View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16751_low_34 (Length: 405)

Name: NF16751_low_34
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16751_low_34
NF16751_low_34
[»] chr3 (7 HSPs)
chr3 (173-388)||(41358195-41358410)
chr3 (14-183)||(41358425-41358592)
chr3 (11-95)||(33178984-33179068)
chr3 (14-83)||(26370946-26371015)
chr3 (14-95)||(41218247-41218328)
chr3 (14-83)||(37516769-37516838)
chr3 (14-83)||(28311425-28311494)
[»] chr6 (9 HSPs)
chr6 (14-86)||(9696198-9696270)
chr6 (14-83)||(1780947-1781016)
chr6 (14-83)||(10397713-10397782)
chr6 (14-83)||(34248917-34248986)
chr6 (11-100)||(15122183-15122272)
chr6 (11-83)||(31188216-31188288)
chr6 (11-57)||(28614334-28614380)
chr6 (14-83)||(2941365-2941434)
chr6 (14-95)||(9046807-9046888)
[»] chr2 (7 HSPs)
chr2 (11-95)||(16220920-16221004)
chr2 (14-83)||(2475949-2476018)
chr2 (14-95)||(6799777-6799858)
chr2 (14-95)||(17249473-17249554)
chr2 (14-83)||(29257509-29257578)
chr2 (14-57)||(41010655-41010698)
chr2 (14-95)||(17148939-17149020)
[»] chr5 (12 HSPs)
chr5 (14-95)||(14832703-14832784)
chr5 (14-95)||(15675455-15675536)
chr5 (14-83)||(33007028-33007097)
chr5 (11-95)||(1672379-1672463)
chr5 (14-86)||(21069163-21069235)
chr5 (11-100)||(12267270-12267359)
chr5 (14-95)||(13942645-13942726)
chr5 (14-57)||(34846488-34846531)
chr5 (14-101)||(16567933-16568020)
chr5 (14-95)||(2476507-2476588)
chr5 (14-95)||(7161976-7162057)
chr5 (14-83)||(35469045-35469114)
[»] chr4 (8 HSPs)
chr4 (11-100)||(4728698-4728787)
chr4 (14-103)||(32006026-32006115)
chr4 (11-57)||(41972372-41972418)
chr4 (14-83)||(10058659-10058728)
chr4 (14-95)||(31364257-31364338)
chr4 (14-83)||(46645746-46645815)
chr4 (14-83)||(52373897-52373966)
chr4 (14-83)||(4552328-4552397)
[»] chr1 (10 HSPs)
chr1 (14-95)||(14727472-14727553)
chr1 (14-57)||(6802014-6802057)
chr1 (14-105)||(49898530-49898621)
chr1 (14-95)||(4774114-4774195)
chr1 (14-83)||(31844545-31844614)
chr1 (14-83)||(33468875-33468944)
chr1 (14-55)||(4641969-4642010)
chr1 (14-83)||(25007606-25007675)
chr1 (14-83)||(37153894-37153963)
chr1 (14-83)||(44305554-44305623)
[»] chr7 (9 HSPs)
chr7 (14-106)||(22206567-22206659)
chr7 (14-106)||(22228080-22228172)
chr7 (14-57)||(38128911-38128954)
chr7 (14-95)||(3012464-3012545)
chr7 (14-57)||(26722889-26722932)
chr7 (22-95)||(5991312-5991385)
chr7 (14-99)||(7873108-7873193)
chr7 (22-95)||(21932634-21932707)
chr7 (22-83)||(41759531-41759592)
[»] chr8 (2 HSPs)
chr8 (11-86)||(27321763-27321838)
chr8 (14-83)||(36406393-36406462)
[»] scaffold0618 (1 HSPs)
scaffold0618 (14-83)||(1838-1907)
[»] scaffold0638 (1 HSPs)
scaffold0638 (14-84)||(4220-4290)


Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 173 - 388
Target Start/End: Complemental strand, 41358410 - 41358195
Alignment:
Q  173 tttatttttaattatcgttcatcattaaagttctcaaaataattttctcttaaatttcctgaaaacataagcaccatcaagaccaagttcaacggtccaa 272  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41358410 tttatttttaattattgttcatcattaaagttctcaaaataattttctcttaaatttcctgaaaacataagcaccatcaagaccaagttcaacggtccaa 41358311  T
Q  273 gtgtttgtggtggcagtaattttctccacccctaaaatagtaaaacgtctttgggatgtacacatgtaaaagacaaaaaatgtgtgcctttgcaaagtat 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41358310 gtgtttgtggtggcagtaattttctccacccctaaaatagtaaaacgtctttgggatgtacacatgtaaaagacaaaaaatgtgtgcctttgcaaagtat 41358211  T
Q  373 atatatttgcagataa 388  Q
    ||||||||||||||||    
T  41358210 atatatttgcagataa 41358195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 41358592 - 41358425
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgtttacaatggtatt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||       | ||| |||||| |||||||||  |||||||| ||||||||||||||||    
T  41358592 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataatttttttgtcca-actcta-aaaatttcttgctccgccgttgtttacaatggtatt 41358495  T
Q  114 gttcataagtgtaataaaaaattggaagtgctcgtagttacaaacttttactcaagatatttatttttaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41358494 gttcataagtgtaataaaaaattggaagtgctcgtagttacaaactttcactcaagatatttatttttaa 41358425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 33179068 - 33178984
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    |||||||||| |||||| |||||||| ||| ||||||||||||||||       ||||||||||||||||||| || ||||||||    
T  33179068 agaaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttgcccagactctataaaattcctgactccgcc 33178984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 26371015 - 26370946
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||||||||||||||||    
T  26371015 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatt 26370946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 41218328 - 41218247
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       ||| ||||||||||||||| || ||||||||    
T  41218328 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcctagactctataaaattcctgactccgcc 41218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 37516769 - 37516838
