View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16751_low_2 (Length: 925)
Name: NF16751_low_2
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_low_2 |
 | |
|
| [»] scaffold0289 (3 HSPs) |
| | |
|
| [»] scaffold0400 (3 HSPs) |
| | |
|
| [»] scaffold0365 (3 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 731; Significance: 0; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 731; E-Value: 0
Query Start/End: Original strand, 5 - 907
Target Start/End: Original strand, 15664886 - 15665788
Alignment:
| Q |
5 |
gttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttctaggagcaatgttgtttcctccaacctggttgtttc |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
15664886 |
gttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttttaggagcaatgttgtttcctccaacctggttaattc |
15664985 |
T |
|
| Q |
105 |
ttgtggttgacatttggcataaatgggatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataagatcac |
204 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15664986 |
ttgtggttgacatttggcataaatgagatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaaaaggcaaaactatcaataagatcac |
15665085 |
T |
|
| Q |
205 |
tttcttaatctcatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacacttca |
304 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
15665086 |
tttcttaatcttatggttatgagaacccctgcttggatttatgcaagactccaagccagatacattaccgcacaagcctgtattatttctcaaaacttca |
15665185 |
T |
|
| Q |
305 |
attgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatatcaacatttgacaaactaatcatctgatcaaaggaag |
404 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15665186 |
atggtagcgtcattgaatgctcgcatgtttggaagtggaccctcgaattggttatatgatatatcaacatttgacaaactaatcatctgatcaaaggaag |
15665285 |
T |
|
| Q |
405 |
aggggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagagtatcagctttacaaacattggtggtatggttccatccaaaaaattccc |
504 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
15665286 |
aagggatattgccagaaagattgttatgtgaaatattcagtgtttctaagagtatcagctttacaaacgttggtggtatggttccatccaaaaaatttcc |
15665385 |
T |
|
| Q |
505 |
actgagatcaagacttcgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgactcaaatttaagtcgaataacctaggc |
604 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
15665386 |
actgagatcaagactttgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgacacaaatttatgtcgaatatcctaggc |
15665485 |
T |
|
| Q |
605 |
aaaatgacaagttcttttctgatgaagccatttagattattttctgcaacatctatgatttcaagttcttttaacgatgctatttgtgtaggaaaattgc |
704 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
15665486 |
aaaatgacaagttcttttctgatgaagccatttagattattttctgcaacatctaagatttcaagttcttttaatgatgctatttgtgtaggaacattgc |
15665585 |
T |
|
| Q |
705 |
cagaaagatggttgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttgggatttttccagtaagatggtttgaagataagtcaat |
804 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||||||||| |
|
|
| T |
15665586 |
cagaaagatggttgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttggaatttttcctgtgagatgatttgaagataagtcaat |
15665685 |
T |
|
| Q |
805 |
tgaatataagtgtgttgcttcaccgagttcgggaggtataaaacctgatatattatttttggaaatgttaatttgctccaggttattacactttccccaa |
904 |
Q |
| |
|
||||||||||| ||||||| |||||||| |||||| |||||||||||||||| ||||| ||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
15665686 |
tgaatataagttaaccgcttcacttagttcgggtggtatacaacctgatatattattgttggagatgttaatttgcttcaggttatgaaactttccccaa |
15665785 |
T |
|
| Q |
905 |
ttg |
907 |
Q |
| |
|
||| |
|
|
| T |
15665786 |
ttg |
15665788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 8 - 862
Target Start/End: Original strand, 15676723 - 15677577
Alignment:
| Q |
8 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttctaggagcaatgttgtttcctccaacctggttgtttcttg |
107 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||| ||||| |
|
|
| T |
15676723 |
gcttcaattatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttttaggagcaacgatgtttcctccatcctggttgtctcttg |
15676822 |
T |
|
| Q |
108 |
tggttgacatttggcataaatgggatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataagatcacttt |
207 |
Q |
| |
|
|||||||| |||||| ||| |||| ||||||||||||| ||||||| |||||| ||||| ||||||||| ||||||||||||||||||| ||| |
|
|
| T |
15676823 |
tggttgacggttggcaccgatgatatgaaaatttgaaacaaatgaatgctataattagaattcctagtgcaagagataaaactatcaataagatcaattt |
15676922 |
T |
|
| Q |
208 |
cttaatctcatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacacttcaatt |
307 |
Q |
| |
|
||||||| ||| | ||||| | ||||||| || |||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15676923 |
attaatcttatgatagtgagactcactgcttgagattttgcaagggttcaaaccagaaacattaccgcacaagcctatattatttctcaacacttcaatt |
15677022 |
T |
|
| Q |
308 |
gtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagagg |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
15677023 |
gtagcgttattgaatgctcgcatgtttggaagtggaccctccaattggttatatgaaatatcaacaaaggacaaactaatcatctgatcaaaggaagaag |
15677122 |
T |
|
| Q |
408 |
ggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagagtatcagctttacaaacattggtggtatggttccatccaaaaaattcccact |
507 |
Q |
| |
|
|||| ||| ||| | |||||||||||||||| | |||||||||| || |||| ||| ||| |||||||||||||| ||| | ||||| ||| ||||| |
|
|
| T |
15677123 |
ggatcagtccaaaaagaatgttatgtgaaatattcaatgtttctaagcgtttcaggtttccaagcattggtggtatggctcctttcaaaacatttccact |
15677222 |
T |
|
| Q |
508 |
gagatcaagacttcgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaa |
607 |
Q |
| |
|
||||||||||||| |||| ||||||||| |||||| ||| |||||||||||| | |||||||| || |||||| ||| || ||||||||| |||||| |
|
|
| T |
15677223 |
gagatcaagactttcaaggactttaaattgtccaaactcaaaaggaatatttccaatgaatttgttatggctcaaacttaggttgaataacctgggcaaa |
15677322 |
T |
|
| Q |
608 |
atgacaagttcttttctgatgaagccatttagattattttctgcaacatctatgatttcaagttcttttaacgatgctatttgtgtaggaaaattgccag |
707 |
Q |
| |
|
||| |||||| |||| |||||| || |||||||||||||||||||||||| | |||||||| | ||||| ||||| |||||| |||| ||| |||| |
|
|
| T |
15677323 |
atggcaagttgttttgggatgaaaccgcttagattattttctgcaacatctaaggtttcaagtccctttaatgatgcaatttgtaccggaacattaccag |
15677422 |
T |
|
| Q |
708 |
aaagatggttgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttgggatttttccagtaagatggtttgaagataagtcaattga |
807 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| ||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
15677423 |
aaagatggttgttgcttaaatagagtctacccaacatagtcaagttgcctaactcctttggaattttaccaataagatggtttgaagataagtcaattga |
15677522 |
T |
|
| Q |
808 |
atataagtgtgttgcttcaccgagttcgggaggtataaaacctgatatattattt |
862 |
Q |
| |
|
|||||||| |||||||||||| ||||||| |||| | ||||||| ||||||||| |
|
|
| T |
15677523 |
atataagtttgttgcttcaccaagttcggcgggtagataacctgagatattattt |
15677577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 190 - 872
Target Start/End: Original strand, 15670503 - 15671185
Alignment:
| Q |
190 |
tatcaataagatcactttcttaatctcatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggatta |
289 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| | |||||| || ||||||| || | |||| | ||| |||||||||||||||||||||||| |||| |
|
|
| T |
15670503 |
tatcaataagatcaatttcttaatcttatgataatgagacccactgcttgagattttccaagggttcaaaccagaaacattaccgcacaagcctatatta |
15670602 |
T |
|
| Q |
290 |
tttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatatcaacatttgacaaactaatca |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||| |
|
|
| T |
15670603 |
tttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctccaattggttatatgaaatatcaacaaaggacaaactaatca |
15670702 |
T |
|
| Q |
390 |
tctgatcaaaggaagaggggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagagtatcagctttacaaacattggtggtatggttcc |
489 |
Q |
| |
|
|||||||||||||||| ||||| | ||| ||| |||||||||||||||||| | |||||||||| || |||| ||| ||| |||||||||||| | ||| |
|
|
| T |
15670703 |
tctgatcaaaggaagaagggatctgtccaaaaagattgttatgtgaaatattcaatgtttctaagcgtttcaggtttccaagcattggtggtatagctcc |
15670802 |
T |
|
| Q |
490 |
atccaaaaaattcccactgagatcaagacttcgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgactcaaatttaag |
589 |
Q |
| |
|
|| ||||| ||| |||||||||||||||||| |||| ||||||||| |||||| |||| |||||||||||| | ||||| || || |||||| ||| |
|
|
| T |
15670803 |
attcaaaacatttccactgagatcaagactttcaaggactttaaattgtccaaactcatcaggaatatttccaatgaattttttatggctcaaacttaga |
15670902 |
T |
|
| Q |
590 |
tcgaataacctaggcaaaatgacaagttcttttctgatgaagccatttagattattttctgcaacatctatgatttcaagttcttttaacgatgctattt |
689 |
Q |
| |
|
| |||||||| ||||||||| |||||| |||| |||||| ||| ||||||||||| |||||||| ||| | |||||||| | ||||||||||| ||| |
|
|
| T |
15670903 |
ttcaataacctgggcaaaatggcaagttgttttgggatgaaaccacttagattatttgctgcaacaactaaggtttcaagtccctttaacgatgcaattc |
15671002 |
T |
|
| Q |
690 |
gtgtaggaaaattgccagaaagatggttgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttgggatttttccagtaagatggtt |
789 |
Q |
| |
|
|| |||| ||| ||||||||||||||||| |||||| |||||||||||||| ||||||| ||||| | ||||||||| ||||||||||| |||||||| |
|
|
| T |
15671003 |
gtaccggaacattaccagaaagatggttgtttcttaaatagagtctacccaacatagtcaagttgcctatctcctttggaatttttccagttagatggtt |
15671102 |
T |
|
| Q |
790 |
tgaagataagtcaattgaatataagtgtgttgcttcaccgagttcgggaggtataaaacctgatatattatttttggaaatgt |
872 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||| |||| |||| |
|
|
| T |
15671103 |
tgatgataagtcaattgaatataagtttgttgcttcaccgagttcgggaggtagataacctgatatattatttctggagatgt |
15671185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 257 - 653
Target Start/End: Complemental strand, 14606120 - 14605724
Alignment:
| Q |
257 |
aagccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgat |
356 |
Q |
| |
|
|||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||| |||| ||||| || || || ||||||||||| ||||| | |
|
|
| T |
14606120 |
aagccagagacattaccacacaagcctttattatttctcaccacttcaattgtagcgttgctgaaagctcgaatattggggagtggaccctccaattggt |
14606021 |
T |
|
| Q |
357 |
tatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagag |
456 |
Q |
| |
|
||||||||||||||||| || || || | ||||||||| ||| |||||| ||| ||||||| ||| |||||||| ||||| | |||||| ||| |
|
|
| T |
14606020 |
tatatgatatatcaacagatgttaagctgaacatctgatcgaagctagagggaataaaaccagaaagattattatgtgagatattcaatgtttccaagta |
14605921 |
T |
|
| Q |
457 |
tatcagctttacaaacattggtggtatggttccatccaaaaaattcccactgagatcaagacttcgaagggctttaaattttccaaattcattaggaata |
556 |
Q |
| |
|
| ||| || | || ||||| |||||| ||||||||||||||||| ||||||||||| || || |||| | ||||||| |||||||||| |||||||| |
|
|
| T |
14605920 |
tttcaactgtgtaagcattgatggtattgttccatccaaaaaatttccactgagatctaggatttcaaggacattaaattgtccaaattcaataggaata |
14605821 |
T |
|
| Q |
557 |
tttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaaatgacaagttcttttctgatgaagccatttagattattttctgcaa |
653 |
Q |
| |
|
|||||| | |||||||| || ||||||||||||| ||| | |||||||| | |||||| |||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
14605820 |
tttcctgtgaatttgttatggctcaaatttaagttccataccttaggcaaatttgcaagttgttttgtgatgaagccacttagatcattttctgcaa |
14605724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 257 - 653
Target Start/End: Complemental strand, 16025297 - 16024901
Alignment:
| Q |
257 |
aagccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgat |
356 |
Q |
| |
|
|||||||| |||||||| ||||||||| ||||||||||| |||||||||||||||||| |||| ||||| || || || ||||||||||| ||||| | |
|
|
| T |
16025297 |
aagccagagacattaccacacaagcctttattatttctcaccacttcaattgtagcgttgctgaaagctcgaatattggggagtggaccctccaattggt |
16025198 |
T |
|
| Q |
357 |
tatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagag |
456 |
Q |
| |
|
||||||||||||||||| | || || | ||||||||| ||| |||||| ||| ||||||| ||| |||||||| ||||| | |||||| ||| |
|
|
| T |
16025197 |
tatatgatatatcaacagacgttaagctgaacatctgatcgaagctagagggaataaaaccagaaagattattatgtgagatattcaatgtttccaagta |
16025098 |
T |
|
| Q |
457 |
tatcagctttacaaacattggtggtatggttccatccaaaaaattcccactgagatcaagacttcgaagggctttaaattttccaaattcattaggaata |
556 |
Q |
| |
|
| ||| || | || ||||| |||||| ||||||||||||||||| ||||||||||| || || |||| | ||||||| |||||||||| |||||||| |
|
|
| T |
16025097 |
tttcaactgtgtaagcattgatggtattgttccatccaaaaaatttccactgagatctaggatttcaaggacattaaattgtccaaattcaataggaata |
16024998 |
T |
|
| Q |
557 |
tttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaaatgacaagttcttttctgatgaagccatttagattattttctgcaa |
653 |
Q |
| |
|
|||||| | |||||||| || ||||||||||||| ||| | |||||||| | |||||| |||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
16024997 |
tttcctgtgaatttgttatggctcaaatttaagttccataccttaggcaaatttgcaagttgttttgtgatgaagccacttagatcattttctgcaa |
16024901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 17 - 653
Target Start/End: Complemental strand, 16173013 - 16172383
Alignment:
| Q |
17 |
atgttctcatacaccattttcccatcaaaactccatattgtaaatacatttctaggagcaatgttgtttcctccaacctggttgtttcttgtggttgaca |
116 |
Q |
| |
|
|||||||| || |||||||| ||||| ||| ||||||||||||| |||||| ||| |||| |||| ||||| |||||||| | || | ||||||| |
|
|
| T |
16173013 |
atgttctcgtagaccatttttccatcgaaattccatattgtaaaaacattttgaggtacaataatgttccctcctacctggttttctcctatggttgatg |
16172914 |
T |
|
| Q |
117 |
tttggcataaatgggatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataagatcactttcttaatctc |
216 |
Q |
| |
|
| ||| | | ||| || |||||||||||||| ||||||||||||||||||| || ||||||| ||||||||||||| | |||| ||||||| |
|
|
| T |
16172913 |
tatggtagagatgatataagaatttgaaacaagt---tgctagcattagagttcctagtacaagaggtaaaactatcaatagta---cttttttaatctt |
16172820 |
T |
|
| Q |
217 |
atggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgtta |
316 |
Q |
| |
|
| | | | | || || || ||| ||| ||||| |||||||||||| | |||||| |||||||| ||||||||||||||||||||| |||||| || |
|
|
| T |
16172819 |
acgatcaggcgatttacttctcggtgttaagcaaggctccaagccagagatattaccacacaagccattattatttctcaacacttcaatggtagcgcta |
16172720 |
T |
|
| Q |
317 |
ttgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgc |
416 |
Q |
| |
|
|||| ||||| ||||| || |||||||| || ||||| |||||||||||||||||| | ||||| | ||||||||| ||| |||||| ||| | |
|
|
| T |
16172719 |
ctgaaagctcggatgttggggagtggaccttccaattggttatatgatatatcaacagacgttaaactgaacatctgatcgaagctagagggaataaatc |
16172620 |
T |
|
| Q |
417 |
cagaaaaattgttatgtgaaatattgagtgtttctaagagtatcagctttacaaacattggtggtatggttccatccaaaaaattcccactgagatcaag |
516 |
Q |
| |
|
|||||| ||| |||||||| ||||| | |||||| ||| | ||| || | || ||||| |||||| ||||||| |||||||| ||||| |||||||| |
|
|
| T |
16172619 |
cagaaagattattatgtgagatattcaatgtttccaagtatttcaactgtgtaagcattgatggtattgttccatttaaaaaatttccactcagatcaag |
16172520 |
T |
|
| Q |
517 |
acttcgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaaatgacaagt |
616 |
Q |
| |
|
||| ||||| |||||||| ||| |||||| ||||||||||||| | |||||||| || ||||||||||||| ||| | |||||||| | ||||| |
|
|
| T |
16172519 |
gctttgaaggattttaaattgtcccaattcaacaggaatatttcctatcaatttgttatggctcaaatttaagttccataccttaggcaaatttgcaagt |
16172420 |
T |
|
| Q |
617 |
tcttttctgatgaagccatttagattattttctgcaa |
653 |
Q |
| |
|
| |||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
16172419 |
tgttttgtgatgaagccacttagatcattttctgcaa |
16172383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 257 - 653
Target Start/End: Complemental strand, 16103102 - 16102705
Alignment:
| Q |
257 |
aagccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgat |
356 |
Q |
| |
|
|||||||| |||||||| |||||| || |||||||||||||||||| ||||||||||| |||| ||||| ||||| || ||||||||||| ||||| | |
|
|
| T |
16103102 |
aagccagagacattaccacacaagtctttattatttctcaacacttcgattgtagcgtttctgaaagctcgaatgttggggagtggaccctccaattggt |
16103003 |
T |
|
| Q |
357 |
tatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagag |
456 |
Q |
| |
|
||||||||||||||||| || ||| || | ||| ||||||||| |||||| ||| |||||||| ||| |||||||| ||||| | |||||| ||| |
|
|
| T |
16103002 |
tatatgatatatcaacagatgtcaagcttaacatttgatcaaagctagagggaataaagccagaaagattattatgtgagatattcaatgtttccaagta |
16102903 |
T |
|
| Q |
457 |
tatcagctttacaaacattggtggtatggttcca-tccaaaaaattcccactgagatcaagacttcgaagggctttaaattttccaaattcattaggaat |
555 |
Q |
| |
|
| ||| || | || ||||| |||||| |||||| | |||||||| ||||| |||||||| ||| ||||| |||||||| ||| |||||| |||||| |
|
|
| T |
16102902 |
tttcaactgtgtaagcattgatggtattgttccatttaaaaaaatttccactcagatcaaggctttgaaggattttaaattgtcccaattcaacaggaat |
16102803 |
T |
|
| Q |
556 |
atttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaaatgacaagttcttttctgatgaagccatttagattattttctgcaa |
653 |
Q |
| |
|
||||||| | |||||||| || ||||||||||||| ||| | |||||||| | |||||| |||| ||||||||||| |||||| ||||||||||| |
|
|
| T |
16102802 |
atttcctatcaatttgttatggctcaaatttaagttccataccttaggcaaatttgcaagttgttttgtgatgaagccacttagatcattttctgcaa |
16102705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 247 - 801
Target Start/End: Complemental strand, 17848763 - 17848209
Alignment:
| Q |
247 |
gcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccc |
346 |
Q |
| |
|
||||| |||||| |||||||||||||| |||| | || |||||||||||| |||||||| || || |||||||| ||| | |||||||||| |||||| |
|
|
| T |
17848763 |
gcaaggctccaatccagaaacattaccacacagtcttgtattatttctcaaaacttcaatggttgctttattgaaagctggaatgtttggaaccggaccc |
17848664 |
T |
|
| Q |
347 |
tcgaattgattatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgccagaaaaattgttatgtgaaatattgagtg |
446 |
Q |
| |
|
|| ||||| ||| | ||||| ||||| | ||||||| | ||| ||||||||| ||||| ||| ||||||| || |||||||| ||||| | || |
|
|
| T |
17848663 |
tctaattggttaaacgatatgtcaaccgataacaaactcagcatatgatcaaagttcgagggaataaatccagaaaggttattatgtgatatattcaatg |
17848564 |
T |
|
| Q |
