 2234437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 759 - 867
Target Start/End: Complemental strand, 264363 - 264255
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 858  Q
    ||||||| |||||||||| ||||||||||| || || |||||||| || ||| ||| ||||||||||||||||||| | |||||| || ||||| |||||    
T  264363 cgaaaacgatttaactttattttatcttttgctttagaaatagcttatatataagcacttatcatgataagcacttgtgctataagctgcaaattagctg 264264  T
Q  859 tttatccaa 867  Q
    || ||||||    
T  264263 ttaatccaa 264255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 598 - 723
Target Start/End: Complemental strand, 848146 - 848022
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    |||||||||||||||||| || ||||||| |||||||| | || ||||||||  |||||  |||| |||||| || ||||| ||||||| || ||||||     
T  848146 tagggcctgtttggattgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttctt 848048  T
Q  698 gagcatttttcagcttattttcataa 723  Q
     ||| |||||||||||||||||||||    
T  848047 aagcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 1500074 - 1499979
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||||| | |||||||||||||||||||||||| | |||||||  || ||||  ||||| ||| ||||||||| |||||||||| |||||    
T  1500074 aaaattgattttgactgaattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatgtaaaa 1499979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 422 - 506
Target Start/End: Original strand, 30926793 - 30926878
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaa 506  Q
    ||||| |||||||||||| |||||||||| |||||| |||| ||| |||||||||||||||  ||||||| ||||||||| |||||    
T  30926793 aacaataaatttgagtgtaaaaatcaattctagaataaaaaactccaatttctagcttcaagttagaatccattctaaagccaaaa 30926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 482
Target Start/End: Complemental strand, 9505944 - 9505780
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---- 422  Q
    |||||||||||| | |||||||||| |||||| || ||| | ||||||| ||| ||||||| |||||||  ||||||  |||| ||| || |||||        
T  9505944 aaaattgattttgaatgaattgattctgtaaagtttattttggctaaaattgagttgaaggcaaagtgatatatgttattatatattcatgtaaaagtgt 9505845  T
Q  423 -----acaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
         |||| |||||||||| | ||||||||| |||||||||||||||| |||||||| ||||||    
T  9505844 gttgaacaataaatttgagtttaaaaatcaatcatagaatcaaaagctccaatttctatcttcaa 9505780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 762 - 829
Target Start/End: Complemental strand, 4163164 - 4163097
Alignment:
Q  762 aaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||| | || | |||||||||||||    
T  4163164 aaacaatttaactttattttatctatttctataaaaatagcttatgtgtaagtgtttatcatgataag 4163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 762 - 829
Target Start/End: Complemental strand, 4224785 - 4224718
Alignment:
Q  762 aaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||| | || | |||||||||||||    
T  4224785 aaacaatttaactttattttatctatttctataaaaatagcttatgtgtaagtgtttatcatgataag 4224718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 430 - 573
Target Start/End: Original strand, 5724653 - 5724796
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaacca 529  Q
    ||||| |||| ||||||||||||||||| ||||| |  || | |||||||||| ||||||||||| |  ||||||||||||||| |   ||||||| |||    
T  5724653 atttgtgtgtaaaaatcaattatagaataaaaagttacaaatcctagcttcaagtagaatcaattttggaggcaaaatcaattctacctgaaagcatcca 5724752  T
Q  530 aacttgttatactcaattctaccgctatagaatcaattttggcc 573  Q
    ||| ||| | | ||||||||||   | |||||| ||||||||||    
T  5724753 aacatgtcagaatcaattctacacttctagaattaattttggcc 5724796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 422 - 496
Target Start/End: Complemental strand, 34898766 - 34898691
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaag-ctctaatttctagcttcaactagaatcaattct 496  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||  ||||||||||||||||||| ||||||| |||||    
T  34898766 aacaataaattcgagtgttaaaatcaattctagaataaaaaaactctaatttctagcttcaagtagaatcgattct 34898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 600 - 744
Target Start/End: Original strand, 35070568 - 35070708
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    |||||||||||||||| || ||||||| ||| ||| || ||||||| |||  |||||    | ||||||| | |||||||||||||| |||||||| | |    
T  35070568 gggcctgtttggattggcttatttgagcttacctactggcacaagtcttgtgagact----gagagaacttacgaaaacagcttatgacaattttcacaa 35070663  T
Q  700 gcatttttcagcttattttcataagtactccaatctagcttataa 744  Q
    || |||||  |||| ||||||||||| ||||||  ||||||||||    
T  35070664 gcttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 759 - 829
Target Start/End: Original strand, 9093634 - 9093704
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    |||||||||||||||||| |||||||||||  |||| |||||||| ||  || ||||||||||||||||||    
T  9093634 cgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttatcatgataag 9093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 605 - 679
Target Start/End: Original strand, 10645304 - 10645378
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaaca 679  Q
    ||||||||||| || ||||||| ||||||| ||||| |||||||| ||||||  ||||||||||| |||||||||    
T  10645304 tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 468 - 530
Target Start/End: Original strand, 35098235 - 35098297
Alignment:
Q  468 aatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaa 530  Q
    ||||||||||||||| ||||||||||| |  ||||||||||||||| ||| ||||||||||||    
T  35098235 aatttctagcttcaattagaatcaattttgtaggcaaaatcaattctagttgaaagcaaccaa 35098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 340 - 405
Target Start/End: Complemental strand, 7953144 - 7953079
Alignment:
Q  340 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||||| || |||||||||||| || |||| ||| ||||||||||||||| |||||||||    
T  7953144 agtgaattgattatgaaaaattgattctggccaaaattgagttgaaggtaaagtgatttatgtttg 7953079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 46201 - 46285
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||| ||| ||| |  |||||| | || |||||| |||||||    
T  46201 aattgattttgagtgaattgattctgtaaaattgattctaactaaaagtgagttgcaattaaagttatttgtgtttggatacatt 46285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 765298 - 765382
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||||||| |||||| ||||| |||||||||||||||| |||||| | | ||||| ||||||||| || |||||  |||||||    
T  765298 aattgattttgagtgaaatgattgtgtaaaattgattctaactaaaagtaagttgaaagtaaagtgatttgtgtttccatacatt 765382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 431 - 479
Target Start/End: Complemental strand, 10874555 - 10874507
Alignment:
Q  431 tttgagtgttaaaatcaattatagaatcaaaagctctaatttctagctt 479  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  10874555 tttgaatgtaaaaatcaattctagaatcaaaagctctaatttctagctt 10874507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 404
Target Start/End: Original strand, 3436796 - 3436871
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 404  Q
    |||||||||||||||| |||||||| |||||||||||  | ||||||| ||||| | |||| ||||| ||||||||    
T  3436796 aattgatttttagtgagttgattttataaaattgatttcaactaaaaaagaatttacggtatagtgatttatgttt 3436871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 31305868 - 31305922
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    ||||||||||||  ||||||||| ||||||||||||||| ||||| |||||||||    
T  31305868 aaatttgagtgtataaatcaattctagaatcaaaagctccaatttttagcttcaa 31305922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 598 - 686
Target Start/End: Complemental strand, 6538672 - 6538584
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    |||||||||||||||||| || |||||||||||| || || || |||||| |  |||||  | ||||||| | ||||||||||||||||    
T  6538672 tagggcctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatg 6538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Complemental strand, 8147692 - 8147644
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  8147692 aaaacaattcaactttattttatcttttgctataaaaatagcttatgta 8147644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 759 - 863
Target Start/End: Original strand, 9559619 - 9559723
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 858  Q
    |||||||||||||| ||| ||||||||||| ||||| ||||| || ||  || |||||||||| |||||| | |||   ||||||||| |||||| | ||    
T  9559619 cgaaaacaatttaaatttattttatcttttgctatagaaataacttatacataagcgcttatcttgataaactcttgagctataaactgcaaataggttg 9559718  T
Q  859 tttat 863  Q
    |||||    
T  9559719 tttat 9559723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Complemental strand, 24626285 - 24626237
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    |||||||||||||||||||||||| ||| ||||| |||||||| |||||    
T  24626285 aaaacaatttaactttgttttatcctttcctatagaaatagcttatgta 24626237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 26280656 - 26280584
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||| | ||||||||| ||  || |||||||||||| | |||||||||||  |||||||||||||||    
T  26280656 aaaatcaattttggaatcaaaaactacaaattctagcttcaagtggaatcaattcttgaggcaaaatcaattc 26280584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 765 - 809
Target Start/End: Complemental strand, 31623546 - 31623502
Alignment:
Q  765 caatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||    
T  31623546 caatttaacgtcattttatctttttctataaaaatagctaatgta 31623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 598 - 686
Target Start/End: Original strand, 34404638 - 34404726
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    ||||| ||||||||||| ||| ||||||||||||| | ||||| ||||||||   || || ||||||||||| ||||||| | ||||||    
T  34404638 taggggctgtttggatttacttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatg 34404726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Original strand, 35070710 - 35070758
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    |||||||||| | ||| |||||||||||||||||||||||||| |||||    
T  35070710 aaaacaattttattttattttatctttttctataaaaatagcttatgta 35070758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 421 - 512
Target Start/End: Complemental strand, 852603 - 852512
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||| | ||||| |||| |||||||||| |||||||| || ||  ||||||||||||||| | ||||||||| |  ||||||||| ||||    
T  852603 aaacaatacatttgggtgtaaaaatcaattctagaatcagaacctacaatttctagcttcaagttgaatcaattatggaggcaaaataaatt 852512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 413
Target Start/End: Complemental strand, 882829 - 882774
Alignment:
Q  358 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||||||||| ||||| ||| ||||||||||| ||| ||||||||| |||||||    
T  882829 aattgattctagttaaaattgagttgaaggtaaaatgatttatgtttggatacatt 882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 3525099 - 3525004
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||| ||||| | |||||||||| ||||||||||||| | ||||||| ||| ||||| | ||| ||  |||| |||| |||||||||| |||||    
T  3525099 aaaattaattttgaatgaattgattatgtaaaattgattgtggctaaaagtgagttgaatgcaaactggtttatatttgaatacatttatgtaaaa 3525004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 419
Target Start/End: Complemental strand, 22692714 - 22692639
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatata 419  Q
    |||||||||||||||||||| ||| || |||| |||||| ||  |||||||| ||||| ||| || ||||||||||    
T  22692714 aattgattttgtaaaattgaatcttgcgaaaagtgaattaaatttaaagtgatttatgcttgcatgcatttatata 22692639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 441 - 570
Target Start/End: Original strand, 10400729 - 10400859
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagc-aaccaaacttgttat 539  Q
    |||||||||| |||||||||| |||  || | ||| ||||||||||||| |||||||  ||||||| |||||| | | |||||| |||||||| | | |     
T  10400729 aaaatcaattttagaatcaaaggctagaaatcctaacttcaactagaattaattctagtggcaaaaacaattctactcgaaagcaaaccaaacatatcaa 10400828  T
Q  540 actcaattctaccgctatagaatcaattttg 570  Q
    | |||||| |||  || ||||||||||||||    
T  10400829 aatcaattatacacctctagaatcaattttg 10400859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 20871673 - 20871627
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaa 375  Q
    |||||||||||| |||||||||| ||||||||||||| ||| |||||    
T  20871673 aattgatttttattgaattgattgtgtaaaattgattttagataaaa 20871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 600 - 634
Target Start/End: Original strand, 30536879 - 30536913
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatcta 634  Q
    ||||||||||||||||||| |||||||||||||||    
T  30536879 gggcctgtttggattgacttatttgagtttatcta 30536913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 442 - 510
Target Start/End: Original strand, 3436917 - 3436986
Alignment:
Q  442 aaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattct-aaaggcaaaatcaa 510  Q
    |||||||||||||||||||||| |  || || ||| ||||||||||||||||| | ||| ||||||||||    
T  3436917 aaatcaattatagaatcaaaagttacaaattatagattcaactagaatcaattttgaaaagcaaaatcaa 3436986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 4910972 - 4910887
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||  ||| |||||||||| ||||||||||||||  || |  ||||||||| ||||||||||| |  ||||| |||||||||    
T  4910972 aaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaatcaatttttgaggcagaatcaattc 4910887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 512
Target Start/End: Original strand, 6544543 - 6544604
Alignment:
Q  452 tagaatcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaatt 512  Q
    |||| ||||||||||  | |||||||||||| | |||||||||||| |||||||||||||||    
T  6544543 tagagtcaaaagctccgagttctagcttcaagttagaatcaattctgaaggcaaaatcaatt 6544604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 436 - 513
Target Start/End: Original strand, 6654119 - 6654196
Alignment:
Q  436 gtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||| |||||||| | |||||| |||||||  || | |||||||||| |||||| |||||| |||| |||||||||||    
T  6654119 gtgtgaaaatcaaatctagaattaaaagctacaaatcctagcttcaagtagaattaattctgaaggaaaaatcaattc 6654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 741
Target Start/End: Original strand, 31624959 - 31624996
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagctta 741  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  31624959 ttttcagcttattttcataagttctccaatatagctta 31624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 789
Target Start/End: Original strand, 31671153 - 31671182
Alignment:
Q  760 gaaaacaatttaactttgttttatcttttt 789  Q
    ||||||||||||||||||||||||||||||    
T  31671153 gaaaacaatttaactttgttttatcttttt 31671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 830
Target Start/End: Complemental strand, 33117532 - 33117463
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagc 830  Q
    |||||||||||||||  |||||| |||| |||||||| ||||| ||| || || |||||| |||||||||    
T  33117532 aaaacaatttaacttaattttatattttgctataaaagtagcttatgcataagtgcttattatgataagc 33117463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 428 - 465
Target Start/End: Original strand, 34027438 - 34027475
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagct 465  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  34027438 aaatttgagtgtaaaaatcaattctagaatcaaaagct 34027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 656
Target Start/End: Original strand, 35069525 - 35069582
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagact 656  Q
    |||||||||||| |||| || ||||||| ||||||| ||||| |||||||| ||||||    
T  35069525 agggcctgtttgtattggcttatttgagcttatctactgacataagttttgtaagact 35069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 9e-30; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 9e-30
Query Start/End: Original strand, 329 - 491
Target Start/End: Original strand, 35264324 - 35264495
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa----- 423  Q
    |||||||||| |||||||||||| ||||||||||||| || | |||| ||| ||||| ||||||||| |||||||||  |||||| || ||||||         
T  35264324 aattgattttgagtgaattgattctgtaaaattgattgtaaccaaaagtgagttgaaagtaaagtgagttatgtttgggtacattcatgtaaaaatgact 35264423  T
Q  424 ----caacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatca 491  Q
        ||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  35264424 tgaacaataaatttaagtgttaaaatcaattctagaatcaaaagctctaatttctagtttcaagtagaatca 35264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 430 - 513
Target Start/End: Complemental strand, 35058423 - 35058340
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||  |||||||||||||||    
T  35058423 atttgagtgttaaaatcaattctagaatcaaaagctcgaatttctagctccaagtagaatcaattcttgaggcaaaatcaattc 35058340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 601 - 861
Target Start/End: Original strand, 402457 - 402721
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    ||||||||||| |||||  ||||||||||||| | | ||| |||||||||||||||  ||||||||||  |||||||||||||||| || | |||   ||    
T  402457 ggcctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataag 402556  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataa 795  Q
    |  ||||||||||| ||||| |||| || |||  ||| ||||||| ||| |||      ||| |||||||||||||| |||   |||||||||||||||     
T  402557 ctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaacaatttaaattt-aattatctttttctatag 402655  T
Q  796 aaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgttt 861  Q
    |||||||| ||  || ||| ||||||||||||||||||| | |||| | || |||||||| |||||    
T  402656 aaatagcttatacataagcccttatcatgataagcacttgtgctatgagctgcaaataagttgttt 402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 512
Target Start/End: Original strand, 37334949 - 37335139
Alignment:
Q  331 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaa--------- 421  Q
    |||||||| |||||||||||| | ||||||||||||   |||||| ||| ||||||||||||||| |||||| || ||||||| |||||||             
T  37334949 ttgattttaagtgaattgattatataaaattgattccgactaaaattgagttgaaggtaaagtgatttatgtctgaatacattcatataaaaatgagttg 37335048  T
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||  ||||  ||||| |||||||||| ||||||||||||||   ||||||| |||| | || ||||||||||  ||||||||||||||    
T  37335049 aacaatgaattcaagtgtaaaaatcaattctagaatcaaaagctacgatttctaacttctagtaaaatcaattctcgaggcaaaatcaatt 37335139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 605 - 809
Target Start/End: Complemental strand, 20880627 - 20880419
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 704  Q
    ||||||||||| || ||||||| ||||||| |  || ||||||    |||||  ||||||||||  |||||||||||||||| ||||||||   ||| ||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  705 tttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaat 799  Q
    ||| ||||||||||||||||| ||||||| |||||| |||| |||  ||      ||| | ||||||||||||| |||||||||| ||| ||||||||||    
T  20880527 tttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaac-ttgttttatcatttgctataaaaat 20880429  T
Q  800 agctaatgta 809  Q
    |||| |||||    
T  20880428 agcttatgta 20880419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 422 - 513
Target Start/End: Complemental strand, 36302253 - 36302162
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||| |||||| |||| ||||||||||| || |||||||| ||| ||| ||||||||||| ||||||||| ||| ||||||||||||||||    
T  36302253 aacaataaatttaagtgctaaaatcaattctaaaatcaaaatctccaatctctagcttcaaatagaatcaactctgaaggcaaaatcaattc 36302162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 44958621 - 44958712
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||| ||| |||||||||||||||| || ||||||||||||||| |||||||||| || | ||||||||| |||  |||||||||||||||    
T  44958621 aacaataaagttgagtgttaaaatcatttctagaatcaaaagctccaatttctagcatcgagtagaatcaactctggaggcaaaatcaattc 44958712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 671 - 745
Target Start/End: Complemental strand, 30443978 - 30443904
Alignment:
Q  671 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    |||||||||||||||| |||||||| | ||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  30443978 atgaaaacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaa 30443904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 50427240 - 50427184
Alignment:
Q  333 gatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggta 389  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  50427240 gattttaagtgaattgaatttgtaaaattgattctagctaaaaatgagttgaaggta 50427184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 659 - 781
Target Start/End: Complemental strand, 21367764 - 21367637
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt----- 753  Q
    ||||||||||| |||||||||||||||| || | ||| | |||  |||||||||||||||||||||| ||||||  |||||||| || |||||||         
T  21367764 ttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttataca 21367665  T
Q  754 gtatgcgaaaacaatttaactttgtttt 781  Q
     ||| |||||||||||||||||| ||||    
T  21367664 ttatacgaaaacaatttaactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 598 - 753
Target Start/End: Complemental strand, 39980887 - 39980732
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    ||||| |||||||||||| ||  |||||| ||||||| |  || ||||||||  |||||  ||  ||||||| |||||||||||||||| |   ||||      
T  39980887 tagggtctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcat 39980788  T
Q  698 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
     ||| ||||||| ||||||||||||||| ||||||| ||||||||||| |||||||    
T  39980787 aagcttttttcaacttattttcataagttctccaatatagcttataaaaacaactt 39980732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 609 - 723
Target Start/End: Original strand, 31365111 - 31365225
Alignment:
Q  609 tggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttc 708  Q
    ||||||| || ||||||| |||||||||| || ||||||||  |||||  ||||||||||| |||||| ||||||||| ||||||||   ||| ||||||    
T  31365111 tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttc 31365210  T
Q  709 agcttattttcataa 723  Q
    | || ||||||||||    
T  31365211 aactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 30301013 - 30301105