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  37516769 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 37516838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 28311425 - 28311494
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| || ||||||||| ||| ||||||||||||       |||||||||||||||||||    
T  28311425 aaatgtgaaattattcgtaggaaggaagtaatgttttgcgataaattttttgcccagactctataaaatt 28311494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 9696198 - 9696270
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttct 86  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       ||||||||||||||||||||||    
T  9696198 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatttct 9696270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 1781016 - 1780947
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||||||||||||||||    
T  1781016 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttatgcccagactctataaaatt 1780947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 10397782 - 10397713
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||||||||||||||||    
T  10397782 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatt 10397713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 34248986 - 34248917
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  34248986 aaatgtgaaattatccgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 34248917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 15122183 - 15122272
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgt 100  Q
    |||||||||| |||||| ||||| ||| || ||||||||||||||||       ||||| ||||||||||||| || |||||||| ||||    
T  15122183 agaaaatgtgaaattattcgcagaaagaaagtaacgttttgcgataaattttttgcccaaactctataaaattcctgactccgccactgt 15122272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 31188288 - 31188216
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  31188288 agaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaatt 31188216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 28614380 - 28614334
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    |||||||||| |||||| |||||||||||| |||| |||||||||||    
T  28614380 agaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 28614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 2941365 - 2941434
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  2941365 aaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 2941434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 9046888 - 9046807
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |  ||||||||||||||||||| ||||||       ||||| ||||||||||||||||  |||||||    
T  9046888 aaatgtgaaattattcaaaggaaggaaataacgttttccgataaattttttgcccaaactctataaaatttctggctccgcc 9046807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 16221004 - 16220920
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||       |||||| |||||||||||||||  |||||||    
T  16221004 agaaaatgtgcaattatatgcagaaaggaaataacgttttgcgataatttttttgcccaggctctataaaatttctggctccgcc 16220920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 2475949 - 2476018
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  2475949 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaatt 2476018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 6799858 - 6799777
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| |||||||||| |||||       |||||| |||||||||||| ||| |||||||    
T  6799858 aaatgtgaaattattcgcaggaaggaactaacgttttgtgataaaaaatttgcccaggctctataaaattcctagctccgcc 6799777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 17249473 - 17249554
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| ||||||||| || ||||||||||| ||||       ||||||||||||||||||| || ||||||||    
T  17249473 aaatgtgaaattattcgcaggaagaaagtaacgttttgctataaatattttgcccagactctataaaattcctgactccgcc 17249554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 29257509 - 29257578
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||       |||||||||||||||||||    
T  29257509 aaatgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaatt 29257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 41010655 - 41010698
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||    
T  41010655 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 41010698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 17148939 - 17149020
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| |||||||||| |||||       |||||  ||| |||||||||||| |||||||    
T  17148939 aaatgtgaaattattcgcaggaaggaagtaacgttttgagataaattttttgcccaagctcaataaaatttctagctccgcc 17149020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 14832784 - 14832703
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| ||| ||||||||||||       ||||||||||||||||||||||  |||||||    
T  14832784 aaatgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgcccagactctataaaatttctggctccgcc 14832703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 15675455 - 15675536
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| |||||||||||| ||| |||||||    
T  15675455 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgcc 15675536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 33007028 - 33007097