447 |
tttctaagagtatcagctttacaaacattggtggtatggttccatccaaaaaattcccactgagatcaagacttcgaagggctttaaattttccaaattc |
546 |
Q |
| |
|
||||||| |||||| | ||| | ||| ||||| ||||| | | |||||||||||| |||||||||||| ||||| ||||||||| ||||| || |
|
|
| T |
17848563 |
attctaagtatatcagttgagcaagcgttgacggtattgttccgttgagaaaattcccactaagatcaagactttgaaggactttaaattggccaaactc |
17848464 |
T |
|
| Q |
547 |
attaggaatatttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaaatgacaagttcttttctgatgaagccatttagattattt |
646 |
Q |
| |
|
| ||||||||||||| |||||||||| || |||||||| | || ||||| ||||| ||| | |||||| || ||||||||||| |||||| |||| |
|
|
| T |
17848463 |
aacaggaatatttcctttaaatttgttatggctcaaattcatgttcaataatctaggaaaatatcctagttctcttgtgatgaagccacttagataattt |
17848364 |
T |
|
| Q |
647 |
tctgcaacatctatgatttcaagttcttttaacgatgctatttgtgtaggaaaattgccagaaagatggttgttgcttaaaaagagtctacccaacttag |
746 |
Q |
| |
|
| |||| || || | | ||||||| |||| |||| ||||||| ||||| || || |||||| |||||||| || |||||| || ||| || |
|
|
| T |
17848363 |
acggcaagatttaaggtctcaagtttctttagtgatgttatttgtacaggaacgtttcctgaaagacggttgttgtgtatcaagagtttagacaatgaag |
17848264 |
T |
|
| Q |
747 |
tcaaattgcccaactcctttgggatttttccagtaagatggtttgaagataagtc |
801 |
Q |
| |
|
|||| || || ||||||||||| |||||||| || |||| |||||||||||||| |
|
|
| T |
17848263 |
tcaagttacctaactcctttggaatttttcctgtgagataatttgaagataagtc |
17848209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17849000 - 17848934
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
17849000 |
ttctgtggcttcaataatactctcatacaccatttttccatcaaaactccatatggtaaatagattt |
17848934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 17825739 - 17825804
Alignment:
| Q |
2 |
tctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
||||| |||| |||||| ||||||||||||||||| |||||||||||||||| ||||||| |||| |
|
|
| T |
17825739 |
tctgtggcttgaataatattctcatacaccattttgtcatcaaaactccatatggtaaatagattt |
17825804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 400
Target Start/End: Original strand, 17826012 - 17826126
Alignment:
| Q |
286 |
attatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatatcaacatttgacaaacta |
385 |
Q |
| |
|
|||||||||||| ||||||| ||||| |||| ||| ||| | |||||||||| || |||||| || || ||| ||||||| |||||| || |||| || |
|
|
| T |
17826012 |
attatttctcaaaacttcaaaagtagctttatggaaagctggaatgtttggaactgaaccctcaaactggttaaatgatatgtcaacagttaacaagctg |
17826111 |
T |
|
| Q |
386 |
atcatctgatcaaag |
400 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
17826112 |
agcatctgatcaaag |
17826126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16103361 - 16103295
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||| ||||| | |||||| ||| |||| ||||| |||||||| |||||||||||||||||||| |
|
|
| T |
16103361 |
ttctgtggcttccacaatgttttcaaacacaatttttccatcaaagttccatattgtaaatacattt |
16103295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 17825868 - 17825934
Alignment:
| Q |
134 |
gagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataaga |
200 |
Q |
| |
|
|||||| |||||||||| ||| |||| ||||||||||| |||||| |||||||| |||||||||| |
|
|
| T |
17825868 |
gagaatatgaaacaaactaatactagtattagagttccaattgcaagtggcaaaacaatcaataaga |
17825934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 710 - 867
Target Start/End: Original strand, 17826424 - 17826581
Alignment:
| Q |
710 |
agatggttgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttgggatttttccagtaagatggtttgaagataagtcaattgaat |
809 |
Q |
| |
|
|||||||||||||||| |||||| || ||| |||||| || || ||||||||||| |||||||| || || | |||||||||||||| | ||||| |
|
|
| T |
17826424 |
agatggttgttgcttatcaagagtttagacaatgaagtcaagtttcctaactcctttggaatttttcctgtgaggtaatttgaagataagtcgagtgaat |
17826523 |
T |
|
| Q |
810 |
ataagtgtgttgcttcaccgagttcgggaggtataaaacctgatatattatttttgga |
867 |
Q |
| |
|
|||| | |||| || || ||||| || |||||| ||||||||| ||||| ||||| |
|
|
| T |
17826524 |
ataaattggttgtctcgcctagttctggtggtataccacctgatatgttattattgga |
17826581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 17848869 - 17848804
Alignment:
| Q |
135 |
agaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataaga |
200 |
Q |
| |
|
|||||||||||||||| ||| |||| ||||||||||| |||||| || ||||| |||||||||| |
|
|
| T |
17848869 |
agaatttgaaacaaactaatactagtattagagttccaattgcaagtggtaaaacaatcaataaga |