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaag-ctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||| ||||||||||||||||| ||||| |||||| ||||  ||| ||||||||||||||| |||| |||||| |  |||||||||||||||    
T  30301013 aacaataaatttgagtgttaaaaccaattctagaattaaaaaactccaatttctagcttcaaatagagtcaattttggaggcaaaatcaattc 30301105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 435 - 507
Target Start/End: Original strand, 40147878 - 40147950
Alignment:
Q  435 agtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaat 507  Q
    |||||| ||||||||| ||||||||||||||| || ||||||||| || ||||||||||||| ||| ||||||    
T  40147878 agtgttgaaatcaattctagaatcaaaagctccaaattctagcttgaagtagaatcaattctgaagacaaaat 40147950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 335 - 422
Target Start/End: Original strand, 584712 - 584799
Alignment:
Q  335 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||| |||||||||||||||||||||||||| ||||||||| | | |||||| ||||  || || |||||| |||||||||| |||||    
T  584712 ttttgagtgaattgattttgtaaaattgattttagctaaaattaagttgaagctaaatggatttctgtttggatacatttatgtaaaa 584799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 759 - 829
Target Start/End: Original strand, 34638042 - 34638113
Alignment:
Q  759 cgaaaacaatttaactttg-ttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||| || ||| |||| |||||||||||||    
T  34638042 cgaaaacaatttaactttaattttatctttttctatagaaatagcttatatataagcggttatcatgataag 34638113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 665 - 803
Target Start/End: Original strand, 36631030 - 36631173
Alignment:
Q  665 gaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgc 759  Q
    ||||| |||||| ||||||||| | ||||||   ||| |||||| |||||||||||||||| ||||||| ||||| ||||| ||||||| ||     | |    
T  36631030 gaacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtac 36631129  T
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
     ||||||||||||||||  |||||| ||| ||||| ||||||||    
T  36631130 aaaaacaatttaactttactttatcctttactatagaaatagct 36631173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 671 - 829
Target Start/End: Complemental strand, 43062776 - 43062618
Alignment:
Q  671 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtat-gcgaaaacaatt 769  Q
    ||||||||||  |||| |||||||| | ||| ||||||||||| ||||||||||| ||||||| || ||| |||| ||| |||||||  |  ||||| ||    
T  43062776 atgaaaacagtatatggcaattttcacaagcttttttcagcttcttttcataagttctccaatata-cttgtaaaaacagcttgtatcacacaaacattt 43062678  T
Q  770 taactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
     |||  |||||||||||||||| ||||||| ||| ||| || ||| ||||||| ||||||    
T  43062677 aaacgatgttttatctttttctttaaaaatggcttatgcataagcacttatcacgataag 43062618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 411
Target Start/End: Original strand, 31766160 - 31766242
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 411  Q
    |||||||||| | |||||||||||||||||||| ||| | | ||||| ||| |||||| |||||||| ||||||||| |||||    
T  31766160 aattgattttgaatgaattgattttgtaaaattaattttggataaaagtgagttgaagttaaagtgatttatgtttggataca 31766242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 32112167 - 32112073
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||||||||| |||||||||||| ||||||||||||| | | ||||||||| ||||| | ||||| | ||||||||| ||  |||||| |||||    
T  32112167 aaattgattttgagtgaattgattatgtaaaattgattatggataaaaatgagttgaatgaaaagtaatttatgtttggatttatttatgtaaaa 32112073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 769 - 867
Target Start/End: Original strand, 34235164 - 34235262
Alignment:
Q  769 ttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||||| |||||| |||| ||||  ||||||||  |  || || |||||||||||||||||| | |||||||| ||||||||||| |||||||||||    
T  34235164 ttaactttattttatattttgctatggaaatagcttctacataagtgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaa 34235262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 597 - 750
Target Start/End: Complemental strand, 902082 - 901930
Alignment:
Q  597 ctagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttct 696  Q
    |||||| ||||||||||||  | ||||||| ||||||| || || |||||||||  | ||  |||||| |||| |||||||||||| ||  || ||| |     
T  902082 ctagggtctgtttggattgctttatttgagcttatctagtg-cagaagttttgcgtggctgtttgggaaaacttatgaaaacagctaataacattttcca 901984  T
Q  697 cgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 750  Q
      ||| ||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  901983 taagcttttttcaacttattttcataagttctccaatatagcttataaaaacaa 901930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 358 - 490
Target Start/End: Complemental strand, 3776665 - 3776524
Alignment:
Q  358 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa---------caacaaatttgagtgttaaaatcaa 448  Q
    |||||||||| ||||||| ||| ||||| ||||||||| ||||| ||| ||||||| || |||||          |||||||||||||||| ||||| ||    
T  3776665 aattgattctggctaaaattgagttgaatgtaaagtgatttatgcttggatacattgatgtaaaagtgagttcagcaacaaatttgagtgtaaaaattaa 3776566  T
Q  449 ttatagaatcaaaagctctaatttctagcttcaactagaatc 490  Q
    || |||||||| |||||  ||||||||| ||||| |||||||    
T  3776565 ttctagaatcagaagctacaatttctagattcaagtagaatc 3776524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 42644379 - 42644302
Alignment:
Q  329 aattgatttttagtgaattgattttgt-aaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||| |||||||||||||| | |||||||||| ||| ||||| ||| ||||| ||||||||| |||||||||    
T  42644379 aattgattttgagtgaattgattttataaaaattgattttagttaaaagtgagttgaatgtaaagtgatttatgtttg 42644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 421 - 482
Target Start/End: Complemental strand, 51285641 - 51285580
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| | |||| |||||||||    
T  51285641 aaacaacaaatttgagtgcaaaaatcaattctagaatcaaaagctgtgatttttagcttcaa 51285580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 7717367 - 7717427
Alignment:
Q  453 agaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||| |||||  ||||||||||||||| |||||||||||||  |||||||||||||||    
T  7717367 agaatcagaagctacaatttctagcttcaagtagaatcaattctggaggcaaaatcaattc 7717427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 759 - 867
Target Start/End: Complemental strand, 31403350 - 31403242
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 858  Q
    |||||||| ||||||||  |||||||||||  |||  |||||||| || ||| || |||||| |||||||||||||   ||| ||||| ||||||| |||    
T  31403350 cgaaaacattttaacttcattttatcttttgatatggaaatagcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctg 31403251  T
Q  859 tttatccaa 867  Q
    |||||||||    
T  31403250 tttatccaa 31403242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 438 - 513
Target Start/End: Original strand, 41115392 - 41115468
Alignment:
Q  438 gttaaaatcaattatagaatc-aaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||||||||| ||||| | |||||||  || |||||||||||| |||||||||||||| | |||||||||||||    
T  41115392 gttaaaatcaattgtagaagccaaaagctacaaattctagcttcaagtagaatcaattctacaagcaaaatcaattc 41115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 422 - 466
Target Start/End: Original strand, 46853549 - 46853593
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctc 466  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  46853549 aacaataaatttgagtgttaaaatcaattctagaatcaaaagctc 46853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 603 - 686
Target Start/End: Original strand, 9832672 - 9832755
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    ||||||| |||||||| ||||||| |||| |||||||| ||||||||  | |||  |||||||||||  |||||||||||||||    
T  9832672 cctgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatg 9832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 25359589 - 25359679
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||| |||| || |||| ||||||||||||||||| |||| ||  || ||||| |||||| |||||||||||||  ||||| ||||||||    
T  25359589 aacaataaatatgtgtgtgaaaatcaattatagaataaaaaactacaaattctaacttcaagtagaatcaattctggaggcagaatcaatt 25359679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 609 - 695
Target Start/End: Original strand, 31365232 - 31365318
Alignment:
Q  609 tggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    ||||||| || |||||||||||||||||| || || |||||  | |||  ||||||||||| ||||| |||||||||| ||||||||    
T  31365232 tggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttc 31365318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 52925551 - 52925617
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 410  Q
    ||||||||||||||||||||||||  |||||| ||| ||||| ||||||||  ||||||||| ||||    
T  52925551 aattgattttgtaaaattgattctcactaaaattgagttgaaagtaaagtggtttatgtttggatac 52925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 413
Target Start/End: Original strand, 1441331 - 1441404
Alignment:
Q  340 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||||| |||||||||||||||||||  |||||| ||| ||||| ||||||||| || |||||  |||||||    
T  1441331 agtgaattaattttgtaaaattgattctgtctaaaagtgagttgaacgtaaagtgatttgtgtttagatacatt 1441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 604 - 649
Target Start/End: Original strand, 25447163 - 25447208
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttg 25447208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 25577696 - 25577757
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||||| |||||||||| || ||||  ||||||||||||||||| | |||||||||    
T  25577696 aattgattttgtgaaattgattcaagataaacttgaattgaaggtaaagttatttatgtttg 25577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 867
Target Start/End: Original strand, 30956706 - 30956822
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgt----------atgagcgcttatcatgataagcacttctactataaactacaa 850  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||||          || |  |||||||||||||||| ||| | |||||| || |||    
T  30956706 aaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaa 30956805  T
Q  851 ataagctgtttatccaa 867  Q
    |||||||||||||||||    
T  30956806 ataagctgtttatccaa 30956822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 761 - 867
Target Start/End: Original strand, 30972518 - 30972634
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgt----------atgagcgcttatcatgataagcacttctactataaactacaa 850  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||||          || |  |||||||||||||||| ||| | |||||| || |||    
T  30972518 aaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaa 30972617  T
Q  851 ataagctgtttatccaa 867  Q
    |||||||||||||||||    
T  30972618 ataagctgtttatccaa 30972634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 605 - 680
Target Start/End: Complemental strand, 32582888 - 32582816
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacag 680  Q
    |||||||||||||| ||||||||||||||| |  || |||||||   |||||  ||||||||||||||||||||||    
T  32582888 tgtttggattgacttatttgagtttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 32582816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Original strand, 24684903 - 24684951
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||||| || ||| |||||||||||||||||||||||||| |||||    
T  24684903 aaaacaattaaaatttattttatctttttctataaaaatagcttatgta 24684951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 30958209 - 30958145
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagt 393  Q
    |||||||||| | |||||||||||||||||||||||| | ||||||  ||| ||||| |||||||    
T  30958209 aattgattttgaatgaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagt 30958145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 30974021 - 30973957
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagt 393  Q
    |||||||||| | |||||||||||||||||||||||| | ||||||  ||| ||||| |||||||    
T  30974021 aattgattttgaatgaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagt 30973957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 600 - 679
Target Start/End: Original strand, 42799880 - 42799960
Alignment:
Q  600 gggcctgtttggattgactcatttgag-tttatctattgacacaagttttgcaagactccttgggagaactcatgaaaaca 679  Q
    |||||||||||||||| || ||||||| |||||||| ||||| | ||||||  | |||| ||||||||||| |||||||||    
T  42799880 gggcctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca 42799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 867
Target Start/End: Original strand, 42800057 - 42800109
Alignment:
Q  815 gcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  42800057 gcttaacatgataagcgcttctgctataagctacaaataagctgttaatccaa 42800109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 42913228 - 42913164
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 391  Q
    |||||||||||| |||||||||||| | ||||||| |||||| |||||| |||||| || |||||    
T  42913228 aaaattgattttgagtgaattgattgtataaaattaattctaactaaaagtgaattaaatgtaaa 42913164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 49356304 - 49356336
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaa 359  Q
    |||||||||||||||||||||||||||||||||    
T  49356304 aaaattgatttttagtgaattgattttgtaaaa 49356336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 812 - 867
Target Start/End: Original strand, 1508722 - 1508777
Alignment:
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||||||||| | ||||||  | |||||||||||||| |||||    
T  1508722 agcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttccaa 1508777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 571
Target Start/End: Original strand, 3845148 - 3845276
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttata 540  Q
    |||||||||| ||||||||||||||| | ||||||| ||||| |   || ||||||| ||||| ||||||||| | | || | ||| ||||| ||| | |    
T  3845148 aaaatcaattctagaatcaaaagctccagtttctagtttcaagt--tataaattctagaggcagaatcaattctacttgagatcaaacaaacatgtcaaa 3845245  T
Q  541 ctcaattctaccgctatagaatcaattttgg 571  Q
     ||||||||||  || |||||||||||||||    
T  3845246 atcaattctacacctctagaatcaattttgg 3845276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 512
Target Start/End: Complemental strand, 5406957 - 5406886
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||| || ||||| |||||   |||||||||||| | ||||||| |||||| ||||||||||||||    
T  5406957 aaaatcaattctataatcagaagctaccatttctagcttcgagtagaatccattctagaggcaaaatcaatt 5406886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 598 - 649
Target Start/End: Original strand, 16072953 - 16073004
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    |||| |||||||||||||||| ||||||| ||||||| ||||| ||||||||    
T  16072953 taggacctgtttggattgacttatttgagcttatctaatgacataagttttg 16073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 403
Target Start/End: Complemental strand, 25620254 - 25620179
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtt 403  Q
    ||||| ||||| ||| |||||||||||||||||||||| ||  |||| || || |||| ||||||||| |||||||    
T  25620254 aaattaattttgagtaaattgattttgtaaaattgattataattaaatattaaatgaaagtaaagtgatttatgtt 25620179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 815 - 866
Target Start/End: Original strand, 31365416 - 31365467
Alignment:
Q  815 gcttatcatgataagcacttctactataaactacaaataagctgtttatcca 866  Q
    |||||||||||||| ||||| | |||||| || |||||||||||||||||||    
T  31365416 gcttatcatgataatcacttgtgctataagctgcaaataagctgtttatcca 31365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 755 - 829
Target Start/End: Original strand, 34632131 - 34632206
Alignment:
Q  755 tatgcgaaaacaatttaactttg-ttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    |||| ||||||||||| |||||  ||||||||||||||||| |||| ||| || ||| |||| |||||||||||||    
T  34632131 tatgtgaaaacaatttgactttaattttatctttttctatagaaattgcttatatataagcgattatcatgataag 34632206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 600 - 695
Target Start/End: Original strand, 42545312 - 42545407
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    ||||||| || ||||| || ||||||  | ||||| |||||  |||||||  |||||  ||||||||||||||||||||||||||||  |||||||    
T  42545312 gggcctgcttagattggcttatttgaactcatctagtgacattagttttgttagactatttgggagaactcatgaaaacagcttatgataattttc 42545407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 496
Target Start/End: Complemental strand, 52364102 - 52364047
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattct 496  Q
    ||||||||||||||||||||||||| ||| |  ||||||||| ||||| |||||||    
T  52364102 aaaatcaattatagaatcaaaagctataaatcatagcttcaagtagaaacaattct 52364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 422 - 472
Target Start/End: Complemental strand, 23187915 - 23187865
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaattt 472  Q
    |||||||||||||||||| ||| |||||| |||||| |||||||| |||||    
T  23187915 aacaacaaatttgagtgtaaaattcaattctagaattaaaagctccaattt 23187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 404
Target Start/End: Complemental strand, 24916639 - 24916581
Alignment:
Q  346 ttgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 404  Q
    |||||||||||||||||||||  ||||||| ||| ||||| ||||| ||| ||||||||    
T  24916639 ttgattttgtaaaattgattcaggctaaaagtgagttgaatgtaaaatgatttatgttt 24916581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 25129451 - 25129545
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||| || | ||||||||| |||||||||||||||  | ||||| ||| ||||| |||| |||| ||||||||| ||  |||||| |||||    
T  25129451 aaattgatcttgaatgaattgatgttgtaaaattgattcaggataaaagtgagttgaatgtaacgtgatttatgtttggatgtatttatgtaaaa 25129545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 429 - 499
Target Start/End: Original strand, 27499383 - 27499453
Alignment:
Q  429 aatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaa 499  Q
    ||||| ||| |||||||||||| |||||| |||||||  |||||||| ||||||| ||| |||||| ||||    
T  27499383 aatttaagtattaaaatcaattttagaattaaaagcttcaatttctaacttcaacaagagtcaattttaaa 27499453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 422
Target Start/End: Original strand, 41591269 - 41591359
Alignment:
Q  332 tgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||||| | ||||||||||   |||||| | |||| ||||||||||| |||||  |||||||| ||||||||| ||||||| || |||||    
T  41591269 tgattttaaatgaattgattcaataaaataggttcttgctaaaaatgagttgaatttaaagtgatttatgtttggatacattcatgtaaaa 41591359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 48089618 - 48089688
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacattt 414  Q
    |||||||| | ||||||||||||||| ||||| ||| ||||| ||||| ||| ||||| ||| ||||||||    
T  48089618 aattgattctttaaaattgattctagttaaaagtgagttgaatgtaaaatgatttatgattggatacattt 48089688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 674 - 743
Target Start/End: Original strand, 13715560 - 13715629
Alignment:
Q  674 aaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttata 743  Q
    ||||||||||||| ||| ||||   ||||||||||| |||||||||||||||  |||||| | |||||||    
T  13715560 aaaacagcttatgacaactttcataagcatttttcaacttattttcataagttgtccaatatcgcttata 13715629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 607 - 648
Target Start/End: Complemental strand, 26911740 - 26911699
Alignment:
Q  607 tttggattgactcatttgagtttatctattgacacaagtttt 648  Q
    |||||||||||| ||||||||||||||| ||||| |||||||    
T  26911740 tttggattgacttatttgagtttatctactgacataagtttt 26911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 608 - 649
Target Start/End: Original strand, 33405114 - 33405155
Alignment:
Q  608 ttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||    
T  33405114 ttggattgacttatttgagtttatctactgacataagttttg 33405155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 605 - 686
Target Start/End: Original strand, 34610725 - 34610806
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    |||||| || |||| ||||||| ||||||| ||||| |||||||| |  |||  ||||||||||| |||||||| |||||||    
T  34610725 tgtttgtatggacttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatg 34610806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 660 - 725
Target Start/End: Complemental strand, 37689325 - 37689261
Alignment:
Q  660 tgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagt 725  Q
    |||||||||| | |||||||||||||| ||||||||   ||| ||||||| |||||||||||||||    
T  37689325 tgggagaacttaagaaaacagcttatgacaattttc-aaagcttttttcaacttattttcataagt 37689261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 396
Target Start/End: Original strand, 44958553 - 44958622
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaa 396  Q
    ||||| || ||| |||||||||||  ||||||||||||| | ||||||| ||| ||||| ||||||||||    
T  44958553 aaaatcgactttgagtgaattgatcatgtaaaattgattttggctaaaagtgagttgaaagtaaagtgaa 44958622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 828
Target Start/End: Complemental strand, 46030980 - 46030911
Alignment:
Q  760 gaaaacaattt-aactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataa 828  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||| || ||| || | ||||||||||||    
T  46030980 gaaaacaattttaactttattttatctttttctatcgaaatagcttatatataagtgtttatcatgataa 46030911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 49158693 - 49158656
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgatt 365  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  49158693 aaattgattttgaatgaattgattttgtaaaattgatt 49158656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 440 - 512
Target Start/End: Complemental strand, 51167919 - 51167846
Alignment:
Q  440 taaaatcaattatagaa-tcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||||||| ||||| |||||||||  || || |||||| |||||||||||||| ||||  |||||||||||    
T  51167919 taaaatcaattgtagaagtcaaaagctgcaaattgtagcttaaactagaatcaattataaaaacaaaatcaatt 51167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 416
Target Start/End: Complemental strand, 53568050 - 53567961
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttat 416  Q
    |||||||||||| ||||||||||||||  |||||||||| |   ||||| ||| ||||| | ||||| | ||||||||| |||| |||||    
