View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16751_low_31 (Length: 408)

Name: NF16751_low_31
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16751_low_31
NF16751_low_31
[»] chr2 (23 HSPs)
chr2 (1-391)||(9321832-9322212)
chr2 (1-198)||(9329440-9329642)
chr2 (1-136)||(9060271-9060406)
chr2 (10-89)||(10348653-10348732)
chr2 (1-89)||(12018134-12018222)
chr2 (1-136)||(8572675-8572809)
chr2 (10-89)||(10336661-10336740)
chr2 (10-82)||(10372732-10372804)
chr2 (10-89)||(10353995-10354074)
chr2 (1-134)||(9316866-9316999)
chr2 (10-89)||(9292778-9292857)
chr2 (1-89)||(12011813-12011901)
chr2 (27-86)||(8578748-8578807)
chr2 (1-78)||(9357957-9358034)
chr2 (1-89)||(7612737-7612825)
chr2 (1-89)||(12005385-12005473)
chr2 (10-89)||(7114865-7114944)
chr2 (10-89)||(9283394-9283473)
chr2 (10-59)||(9365445-9365494)
chr2 (1-56)||(14551160-14551215)
chr2 (1-89)||(11986745-11986833)
chr2 (22-89)||(9275385-9275452)
chr2 (23-89)||(17565334-17565400)
[»] scaffold0667 (1 HSPs)
scaffold0667 (1-89)||(5300-5388)
[»] chr3 (2 HSPs)
chr3 (1-89)||(37463363-37463451)
chr3 (15-89)||(39428733-39428807)
[»] chr4 (1 HSPs)
chr4 (10-89)||(26575729-26575808)
[»] chr5 (1 HSPs)
chr5 (1-89)||(36225591-36225679)
[»] chr8 (1 HSPs)
chr8 (1-89)||(41965942-41966030)
[»] chr1 (1 HSPs)
chr1 (286-370)||(11634231-11634316)


Alignment Details
Target: chr2 (Bit Score: 340; Significance: 0; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 391
Target Start/End: Original strand, 9321832 - 9322212
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttcctccaacaatt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9321832 aagtggtgagaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttcctccaacaatt 9321931  T
Q  101 ccggcggaggaacatcactcgccattggaaggaaggttcgttctagggttgtgtggtgcttctgcgttttggttgatttaggttttagtatttgttgatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||          |||||||||||||||||||||    
T  9321932 ccggcggaggaacatcactcgccattggaaggaaggttcgttctagggttgtgtggttcttctgcgttt----------aggttttagtatttgttgatt 9322021  T
Q  201 gattgtcaccatccactaatcattctgctaccgctaccaagaaatagagtgagcgttgtttccttcatcaaatgtgtaagttgtgtgtgttaaacatcat 300  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9322022 gattgtcaccatccactaatcattctgctactgctaccaagaaatagagtgagcgttgtttccttcatcaaatgtgtaagttgtgtgtgttaaacatcat 9322121  T
Q  301 gcttaaggaagttgatgtgaagtctttactattatgcgttggttatttttattttagtaactgctcttcactttttattactccattactt 391  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9322122 gcttaaggaagttgatgtcaagtctttactattatgcgttggttatttttattttagtaactgctcttcactttttattactccattactt 9322212  T

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Target: chr2; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 9329440 - 9329642
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttcctccaacaatt 100  Q
    |||| ||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||   |||||||    
T  9329440 aagttgtgggaatcgattatggatttaagtgattttgaagttgaacggaatcggagaagtgattttaccggtaagcgggagaggatttccgttaacaatt 9329539  T
Q  101 ccggcggaggaacatcactcgccatt----ggaaggaaggttcgttctagggttgtgtggtgcttctgcgttttggttgattta-ggttttagtatttgt 195  Q
    ||||| || ||||||||| |||||||    ||||||||||||||||||||||||||||||  || || |||||||||||||||| ||||||||| |||||    
T  9329540 ccggcagaagaacatcacccgccattggaaggaaggaaggttcgttctagggttgtgtggaactgctacgttttggttgatttagggttttagtttttgt 9329639  T
Q  196 tga 198  Q
    |||    
T  9329640 tga 9329642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 9060406 - 9060271
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttcctccaacaatt 100  Q
    |||| ||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||  |||||||||||||||| ||||||  | |  | ||    
T  9060406 aagttgtgagaatcgattaaggatttaagtgattttgaagttgatcggaatcggagaagtgattgaaccggtaagcgggagaagatttcggcaagtattt 9060307  T
Q  101 ccggcggaggaacatcactcgccattggaaggaagg 136  Q
    |||||||| ||||||||  |||||||||||||||||    
T  9060306 ccggcggaagaacatcagccgccattggaaggaagg 9060271  T