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||||||||||||||||    
T  33007028 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatt 33007097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 1672463 - 1672379
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    |||||||||| |||||| |||||||||||| |||| |||||||||||       |||||| |||||||||||||||  |||||||    
T  1672463 agaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggctccgcc 1672379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 21069163 - 21069235
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttct 86  Q
    ||||||| ||||||   |||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  21069163 aaatgtgaaattatttccaggaaggaaataacgttttgcgataaattttttgcccagactctataaaatttct 21069235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 12267359 - 12267270
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgt 100  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||||       |||||| ||||||||||| |||  ||||||| ||||    
T  12267359 agaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataaactttttgcccaggctctataaaatgtctggctccgccactgt 12267270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 13942726 - 13942645
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||        ||||| |||||||||||||||  |||||||    
T  13942726 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttacccaggctctataaaatttctggctccgcc 13942645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 34846488 - 34846531
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||    
T  34846488 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 34846531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 16567933 - 16568020
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgtt 101  Q
    ||||||| |||||| | |||||||||| |||| |||||||||||       |||||  ||||||||||||||| |||||||| |||||    
T  16567933 aaatgtgaaattattcccaggaaggaagtaacattttgcgataatttttttgcccaagctctataaaatttctgactccgccactgtt 16568020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 2476507 - 2476588
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||       |||||| ||||||| |||||||  |||||||    
T  2476507 aaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctatataatttctggctccgcc 2476588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 7162057 - 7161976
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| ||||||  ||||||||||| |||| |||||||||||       |||||| |||||||||||||||  |||||||    
T  7162057 aaatgtgaaattatttgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggctccgcc 7161976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 35469045 - 35469114
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| |||| |||||||||||       |||||| ||||||||||||    
T  35469045 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataaattttttgcccaggctctataaaatt 35469114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 4728698 - 4728787
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgt 100  Q
    |||||||||| ||||||  ||||||||||| ||||||||||||||||       |||||| |||||||||||| ||| ||||||| ||||    
T  4728698 agaaaatgtgaaattatttgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctagctccgccactgt 4728787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 32006026 - 32006115
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgttta 103  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||       |||||||||||||||||||  | |||||||| |||||||    
T  32006026 aaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcatgactccgccactgttta 32006115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 41972418 - 41972372
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||||    
T  41972418 agaaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 41972372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 10058659 - 10058728
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  10058659 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 10058728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 31364257 - 31364338
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||  |||||||||||||||  |||||||    
T  31364257 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccatgctctataaaatttctggctccgcc 31364338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 46645746 - 46645815
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||        ||||||||||||||||||    
T  46645746 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaatttttttcccagactctataaaatt 46645815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 52373897 - 52373966
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       || ||||||||||||||||    
T  52373897 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcacagactctataaaatt 52373966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 4552328 - 4552397
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| ||||||  | ||||||||| ||||||||||||||||       |||||||||||||||||||    
T  4552328 aaatgtgaaattatttgtaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaatt 4552397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000009; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 14727472 - 14727553