T  53568050 aaaattgattttgagtgaattgattttacaaaattgattttgattaaaagtgagttgaatgaaaagtaatttatgtttggatacctttat 53567961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 2e-27; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 602 - 753
Target Start/End: Complemental strand, 54426197 - 54426046
Alignment:
Q  602 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagc 701  Q
    |||||||||||||| || ||||||| ||||||| || || ||||||||  ||||| |||||||||||| | |||||||||||||| ||||||||   |||    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagc 54426098  T
Q  702 atttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
     |||||||  |||||||||||||| ||||||| ||| ||||||| |||||||    
T  54426097 ttttttcaagttattttcataagttctccaatatagattataaaaacaactt 54426046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 601 - 753
Target Start/End: Original strand, 17822780 - 17822932
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    |||||||||||||| ||| ||||||| ||||||| ||||| ||||| ||  |||||  || |||||||  |||||||||||||||| || |||||   ||    
T  17822780 ggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataag 17822879  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    | ||||| ||||||||||||||||| ||||||  |||||||| || |||||||    
T  17822880 ctttttttagcttattttcataagttctccaagatagcttatgaaaacaactt 17822932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 663 - 867
Target Start/End: Original strand, 50662715 - 50662918
Alignment:
Q  663 gagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaa 762  Q
    ||||||| |||||||||| | ||| ||||||||   ||| ||||||| |||||||||| || | ||||||| ||||||||| | ||||||| || ||  |    
T  50662715 gagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttata-gcata 50662813  T
Q  763 aacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgttta 862  Q
     |||||||||| || ||||||||| | |||||||||||||| ||  || | |||| |||||||||||| ||| |  ||||| || |||||||| ||||||    
T  50662814 tacaatttaacattattttatcttatgctataaaaatagcttatacataaacgctcatcatgataagctcttgtgatataagctgcaaataagttgttta 50662913  T
Q  863 tccaa 867  Q
    |||||    
T  50662914 tccaa 50662918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 600 - 753
Target Start/End: Original strand, 21731570 - 21731723
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    ||||||||||||||||  | |||||||  |||||| ||||| ||||||||  ||| |  ||||||||||| |||||||||||||||  ||||||||   |    
T  21731570 gggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataa 21731669  T
Q  700 gcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
     | ||||||| |||| |||||||| | ||||||| ||||||||||| |||||||    
T  21731670 acttttttcaacttactttcataaattctccaatatagcttataaaaacaactt 21731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 33844047 - 33843987
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  33844047 aacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaatttctagcttcaa 33843987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 428 - 531
Target Start/End: Original strand, 32818391 - 32818494
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 527  Q
    ||||||| |||  |||||||||| ||||||||||||||  || |||||||||||| |||||||||||||  ||||||||||||||| | | ||||| |||    
T  32818391 aaatttgtgtgcaaaaatcaattctagaatcaaaagctacaaattctagcttcaaatagaatcaattctggaggcaaaatcaattctactcgaaagaaac 32818490  T
Q  528 caaa 531  Q
    ||||    
T  32818491 caaa 32818494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 342 - 512
Target Start/End: Original strand, 55927696 - 55927875
Alignment:
Q  342 tgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatt 432  Q
    ||||||||||| ||||||||||||| || ||||| ||| ||| || ||| |||| ||||||||| ||||||| || |||||         |||| |||||    
T  55927696 tgaattgatttcgtaaaattgattccagttaaaattgagttggagttaatgtgatttatgtttggatacattcatgtaaaagtgacttgaacaataaatt 55927795  T
Q  433 tgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||| |  ||||||| |||||||| |||||  ||||| |||| |||| | ||||||||||| |||||||||||||||    
T  55927796 tgagtgtgacgatcaattctagaatcagaagctacaatttttagcctcaagtggaatcaattctgaaggcaaaatcaatt 55927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 601 - 745
Target Start/End: Original strand, 26780 - 26923
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    ||||||||||||||| || ||||||| ||||| | || || ||| ||||  |||||  ||  ||||| | |||||||||||||||| ||| |||| | ||    
T  26780 ggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaag 26879  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    | |||||||| |||||||||||||| ||||||| |||||||||||    
T  26880 c-tttttcagattattttcataagttctccaatatagcttataaa 26923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 600 - 732
Target Start/End: Original strand, 25904137 - 25904269
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    |||||||||| | |||||| ||||||| ||||| | ||||| || |||||  |||||  |||||||| || |||||||||||||||| || |||||   |    
T  25904137 gggcctgttttggttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataa 25904236  T
Q  700 gcatttttcagcttattttcataagtactccaa 732  Q
    || |||||||||||||||| |||||| ||||||    
T  25904237 gcttttttcagcttatttttataagttctccaa 25904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 613 - 745
Target Start/End: Complemental strand, 29657527 - 29657395
Alignment:
Q  613 ttgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagct 712  Q
    |||||| ||||||| |||||||   ||||||||||||  ||| | |||| ||||||| |||||||||||||||| ||||||||   ||||||||| ||||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgacaattttcaaaagcatttttgagct 29657428  T
Q  713 tattttcataagtactccaatctagcttataaa 745  Q
    || |||||||| | ||| ||| |||||| ||||    
T  29657427 taatttcataacttctctaatatagcttgtaaa 29657395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 601 - 753
Target Start/End: Original strand, 53294029 - 53294181
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    |||||||||||||||||| ||||| | ||||||| |||||  ||||||| ||||||  |||||| ||||||||||||||  |||||    |||||   ||    
T  53294029 ggcctgtttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaag 53294128  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    |  |||||||||| ||||||||||| ||| ||| ||| ||||||| |||||||    
T  53294129 ctattttcagcttgttttcataagttctctaatatagtttataaaaacaactt 53294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 428 - 571
Target Start/End: Complemental strand, 2635227 - 2635084
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 527  Q
    |||||||||| |||||||||||| |||| |||||||||| ||| |||||||||||  | ||||||||||  ||||||||||| ||| | |  |||||||     
T  2635227 aaatttgagtcttaaaatcaattctagactcaaaagctccaatctctagcttcaagcataatcaattctggaggcaaaatcagttctacttaaaagcaat 2635128  T
Q  528 caaacttgttatactcaattctaccgctatagaatcaattttgg 571  Q
    ||||| ||| | | |||||| |||   | |||||||||||||||    
T  2635127 caaacatgtcaaaatcaattttacacttctagaatcaattttgg 2635084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 43868310 - 43868215
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||||| | |||||||||||||||||||| ||||||| ||||| | | ||||| ||||||||| || | |||| |||||||||| |||||    
T  43868310 aaaattgattttgaatgaattgattttgtaaaattaattctagttaaaagtaagttgaaagtaaagtgatttgtctttggatacatttatgtaaaa 43868215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 761 - 867
Target Start/End: Complemental strand, 3155593 - 3155487
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||  ||    |||||||||||||||| ||| |||||||| || || ||||| ||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagcttatacatacatgcttatcatgataagcgcttgtactataagctgcagataagttgtt 3155494  T
Q  861 tatccaa 867  Q
    |||||||    
T  3155493 tatccaa 3155487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 329 - 513
Target Start/End: Complemental strand, 22250398 - 22250205
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa------ 422  Q
    |||||||||| || ||||||||| ||||||||||||| |  ||||||  || ||||| || |||||| |||  |||| ||||||| || |||||          
T  22250398 aattgattttgagggaattgattctgtaaaattgattatgactaaaagcgagttgaatgtgaagtgatttacatttggatacattcatgtaaaagtgaat 22250299  T
Q  423 ---acaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
       |||| |||||||||| |||||| |||||  |||||||||||||  ||||||| ||||||| ||||| |||| ||| | |||||||||||||    
T  22250298 cgaacaataaatttgagtattaaaagcaatttcagaatcaaaagcttcaatttcttgcttcaagtagaaccaatcctagatgcaaaatcaattc 22250205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 604 - 680
Target Start/End: Complemental strand, 8705093 - 8705017
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacag 680  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||  |||||  ||||||||||| || |||||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaacttataaaaacag 8705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 37439215 - 37439155
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    ||||| ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  37439215 aacaataaaattgagtgtaaaaatcaattatagaattaaaagctataatttctagcttcaa 37439155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 605 - 753
Target Start/End: Original strand, 39603090 - 39603237
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 704  Q
    ||||||||||| || ||||||| || |||||||  | ||||||||  |||||  ||||||||||| | |||||||||||||| |||||||    ||| ||    
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagcttt 39603188  T
Q  705 tttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||| |  |||||||||||||| ||||||| || |||||||| |||||||    
T  39603189 ttttaagttattttcataagttctccaatataccttataaaaacaactt 39603237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 428 - 551
Target Start/End: Complemental strand, 35065127 - 35065004
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 527  Q
    ||||||| |||| |||||||||| ||||||||||||    || | |||||||||| || |||||||| |  ||||||||||||||| | | |||||||||    
T  35065127 aaatttgtgtgtaaaaatcaattctagaatcaaaagtcacaaatactagcttcaagtaaaatcaattattgaggcaaaatcaattctactcgaaagcaac 35065028  T
Q  528 caaacttgttatactcaattctac 551  Q
    ||||  ||| ||| ||||||||||    
T  35065027 caaaaatgtcataatcaattctac 35065004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 772 - 867
Target Start/End: Original strand, 26982 - 27079
Alignment:
Q  772 actttgttttatctttttctataaaaatagctaatgtat--gagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||| ||||||||||||| |||||||| ||| ||||||  | |||||||||||||||||| ||| | |||||| || |||| ||| |||||||||||    
T  26982 actttattttatctttttccataaaaatggcttatgtatatgcgcgcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaa 27079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 428 - 513
Target Start/End: Original strand, 2206364 - 2206450
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||||  |||||||||  ||||||||||||||| ||||| ||||||||| |||||||||||| |  ||| |||||||||||    
T  2206364 aaatttgagtgcaaaaatcaatcctagaatcaaaagctccaatttttagcttcaagctagaatcaattttggaggaaaaatcaattc 2206450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 607 - 725
Target Start/End: Complemental strand, 22030352 - 22030234
Alignment:
Q  607 tttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttt 706  Q
    |||| ||||||| ||||||| || ||||||  || ||||||||  || ||  ||||||||||| |||||||||||||||| ||||||||   ||| |||     
T  22030352 tttgtattgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttc 22030253  T
Q  707 tcagcttattttcataagt 725  Q
    |||| ||||||||||||||    
T  22030252 tcaggttattttcataagt 22030234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 411
Target Start/End: Original strand, 38740287 - 38740369
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 411  Q
    |||||||||| | |||||||||||||||||||||||| | | ||||| ||| |||||| | |||||| ||||||||| |||||    
T  38740287 aattgattttgaatgaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 38740369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 761 - 867
Target Start/End: Original strand, 44863042 - 44863148
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    ||||||||||||  || | ||| |||||||||||||||||||| ||| || ||| |||||||||| |||  ||| | |||||| || |||||||| ||||    
T  44863042 aaaacaatttaatgttatcttacctttttctataaaaatagcttatgcataagcacttatcatgacaagtgcttgtgctataagctgcaaataagttgtt 44863141  T
Q  861 tatccaa 867  Q
    |||||||    
T  44863142 tatccaa 44863148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 642 - 803
Target Start/End: Original strand, 50681045 - 50681211
Alignment:
Q  642 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 741  Q
    ||||||||  |||||  ||| ||||||| |||||||||| | ||| ||||||||   ||| |||||||  |||||||||||| | ||||||| |||||||    
T  50681045 aagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagctta 50681144  T
Q  742 taaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    || | |||||||      ||| | ||||||||||||| || ||||||||| | ||||||||||||||    
T  50681145 tataaacaacttatagcatatacaaaaacaatttaacattattttatcttatcctataaaaatagct 50681211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 8330167 - 8330126
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  8330167 aaaatcaattatagaatcaaaagctccaatttctagcttcaa 8330126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 428 - 512
Target Start/End: Complemental strand, 30357576 - 30357492
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||| |||| ||||||||||||| |||||||||||  || |   |||||||| |||||||||||||||||  ||||||||||    
T  30357576 aaatttgtgtgtaaaaatcaattatataatcaaaagctacaaatcacagcttcaagtagaatcaattctaaagataaaatcaatt 30357492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 604 - 743
Target Start/End: Complemental strand, 2244203 - 2244064
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 703  Q
    ||||||||||||| | ||  ||||||||||| ||||| |||||||   | |||  ||||||||| |  | ||||||||||||| |||| |||   | | |    
T  2244203 ctgtttggattgatttatccgagtttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaactt 2244104  T
Q  704 ttttcagcttattttcataagtactccaatctagcttata 743  Q
    |||||| ||||||||||||||| ||||||| |||||||||    
T  2244103 ttttcaccttattttcataagttctccaatatagcttata 2244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 422 - 473
Target Start/End: Complemental strand, 4243457 - 4243406
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttc 473  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  4243457 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 4243406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 671 - 750
Target Start/End: Original strand, 7839346 - 7839425
Alignment:
Q  671 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 750  Q
    ||||||||| |||||| ||||||||   ||| ||||||| ||||||||| ||||| || |||||||||||||||| ||||    
T  7839346 atgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaa 7839425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 18597110 - 18597019
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||| || ||||| ||||||||||||||||||||||||||| |  || || |||||||||  |||||||||||||  ||| ||||||||||    
T  18597110 aacaataactttgaatgttaaaatcaattatagaatcaaaaggttcaaattatagcttcaagttagaatcaattctggaggtaaaatcaatt 18597019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 419 - 509
Target Start/End: Complemental strand, 33843756 - 33843661
Alignment:
Q  419 aaaaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttc-----tagcttcaactagaatcaattctaaaggcaaaatca 509  Q
    |||||||| ||||||||||||||||||||||| ||| || |||||||| ||||||      |||||||| ||||||||||| |  |||||||||||    
T  33843756 aaaaacaataaatttgagtgttaaaatcaattttaggataaaaagctccaatttcagaatcagcttcaagtagaatcaattttggaggcaaaatca 33843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 603 - 753
Target Start/End: Original strand, 40830947 - 40831096
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatga-aaacagcttatgtcaattttctcgagc 701  Q
    ||||||||||||| || ||||||| |||||||||| || ||||||||  |||||  | || |||| | |||| |||||||||| | ||| |||    |||    
T  40830947 cctgtttggattggctaatttgagcttatctattg-cataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagc 40831045  T
Q  702 atttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
     ||||||| ||||||| ||||||| ||||||||||||||||||| |||||||    
T  40831046 ttttttcaacttattt-cataagttctccaatctagcttataaaaacaactt 40831096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 867
Target Start/End: Complemental strand, 11389516 - 11389410
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    |||||| |||||||||  ||||||||||| |||| |||||  | ||  || ||| ||||||||||||||||||  |  |||||||| |||||||| ||||    
T  11389516 aaaacagtttaactttactttatctttttttatagaaataatttatacataagcacttatcatgataagcactcatgatataaactgcaaataagttgtt 11389417  T
Q  861 tatccaa 867  Q
    |||||||    
T  11389416 tatccaa 11389410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 20911810 - 20911896
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||||||||| |||||||||||| ||||||||||||| | || |||  ||| ||||||| ||| | | ||||||||| |||||||    
T  20911810 aaaattgattttgagtgaattgattatgtaaaattgattatggcaaaagttgagttgaaggcaaaataatttatgtttgaatacatt 20911896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 428 - 493
Target Start/End: Complemental strand, 1048781 - 1048716
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaat 493  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| ||||| ||| || ||||||||||    
T  1048781 aaatttgagtgtaagaatcaattatagaattaaaagctataaattctaactttaagtagaatcaat 1048716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 712 - 800
Target Start/End: Complemental strand, 9760484 - 9760391
Alignment:
Q  712 ttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaata 800  Q
    |||||||||||||| ||||||| ||||||||||| |||||||      |||   |||| ||||||||||| ||||||||||||| |||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatctttttcaataaaaata 9760391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 421 - 482
Target Start/End: Complemental strand, 10185265 - 10185204
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    |||||| |||||||||||| || ||||||| ||||||||||||||  |||||||| ||||||    
T  10185265 aaacaataaatttgagtgtaaagatcaattttagaatcaaaagcttcaatttctaccttcaa 10185204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 604 - 725
Target Start/End: Original strand, 13126494 - 13126615
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 703  Q
    |||||||||||| || |||| || ||| ||| | ||| ||||||||  |||||  |||| |||||| || ||||||||||||| || || ||   ||| |    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt 13126593  T
Q  704 ttttcagcttattttcataagt 725  Q
    ||||||||||||||||||||||    
T  13126594 ttttcagcttattttcataagt 13126615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 606 - 695
Target Start/End: Original strand, 15173223 - 15173312
Alignment:
Q  606 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    ||||||||||||| ||||||  ||||||| ||||| ||||||||  |||||  ||||||||  | ||||||| |||||||| ||||||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttc 15173312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 867
Target Start/End: Complemental strand, 44138616 - 44138443
Alignment:
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaacacaacttg-----tatgcgaaaacaatttaactttgttttatctttttctat 793  Q
    |||| |||||||||||||||||||||| ||||||  | | |||| || |||| ||      ||| ||||| |||||||||||| ||||||||| | ||||    
T  44138616 agcaattttcagcttattttcataagttctccaacatggtttatgaaaacaaattacaggctatacgaaagcaatttaactttattttatcttctgctat 44138517  T
Q  794 aaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    | ||| |||| ||  || |||   ||||||||||||  ||| ||||| || || ||||||||||||||||||||    
T  44138516 agaaacagcttatacataagcaagtatcatgataagtgcttgtactaaaagctgcaaataagctgtttatccaa 44138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 24364103 - 24364167
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 391  Q
    |||||||||||| | |||||||||| |||||||||||||||  |||||| ||| ||||| |||||    
T  24364103 aaaattgattttgaatgaattgattatgtaaaattgattctcactaaaagtgatttgaatgtaaa 24364167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 598 - 646
Target Start/End: Complemental strand, 25571417 - 25571369
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagtt 646  Q
    |||||||||||||||||| || ||||||||||||||| ||||| |||||    
T  25571417 tagggcctgtttggattggcttatttgagtttatctactgacataagtt 25571369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 599 - 695
Target Start/End: Original strand, 42403936 - 42404031
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    |||||||||||||||||||| ||||||| ||||| | ||||| ||||||||   | ||  ||||||||| |  ||||||||||||||| ||||||||    
T  42403936 agggcctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttatgacaattttc 42404031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 422 - 572
Target Start/End: Complemental strand, 45329918 - 45329766
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttc-aactagaatcaattctaaaggcaaaatcaattc-aagtgg 519  Q
    ||||| |||||||||||| || ||||||| |||||||||||| |  ||||| ||| ||| ||  |||||||||| |  ||||||||| ||||| || | |    
T  45329918 aacaaaaaatttgagtgtaaatatcaattttagaatcaaaagattcaatttatagattcaaagaagaatcaattatggaggcaaaataaattctaattag 45329819  T
Q  520 aaagcaaccaaacttgttatactcaattctaccgctatagaatcaattttggc 572  Q
    | ||||||||||| ||||| | |||||| |||  || || |||||||||||||    
T  45329818 agagcaaccaaacatgttaaagtcaattttacacctctataatcaattttggc 45329766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 48575558 - 48575494
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 391  Q
    |||||| ||||| | |||||||||||||||||||||||| | | ||||||||| ||||| |||||    
T  48575558 aaaattaattttgaatgaattgattttgtaaaattgatttttgataaaaatgagttgaatgtaaa 48575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 5835853 - 5835778
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgt 402  Q
    |||||||||||| | ||||||||||||||| |||||||| |   ||||| ||||||||| | ||||||| ||||||    
T  5835853 aaaattgattttgattgaattgattttgtagaattgattttgattaaaactgaattgaatgaaaagtgatttatgt 5835778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 512