17848804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289 (Bit Score: 714; Significance: 0; HSPs: 3)
Name: scaffold0289
Description:
Target: scaffold0289; HSP #1
Raw Score: 714; E-Value: 0
Query Start/End: Original strand, 17 - 906
Target Start/End: Original strand, 17766 - 18655
Alignment:
| Q |
17 |
atgttctcatacaccattttcccatcaaaactccatattgtaaatacatttctaggagcaatgttgtttcctccaacctggttgtttcttgtggttgaca |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
17766 |
atgttctcatacaccattttcccatcaaaactccatattgtaaatacatttttaggagcaatgttgtttcctccaacctggttaattcttgtggttgaca |
17865 |
T |
|
| Q |
117 |
tttggcataaatgggatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataagatcactttcttaatctc |
216 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
17866 |
tttggcataaatgagatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaaaaggcaaaactatcaataagatcactttcttaatctt |
17965 |
T |
|
| Q |
217 |
atggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgtta |
316 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||||||| | |
|
|
| T |
17966 |
atggttatgagaacccctgcttggatttatgcaagactccaagccagatacattaccgcacaagcctgtattatttctcaaaacttcaatggtagcgtca |
18065 |
T |
|
| Q |
317 |
ttgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgc |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
18066 |
ttgaatgctcgcatgtttggaagtggaccctcgaattggttatatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaagggatattgc |
18165 |
T |
|
| Q |
417 |
cagaaaaattgttatgtgaaatattgagtgtttctaagagtatcagctttacaaacattggtggtatggttccatccaaaaaattcccactgagatcaag |
516 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18166 |
cagaaagattgttatgtgaaatattcagtgtttctaagagtatcagctttacaaacgttggtggtatggttccatccaaaaaatttccactgagatcaag |
18265 |
T |
|
| Q |
517 |
acttcgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgactcaaatttaagtcgaataacctaggcaaaatgacaagt |
616 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
18266 |
actttgaagggctttaaattttccaaattcattaggaatatttcctctaaatttgttttgacacaaatttatgtcgaatatcctaggcaaaatgacaagt |
18365 |
T |
|
| Q |
617 |
tcttttctgatgaagccatttagattattttctgcaacatctatgatttcaagttcttttaacgatgctatttgtgtaggaaaattgccagaaagatggt |
716 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18366 |
tcttttctgatgaagccatttagattattttctgcaacatctaagatttcaagttcttttaatgatgctatttgtgtaggaacattgccagaaagatggt |
18465 |
T |
|
| Q |
717 |
tgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttgggatttttccagtaagatggtttgaagataagtcaattgaatataagtg |
816 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||| |
|
|
| T |
18466 |
tgttgcttaaaaagagtctacccaacttagtcaaattgcccaactcctttggaatttttcctgtgagatgatttgaagataagtcaattgaatataagtt |
18565 |
T |
|
| Q |
817 |
tgttgcttcaccgagttcgggaggtataaaacctgatatattatttttggaaatgttaatttgctccaggttattacactttccccaatt |
906 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||||||||| ||||| ||||||||||||| |||||||| | ||||||||||||| |
|
|
| T |
18566 |
aaccacttcacttagttcgggtggtatacaacctgatatattattgttggagatgttaatttgcttcaggttatgaaactttccccaatt |
18655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 5208 - 5521
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttctaggagcaatgttgtttcctccaacctggttg |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
5208 |
ttctgtggcttcaataatgttctcatacaccattttcccatcaaaactccatatagtaaatacatttttaggagcaatgatgtttcctccaacctggttg |
5307 |
T |
|
| Q |
101 |
tttcttgtggttgacatttggcataaatgggatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataaga |
200 |
Q |
| |
|
||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5308 |
tttcttgtgttcgacatttggcatagatgacatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggaaaaactatcaataaga |
5407 |
T |
|
| Q |
201 |
tcactttcttaatctcatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacac |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
5408 |
tcactttcttaatcttatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccacacaagcctgtattatttctcaacac |
5507 |
T |
|
| Q |
301 |
ttcaattgtagcgt |
314 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
5508 |
ttcaatggtagcgt |
5521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0289; HSP #3
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 14041 - 14354
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacatttctaggagcaatgttgtttcctccaacctggttg |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
14041 |