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Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 10348653 - 10348732
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  10348653 gaatcgattaaggatttaagtgattttgaggttgatcggaatcggagaagtgattttaccggtaagcgggagaagatttc 10348732  T

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Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12018222 - 12018134
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| |||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||| ||||||||||||| ||||||    
T  12018222 aagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcgaagaagtgattttactggtaagcgggagaagatttc 12018134  T

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Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 8572809 - 8572675
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttcctccaacaatt 100  Q
    |||| ||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||| |||| |||||||| ||||||    |  | ||    
T  8572809 aagttgtgggaatcgattatagatttaagtgattttgaagttgatcggaatcggagaagtga-tttactggtatgcgggagaagatttcagtgactattt 8572711  T
Q  101 ccggcggaggaacatcactcgccattggaaggaagg 136  Q
    ||| |||| ||||||||| |||||||||||||||||    
T  8572710 ccgacggaagaacatcacccgccattggaaggaagg 8572675  T

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Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 10336661 - 10336740
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||| ||||||| ||||||    
T  10336661 gaatcgattaaggatttaagtgattttgaggttgatcggaatcggagaagtgattttaccggtaaacgggagaagatttc 10336740  T

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Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 10372732 - 10372804
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggaga 82  Q
    ||||||||||  ||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  10372732 gaatcgattaatgatttaaatgattttgaagttgatcggaatcggagaagtgattttaccggtaagcgggaga 10372804  T

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Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 10353995 - 10354074
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||| |||||||| |||||| |||||||||||||||  |||||||||| |||||||||||||||| ||||||||    
T  10353995 gaatcgattagggatttaaatgattttgaagttgatcggaatctgagaagtgatattaccggtaagcgggaaaggatttc 10354074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9316866 - 9316999
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttcctccaacaatt 100  Q
    |||| ||| ||||| ||||  |||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||| ||||||  | |  | ||    
T  9316866 aagttgtgagaatctattaaagatttaagtgattttgaagttgatcggaatcggagaagtgattttactggtaagtgggagaagatttcggcgagtattt 9316965  T
Q  101 ccggcggaggaacatcactcgccattggaaggaa 134  Q
    |||||||| || | |||  |||||||||||||||    
T  9316966 ccggcggaagaccgtcagccgccattggaaggaa 9316999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 9292778 - 9292857
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||| ||||||||||||||| ||| |||||||||||  ||||||||||||||| |||| |||||||| ||||||    
T  9292778 gaatcgattagggatttaagtgattttgaaattgatcggaatctgagaagtgattttactggtacgcgggagaagatttc 9292857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12011901 - 12011813
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| |||||||||||||||||||||||||| |||||||| |||||| |||||||||||| |    |||||||||||| ||||||    
T  12011901 aagttgtgagaatcgattatggatttaagtgattttgaagttgagcggaatcggagaagtgattgtggatgtaagcgggagaagatttc 12011813  T

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Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 8578807 - 8578748
Alignment:
Q  27 aagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggat 86  Q
    ||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||    
T  8578807 aagtgatttagaaattgatcggaatcggagaagggattgtaccggtaagcgggagaggat 8578748  T