Target Start/End: Complemental strand, 16644029 - 16643958
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||| ||||||||||| || ||| || ||||||||| |||||| |||  |||| ||||||||||||    
T  16644029 aaaatcaattctagaatcaaaatctataaattatagcttcaagtagaataaatcataaacgcaaaatcaatt 16643958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 415
Target Start/End: Original strand, 17898057 - 17898127
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacattta 415  Q
    ||||||||||||| |||||||||| ||| ||| ||| ||||| ||||||||| ||||||||| ||| |||||    
T  17898057 aattgattttgtataattgattct-gctgaaagtgagttgaatgtaaagtgatttatgtttggatatattta 17898127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 432 - 479
Target Start/End: Complemental strand, 20712710 - 20712664
Alignment:
Q  432 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagctt 479  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  20712710 ttgagtgtaaaaatcaattatagaat-aaaagctccaatttctagctt 20712664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 759 - 806
Target Start/End: Complemental strand, 25885851 - 25885804
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaat 806  Q
    |||||||||||||||||| ||||||||||| ||||| ||| |||||||    
T  25885851 cgaaaacaatttaactttattttatcttttgctatagaaagagctaat 25885804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 603 - 694
Target Start/End: Complemental strand, 29774393 - 29774302
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaatttt 694  Q
    |||||||||| ||||| |||||||||||| || ||||   |||||||  |||||  || |||||||| ||||||| ||||||||||| ||||    
T  29774393 cctgtttggaatgacttatttgagtttatttactgactagagttttgtgagactgtttaggagaacttatgaaaatagcttatgtcattttt 29774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 512
Target Start/End: Complemental strand, 51093309 - 51093238
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||| ||||  ||||||||| || |||||||||||  ||||||||||| || ||||||||| ||||    
T  51093309 aaaatcaattgtagaggcaaaagctccaaattctagcttcagttagaatcaattatagaggcaaaataaatt 51093238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 675 - 742
Target Start/End: Complemental strand, 55302330 - 55302263
Alignment:
Q  675 aaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttat 742  Q
    |||||||||||| ||||||||   ||| |||||||||||||||||||||||  |||||  ||||||||    
T  55302330 aaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 1023849 - 1023907
Alignment:
Q  347 tgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    ||||| ||||||| ||||| ||||||||| ||| ||||||||||||||| || ||||||    
T  1023849 tgattctgtaaaaatgattttagctaaaagtgagttgaaggtaaagtgatttttgtttg 1023907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 428 - 478
Target Start/End: Complemental strand, 2206900 - 2206850
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagct 478  Q
    |||||||||||||||| |||||| || |||||||||||| ||||| |||||    
T  2206900 aaatttgagtgttaaagtcaattctaaaatcaaaagctccaatttttagct 2206850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 432 - 494
Target Start/End: Complemental strand, 9064291 - 9064229
Alignment:
Q  432 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    |||||||| |||||||||| ||||||||||| ||  || |||||| ||||| |||||||||||    
T  9064291 ttgagtgtgaaaatcaattctagaatcaaaaactacaaattctagtttcaagtagaatcaatt 9064229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 600 - 634
Target Start/End: Original strand, 22662165 - 22662199
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatcta 634  Q
    ||||||||||||||||||| |||||||||||||||    
T  22662165 gggcctgtttggattgacttatttgagtttatcta 22662199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 600 - 634
Target Start/End: Original strand, 22666644 - 22666678
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatcta 634  Q
    ||||||||||||||||||| |||||||||||||||    
T  22666644 gggcctgtttggattgacttatttgagtttatcta 22666678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 599 - 649
Target Start/End: Original strand, 27043743 - 27043793
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    |||| ||||||||||||||| ||||||| ||||||| ||||| ||||||||    
T  27043743 agggtctgtttggattgacttatttgagcttatctactgacataagttttg 27043793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 471 - 513
Target Start/End: Original strand, 29779118 - 29779160
Alignment:
Q  471 ttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  29779118 ttctagcttcaagtagaatcaattctacaagcaaaatcaattc 29779160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 409
Target Start/End: Original strand, 35122301 - 35122375
Alignment:
Q  335 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 409  Q
    ||||||||||| | |||  ||||||||| |||||||||||| ||| ||||||||| ||| | |||||||| ||||    
T  35122301 tttttagtgaactaattaagtaaaattggttctagctaaaattgagttgaaggtatagttatttatgtttatata 35122375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 761 - 803
Target Start/End: Complemental strand, 43505946 - 43505904
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    ||||||||||||| || ||||||||||| ||||||||||||||    
T  43505946 aaaacaatttaacgttattttatcttttgctataaaaatagct 43505904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 765 - 803
Target Start/End: Complemental strand, 44797872 - 44797834
Alignment:
Q  765 caatttaactttgttttatctttttctataaaaatagct 803  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  44797872 caatttaacgttgttttatcttttgctataaaaatagct 44797834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 761 - 803
Target Start/End: Complemental strand, 51630101 - 51630059
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||    
T  51630101 aaaacaatttaactttattttatcttttgctatataaatagct 51630059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 431 - 513
Target Start/End: Original strand, 55639744 - 55639826
Alignment:
Q  431 tttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||||||| ||||| |||||| |||| ||  |||||||| | | || || |||||||| ||||| ||||||||||||    
T  55639744 tttgagtgttaaaaccaattctagaataaaaatcttcaatttctaaccttaagtaaaatcaattataaagacaaaatcaattc 55639826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 494
Target Start/End: Complemental strand, 2206580 - 2206515
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaatt 494  Q
    |||||||||| |||| ||||||||||||||||||||  ||| | |||||||||  |||||||||||    
T  2206580 atttgagtgtaaaaaacaattatagaatcaaaagctacaatgtttagcttcaagttagaatcaatt 2206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 2206683 - 2206622
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    ||||||||||||||||||||||||  | |||| ||| |||||||| |||||| |||| ||||    
T  2206683 aattgattttgtaaaattgattctgacgaaaattgagttgaaggtgaagtgatttatttttg 2206622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 631
Target Start/End: Complemental strand, 20109172 - 20109139
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttat 631  Q
    ||||||||||||||| ||||||||||||||||||    
T  20109172 tagggcctgtttggaatgactcatttgagtttat 20109139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 599 - 724
Target Start/End: Complemental strand, 24169420 - 24169295
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||| ||||||||||| || ||| ||||||||||| || || ||||||||  |||||  ||| |||||||  | |||| |||||||| || |||||       
T  24169420 agggcttgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcata 24169321  T
Q  699 agcatttttcagcttattttcataag 724  Q
    ||  ||||||| ||||||||||||||    
T  24169320 agattttttcaacttattttcataag 24169295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 25405766 - 25405729
Alignment:
Q  325 ttaaaattgatttttagtgaattgattttgtaaaattg 362  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  25405766 ttaaaattgattttgagtgaattgattatgtaaaattg 25405729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 750
Target Start/End: Complemental strand, 43506093 - 43505940
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    |||||| | |||| || |||| ||||||||||||| |  |||| ||||||||  |||||  | ||||| |||| |||||| ||||||||  | |||||      
T  43506093 tagggcatatttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatagcttatgagagttttcat 43505994  T
Q  698 gagc-atttttcagcttattttcataagtactccaatctagcttataaacacaa 750  Q
     |||  ||||||| |||||||||||| |  ||||||||||||||||||| ||||    
T  43505993 aagctttttttcaacttattttcatatgatctccaatctagcttataaaaacaa 43505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 452 - 573
Target Start/End: Original strand, 48045746 - 48045867
Alignment:
Q  452 tagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttatactcaattctac 551  Q
    |||||| |||| ||| ||||||||||||||| | |||| ||||||   |||||||| | ||  | | |||||||||||||| |||   | ||||||||||    
T  48045746 tagaataaaaaactccaatttctagcttcaagtcgaataaattctggtggcaaaattagttttacttgaaagcaaccaaacatgtccgaatcaattctac 48045845  T
Q  552 cgctatagaatcaattttggcc 573  Q
      || |||||||||||||||||    
T  48045846 ttctctagaatcaattttggcc 48045867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 50945390 - 50945463
Alignment:
Q  331 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 404  Q
    |||||||| |||||||||||||| ||||||||||||  | ||||  ||| || || ||||||||| ||||||||    
T  50945390 ttgattttgagtgaattgattttataaaattgattccggataaatttgagttaaatgtaaagtgatttatgttt 50945463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 732
Target Start/End: Complemental strand, 55064932 - 55064859
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaa 732  Q
    |||||||||||  |||||||| |||||| || |||||   ||| ||||||| ||||||||||||||| ||||||    
T  55064932 ttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaa 55064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 5e-25; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 329 - 551
Target Start/End: Complemental strand, 32928064 - 32927833
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa------ 422  Q
    |||||||||| || ||||||||| |||||||||||||||  |||||| ||| ||||||| ||||||| || |||||| ||||||| || |||||          
T  32928064 aattgattttgagggaattgattatgtaaaattgattcttactaaaattgagttgaaggcaaagtgatttgtgtttggatacattcatgtaaaagtgagt 32927965  T
Q  423 ---acaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtgg 519  Q
       || | ||||||| |||| ||||| |||| || |||||||||||  || | |||||||||| ||||||||| | |  ||||||||||||||| | |||    
T  32927964 tgaactataaatttgtgtgtaaaaatgaattctataatcaaaagctacaaatcctagcttcaagtagaatcaactattgaggcaaaatcaattctactgg 32927865  T
Q  520 aaagcaaccaaacttgttatactcaattctac 551  Q
    ||||||||||||| ||| | | ||||||||||    
T  32927864 aaagcaaccaaacatgtcagagtcaattctac 32927833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 600 - 809
Target Start/End: Original strand, 35534527 - 35534738
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    |||||||||| || ||||| ||||||| ||||||| | ||| ||||||||  |||||  ||| |||||||  ||||||||||||||| |||||||  | |    
T  35534527 gggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaa 35534626  T
Q  700 gcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgt---atgcgaaaacaatttaactttgttttatctttttctataaa 796  Q
    || |||||| ||||| |||||||||| ||||||| || ||||| || ||||| | |   || | |||||||||||||||| ||||||| |||||||||||    
T  35534627 gcttttttcggcttactttcataagttctccaatataacttatgaaaacaacatataacatacaaaaacaatttaactttattttatc-ttttctataaa 35534725  T
Q  797 aatagctaatgta 809  Q
    |||| || |||||    
T  35534726 aatatcttatgta 35534738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 599 - 742
Target Start/End: Original strand, 30251367 - 30251510
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| |||||| |  |||||  ||||||||||| | |||||||||||||  || |||||       
T  30251367 agggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcata 30251466  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttat 742  Q
    ||| |||| ||||||||||||||||||  |||||  ||||||||    
T  30251467 agctttttacagcttattttcataagtggtccaagatagcttat 30251510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 342 - 538
Target Start/End: Original strand, 26100072 - 26100278
Alignment:
Q  342 tgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatt 432  Q
    |||||||||| |||||||||||||||  ||||||| || ||||||||||||  | || |||||| || ||||||| |||||         || | |||||    
T  26100072 tgaattgattatgtaaaattgattctgactaaaaacgagttgaaggtaaagctatttgtgtttggatgcatttatgtaaaagtgagttgaaccataaatt 26100171  T
Q  433 tgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaag-gcaaaatcaattcaagtggaaagcaaccaaa 531  Q
    || |||| |||||||||||||||||||||||||  || | |||||||||| ||||| |||||||| ||  |||| ||||||| | | | |||||||||||    
T  26100172 tgtgtgtaaaaatcaattatagaatcaaaagctacaaatcctagcttcaaatagaaccaattctagagaccaaagtcaattctacttggaagcaaccaaa 26100271  T
Q  532 cttgtta 538  Q
    | |||||    
T  26100272 catgtta 26100278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 7602042 - 7602105
Alignment:
Q  330 attgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagt 393  Q
    ||||||||| |||||||||||||| |||||||||||| | |||||||||||||||| |||||||    
T  7602042 attgattttgagtgaattgattttataaaattgattcgaactaaaaatgaattgaatgtaaagt 7602105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 642 - 745
Target Start/End: Complemental strand, 26771379 - 26771276
Alignment:
Q  642 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 741  Q
    ||||||||  |||||  ||||||||||| |||||||||||||||| ||||||||   ||| ||||||| ||||||||||||||| ||| ||| || ||||    
T  26771379 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcataagttctctaatatatctta 26771280  T
Q  742 taaa 745  Q
    ||||    
T  26771279 taaa 26771276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 598 - 680
Target Start/End: Original strand, 43717846 - 43717928
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacag 680  Q
    |||||||| ||||||||| || ||||||| ||||||||||||| ||||||||  |||||  ||||||||||| ||||||||||    
T  43717846 tagggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 712 - 864
Target Start/End: Original strand, 30657798 - 30657944
Alignment:
Q  712 ttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatg 811  Q
    |||||||||||||| ||||||| ||||||||||| ||| ||| ||     | ||||||||| ||| |   |||||||||||||||||||| | ||||||     
T  30657798 ttattttcataagttctccaatatagcttataaaaacatcttataac---atacaatttaaatttat---atctttttctataaaaatagtttatgtata 30657891  T
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatc 864  Q
    ||||||||||||||| |    || | |||||||||||||||||| ||||||||    
T  30657892 agcgcttatcatgattaatgtttgtgctataaactacaaataagttgtttatc 30657944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 426 - 512
Target Start/End: Complemental strand, 4554401 - 4554314
Alignment:
Q  426 acaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||||| | |||||||||| ||| ||||||||||| ||||||| |||||||  |||||||||||||  || |||||||||||    
T  4554401 acaaatttgagtataaaaatcaattttagtatcaaaagctcaaatttcttgcttcaagatagaatcaattcttgagacaaaatcaatt 4554314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 642 - 745
Target Start/End: Complemental strand, 18133770 - 18133667
Alignment:
Q  642 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 741  Q
    ||||||||  |||||  |||||||| ||  ||||| ||||||||  |||||||| | ||| ||||||||||||||||||||||| ||||||| ||| |||    
T  18133770 aagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttattttcataagttctccaatatagttta 18133671  T
Q  742 taaa 745  Q
    ||||    
T  18133670 taaa 18133667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 329 - 423
Target Start/End: Complemental strand, 10368137 - 10368043
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    |||||||||| ||||||||| |||||||||||||||| |   ||||| ||| ||||||||||||||| || |||||  ||||||| || ||||||    
T  10368137 aattgattttgagtgaattgtttttgtaaaattgattttgagtaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaaa 10368043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 428 - 526
Target Start/End: Original strand, 13418840 - 13418938
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaa 526  Q
    |||||||| |||||||||||||||| |||||||||||||  ||||||  ||| || ||||||||||| | ||| |||||| ||||| | | ||||||||    
T  13418840 aaatttgaatgttaaaatcaattatggaatcaaaagctccgatttcttactttaagtagaatcaattttgaagacaaaattaattctacttgaaagcaa 13418938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 598 - 803
Target Start/End: Original strand, 35643900 - 35644103
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    ||||||||||| |||||| || ||||| | ||||||| || || || |||||  |||||  |||||| |||| ||||||| || ||||| ||||||||      
T  35643900 tagggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 35643999  T
Q  698 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaa 797  Q
     ||| ||||||| ||||||||||||||  ||||||| ||| || || | |||||   ||| |||||||||||||||  |  |||||||||| | | ||||    
T  35644000 aagcttttttcaacttattttcataagctctccaatatagtttgtataaacaac--ctatacgaaaacaatttaacggtaatttatcttttgccagaaaa 35644097  T
Q  798 atagct 803  Q
    ||||||    
T  35644098 atagct 35644103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 326 - 423
Target Start/End: Complemental strand, 3206231 - 3206135
Alignment:
Q  326 taaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    ||||||||||||| ||  |||| ||||||||||||||||| ||  ||||||| | || ||| |||| |||||| |||||| |||||||||||||||||    
T  3206231 taaaattgattttaagctaatttattttgtaaaattgattttacgtaaaaat-agtttaagataaaatgaattttgtttgaatacatttatataaaaa 3206135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 341 - 422
Target Start/End: Complemental strand, 28805335 - 28805254
Alignment:
Q  341 gtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||| ||||||||||||| |||||| |  ||||||||| ||||| ||||| ||| ||||||||| ||||||| ||||||||    
T  28805335 gtgaagtgattttgtaaaactgattccaaataaaaatgatttgaaagtaaaatgatttatgtttgaatacattaatataaaa 28805254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 1820512 - 1820460
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatga 379  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||||    
T  1820512 aaaattgattttgagtgaattggttttgttaaattgattctggctaaaaatga 1820460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 1854957 - 1854905
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatga 379  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||||    
T  1854957 aaaattgattttgagtgaattggttttgttaaattgattctggctaaaaatga 1854905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 598 - 686
Target Start/End: Original strand, 32840898 - 32840986
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    ||||| || |||| ||||||| | ||||| ||||||| | ||||||||||||| |||||  ||||||||||| ||||||||| ||||||    
T  32840898 tagggtctatttgaattgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatg 32840986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 422
Target Start/End: Original strand, 9461450 - 9461544
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||||| ||| |||||||| | |||||||||||||  || ||||||||||| |  |||||||| || |||||| ||||||| ||||||||    
T  9461450 aaaattgattttgagttaattgattatttaaaattgattctgact-aaaatgaattgcaactaaagtgatttgtgtttggatacattcatataaaa 9461544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 599 - 801
Target Start/End: Original strand, 10758170 - 10758376
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||| |||||| ||||||| ||||||  ||||||  | ||| ||||||||  |||||  |||  |||| | |||||||||||||||| ||||||||       
T  10758170 agggcatgtttgaattgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaa 10758269  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctat 793  Q
    ||| ||||||||||| |||||||||||   | ||| ||||||||||| |||||||      ||| | |||||||||||||||| ||||||  ||| ||||    
T  10758270 agcttttttcagcttgttttcataagt-tgctaatatagcttataaagacaacttatagcatatacaaaaacaatttaactttattttatgatttgctat 10758368  T
Q  794 aaaaatag 801  Q
    | ||||||    
T  10758369 agaaatag 10758376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 622 - 801
Target Start/End: Original strand, 35749506 - 35749684
Alignment:
Q  622 ttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcat 721  Q
    ||||| ||||||||||||| ||||||||| || ||  ||| ||||||| ||||||||||||| |  || |||||   | | ||||||| | |||||||||    
T  35749506 ttgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatattttcat 35749605  T
Q  722 aagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatag 801  Q
    |||| ||  ||  ||||||||  | ||||||| |||   ||||||| ||||||| |||||||||||| ||||| ||||||    
T  35749606 aagttctttaagatagcttatggaaacaacttatataaaaaaacaa-ttaacttagttttatcttttgctatagaaatag 35749684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 4336571 - 4336625
Alignment:
Q  331 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaa 385  Q
    |||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||    
T  4336571 ttgattttgagtgaattgattttgtaaaattgattgtggctaaaagtgaactgaa 4336625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 346 - 416
Target Start/End: Complemental strand, 4950638 - 4950568
Alignment:
Q  346 ttgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttat 416  Q
    |||||||| ||||||||||| | |||| || ||| ||||||||||||||| ||||||||| ||| ||||||    
T  4950638 ttgattttttaaaattgattattgctataattgagttgaaggtaaagtgatttatgtttggatatatttat 4950568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 428 - 494
Target Start/End: Original strand, 13384675 - 13384741
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    ||||||| |||| |||||||||| ||||||||||||||  || || ||||||||| |||||||||||    
T  13384675 aaatttgtgtgtgaaaatcaattctagaatcaaaagctacaaattttagcttcaaatagaatcaatt 13384741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 18355760 - 18355798
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgatt 365  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  18355760 aaaattgattttgagtgaattgattttgtaaaattgatt 18355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 600 - 685