ttctgtggcttcaataatgttctcatacaccattttcccatcaaaactccatatagtaaatacatttttaggagcaatgatgtttcctccaacctggttg |
14140 |
T |
|
| Q |
101 |
tttcttgtggttgacatttggcataaatgggatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggcaaaactatcaataaga |
200 |
Q |
| |
|
||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14141 |
tttcttgtgttcgacatttggcatagatgacatgagaatttgaaacaaacaaatgctagcattagagttcctggtgcaagaggaaaaactatcaataaga |
14240 |
T |
|
| Q |
201 |
tcactttcttaatctcatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccgcacaagcctggattatttctcaacac |
300 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |
|
|
| T |
14241 |
tcactttcttaatcttatggttatgagaacccctgcttggttttatgcaagactccaagccagaaacattaccacacaagcctgtattatttctcaacac |
14340 |
T |
|
| Q |
301 |
ttcaattgtagcgt |
314 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
14341 |
ttcaatggtagcgt |
14354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 6956 - 6894
Alignment:
| Q |
5 |
gttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||| |||||||| |||||||||| ||||| |||| |
|
|
| T |
6956 |
gttgcttcaacaatgttctcatacaccaattttccatcaaagctccatattgcaaatagattt |
6894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 795
Target Start/End: Complemental strand, 12498 - 12463
Alignment:
| Q |
760 |
ctcctttgggatttttccagtaagatggtttgaaga |
795 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
12498 |
ctcctttggaatttttccagtaagatggtttgaaga |
12463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 6701 - 6599
Alignment:
| Q |
269 |
ttaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatat |
368 |
Q |
| |
|
||||| ||||||||| |||||||| || ||||||||| ||| || ||||| ||| | |||||||||| |||||| || ||||| || |||||||||| |
|
|
| T |
6701 |
ttaccacacaagcctttgttatttcttaatgcttcaattggagcatttttgaaggctggaatgtttggaattggaccttcaaattggttgtatgatatat |
6602 |
T |
|
| Q |
369 |
caa |
371 |
Q |
| |
|
||| |
|
|
| T |
6601 |
caa |
6599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 7600 - 7538
Alignment:
| Q |
5 |
gttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||| |||||||| |||||||||| ||||| |||| |
|
|
| T |
7600 |
gttgcttcaacaatgttctcatacaccaattttccatcaaagctccatattgcaaatagattt |
7538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 795
Target Start/End: Complemental strand, 13141 - 13106
Alignment:
| Q |
760 |
ctcctttgggatttttccagtaagatggtttgaaga |
795 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13141 |
ctcctttggaatttttccagtaagatggtttgaaga |
13106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 269 - 371
Target Start/End: Complemental strand, 7345 - 7243
Alignment:
| Q |
269 |
ttaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgattatatgatatat |
368 |
Q |
| |
|
||||| ||||||||| |||||||| || ||||||||| ||| || ||||| ||| | |||||||||| |||||| || ||||| || |||||||||| |
|
|
| T |
7345 |
ttaccacacaagcctttgttatttcttaatgcttcaattggagcatttttgaaggctggaatgtttggaattggaccttcaaattggttgtatgatatat |
7246 |
T |
|
| Q |
369 |
caa |
371 |
Q |
| |
|
||| |
|
|
| T |
7245 |
caa |
7243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14468275 - 14468209
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||| ||||||| |||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
14468275 |
ttctgtggcttcaacaatgttttcatacacaatttttccatcaaaactccatattgaaaatagattt |
14468209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14522264 - 14522330
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||| ||||| || || ||||||||||||||||| |||||||| |||||||||||||||| |||| |
|
|
| T |
14522264 |
ttctgtggcttcgatgatattctcatacaccatttttccatcaaagctccatattgtaaatagattt |
14522330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 14483216 - 14483157
Alignment:
| Q |
8 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
||||| ||||||||||| ||||||||||| | ||||||||||||||||| ||||| |||| |
|
|
| T |
14483216 |
gcttcgataatgttctcgtacaccatttttcaatcaaaactccatattgaaaatagattt |
14483157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 15037484 - 15037437
Alignment:
| Q |
8 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatatt |
55 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
15037484 |
gcttcgataatgttctcatacaccattttgccatcaaagctccatatt |
15037437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14504454 - 14504388