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Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9357957 - 9358034
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgg 78  Q
    |||| ||| |||||||||| ||||||||||||||| ||||||||||  ||  |||||||||||||||| |||||||||    
T  9357957 aagttgtgagaatcgattaaggatttaagtgattttgaagttgatccaaaccggagaagtgattttactggtaagcgg 9358034  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7612737 - 7612825
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| ||||| |||| ||||||||| ||||||||| ||||||||||| |||| || | || |||||||||||| |||||||||||    
T  7612737 aagttgtgggaatcaattaaggatttaagcgatttagaaattgatcggaatcggaggagggtttgtaccggtaagcgagagaggatttc 7612825  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12005473 - 12005385
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| |||||||||||||||||||| ||||  |||||||| |||||| |||||||||||| |   ||||||||||||| ||||||    
T  12005473 aagttgtgagaatcgattatggatttaagcgattctgaagttgagcggaatcggagaagtgattgtggaggtaagcgggagaagatttc 12005385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 7114944 - 7114865
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||| ||||||||||||||| ||||||||||||||| | |||||||||  ||| |||| ||| |||| ||||||    
T  7114944 gaatcgattaaggatttaagtgattttgaagttgatcggaatcgaagaagtgatcgtactggtaggcgagagaagatttc 7114865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 9283473 - 9283394
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    ||||| |||| ||||  ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||| ||||||    
T  9283473 gaatctattagggatcgaagtgatttagaagttgatcggaatcggagtagtgatttaactggtaagcaggagaagatttc 9283394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 9365445 - 9365494
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaag 59  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||    
T  9365445 gaatcgattatggatttaagtgattttgaggttgatcggaatcggagaag 9365494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14551160 - 14551215
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggag 56  Q
    |||| ||| |||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  14551160 aagttgtgggaatcgattagggattgaagtgattttgaagttgatcggaattggag 14551215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11986833 - 11986745
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| ||||| |||||||||||||| ||||  |||||||| |||||| |||||||||||| |    |||||||||||| ||||||    
T  11986833 aagttgtgagaatcaattatggatttaagcgattctgaagttgagcggaatcggagaagtgattgtggatgtaagcgggagaagatttc 11986745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 9275385 - 9275452
Alignment:
Q  22 gatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||||||| ||  |||||||||||  ||||||||||| ||| ||||| ||||||| ||||||    
T  9275385 gatttaagtgattttgagattgatcggaatcagagaagtgattgtactggtaaccgggagaagatttc 9275452  T

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Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 17565400 - 17565334
Alignment:
Q  23 atttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    ||||||||||||| || |||||||||| | |||| || |||| ||| |||||||| |||||||||||    
T  17565400 atttaagtgatttcgacgttgatcggagtcggaggagggattgtactggtaagcgagagaggatttc 17565334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5300 - 5388
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  5300 aagttgtgagaatcgattatggatttaagtgattttgaagttgatcggaatcggagaagtgattttaccggtaagcgggagaagatttc 5388  T

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Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37463363 - 37463451
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| ||||||||||  |||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||    
T  37463363 aagttgtgagaatcgattaaagatttaagtgattttgaagttgatcggaatcggagaagtgattctactggtaaacgggagaggatttc 37463451  T

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Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 39428733 - 39428807
Alignment:
Q  15 gattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    ||||| |||||||| | |||| |||||||||||||||||||| || ||||  |||||||||||||||||||||||    
T  39428733 gattaaggatttaactcattttgaagttgatcggaattggaggagggattgcaccggtaagcgggagaggatttc 39428807  T

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Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 26575729 - 26575808
Alignment:
Q  10 gaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||||||||| | ||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||    
T  26575729 gaatcgattaagaatttaagtgattttgaagttgatcggaatcggagaagtgatattaccggtaaacgggagaagatttc 26575808  T

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Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36225591 - 36225679
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||||||||||||||  |||||||||||||| ||||||||||||||| |||| || ||||  ||  |||||||||||||||||||    
T  36225591 aagttgtgcgaatcgattaacgatttaagtgattttgaagttgatcggaatcggaggagggattgcactagtaagcgggagaggatttc 36225679  T

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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41966030 - 41965942
Alignment:
Q  1 aagtggtgcgaatcgattatggatttaagtgatttagaagttgatcggaattggagaagtgattttaccggtaagcgggagaggatttc 89  Q
    |||| ||| |||||||||| ||||  ||||||||| || |||||||||||| |||||| |||||||||||||||  |||||| ||||||    
T  41966030 aagttgtgggaatcgattaaggatcgaagtgatttcgaggttgatcggaatcggagaactgattttaccggtaatagggagaagatttc 41965942  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 286 - 370
Target Start/End: Original strand, 11634231 - 11634316
Alignment:
Q  286 tgtgttaaacatcatgcttaaggaagttgatgtgaagtctttac-tattatgcgttggttatttttattttagtaactgctcttca 370  Q
    ||||||||| |||||||||| |   | ||||||| |||| |||  ||||||| |||||||||||||||||||||||||||| ||||    
T  11634231 tgtgttaaatatcatgcttaggactgctgatgtggagtcattatgtattatgtgttggttatttttattttagtaactgctgttca 11634316  T

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