Target Start/End: Complemental strand, 38602483 - 38602400
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttat 685  Q
    ||||||||||||||||||| ||||||| ||||||| ||||| ||||||||  || ||  ||||||||||| ||  |||||||||||    
T  38602483 gggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaacttat--aaacagcttat 38602400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 422
Target Start/End: Complemental strand, 18123398 - 18123305
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||  |||||||||||  |||||||| || |||| |||||| ||||||||||||||| ||| || |||| | ||| |||||| |||||    
T  18123398 aattgatttagagtgaattgatgatgtaaaatcgactctaactaaaagtgaattgaaggtaaaatgatttgtgttggaatatatttatgtaaaa 18123305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 659 - 752
Target Start/End: Complemental strand, 37945693 - 37945600
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaact 752  Q
    |||||||||||  ||||||||||||||| |||||| |   ||||||||| | |||||||||| ||||  | |||| ||||||||||| ||||||    
T  37945693 ttgggagaacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaact 37945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 343 - 411
Target Start/End: Complemental strand, 1373149 - 1373081
Alignment:
Q  343 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 411  Q
    ||||||||||||||||||||||| | | ||||| ||| |||||| | |||||| ||||||||| |||||    
T  1373149 gaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 1373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 432 - 468
Target Start/End: Original strand, 3478728 - 3478764
Alignment:
Q  432 ttgagtgttaaaatcaattatagaatcaaaagctcta 468  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3478728 ttgagtgttaaaatcaattttagaatcaaaagctcta 3478764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 441 - 497
Target Start/End: Original strand, 15677850 - 15677906
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 497  Q
    |||||||||| || ||||||||||| ||| | |||||||||| ||||||||||||||    
T  15677850 aaaatcaattctataatcaaaagctataaatcctagcttcaagtagaatcaattcta 15677906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 30706323 - 30706283
Alignment:
Q  345 attgattttgtaaaattgattctagctaaaaatgaattgaa 385  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  30706323 attgattttgtaaaattgattctaactgaaaatgaattgaa 30706283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 38516416 - 38516328
Alignment:
Q  335 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    |||| ||||||||||||||||| |||||||| | | ||| | ||| ||||| ||||||||| ||||||||| ||  |||||| ||||||    
T  38516416 ttttgagtgaattgattttgtagaattgattttcgataatagtgagttgaatgtaaagtgatttatgtttggatgtatttatgtaaaaa 38516328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 428 - 512
Target Start/End: Complemental strand, 38868562 - 38868478
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||| |||| |||||||||||||||| ||||||||  || |  ||||||||| ||||||||||| || |||||  |||||||    
T  38868562 aaatttgtgtgtgaaaatcaattatagaaccaaaagctacaaatcttagcttcaagtagaatcaattttagaggcatcatcaatt 38868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 16972079 - 16972170
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||| ||||||| || | |||||||||| || ||| |||| ||  || |||||||||||| || |||||| ||| ||||||||||||||||    
T  16972079 aacaataaatttgtgtttaaaaatcaattctaaaattaaaaactacaaattctagcttcaaatacaatcaactctgaaggcaaaatcaattc 16972170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 422 - 512
Target Start/End: Complemental strand, 38203356 - 38203265
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||||| | | ||||||| |||| |||||||| || ||||||||| || ||||||  |||||| || |||| ||||||||||||||    
T  38203356 aacaacaaatttaaatattaaaattaattctagaatcataacctctaatttttaacttcaagttagaataaactctagaggcaaaatcaatt 38203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 601 - 752
Target Start/End: Complemental strand, 38648506 - 38648355
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    |||||||| |||||| || |||| || ||||||| ||||| ||||||||  |||||  |||||||| || |||||||||||| ||| || || ||   ||    
T  38648506 ggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataag 38648407  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaacacaact 752  Q
    | ||||| ||| || |||||||||| || |||  |||||||| || ||||||    
T  38648406 cttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaact 38648355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 597 - 744
Target Start/End: Original strand, 43045636 - 43045783
Alignment:
Q  597 ctagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttct 696  Q
    |||| |||||||||||||| || |||| || ||||||| |  || ||| ||||  |||||  || ||||| || ||||||||||||||   |||||||      
T  43045636 ctagagcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaa 43045735  T
Q  697 cgagcatttttcagcttattttcataagtactccaatctagcttataa 744  Q
      ||| ||||||| ||||||||||||||| ||||||| ||| ||||||    
T  43045736 taagcttttttcaacttattttcataagttctccaatatagtttataa 43045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 26559864 - 26559910
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaa 375  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||    
T  26559864 aattgattttgagtgaattgatttgataaaattgattctaactaaaa 26559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 628 - 753
Target Start/End: Complemental strand, 28763496 - 28763371
Alignment:
Q  628 ttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagc-atttttcagcttattttcataagta 726  Q
    ||||||| | ||| ||||||||  |||||  ||||||||||| |||||||||||||||  ||||||||   |||  ||||||| |||| ||||||||||     
T  28763496 ttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttcaactta-tttcataagtt 28763398  T
Q  727 ctccaatctagcttataaacacaactt 753  Q
    |  |||| ||||||||||| |||||||    
T  28763397 cagcaatatagcttataaaaacaactt 28763371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 32994153 - 32994215
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 391  Q
    |||||||||| | |||| ||||| ||||||||||||||| ||| ||| ||| |||||||||||    
T  32994153 aattgattttgaatgaactgattatgtaaaattgattctggctgaaagtgagttgaaggtaaa 32994215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 35550347 - 35550309
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgatt 365  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  35550347 aaaattgattttgattgaattgattttgtaaaattgatt 35550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 759 - 829
Target Start/End: Original strand, 37444493 - 37444563
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    ||||||||||||||||||  ||||||||||  ||||  ||||||| ||  || ||||||||||||||||||    
T  37444493 cgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttatcatgataag 37444563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 37684458 - 37684384
Alignment:
Q  439 ttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||||| |||||||||||||   || | ||| |||||| |||||||||||||  || ||||||||||||    
T  37684458 ttaaaatcaattttagaatcaaaagccacaaatcctaacttcaagtagaatcaattctggagacaaaatcaattc 37684384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 405
Target Start/End: Original strand, 38715192 - 38715270
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||||| | ||||||||||||| | |||||||| ||| ||||| ||| || |  ||||||||| |||||||||    
T  38715192 aaaattgattttaattgaattgattttgcagaattgattttagttaaaattgagttaagtgtaaagtgatttatgtttg 38715270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 759 - 825
Target Start/End: Original strand, 41475138 - 41475204
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatga 825  Q
    |||||||||||||||| | ||||||||||| |||||||| ||||| ||  || || |||||||||||    
T  41475138 cgaaaacaatttaactgtattttatcttttgctataaaattagcttatacataagtgcttatcatga 41475204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 531
Target Start/End: Original strand, 4662926 - 4663027
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaacca 529  Q
    ||||| |||| |||||||||| ||||| ||||||||  || | |||||||||| |||||| |||||   | ||||||||||||| |   |||||||||||    
T  4662926 atttgtgtgtaaaaatcaattctagaaacaaaagctacaaatcctagcttcaagtagaataaattccggatgcaaaatcaattctatccgaaagcaacca 4663025  T
Q  530 aa 531  Q
    ||    
T  4663026 aa 4663027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 790 - 867
Target Start/End: Complemental strand, 5404578 - 5404501
Alignment:
Q  790 ctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||||||||||| || ||  || | |||||||||||||||||| | || ||| || |||||||| |||||||||||    
T  5404578 ctataaaaatagcttatatacaagtggttatcatgataagcacttattctttaatctgcaaataagttgtttatccaa 5404501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 328 - 381
Target Start/End: Complemental strand, 5893385 - 5893332
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaat 381  Q
    ||||||||||| ||| |||||||| ||||||||||||| |  ||||||||||||    
T  5893385 aaattgattttgagttaattgattctgtaaaattgattgtgactaaaaatgaat 5893332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 430 - 515
Target Start/End: Complemental strand, 8693823 - 8693738
Alignment:
Q  430 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaa 515  Q
    |||||||| | ||| ||||||||||||||| ||| |  || || ||| |||||||| |||||| |||| ||||||| |||||||||    
T  8693823 atttgagtataaaagtcaattatagaatcacaagttacaacttatagtttcaactataatcaactctagaggcaaattcaattcaa 8693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 760 - 829
Target Start/End: Original strand, 16210965 - 16211034
Alignment:
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 829  Q
    ||||||||| ||||||| ||||||| ||| ||||| |||||||| ||  ||||| || ||||||||||||    
T  16210965 gaaaacaatgtaactttattttatcatttactatagaaatagcttatacatgagtgcgtatcatgataag 16211034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 603 - 644
Target Start/End: Complemental strand, 26479938 - 26479897
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaag 644  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  26479938 cctgtttggattgacttatttaagcttatctattgacacaag 26479897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 391
Target Start/End: Original strand, 32681238 - 32681279
Alignment:
Q  350 ttttgtaaaattgattctagctaaaaatgaattgaaggtaaa 391  Q
    ||||||||||||||||||  ||||||||||||||||| ||||    
T  32681238 ttttgtaaaattgattctcactaaaaatgaattgaagataaa 32681279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 704 - 789
Target Start/End: Original strand, 39881770 - 39881855
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatcttttt 789  Q
    |||||||||||||| ||||||  |||||   ||||||||||| |||| || | | | |||||||||| ||||| ||||||||||||    
T  39881770 ttttcagcttatttccataagctctccatgatagcttataaaaacaatttatttacaaaaacaatttgactttattttatcttttt 39881855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 5e-25; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 378 - 496
Target Start/End: Complemental strand, 41788439 - 41788312
Alignment:
Q  378 gaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaattatagaatcaaaagctcta 468  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||         ||| ||||||||||||||||||||||||||||| ||||||| |  |    
T  41788439 gaattgaaggtaaagtgatttatgtttgtatacattaatataaaagtgagttgaacagcaaatttgagtgttaaaatcaattatagactcaaaagtttca 41788340  T
Q  469 atttctagcttcaactagaatcaattct 496  Q
    ||||||||||| || |||||||||||||    
T  41788339 atttctagctttaagtagaatcaattct 41788312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 432 - 512
Target Start/End: Complemental strand, 27571922 - 27571842
Alignment:
Q  432 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||  ||| ||||||||||    
T  27571922 ttgagtgttaaaatcaattctagaatcaaaagctccaatttctaacttcaagtagaatcaattcttgaggtaaaatcaatt 27571842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 606 - 695
Target Start/End: Original strand, 34464141 - 34464230
Alignment:
Q  606 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    ||||||||||| | ||||||||||||||||||||| || |||| |||||||  ||||||| ||| |||||||||||||||| ||||||||    
T  34464141 gtttggattgatttatttgagtttatctattgacataaattttacaagactttttgggaggacttatgaaaacagcttatgacaattttc 34464230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 428 - 532
Target Start/End: Complemental strand, 45005084 - 45004980
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 527  Q
    ||||||||||| ||| ||||||| || |||||||  ||| ||||| ||||||||| ||||||||||||| |||||||||||||||| | | || ||||||    
T  45005084 aaatttgagtgctaagatcaattctataatcaaagcctccaatttttagcttcaagtagaatcaattctgaaggcaaaatcaattctattcgagagcaac 45004985  T
Q  528 caaac 532  Q
    |||||    
T  45004984 caaac 45004980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 329 - 551
Target Start/End: Complemental strand, 40491750 - 40491519
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataa-------- 420  Q
    |||||||||| |||||||||||| ||||||||||||| |  |||||| ||| ||||||||||||||| |||| |||| ||||||| || |||            
T  40491750 aattgattttgagtgaattgattctgtaaaattgattttgactaaaagtgagttgaaggtaaagtgatttatttttggatacattcatgtaaaagtgagt 40491651  T
Q  421 -aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtgg 519  Q
     ||||   ||||||| |||| ||| |||||| ||||||||||||||  ||    || |||||| |||| |||||||| |||||||||||||||    | |    
T  40491650 taaactttaaatttgtgtgtaaaagtcaattctagaatcaaaagctacaaaacttaacttcaagtagagtcaattctgaaggcaaaatcaattatcttcg 40491551  T
Q  520 aaagcaaccaaacttgttatactcaattctac 551  Q
    ||||||||||| | ||||| | ||||||||||    
T  40491550 aaagcaaccaaccatgttagaatcaattctac 40491519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 435 - 513
Target Start/End: Original strand, 5489874 - 5489952
Alignment:
Q  435 agtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||| |  ||||||||| |||||    
T  5489874 agtgttaaaatcaattatataatcaaaagctccaatttctagcatcaagtagaatcaattttggaggcaaaattaattc 5489952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 603 - 725
Target Start/End: Original strand, 19302480 - 19302602
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagca 702  Q
    |||||||| ||||||| ||||||| ||||||| ||||| ||||||||  ||| |  ||||||||| | |||||||||||||||| ||||||||   | |     
T  19302480 cctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaact 19302579  T
Q  703 tttttcagcttattttcataagt 725  Q
    ||||||| |||||||||||||||    
T  19302580 tttttcaacttattttcataagt 19302602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 599 - 803
Target Start/End: Complemental strand, 48470201 - 48469992
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    |||||||||| |||||| || ||||||| |||||||| |||| |||||||   ||| |  ||||||||||| |||||||||||||||| || |||||       
T  48470201 agggcctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcata 48470102  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaacacaac-----ttgtatgcgaaaacaatttaactttgttttatctttttctat 793  Q
    ||| ||||| ||||||| |||||||||  | |||  |||||||| || |||||     || ||| | |||||||||||||||  ||||||||||| || |    
T  48470101 agcttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatcttttgctgt 48470002  T
Q  794 aaaaatagct 803  Q
    | ||||||||    
T  48470001 agaaatagct 48469992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 762 - 873
Target Start/End: Original strand, 20881717 - 20881828
Alignment:
Q  762 aaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgttt 861  Q
    |||||||||||||| |||||||||||| ||||| | |||||| ||  || || |||||||||||||||  ||| | |||||||||||||||||| ||||     
T  20881717 aaacaatttaacttcgttttatcttttgctatagatatagctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataagttgttc 20881816  T
Q  862 atccaagcattt 873  Q
    ||| || |||||    
T  20881817 atctaaacattt 20881828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 601 - 695
Target Start/End: Original strand, 4970707 - 4970801
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 695  Q
    |||||||||||||||||| ||||||| ||||||  ||||| |||| |||  |||||  ||||||||||| ||||||||| |||||| ||||||||    
T  4970707 ggcctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttc 4970801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 344 - 422
Target Start/End: Original strand, 40795917 - 40795995
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||  ||||| ||| ||||||| || |||||    
T  40795917 aattgattttgtaaaattgatgttaggtaaaaatgaattgaaggtaaagtggtttatgattggatacattcatgtaaaa 40795995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 30182310 - 30182383
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||  ||||| ||||||||| |||||||||||    
T  30182310 aaacaataaatttgagtgtaaaaattaattctagaatcaaaagctacaatttttagcttcaagtagaatcaatt 30182383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 620 - 745
Target Start/End: Original strand, 33601344 - 33601469
Alignment:
Q  620 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttc 719  Q
    ||||||| |||||||||| || ||||||||  |||||| ||  ||||||| |||||||||||||||| || |||||   ||| ||||||||||||  |||    
T  33601344 atttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaattc 33601443  T
Q  720 ataagtactccaatctagcttataaa 745  Q
    |||||| ||| ||  |||||||||||    
T  33601444 ataagttctctaagatagcttataaa 33601469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 428 - 497
Target Start/End: Original strand, 38123687 - 38123756
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 497  Q
    |||||||||||| |||||||||| |||||| | |||||  ||||||||||||||| ||||||||||||||    
T  38123687 aaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 38123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 39734639 - 39734691
Alignment:
Q  343 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtga 395  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  39734639 gaattgattttgtaaaattgattctagctaaaactgagtttaaggtaaagtga 39734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 761 - 809
Target Start/End: Complemental strand, 46078137 - 46078089
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||    
T  46078137 aaaacaatttaactttgttttatctttttctataaaaataacttatgta 46078089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 659 - 741
Target Start/End: Complemental strand, 420457 - 420375
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 741  Q
    ||||||||||| |||||||||  ||||| || ||||||  ||| ||||||| ||||||||||||||| ||||||| |||||||    
T  420457 ttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttcataagttctccaatatagctta 420375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 358 - 513
Target Start/End: Complemental strand, 15050436 - 15050271
Alignment:
Q  358 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaa 448  Q
    ||||||||||||||||||||||||| | |||||||| | ||||||||| ||| ||||  ||||||         || | | |||| | ||| ||||||||    
T  15050436 aattgattctagctaaaaatgaatttagggtaaagtaatttatgtttggatatatttccataaaagtgggttgaaccaaacatttcattgtaaaaatcaa 15050337  T
Q  449 ttatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaattc 513  Q
    || ||||||  |||||||||||||||||||||||  |  ||||||||||| | |||||||||||||    
T  15050336 ttttagaatggaaagctctaatttctagcttcaagattaaatcaattctacaagcaaaatcaattc 15050271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 605 - 742
Target Start/End: Complemental strand, 20526597 - 20526460
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 704  Q
    |||||||||||||| ||||||||||||||||||  | || |||||  |||||  ||| ||||||| |||||||||| ||||  || |||||   |||  |    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgt 20526498  T
Q  705 tttcagcttattttcataagtactccaatctagcttat 742  Q
    ||| ||||||||||||| ||| ||||||  ||||||||    
T  20526497 ttttagcttattttcattagttctccaaaatagcttat 20526460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 329 - 426
Target Start/End: Original strand, 42481803 - 42481900
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaacaa 426  Q
    |||||||||| |||||||||||| |||||||||||||||    |||| ||| ||||| ||||| ||| ||||||| | || ||||||| |||||||||    
T  42481803 aattgattttaagtgaattgattatgtaaaattgattctgaaaaaaagtgagttgaatgtaaaatgatttatgttcggatgcatttatctaaaaacaa 42481900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 35105330 - 35105254
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||| |||||||||||||| ||||||||||||| | | ||| || |||||| | ||||||| |||||||||    
T  35105330 aattgattttgagtgaattgattttttaaaattgattctggatgaaagtggattgaatgaaaagtgatttatgtttg 35105254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 812 - 864
Target Start/End: Original strand, 38500059 - 38500111
Alignment:
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatc 864  Q
    ||||||||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  38500059 agcgcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatc 38500111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 659 - 750
Target Start/End: Original strand, 11619131 - 11619222
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 750  Q
    ||||||||| | ||||||||| |||||| ||||||||   ||| ||||||| |||| |||||||||| ||||||  ||||||||||| ||||    
T  11619131 ttgggagaatttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaa 11619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 761 - 800
Target Start/End: Complemental strand, 20269566 - 20269527
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaata 800  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  20269566 aaaacaatttaactttgttttatcttttgctataaaaata 20269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 659 - 750
Target Start/End: Original strand, 21568468 - 21568559
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 750  Q
    ||||||||||| |||||||||||||||  ||||||||   |||  |||||| |||| || ||||||| ||||||| ||||||||||| ||||    
T  21568468 ttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaacaa 21568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 358 - 413
Target Start/End: Original strand, 29829311 - 29829366
Alignment:
Q  358 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||||||| ||||||||||| ||||| ||||||||| ||||||||| |||||||    