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||| ||||| | ||| || |||||||||||||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
14504454 |
ttctgtggcttctacaatattttcatacaccatttttccatcaaaactccatattgaaaatagattt |
14504388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14532385 - 14532451
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaatacattt |
67 |
Q |
| |
|
|||||| ||||| |||||| |||| ||||||||||| |||||||| |||||||||| ||||| |||| |
|
|
| T |
14532385 |
ttctgtggcttcgataatggtctcgtacaccatttttccatcaaagctccatattgcaaatagattt |
14532451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15011472 - 15011418
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatatt |
55 |
Q |
| |
|
|||||| ||||| || |||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
15011472 |
ttctgtggcttcgattatgttctcatacaccattttgccatcaaagctccatatt |
15011418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 259 - 517
Target Start/End: Complemental strand, 15032678 - 15032420
Alignment:
| Q |
259 |
gccagaaacattaccgcacaagcctggattatttctcaacacttcaattgtagcgttattgaatgctcgcatgtttggaagtggaccctcgaattgatta |
358 |
Q |
| |
|
|||||| |||||||| || |||||| |||||| |||| ||||||||| ||| || ||||| ||| |||||||||| ||||||||| || || || |
|
|
| T |
15032678 |
gccagagacattaccacataagcctttgttatttgtcaatgcttcaattggagcttttttgaaagctgtaatgtttggaattggaccctccaactggttg |
15032579 |
T |
|
| Q |
359 |
tatgatatatcaacatttgacaaactaatcatctgatcaaaggaagaggggatattgccagaaaaattgttatgtgaaatattgagtgtttctaagagta |
458 |
Q |
| |
|
|| |||||||||||| ||| ||| || | ||| | | ||||| ||||| || | ||||| | |||||||||||| | ||| | |||||||||| | |
|
|
| T |
15032578 |
taagatatatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagcgat |
15032479 |
T |
|
| Q |
459 |
tcagctttacaaacattggtggtatggttccatccaaaaaattcccactgagatcaaga |
517 |
Q |
| |
|
| | || ||| ||||| |||||||||||||| || |||||||||||| ||||||||| |
|
|
| T |
15032478 |
ttaactgcccaagcattgatggtatggttccattcataaaattcccactaagatcaaga |
15032420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 15017580 - 15017533
Alignment:
| Q |
8 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatatt |
55 |
Q |
| |
|
||||| || |||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
15017580 |
gcttcgattatgttctcatacaccattttgccatcaaagctccatatt |
15017533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15002579 - 15002525
Alignment:
| Q |
1 |
ttctgttgcttcaataatgttctcatacaccattttcccatcaaaactccatatt |
55 |
Q |
| |
|
|||||| ||||| || |||||||| ||||||||||| |||||||| ||||||||| |
|
|
| T |
15002579 |
ttctgtggcttcgattatgttctcgtacaccatttttccatcaaagctccatatt |
15002525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 517
Target Start/End: Original strand, 14522729 - 14522774
Alignment:
| Q |
472 |
cattggtggtatggttccatccaaaaaattcccactgagatcaaga |
517 |
Q |
| |
|
||||| |||||||||||||| |||||||||||| || ||||||||| |
|
|
| T |
14522729 |
cattgttggtatggttccattcaaaaaattcccgctaagatcaaga |
14522774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 517
Target Start/End: Complemental strand, 15025124 - 15025079
Alignment:
| Q |
472 |
cattggtggtatggttccatccaaaaaattcccactgagatcaaga |
517 |
Q |
| |
|
||||| |||||||||||||| || |||||||||||| ||||||||| |
|
|
| T |
15025124 |
cattgatggtatggttccattcataaaattcccactaagatcaaga |
15025079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 517
Target Start/End: Complemental strand, 15040766 - 15040721
Alignment:
| Q |
472 |
cattggtggtatggttccatccaaaaaattcccactgagatcaaga |
517 |
Q |
| |
|
||||| |||||||||||||| |||| |||||||||| ||||||||| |
|
|
| T |
15040766 |
cattgttggtatggttccattcaaagaattcccactaagatcaaga |
15040721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 17027354 - 17027300
Alignment:
| Q |
8 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaata |
62 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| ||||||| || ||||| |
|
|
| T |
17027354 |
gcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaata |
17027300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 17557846 - 17557792
Alignment:
| Q |
8 |
gcttcaataatgttctcatacaccattttcccatcaaaactccatattgtaaata |
62 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||| ||||||| || ||||| |
|
|
| T |
17557846 |
gcttcgataatgttctcatacaccatttttccatcaaagctccatactgcaaata |
17557792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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