T  29829311 aattgattctggctaaaaatgagttgaatgtaaagtgatttatgtttggatacatt 29829366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 765 - 867
Target Start/End: Complemental strand, 39279749 - 39279646
Alignment:
Q  765 caatttaactttgttttatctttttctataaaaatagctaatgt-atgagcgcttatcatgataagcacttctactataaactacaaataagctgtttat 863  Q
    |||||||||||||||||||||||| ||||| ||| |||| |||| || ||| ||||| || |||||| ||| | |  |||  ||||||||||||||||||    
T  39279749 caatttaactttgttttatcttttgctatagaaacagcttatgtaataagcacttattataataagcccttgtgccttaagatacaaataagctgtttat 39279650  T
Q  864 ccaa 867  Q
    ||||    
T  39279649 ccaa 39279646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 48158913 - 48158991
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaa-tgaattgaaggtaaagtgaattatgtttgt 406  Q
    ||||||||| | ||||||||||||||||| ||||||||| | ||||||| ||| ||||||||||| || |||||||||||    
T  48158913 aaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatg-attatgtttgt 48158991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 659 - 753
Target Start/End: Original strand, 19022558 - 19022652
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||| | ||||||||| |||||| ||||||||   ||   | |||| ||||||||||||||| ||||||| ||||||||||| |||||||    
T  19022558 ttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaactt 19022652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 817 - 867
Target Start/End: Original strand, 27863843 - 27863893
Alignment:
Q  817 ttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||||||||||||||| | |||||| ||||||||||| |||||||||||    
T  27863843 ttatcatgataagcacttgtgctataagctacaaataagttgtttatccaa 27863893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 803
Target Start/End: Original strand, 28613614 - 28613656
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  28613614 aaaacaatttaactttgttttatcttttgttataaaaatagct 28613656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 613 - 753
Target Start/End: Original strand, 45790357 - 45790492
Alignment:
Q  613 ttgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagct 712  Q
    |||||| |||||| |||||||||||||| |||||||  | || |  || |||||||| ||||||| | |||||| |||||||    ||| ||||||||||    
T  45790357 ttgacttatttgaatttatctattgacataagtttt--atgagt--ttcggagaacttatgaaaataacttatgacaatttttaaaagc-tttttcagct 45790451  T
Q  713 tattttcataagtactccaatctagcttataaacacaactt 753  Q
    |||||||||||||  |||||| ||| ||||||| |||||||    
T  45790452 tattttcataagttatccaatatagtttataaaaacaactt 45790492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 647 - 732
Target Start/End: Original strand, 38499874 - 38499959
Alignment:
Q  647 ttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaa 732  Q
    |||| |||||| |||||||||||  | ||||||||||||| || |||||   ||| |||| |||||||||||||||||| ||||||    
T  38499874 ttgcgagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaa 38499959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 597862 - 597918
Alignment:
Q  335 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 391  Q
    ||||||||||||||| | ||||||||||||| | ||||||| ||| |||||||||||    
T  597862 tttttagtgaattgagtatgtaaaattgattttggctaaaactgagttgaaggtaaa 597918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 428 - 512
Target Start/End: Complemental strand, 1411026 - 1410942
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||| |||| |||||||||| || || ||||| ||  || || || |||||| |||||||||||||||||||||||| ||||    
T  1411026 aaatttgcgtgtgaaaatcaattctaaaaacaaaatctacaaattataacttcaaatagaatcaattctaaaggcaaaattaatt 1410942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 815 - 867
Target Start/End: Original strand, 21568772 - 21568824
Alignment:
Q  815 gcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||||||||||||||||| | |||||| || |||| |||||||||||||||    
T  21568772 gcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaa 21568824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 597 - 649
Target Start/End: Complemental strand, 33673236 - 33673184
Alignment:
Q  597 ctagggcctgtttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||| ||||    
T  33673236 ctagggcctttttggattgactcatttgagcttatctactgacataagctttg 33673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 428 - 512
Target Start/End: Original strand, 41386836 - 41386920
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||| |||| || ||||||| |||||| |||||||  || | |||||||||| ||||||||||||| ||||  |||||||||    
T  41386836 aaatttgtgtgtaaatatcaattctagaattaaaagctacaaatcctagcttcaagtagaatcaattctgaaggtgaaatcaatt 41386920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 761 - 800
Target Start/End: Original strand, 11700346 - 11700385
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaata 800  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  11700346 aaaacaatgtaactttattttatctttttctataaaaata 11700385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 421 - 512
Target Start/End: Original strand, 23441244 - 23441335
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||||||||| || ||||||||||  | |||||||||  | || ||||| ||  |||||||||||||| |  ||||||||||||||    
T  23441244 aaacaacaaatttgagggtcaaaatcaattccaaaatcaaaagtcccaacttctaactctaactagaatcaattatggaggcaaaatcaatt 23441335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 812 - 867
Target Start/End: Complemental strand, 40196306 - 40196251
Alignment:
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||||| | | | || ||||||||||||||| |||||||||||    
T  40196306 agcgcttatcatgataagcgcatgtgctgtaaactacaaataagttgtttatccaa 40196251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 422 - 496
Target Start/End: Original strand, 597961 - 598034
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattct 496  Q
    ||||| |||||| ||||  | |||||||||||||||| ||||||  ||||| ||||||||| |||||||||||||    
T  597961 aacaataaattttagtgcaagaatcaattatagaatcgaaagctacaattt-tagcttcaagtagaatcaattct 598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 659 - 753
Target Start/End: Original strand, 19214379 - 19214473
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||||| |||||||||||  ||| ||||||||   | | | ||||| ||||||||||||||| || |||| ||||||||| | |||||||    
T  19214379 ttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagttctacaatatagcttatacaaacaactt 19214473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 659 - 733
Target Start/End: Complemental strand, 28614530 - 28614456
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaat 733  Q
    ||||||||||| ||||||||| | |||  |||||||| | ||| |||||||| ||| |||||||||| |||||||    
T  28614530 ttgggagaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaat 28614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 443 - 493
Target Start/End: Original strand, 28725088 - 28725138
Alignment:
Q  443 aatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaat 493  Q
    |||||||||||||||||||||||  || |||||||||||| || |||||||    
T  28725088 aatcaattatagaatcaaaagctacaaattctagcttcaagtataatcaat 28725138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 603 - 649
Target Start/End: Complemental strand, 44822111 - 44822065
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    |||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  44822111 cctgtttggattgacttatttgagtttatctgctgacataagttttg 44822065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 755 - 801
Target Start/End: Complemental strand, 45004762 - 45004716
Alignment:
Q  755 tatgcgaaaacaatttaactttgttttatctttttctataaaaatag 801  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||||    
T  45004762 tatgcaaatacaatttaactttattttatcttttgctataaaaatag 45004716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 703 - 745
Target Start/End: Original strand, 46280289 - 46280331
Alignment:
Q  703 tttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||    
T  46280289 tttttcagcctattttcataagttctccaatatagcttataaa 46280331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 404
Target Start/End: Original strand, 5489781 - 5489857
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 404  Q
    ||||||| |||| |||||||||||| ||| ||||||||||  | ||||||||| ||||| ||||||| | ||||||||    
T  5489781 aaaattggttttaagtgaattgattgtgt-aaattgattccggttaaaaatgagttgaatgtaaagttatttatgttt 5489857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 421 - 510
Target Start/End: Complemental strand, 23458130 - 23458041
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaa 510  Q
    |||||||||||||||| || |||||||||| || | |||||||  | || ||||| ||  |||||||||||||| |  ||||||||||||    
T  23458130 aaacaacaaatttgagggtcaaaatcaattctaaattcaaaagtcccaacttctaactctaactagaatcaattatggaggcaaaatcaa 23458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 672 - 745
Target Start/End: Original strand, 30570917 - 30570990
Alignment:
Q  672 tgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    ||||||||||||||| ||||||||   ||| |||||||  ||| |||||||||| ||||||| ||| |||||||    
T  30570917 tgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaa 30570990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 372 - 413
Target Start/End: Complemental strand, 35222115 - 35222074
Alignment:
Q  372 aaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 413  Q
    |||||| | ||||||||||||||| |||||||||||||||||    
T  35222115 aaaaattagttgaaggtaaagtgatttatgtttgtatacatt 35222074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 36517735 - 36517650
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctt 683  Q
    ||||||||||||||||| | | ||||||| ||| ||| || || |||||||  ||||||  ||||||||||| || ||||||||||    
T  36517735 tagggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagctt 36517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 834
Target Start/End: Complemental strand, 40009460 - 40009387
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcactt 834  Q
    |||||||||||||||| |||| ||||||  |||||||| |||| ||  || |||||| ||||||||||| ||||    
T  40009460 aaaacaatttaactttattttgtcttttgttataaaaacagcttatacataagcgctaatcatgataagtactt 40009387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 344 - 409
Target Start/End: Original strand, 44856719 - 44856784
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 409  Q
    ||||||||| ||||| ||||||||  |||||| ||| ||||| |||||| || |||||||||||||    
T  44856719 aattgatttggtaaagttgattctgcctaaaagtgagttgaatgtaaagcgatttatgtttgtata 44856784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 761 - 798
Target Start/End: Complemental strand, 45264085 - 45264048
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaa 798  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  45264085 aaaacaatttaactttatttcatctttttctataaaaa 45264048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 5e-25; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 606 - 733
Target Start/End: Complemental strand, 9107240 - 9107113
Alignment:
Q  606 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcattt 705  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||  ||| |  |||||||||||||||||||||||||| | |||||||| | | | |||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttt 9107141  T
Q  706 ttcagcttattttcataagtactccaat 733  Q
    ||| ||| |||||||||||| |||||||    
T  9107140 ttctgctaattttcataagttctccaat 9107113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 604 - 867
Target Start/End: Original strand, 9202666 - 9202934
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 703  Q
    |||| |||||||||| ||||||| ||||||  || || |||||||| ||||||  || ||| |||| ||| |||||||||||| || | |||   |||      
T  9202666 ctgtatggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctg 9202765  T
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgt-----atgcgaaaacaatttaactttgttttatctttttctataaaaa 798  Q
    ||| |||||||||||||||||| || |||  || ||||| || ||| ||| |     ||  ||||||||||||||||| ||||||||||| ||| | |||    
T  9202766 tttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaa 9202865  T
Q  799 tagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||| || ||| ||| ||||||||||||| ||||| | |||||| || |||||||| |||||||||||    
T  9202866 tagcttatatataagcacttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaa 9202934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 599 - 742
Target Start/End: Original strand, 7705911 - 7706054
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    |||||||||||||||||||| |||||||  |||||| |  || ||||||||  |  ||| ||||||||||| |||||||||||||||| || ||||| |     
T  7705911 agggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacc 7706010  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttat 742  Q
     || |||||| ||||||||||| |||| ||||||| ||||||||    
T  7706011 tgcttttttcggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 599 - 745
Target Start/End: Original strand, 12857251 - 12857397
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||| |||||||||||  | ||||||| ||||||||||||  ||||||||  | |||  |  |||||||| ||||||||| |||||| |||||||| |     
T  12857251 agggcttgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcaca 12857350  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    ||| ||||||||||||||||  ||||| ||||||| |||||||||||    
T  12857351 agcttttttcagcttatttttgtaagttctccaatatagcttataaa 12857397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 599 - 745
Target Start/End: Original strand, 12857618 - 12857764
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||| |||||||||||  | ||||||| | ||||||||||  ||||||||  | |||  |  |||||||| ||||||||| |||||| |||||||| |     
T  12857618 agggcttgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcaca 12857717  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  12857718 accttttttcagcttattttcataagttctccaatatagcttataaa 12857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 603 - 753
Target Start/End: Original strand, 16937800 - 16937950
Alignment:
Q  603 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagca 702  Q
    ||||||||||||| || ||||||| ||||||| |  || ||||||||  ||| |  |||| |||||| |||||||||||||||| ||| ||||   |||     
T  16937800 cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagct 16937899  T
Q  703 tttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||||||||||| ||||| ||||||| |||| |||||| |||||||    
T  16937900 tttttcagcttattttcctaagttctccaatatagcgtataaaaacaactt 16937950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 600 - 732
Target Start/End: Complemental strand, 10640109 - 10639977
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    |||||||||||||||  || ||||||||||||||| ||||| ||||||||  | | |  ||||||||||| |||||||||||||||| || |||||   |    
T  10640109 gggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa 10640010  T
Q  700 gcatttttcagcttattttcataagtactccaa 732  Q
    || ||||  ||||||||||||||||| ||||||    
T  10640009 gctttttctagcttattttcataagttctccaa 10639977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 329 - 411
Target Start/End: Complemental strand, 14299498 - 14299416
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 411  Q
    |||| ||||| |||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||| || |||||| |||||    
T  14299498 aatttattttgagtgaattgattgtgtaaaattgattctagataaaagtgagttgaaggtaaagtgatttgtgtttgaataca 14299416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 759 - 860
Target Start/End: Complemental strand, 12425563 - 12425462
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 858  Q
    |||||||||||||||||| ||||||||||| ||||| |||||| | ||  || |||| |||||||||||| ||||| |||||||| || |||||||| ||    
T  12425563 cgaaaacaatttaactttattttatcttttactatataaatagtttatacataagcgtttatcatgataaacacttgtactataagctgcaaataagatg 12425464  T
Q  859 tt 860  Q
    ||    
T  12425463 tt 12425462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 606 - 855
Target Start/End: Complemental strand, 39105615 - 39105360
Alignment:
Q  606 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactcctt-gggagaactcatgaaaacagcttatgtcaattttctcgagcatt 704  Q
    ||||||||||||| |||||||||||||||  |  | |||||||   |||||  || ||||||| | |||||||||||||||| || | |||   |||  |    
T  39105615 gtttggattgacttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctat 39105516  T
Q  705 tttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgcgaaaacaatttaactttgttttatctttttctataaaaat 799  Q
    ||| ||||||||||||||||| ||||||  |||||||| || |||  || ||     | |||||||||||||||||  ||| || |||  ||||| ||||    
T  39105515 ttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaat 39105416  T
Q  800 agctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataag 855  Q
    |||| ||  || ||||||||||||||||||||||| | |||||| || ||||||||    
T  39105415 agcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataag 39105360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 642 - 803
Target Start/End: Original strand, 16457935 - 16458100
Alignment:
Q  642 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 741  Q
    ||||||||  |||||  ||||||||||| |||||||||||||||| || |||||   |||  ||||||| ||||||||| |||| ||||||| ||||| |    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctca 16458034  T
Q  742 taaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    |||| |||||||      ||| | ||||||||||||  || ||||||||||| ||||||||||||||    
T  16458035 taaaaacaacttatagcatatacaaaaacaatttaa-gttattttatcttttgctataaaaatagct 16458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 605 - 750
Target Start/End: Complemental strand, 32009844 - 32009698
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc-tcgagcat 703  Q
    |||||||||||||  |||||||| ||||| |||||  ||||||||  |||||  |||| | |||| ||||||||||||| || |||||||| |  ||| |    
T  32009844 tgtttggattgacatatttgagtctatctgttgacctaagttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagctt 32009745  T
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaa 750  Q
    |||| | ||| ||||||||||| ||||||| ||||||||||| ||||    
T  32009744 ttttgaacttgttttcataagttctccaatatagcttataaaaacaa 32009698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 659 - 803
Target Start/End: Complemental strand, 29925938 - 29925789
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgt--- 755  Q
    ||||||||||| |||||||||||||||| |||| |||  | |  ||||||| ||||||||||||||| ||||||| ||||||||  | ||||||| |       
T  29925938 ttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttatagc 29925839  T
Q  756 --atgcgaaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
      || |  ||||||||||||  | ||||||||||| ||||||||||||||    
T  29925838 acatacagaaacaatttaacgctattttatcttttgctataaaaatagct 29925789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 436 - 513
Target Start/End: Original strand, 34250380 - 34250457
Alignment:
Q  436 gtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||| |||| ||||| ||||||||||||||  |||||||||| |||| |||||||||||||| ||||| |||||||||    
T  34250380 gtgtgaaaaacaattgtagaatcaaaagctacaatttctagcatcaagtagaatcaattctagaggcataatcaattc 34250457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 671 - 756
Target Start/End: Complemental strand, 37954771 - 37954686
Alignment:
Q  671 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta 756  Q
    ||||||||||||||||  |||||||   ||| ||||||| |||||||||||| || ||||||| ||||||||||| ||||||||||    
T  37954771 atgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaacaacttgta 37954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 600 - 803
Target Start/End: Original strand, 42500157 - 42500347
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    ||||||||||||||||  | |||||   ||| ||| ||||| ||||||||  |||||| |||| |||||| ||| ||||| |||| | ||||||||   |    
T  42500157 gggcctgtttggattggtttatttggacttacctactgacataagttttgtgagactctttgg-agaacttatggaaacaacttacgacaattttcataa 42500255  T
Q  700 gcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaat 799  Q
    || ||||||| ||||||||||||||| ||||||| ||||||||| |||||           |||||||||||||||| |||||||||||  |||||||||    
T  42500256 gc-tttttcaacttattttcataagttctccaatatagcttatatacaca-----------aaaacaatttaactttattttatcttttgatataaaaat 42500343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 767 - 867
Target Start/End: Original strand, 1465105 - 1465205
Alignment:
Q  767 atttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatcca 866  Q
    |||||||||| ||||||| | | ||||| |||||||| ||  || |||||||||| |||||||||||| | ||||||||| | ||||| |||||||||||    
T  1465105 atttaactttattttatcctatgctatagaaatagcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatcca 1465204  T
Q  867 a 867  Q
    |    
T  1465205 a 1465205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 441 - 512
Target Start/End: Original strand, 3738142 - 3738213
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||||||||||||||| ||  || ||||| |||||||||||||||||| |||||  ||||||||||    
T  3738142 aaaatcaattatagaatcaaaaactacaacttctaacttcaactagaatcaattttaaagttaaaatcaatt 3738213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 599 - 808
Target Start/End: Complemental strand, 39594964 - 39594751
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 698  Q
    ||||| |||||||||||||| ||||||| |||||||  |||| ||||||||  ||| |  |||||| |||| |||||||||||| | |  ||| || |      
T  39594964 agggcttgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttatta 39594865  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaacacaacttg-----tatgcgaaaacaatttaactttgttttatctttttctat 793  Q
    ||   |||||||||||||||||||||| |  |||  || ||||| || ||| |||      ||||||||||||||||| |||| ||||||||||||||||    
T  39594864 agttgttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaattta-ctttattttatctttttctat 39594766  T
Q  794 aaaaatagctaatgt 808  Q
    | |||||||| ||||    
T  39594765 agaaatagcttatgt 39594751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 421 - 482
Target Start/End: Original strand, 24306110 - 24306171
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |  |||||||| ||||||    
T  24306110 aaacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaa 24306171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 421 - 482
Target Start/End: Complemental strand, 24367206 - 24367145
Alignment:
Q  421 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |  |||||||| ||||||    
T  24367206 aaacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaa 24367145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 42858172 - 42858087
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||| |||| ||||||||||||||||| |||||||| || | ||| |||||| || ||||||||||| || |||||| |||||    
T  42858172 aaatttgtgtgtgaaaatcaattatagaattaaaagctccaaatcctaacttcaagtaaaatcaattctagagtcaaaatgaattc 42858087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 771 - 867
Target Start/End: Complemental strand, 28776955 - 28776859
Alignment:
Q  771 aactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||| ||||||||||||| |||||||||||| ||  || ||| ||||||||||||||  |||   |||||| || |||||||| |||||||||||    
T  28776955 aactttattttatctttttcaataaaaatagcttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaa 28776859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 600 - 732
Target Start/End: Complemental strand, 40426921 - 40426789
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 699  Q
    |||||||||| | |||||| ||||||| ||||||| ||||| || |||||  |||||  ||||| |  || |||||||||||||||| || |||||   |    
T  40426921 gggcctgttttggttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataa 40426822  T
Q  700 gcatttttcagcttattttcataagtactccaa 732  Q
    || ||||| ||||||||||| ||||| ||||||    
T  40426821 gcttttttaagcttattttcgtaagttctccaa 40426789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 659 - 725
Target Start/End: Original strand, 3735131 - 3735197
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagt 725  Q
    |||| |||||| |||||||||||||||| ||||||||   ||| ||||||||||||| |||||||||    
T  3735131 ttggtagaactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagt 3735197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 422 - 570
Target Start/End: Complemental strand, 10898791 - 10898644
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaattcaagtgga 520  Q
    ||||| ||||||| |||| |||||||||||  || |||| | ||| |||||||  |||||| | ||||||||||||| ||||||||||||||  | | ||    
T  10898791 aacaataaatttgtgtgtaaaaatcaatta--gattcaataactccaatttcttacttcaagttagaatcaattctagaggcaaaatcaattttactcga 10898694  T
Q  521 aagcaaccaaacttgttatactcaattctaccgctatagaatcaattttg 570  Q
     ||||||||||| ||| | | | ||||| || ||| ||||||||||||||    
T  10898693 gagcaaccaaacatgtcaaaattaattcgacagctctagaatcaattttg 10898644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 468 - 510
Target Start/End: Complemental strand, 14299765 - 14299723
Alignment:
Q  468 aatttctagcttcaactagaatcaattctaaaggcaaaatcaa 510  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  14299765 aatttctagcttcaactaaaatcaattctataggcaaaatcaa 14299723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 761 - 867
Target Start/End: Original strand, 19460466 - 19460572
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    |||||||||||||||| ||  || ||||  |||| |||||| | ||  || || ||||||||||||||||| || | |||||| || |||||||||||||    
T  19460466 aaaacaatttaactttattcaatgttttgatatagaaatagtttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtt 19460565  T
Q  861 tatccaa 867  Q
    |||||||    
T  19460566 tatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 599 - 649
Target Start/End: Complemental strand, 35299922 - 35299872
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttg 649  Q
    |||||||||||||||||||| ||||||| |||||||||||||  |||||||    
T  35299922 agggcctgtttggattgacttatttgagcttatctattgacatgagttttg 35299872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 598 - 743
Target Start/End: Original strand, 3932588 - 3932733
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 697  Q
    ||||| ||||||||||||||| ||||||| |||||||   ||| ||| ||||  |||||  ||| || ||||    |||||||||||||  |||||||      
T  3932588 tagggactgtttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcat 3932687  T
Q  698 gagcatttttcagcttattttcataagtactccaatctagcttata 743  Q
     ||| |||| |||||||||||| ||||| ||||| |||||||||||    
T  3932688 aagctttttacagcttattttcgtaagttctccagtctagcttata 3932733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 704 - 836
Target Start/End: Original strand, 4014442 - 4014579
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgcgaaaacaatttaactttgttttatctttttctataaaaa 798  Q
    |||||||||||||||||||||| ||||||  |||||||| || ||| ||| |      | | |||||||| ||||||| ||||||||||| ||||| |||    
T  4014442 ttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatcttttgctatagaaa 4014541  T
Q  799 tagctaatgtatgagcgcttatcatgataagcacttct 836  Q
    ||||| ||  ||  |||||||||||||| ||| |||||    
T  4014542 tagcttatacataggcgcttatcatgatgagcgcttct 4014579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 428 - 513
Target Start/End: Complemental strand, 36640001 - 36639916
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||||| |||| ||||| |||||| | |||||  |||||| |||||||| ||||||| ||| |  |||||||||||||||    
T  36640001 aaatttgagtgtaaaaaacaattctagaattagaagctacaatttccagcttcaagtagaatctattttggaggcaaaatcaattc 36639916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 759 - 832
Target Start/End: Original strand, 42569058 - 42569131
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcac 832  Q
    |||||||||||  ||||| ||||||||||| ||||| ||||||||  |  || |||||||||||||||||||||    
T  42569058 cgaaaacaattagactttattttatcttttgctatagaaatagctttttcataagcgcttatcatgataagcac 42569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 5465398 - 5465458
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 404  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| | ||| ||| ||||||||    
T  5465398 aattgattttgtaaaattgattttagataaaagtgaattgaatgaaaaatgatttatgttt 5465458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 760 - 828
Target Start/End: Complemental strand, 7674639 - 7674571
Alignment:
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataa 828  Q
    ||||||||||||| ||| |||||||||||  |||| |||||||| || ||| || ||||||||||||||    
T  7674639 gaaaacaatttaaatttattttatcttttggtatagaaatagcttatatataagtgcttatcatgataa 7674571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 801
Target Start/End: Complemental strand, 14932280 - 14932240
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatag 801  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatag 14932240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 473 - 513
Target Start/End: Complemental strand, 29922075 - 29922035
Alignment:
Q  473 ctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  29922075 ctagcttcaactagaatcaattctacaagcaaaatcaattc 29922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Complemental strand, 35446045 - 35445997
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    |||||||||||||||| ||||||| ||| |||||||||||||| |||||    
T  35446045 aaaacaatttaactttattttatcatttgctataaaaatagcttatgta 35445997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 761 - 864
Target Start/End: Complemental strand, 465944 - 465841
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    |||||||||||||||| |||||||||||   ||| |||||||| || ||| || ||||||||||| | |  ||| |  |||||||| |||||||| ||||    
T  465944 aaaacaatttaactttattttatcttttgtcatagaaatagcttatatataagtgcttatcatgaaatgagcttatgttataaactgcaaataagttgtt 465845  T
Q  861 tatc 864  Q
    ||||    
T  465844 tatc 465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 707699 - 707644
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaatt 382  Q
    ||||||||||||  ||||||||||| ||||| |||||||| | |||||||||||||    
T  707699 aaaattgattttgcgtgaattgattatgtaagattgattccaactaaaaatgaatt 707644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 4848064 - 4848111
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaa 374  Q
    |||||||||||| |||||||| || |||||| ||||||||||||||||    
T  4848064 aaaattgattttgagtgaattaatgttgtaagattgattctagctaaa 4848111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 4975053 - 4975147
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    ||||| ||||| |||||||||||||| |||| |||||||||||||||| | ||||||| | ||| ||  ||||||||  ||||||| |||| ||||    
T  4975053 aaattaattttcagtgaattgattttataaa-ttgattctagctaaaattaaattgaaagcaaaatgctttatgttttgatacattcatatgaaaa 4975147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 6095243 - 6095338
Alignment:
Q  328 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    ||||| ||||| ||| |||||||||  ||||||||||||||| ||| ||||| ||||  | ||| ||| ||||||||| ||| |||||| ||||||    
T  6095243 aaattaattttgagtaaattgatttgataaaattgattctagataataatgagttgattgaaaaatgatttatgtttgaatatatttatgtaaaaa 6095338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 766 - 809
Target Start/End: Complemental strand, 9107097 - 9107054
Alignment:
Q  766 aatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||    
T  9107097 aatttaactttattttatctttttctttaaaaatagcttatgta 9107054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 422
Target Start/End: Complemental strand, 14671198 - 14671104
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||| ||||||| | |||||||||||||| ||||||||| | ||||||| ||||||||| || |||| | ||||||||| || |||| || |||||    
T  14671198 aaaaatgattttgaatgaattgattttgtgaaattgattatggctaaaagtgaattgaatgtgaagt-atttatgtttggatgcattcatgtaaaa 14671104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 602 - 637
Target Start/End: Complemental strand, 29336784 - 29336749
Alignment:
Q  602 gcctgtttggattgactcatttgagtttatctattg 637  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29336784 gcctgtttggattgaatcatttgagtttatctattg 29336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 403
Target Start/End: Original strand, 35138947 - 35139010
Alignment:
Q  340 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtt 403  Q
    |||||||||||| |||||| ||||||||  |||||| ||| ||||||||||| ||| |||||||    
T  35138947 agtgaattgattatgtaaacttgattctgtctaaaattgagttgaaggtaaaatgatttatgtt 35139010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 469 - 512
Target Start/End: Original strand, 35139093 - 35139136
Alignment:
Q  469 atttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    |||||||||||||| || ||||||||||| ||||||||||||||    
T  35139093 atttctagcttcaagtaaaatcaattctagaggcaaaatcaatt 35139136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 441 - 532
Target Start/End: Original strand, 43310574 - 43310665
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaac 532  Q
    |||||||||| || |||||||||||  |||||||| |||||| ||  | |||||||||| | ||||||||||| | | |||| |||||||||    
T  43310574 aaaatcaattctataatcaaaagctacaatttctatcttcaaataacaacaattctaaaagtaaaatcaattctactcgaaaacaaccaaac 43310665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 117420 - 117502
Alignment:
Q  340 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||||| ||||| |||||||||  ||| || ||| ||||||||||| ||| | ||||||| |||||| ||| |||||    
T  117420 agtgaattgattatgtaatattgattctgactagaagtgagttgaaggtaaaatgattcatgtttggatacatctatgtaaaa 117502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 2124282 - 2124244
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgatt 365  Q
    |||||||||||| || |||||||||||||||||||||||    
T  2124282 aaaattgattttaagagaattgattttgtaaaattgatt 2124244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 761 - 803
Target Start/End: Original strand, 37112338 - 37112380
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  37112338 aaaacaatttaactttgttttatcttttgctgtagaaatagct 37112380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 761 - 866
Target Start/End: Complemental strand, 39248090 - 39247984
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaa-ctacaaataagctgt 859  Q
    |||||||||||| ||| |||||   ||| ||||| ||||||||  |  || |||||||||||| ||||||| || | ||||||| || ||||||||||||    
T  39248090 aaaacaatttaaatttattttagtatttgctatagaaatagcttttacataagcgcttatcatcataagcaattatgctataaagctgcaaataagctgt 39247991  T
Q  860 ttatcca 866  Q
    |||||||    
T  39247990 ttatcca 39247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 699 - 753
Target Start/End: Complemental strand, 43300935 - 43300881
Alignment:
Q  699 agcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||| ||||||||||||||||||||| ||||||  ||||||| ||| |||||||    
T  43300935 agcatgtttcagcttattttcataagttctccaagatagcttacaaaaacaactt 43300881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 7667645 - 7667588
Alignment:
Q  457 tcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaattc 513  Q
    |||||||||| || |||||||||||| | |||||||||||| |||||||| |||||||    
T  7667645 tcaaaagctccaaattctagcttcaagttagaatcaattctgaaggcaaagtcaattc 7667588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 18585325 - 18585394
Alignment:
Q  425 aacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    ||||||||||| | ||||||| |||| |||| ||||||||| |||||| |||||| || || ||||||||    
T  18585325 aacaaatttgattattaaaataaattttagattcaaaagctttaatttttagcttgaagtaaaatcaatt 18585394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 33608555 - 33608482
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaattc 513  Q
    |||||| ||| |||||| |||| ||| || |||||||||||| | |||||||||||| ||||||||| ||||||    
T  33608555 aaaatccattctagaatgaaaaactccaacttctagcttcaagttagaatcaattctcaaggcaaaaccaattc 33608482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 620 - 685
Target Start/End: Original strand, 35445778 - 35445843
Alignment:
Q  620 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttat 685  Q
    ||||||||||||||| ||||| ||||||||  |||||| |||  |||| | |||||||||||||||    
T  35445778 atttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 35445843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 36927785 - 36927744
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    |||||||||| |||||| ||||||||||| ||||||||||||    
T  36927785 aaaatcaattttagaattaaaagctctaaattctagcttcaa 36927744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 601 - 634
Target Start/End: Original strand, 40335788 - 40335821
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatcta 634  Q
    |||||||||||||||||| |||||||||||||||    
T  40335788 ggcctgtttggattgacttatttgagtttatcta 40335821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 5e-22; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 10324953 - 10325043
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||| |||||||||||| |||||||||||||||||||||||||  |||||||| |||||| |||| ||||||||| ||||||||| ||||    
T  10324953 aacaataaatttgagtgtaaaaatcaattatagaatcaaaagctacaatttctatcttcaagtagactcaattctagaggcaaaattaatt 10325043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 611 - 753
Target Start/End: Complemental strand, 49938892 - 49938750
Alignment:
Q  611 gattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcag 710  Q
    |||||||| |||||||||||| |  || || ||||||||  ||| |  ||||||||||| |||||||||||||||| ||||||||   ||| |||||||     
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaa 49938793  T
Q  711 cttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||    
T  49938792 cttattttcataagttctctaatatagcttataaaaacaactt 49938750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 329 - 490
Target Start/End: Complemental strand, 3515979 - 3515820
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaacaaca 428  Q
    ||||| |||| |||||||||||| ||||||||||||||| |  |||| ||| |||||||| |||||| || |||||| |||||||||  |   ||  | |    
T  3515979 aattggttttgagtgaattgattatgtaaaattgattctggtgaaaattgagttgaaggtgaagtgatttgtgtttggatacatttagtt--gaatgata 3515882  T
Q  429 aatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatc 490  Q
    | ||||||||| |||||||||| |||||| |||||||  ||||||||||||||| |||||||    
T  3515881 attttgagtgtaaaaatcaattctagaatgaaaagctacaatttctagcttcaagtagaatc 3515820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 761 - 867
Target Start/End: Complemental strand, 30581792 - 30581686
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 860  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| |||||| |  ||||||||||| ||| |||| | |||||| || ||||||| |||||    
T  30581792 aaaacaatttaactttatttcatcgttttctataaaaatagcttatgtataactgcttatcatgaaaagtacttgttctataagctgcaaataaactgtt 30581693  T
Q  861 tatccaa 867  Q
    |||||||    
T  30581692 tatccaa 30581686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 604 - 753
Target Start/End: Original strand, 3233933 - 3234082
Alignment:
Q  604 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 703  Q
    ||||||||||||||| ||||||| ||||||| || |  ||||||||  |||||  | ||||||||| ||||||||| |||||  || |||||   ||  |    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt 3234032  T
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    |||||  ||||||||||||||| ||||||| ||||||||||| |||||||    
T  3234033 ttttctacttattttcataagttctccaatatagcttataaaaacaactt 3234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 601 - 745
Target Start/End: Complemental strand, 2295251 - 2295107
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    |||||||||| |||| || ||||||| ||||||| || || ||||||||  |||||  ||||||||||| |||||||||||||||| ||||||||   ||    
T  2295251 ggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataag 2295152  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    |  | |||| |||||||||| |||| |||  || |||||||||||    
T  2295151 ctctattcaacttattttcacaagttctctgatatagcttataaa 2295107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 432 - 536
Target Start/End: Complemental strand, 6021864 - 6021760
Alignment:
Q  432 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaa 531  Q
    |||||||| |||||| ||||||||||||||||||  |  | |||||||||| ||||||| |||||| ||||||||||||||| | | |||| ||| ||||    
T  6021864 ttgagtgtaaaaatctattatagaatcaaaagctacatatcctagcttcaagtagaatcgattctagaggcaaaatcaattctacttgaaatcaatcaaa 6021765  T
Q  532 cttgt 536  Q
    |||||    
T  6021764 cttgt 6021760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 666 - 809
Target Start/End: Original strand, 37631539 - 37631687
Alignment:
Q  666 aactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtat-----gcg 760  Q
    |||| ||||||||||||| || |||||||| | ||| ||||||||||||||||||||||| ||||||| ||||||| ||| ||| ||  |||      |     
T  37631539 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatacaca 37631638  T
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||||||| |||  |||||||||| |||||||| |||||| |||||    
T  37631639 aaaacaatttagcttcattttatctttctctataaagatagcttatgta 37631687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 428 - 531
Target Start/End: Original strand, 28083909 - 28084012
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 527  Q
    ||||||| |||| ||||| |||||||||||||||||||  || |||||||||||| |||||||||||   ||| |||||||||||| | | |||| ||||    
T  28083909 aaatttgtgtgtaaaaattaattatagaatcaaaagctacaaattctagcttcaagtagaatcaattacgaagacaaaatcaattctactcgaaaacaac 28084008  T
Q  528 caaa 531  Q
    ||||    
T  28084009 caaa 28084012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 679 - 809
Target Start/End: Complemental strand, 47432172 - 47432038
Alignment:
Q  679 agcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgcgaaaacaatttaac 773  Q
    ||||||||  ||||||| | ||| ||||||||||||||||||||| | || |||| || |||||||| ||| ||| ||     | | |||||||||||||    
T  47432172 agcttatggtaattttcacaagcttttttcagcttattttcataaattcttcaatataacttataaa-acaccttatagcatattcaaaaacaatttaac 47432074  T
Q  774 tttgttttatctttttctataaaaatagctaatgta 809  Q
    ||| |||||||||||||||||||||||||| |||||    
T  47432073 tttattttatctttttctataaaaatagcttatgta 47432038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 813 - 867
Target Start/End: Complemental strand, 6556946 - 6556892
Alignment:
Q  813 gcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||    
T  6556946 gcgcttatcatgataagcacttgtgctataaactacaaagaagctgtttatccaa 6556892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 765 - 855
Target Start/End: Original strand, 9572192 - 9572282
Alignment:
Q  765 caatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataag 855  Q
    |||||||||||| ||||||||||| ||||| |||||||||||  || |||||| ||||||||| |||||| | |||||| || ||||||||    
T  9572192 caatttaactttattttatcttttgctatagaaatagctaatacattagcgctgatcatgataggcacttgtgctataagctgcaaataag 9572282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 659 - 745
Target Start/End: Original strand, 51929512 - 51929598
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    ||||||||| |||||||||||||||||| ||||||||   ||| ||||||| ||||||| ||||||| ||||||| ||| |||||||    
T  51929512 ttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaa 51929598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 435 - 532
Target Start/End: Original strand, 47892416 - 47892513
Alignment:
Q  435 agtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaac 532  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| || |||||||| |||||   | ||||||||||| | |  |||||||||||||    
T  47892416 agtgttaaaatcaattctagaatcaaaagcttcaatttctagctttaagtagaatcagttctaggtgaaaaatcaattctactcaaaagcaaccaaac 47892513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 422 - 494
Target Start/End: Original strand, 20026179 - 20026251
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    ||||| ||||||||||||| ||||||||| |||| | |||||||  ||||||||||||||| |||||||||||    
T  20026179 aacaataaatttgagtgttcaaatcaattctagagttaaaagcttgaatttctagcttcaagtagaatcaatt 20026251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 331 - 482
Target Start/End: Complemental strand, 33693172 - 33693031
Alignment:
Q  331 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaacaacaaa 430  Q
    |||||||| |||||||||||| | |||||||| |||  | |||||  || ||||| ||||||||| ||||||||| ||||||| || |           |    
T  33693172 ttgattttaagtgaattgattctataaaattgtttccggttaaaagcgagttgaacgtaaagtgatttatgtttggatacattcatgt----------ca 33693083  T
Q  431 tttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 482  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  33693082 tttgagtgtaaaaatcaattatagaatcaaaagctacaatttctagcttcaa 33693031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 812 - 867
Target Start/End: Original strand, 5894294 - 5894349
Alignment:
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||||||||||||    
T  5894294 agcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaa 5894349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 327 - 422
Target Start/End: Original strand, 11817228 - 11817323
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||  || |||||| |||| ||| || | |||| ||||||| || |||||    
T  11817228 aaaattgagtttgagtgaattgattttgtaaaattgattctaactaaaagcgagttgaagataaaatgatttttatttgaatacattaatgtaaaa 11817323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 605 - 867
Target Start/End: Original strand, 27146174 - 27146434
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 704  Q
    |||||||||||||| ||||||| |||||||||| || ||||||||  |||||  |||| |||||| | | ||||| |||||| || | |||   |||  |    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgt 27146273  T
Q  705 tttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagcta 804  Q
    ||||| |||| |||| ||||| || |||  ||| ||| ||| | ||||  ||| |||||  ||||||| ||| ||||||||||| || || ||||| ||     
T  27146274 tttcaacttactttcgtaagttcttcaagatagtttacaaaaataact--tatacgaaactaatttaaatttattttatcttttgctgtagaaatacctt 27146371  T
Q  805 atgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||  || | |||||||||||||| | |||| | |||||| || |||||||||| |||||||||    
T  27146372 atacataaacgcttatcatgatatgtacttatgctataagctgcaaataagctatttatccaa 27146434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 620 - 803
Target Start/End: Complemental strand, 29904887 - 29904707
Alignment:
Q  620 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttc 719  Q
    ||||||| ||||||| |  || ||||||||  |||||  ||| ||||||| || ||||||||||||| ||||||||   ||| ||||||| |||||||||    
T  29904887 atttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttattttc 29904788  T
Q  720 ataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    |||||| ||  ||| ||| |||||||   |||||  |   | ||||| ||||| ||| ||||||||||| ||||||||||||||    
T  29904787 ataagttctataatatagtttataaaattaacttaca---gcaaacattttaaatttattttatcttttgctataaaaatagct 29904707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 329 - 405
Target Start/End: Complemental strand, 13344913 - 13344837
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 405  Q
    |||||||||| | ||||||||||||||| |||||||| | | ||||| ||| ||||| ||||||||| |||||||||    
T  13344913 aattgattttgattgaattgattttgtagaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 13344837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 601 - 745
Target Start/End: Original strand, 14576569 - 14576712
Alignment:
Q  601 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 700  Q
    ||||||||||||||| || ||||||| ||||||| || |  || |||||    |||  |||||| ||||  ||||||||||||||| ||||||||   ||    
T  14576569 ggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaag 14576668  T
Q  701 catttttcagcttattttcataagtactccaatctagcttataaa 745  Q
    | |||||||||||||||||| |||| ||| ||| |||||||||||    
T  14576669 cttttttcagcttattttca-aagttctctaatatagcttataaa 14576712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 663 - 743
Target Start/End: Complemental strand, 15477658 - 15477578
Alignment:
Q  663 gagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttata 743  Q
    ||||||| |||||||||||||||| ||||||||   ||| ||||||||||||| ||||||||| ||| ||| || ||||||    
T  15477658 gagaacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 661 - 753
Target Start/End: Original strand, 17603359 - 17603451
Alignment:
Q  661 gggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||| | |||||||||||||| ||||||||   | | |||| || |||||||||| |||| ||||||| ||||||||||| |||||||    
T  17603359 gggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaactt 17603451  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 704 - 829
Target Start/End: Complemental strand, 15784381 - 15784257
Alignment:
Q  704 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatcttttt-ctataaaaatagc 802  Q
    |||| |||||||||||| |||| ||||||  |||||||||||  || ||| ||  |||||||||||||||||| ||||| |||||| || || |||||||    
T  15784381 tttttagcttattttcacaagttctccaagatagcttataaaaccagcttata--cgaaaacaatttaactttattttacctttttactttagaaatagc 15784284  T
Q  803 taatgtatgagcgcttatcatgataag 829  Q
    | ||  || |||||||||||| |||||    
T  15784283 ttatacataagcgcttatcataataag 15784257  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 422 - 497
Target Start/End: Original strand, 28287351 - 28287426
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 497  Q
    ||||| ||||||||||||||||||||||| || |||||||||||  || | || ||||||| ||||| ||||||||    
T  28287351 aacaataaatttgagtgttaaaatcaattctaaaatcaaaagctacaaatccttgcttcaagtagaaccaattcta 28287426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 812 - 867
Target Start/End: Original strand, 33541849 - 33541904
Alignment:
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||| ||||| | ||||||||| |||||||| |||||||||||    
T  33541849 agcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaa 33541904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 599 - 686
Target Start/End: Complemental strand, 38001752 - 38001665
Alignment:
Q  599 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 686  Q
    |||||||| ||||||   || ||||||||||||| | ||||| ||||||||  |||||  ||||||||||| ||||||||||||||||    
T  38001752 agggcctgcttggataagcttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatg 38001665  T

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Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 812 - 867
Target Start/End: Original strand, 47498974 - 47499029
Alignment:
Q  812 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||||||||| | |||||| || |||||||| |||||||||||    
T  47498974 agcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 47499029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 816 - 867
Target Start/End: Complemental strand, 51688630 - 51688579
Alignment:
Q  816 cttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||||||||| |||||||| || |||||||| |||||||||||    
T  51688630 cttatcatgataagcacttgtactataagctgcaaataagttgtttatccaa 51688579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 659 - 753
Target Start/End: Complemental strand, 473260 - 473167
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 753  Q
    ||||||||||| ||||||| |||||||  ||||||||   ||| ||||||| ||||||||||||||| |||||||  | |||||||| |||||||    
T  473260 ttgggagaacttatgaaaaaagcttata-caattttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaactt 473167  T

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Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 422 - 512
Target Start/End: Original strand, 7790657 - 7790747
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||| ||||||| |||| |||||||||||||||||| ||| ||  || |  || |||||| ||||||||||||||||| ||| |||||||    
T  7790657 aacaataaatttgtgtgtaaaaatcaattatagaatctaaatctacaaatcataacttcaagtagaatcaattctaaagacaatatcaatt 7790747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Original strand, 22548210 - 22548248
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgatt 365  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22548210 aaaattgattttaagtgaattgattttgtaaaattgatt 22548248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 428 - 566
Target Start/End: Complemental strand, 24587976 - 24587835
Alignment:
Q  428 aaatttgagtgttaaaatcaattat--agaatcaaaagctctaatttct-agcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagc 524  Q
    |||||||||||||||||||||||||  |||||||||||||| ||| ||| | |||||| |||||||| ||||   | |||| ||||||| | |  | |||    
T  24587976 aaatttgagtgttaaaatcaattatagagaatcaaaagctccaatatctaaacttcaagtagaatcagttctggcgtcaaagtcaattctactcaagagc 24587877  T
Q  525 aaccaaacttgttatactcaattctaccgctatagaatcaat 566  Q
    |||||||| ||| | | ||||||||||  || ||||||||||    
T  24587876 aaccaaacatgtcacaatcaattctacacctctagaatcaat 24587835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 605 - 683
Target Start/End: Original strand, 37617384 - 37617462
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctt 683  Q
    |||||||||||||| |||||||||||||||||| |  ||||||||  |||||  ||| ||||| | |||||||||||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 329 - 367
Target Start/End: Complemental strand, 47899425 - 47899387
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattct 367  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  47899425 aattgattttgagtgaattgattttgtaaaattgattct 47899387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 422
Target Start/End: Complemental strand, 7524285 - 7524192
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||||||||  ||||| ||||| | |||||||||||||| |||||| |||  | |||||||||||| || |||||| | |||||||| |||||    
T  7524285 aattgattttgggtgaactgattctataaaattgattctaactaaaagtgagctcaaggtaaagtgatttgtgtttggacacatttatgtaaaa 7524192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 455 - 512
Target Start/End: Complemental strand, 10325133 - 10325076
Alignment:
Q  455 aatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 512  Q
    ||||||| |||| |||||||| |||||||||||| ||||||| |||| ||||||||||    
T  10325133 aatcaaatgctccaatttctaccttcaactagaaacaattctgaaggaaaaatcaatt 10325076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 428 - 497
Target Start/End: Complemental strand, 11049314 - 11049245
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 497  Q
    ||||||| |||| |||||||||| ||||||||||||||  || | |||||||||| ||||||| ||||||    
T  11049314 aaatttgtgtgtaaaaatcaattttagaatcaaaagctacaaatcctagcttcaagtagaatcgattcta 11049245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 814 - 867
Target Start/End: Complemental strand, 15477496 - 15477443
Alignment:
Q  814 cgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 867  Q
    ||||||||||||| |||||||  ||||||| ||||||||||||| |||||||||    
T  15477496 cgcttatcatgattagcacttgcactataagctacaaataagctctttatccaa 15477443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 422
Target Start/End: Original strand, 15514998 - 15515075
Alignment:
Q  345 attgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||||| || ||||| ||| ||| ||| || |||||    
T  15514998 attgattttgtgaaattgagtctagctaaaagtgagttgaaggtaaagcgatttatgattggataaattcatgtaaaa 15515075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 427 - 472
Target Start/End: Complemental strand, 29759677 - 29759632
Alignment:
Q  427 caaatttgagtgttaaaatcaattatagaatcaaaagctctaattt 472  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||    
T  29759677 caaatttgagtgtaaaaatcaattatagaatcagaagctccaattt 29759632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 48549046 - 48549099
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    |||||||||| |||||||| |||||  ||||||||||||||| |||||||||||    
T  48549046 aaaatcaattctagaatcagaagctacaatttctagcttcaagtagaatcaatt 48549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 761 - 809
Target Start/End: Original strand, 30582028 - 30582076
Alignment:
Q  761 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 809  Q
    ||||||| |||||||| ||||||||||||||||||||||| || |||||    
T  30582028 aaaacaagttaactttattttatctttttctataaaaataccttatgta 30582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 600 - 743
Target Start/End: Complemental strand, 33186462 - 33186318
Alignment:
Q  600 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaa-ttttctcg 698  Q
    |||||||||||||||| || |||||||||||||  ||| || ||||||||  |||||   | |||||||| |||||||| | ||||| ||| |||||       
T  33186462 gggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaa 33186363  T
Q  699 agcatttttcagcttattttcataagtactccaatctagcttata 743  Q
    ||| |||||||||||||||  |||||| ||| ||| ||| |||||    
T  33186362 agcttttttcagcttatttatataagttctctaatatagattata 33186318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 38512493 - 38512453
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattct 367  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  38512493 aaaattgattttaagtgaattgattttgtaaaattaattct 38512453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 4347100 - 4347033
Alignment:
Q  343 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 410  Q
    |||||||||||||| |||||||| | | ||||| ||| ||||| ||||||||| ||||||||| ||||    
T  4347100 gaattgattttgtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatac 4347033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 779 - 834
Target Start/End: Complemental strand, 15942305 - 15942250
Alignment:
Q  779 tttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcactt 834  Q
    |||||||||||||||| |||||||| ||  || ||| |||||||||||||||||||    
T  15942305 tttatctttttctatataaatagcttatacataagcacttatcatgataagcactt 15942250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 760 - 827
Target Start/End: Original strand, 23544719 - 23544786
Alignment:
Q  760 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgata 827  Q
    ||||||||||| ||||  ||||||||||||| ||| |||||||| ||  || ||||||||||||||||    
T  23544719 gaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagcgcttatcatgata 23544786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 28464923 - 28465002
Alignment:
Q  344 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    ||||||||||| ||| ||||||||| ||||||  || ||||| ||||  ||| |||||||||| ||||||||| ||||||    
T  28464923 aattgattttgaaaatttgattctatctaaaagcgagttgaatgtaacatgatttatgtttgtgtacatttatgtaaaaa 28465002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 335 - 422
Target Start/End: Complemental strand, 35961534 - 35961447
Alignment:
Q  335 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||| ||| |||||||| |||||||| ||||   ||||||| ||| ||||||||||| ||| |||||||| |||||||| || |||||    
T  35961534 ttttgagtaaattgattctgtaaaatagattacggctaaaagtgagttgaaggtaaaatgatttatgtttctatacattcatgtaaaa 35961447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 49537246 - 49537195
Alignment:
Q  324 tttaaaattgatttttagtgaattgattttgtaaaattgattctagctaaaa 375  Q
    ||||||||||| ||| | ||||||||||||||||| ||| ||||||||||||    
T  49537246 tttaaaattgactttgaatgaattgattttgtaaagttgtttctagctaaaa 49537195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 605 - 684
Target Start/End: Original strand, 50644174 - 50644253
Alignment:
Q  605 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctta 684  Q
    |||||||||||||| ||||||| ||||||| | ||| | ||||||  |||||  ||||||||||| ||||||||| ||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 422 - 464
Target Start/End: Original strand, 213552 - 213594
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagc 464  Q
    |||||||||||||||| | |||||||||| |||||||||||||    
T  213552 aacaacaaatttgagtttaaaaatcaattctagaatcaaaagc 213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 428 - 497
Target Start/End: Complemental strand, 6574245 - 6574175
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattcta 497  Q
    |||||||||| | ||||| |||| || |||||||||||||||||| |||||| ||  ||||||||||||||    
T  6574245 aaatttgagtctgaaaattaattctacaatcaaaagctctaatttttagcttaaagttagaatcaattcta 6574175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 598 - 640
Target Start/End: Complemental strand, 26184901 - 26184859
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgaca 640  Q
    |||| |||||||||||||||| |||||||||| ||||||||||    
T  26184901 taggacctgtttggattgacttatttgagtttttctattgaca 26184859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 440 - 506
Target Start/End: Complemental strand, 29964151 - 29964085
Alignment:
Q  440 taaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaa 506  Q
    |||||| |||| |||||| || | ||||||||| ||||||||| ||||||||||| |||||| ||||    
T  29964151 taaaataaattttagaattaataactctaatttatagcttcaagtagaatcaattataaaggaaaaa 29964085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 428 - 494
Target Start/End: Original strand, 34387714 - 34387780
Alignment:
Q  428 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 494  Q
    ||||||| |||| |||||||||||||||||||||||||  |||| | | |||||| || ||||||||    
T  34387714 aaatttgtgtgtgaaaatcaattatagaatcaaaagctgcaattcccaacttcaagtaaaatcaatt 34387780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 444 - 513
Target Start/End: Complemental strand, 3016210 - 3016142
Alignment:
Q  444 atcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||||||| ||||||||||||||  || |||||  ||||| ||||||||||| |||| |||||||||||||    
T  3016210 atcaattctagaatcaaaagctacaaattctaagttcaagtagaatcaattataaa-gcaaaatcaattc 3016142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 422 - 463
Target Start/End: Complemental strand, 17284166 - 17284125
Alignment:
Q  422 aacaacaaatttgagtgttaaaatcaattatagaatcaaaag 463  Q
    ||||| |||||||||||| |||||||||| ||||||||||||    
T  17284166 aacaataaatttgagtgtaaaaatcaattttagaatcaaaag 17284125  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 423
Target Start/End: Complemental strand, 26382834 - 26382761
Alignment:
Q  350 ttttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 423  Q
    |||| ||||||||||| ||  |||||||||||  || ||||| ||| ||||||||  |||||||||||||||||    
T  26382834 ttttataaaattgattataattaaaaatgaataaaatgtaaactgatttatgtttaaatacatttatataaaaa 26382761  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 441 - 551
Target Start/End: Original strand, 31362239 - 31362345
Alignment:
Q  441 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttata 540  Q
    |||||||||| ||||||||||||||  || ||||| |||||    ||||||||| |  ||||||||||||||| |   |||||||||||||| ||||| |    
T  31362239 aaaatcaattctagaatcaaaagctacaaattctaacttca----gaatcaattatggaggcaaaatcaattctacatgaaagcaaccaaacatgttaga 31362334  T
Q  541 ctcaattctac 551  Q
     || |||||||    
T  31362335 gtcgattctac 31362345  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 329 - 422
Target Start/End: Original strand, 32369944 - 32370037
Alignment:
Q  329 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 422  Q
    |||||||||| |||||||||||| |||| |||||||| |  |||| |||| |||||   |||||||| || |||||| ||||||| || |||||    
T  32369944 aattgattttgagtgaattgattgtgtagaattgattttgactaataatggattgattataaagtgatttgtgtttggatacattcatgtaaaa 32370037  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 732
Target Start/End: Complemental strand, 37473500 - 37473427
Alignment:
Q  659 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaa 732  Q
    |||||||||||  |||||||| |||||| || |||||   ||| |||| |||||||||||||||||| ||||||    
T  37473500 ttgggagaacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaa 37473427  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 38247485 - 38247396
Alignment:
Q  598 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgt 687  Q
    ||||||||||||||||||  | ||||||  ||||||| || || ||||||||    |||  ||||||||||| |||||||||||||||||    
T  38247485 tagggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatgt 38247396  T

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Target: scaffold0361 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 346 - 513
Target Start/End: Original strand, 14044 - 14219
Alignment:
Q  346 ttgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaa---------aacaacaaatttgag 436  Q
    |||||||||||||||||||||| |||| || ||| ||||||||||||||| ||||||||| ||||||| || | ||         || || |||||||||    
T  14044 ttgattttgtaaaattgattcttgctacaattgagttgaaggtaaagtgatttatgtttggatacattcatgtgaaagtgagttgaaaaataaatttgag 14143  T
Q  437 tgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 513  Q
    ||| |||||||||| |||||||| |||||   ||| |||||||||| |||||||||||||   | ||||||||||||    
T  14144 tgtaaaaatcaattctagaatcataagct-agattgctagcttcaagtagaatcaattcttgtgacaaaatcaattc 14219  T

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Target: scaffold0024 (Bit Score: 47; Significance: 3e-17; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 712 - 829
Target Start/End: Original strand, 21311 - 21426
Alignment:
Q  712 ttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatg 811  Q
    |||||||||||| | ||||||| |||||||| || ||| ||| ||  |||||||||||||||||| ||||||||||| |||||||||||||| ||  ||     
T  21311 ttattttcataatttctccaatatagcttatgaaaacagcttata--cgaaaacaatttaactttattttatcttttcctataaaaatagcttatacata 21408  T
Q  812 agcgcttatcatgataag 829  Q
    || |||||||||| ||||    
T  21409 agtgcttatcatggtaag 21426  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 759 - 803
Target Start/End: Complemental strand, 58929 - 58885
Alignment:
Q  759 cgaaaacaatttaactttgttttatctttttctataaaaatagct 803  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||    
T  58929 cgaaaacaatttaactttattttaacttttcctataaaaatagct 58885  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 675 - 742
Target Start/End: Complemental strand, 22312 - 22245
Alignment:
Q  675 aaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttat 742  Q
    |||||||||||| ||||||||   ||| |||||||||||||||||||||||  |||||  ||||||||    
T  22312 aaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttat 22245  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 15240 - 15323
Alignment:
Q  327 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 410  Q
    |||||||||||| |  ||||||||||||| ||||||||| | | ||||| ||| |||||  |||||||| ||||||||| ||||    
T  15240 aaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 15323  T

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