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| |||||||||||||||  |||||||    
T  14727472 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaatttctggctccgcc 14727553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 6802057 - 6802014
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  6802057 aaatgtgcaattatccgcatgtaggaaataacgttttgcgataa 6802014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 49898530 - 49898621
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgtttaca 105  Q
    ||||||| |||||| |||||||||||  |||| |||||||||||       |||||||||||||| |||||||  ||||| |||||||||||    
T  49898530 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataaattttttgcccagactctatataatttctggctccgtcgctgtttaca 49898621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 4774114 - 4774195
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| ||||||||| || |||| |||||||||||       ||||||||||||||||||||||  |||||||    
T  4774114 aaatgtgaaattattcgcaggaagaaagtaacattttgcgataatttttttgcccagactctataaaatttctggctccgcc 4774195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 31844614 - 31844545
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| |||| |||||||||||       |||||||||||||||||||    
T  31844614 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataaattttttgcccagactctataaaatt 31844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 33468944 - 33468875
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  33468944 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 33468875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 4642010 - 4641969
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgat 55  Q
    ||||||| |||||| |||||||||||| ||||||||||||||    
T  4642010 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgat 4641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 25007606 - 25007675
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  25007606 aaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 25007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 37153963 - 37153894
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  37153963 aaatgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 37153894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 44305554 - 44305623
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| || ||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  44305554 aaatgtgaaattattcgtaggaaggaagtaacgttttgcgataatttttttgcccaggctctataaaatt 44305623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 22206659 - 22206567
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgtttacaa 106  Q
    ||||||| |||||| |||||||||||| |||| |||||||||||       |||||| |||||||||||||||  ||||||| ||| ||||||    
T  22206659 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataattttcttgcccaggctctataaaatttcttgctccgccactgattacaa 22206567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 22228080 - 22228172
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctgtttacaa 106  Q
    ||||||| |||||| |||||||||||| |||| |||||||||||       |||||| |||||||||||||||  ||||||| ||| ||||||    
T  22228080 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataattttcttgcccaggctctataaaatttcttgctccgccactgattacaa 22228172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 38128954 - 38128911
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  38128954 aaatgtgaaattatctgcaggaaggaaataacgttttgcgataa 38128911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 3012464 - 3012545
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    ||||||| |||||| | |||||||||| ||||||||||| ||||       ||||||||||||||||||||||  |||||||    
T  3012464 aaatgtgaaattattcacaggaaggaagtaacgttttgcaataatttttttgcccagactctataaaatttctggctccgcc 3012545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 26722932 - 26722889
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataa 57  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||    
T  26722932 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 26722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 5991385 - 5991312
Alignment:
Q  22 aattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    |||||| |||||||||||| |||| |||||||||||       |||||| ||||||||||||||  ||||||||    
T  5991385 aattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttccgactccgcc 5991312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 7873193 - 7873108
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgccgctg 99  Q
    ||||||| ||||||  || |||||||| |||| |||||||||||       |||||||||||||||||||||   |||||||||||    
T  7873193 aaatgtgaaattattagcgggaaggaagtaacattttgcgataatttttttgcccagactctataaaatttcaggctccgccgctg 7873108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 21932707 - 21932634
Alignment:
Q  22 aattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttctaactccgcc 95  Q
    |||||| |||||||| ||| |||| |||||||||||       ||||||||||||||||||| || ||||||||    
T  21932707 aattattcgcaggaaagaagtaacattttgcgataaattttttgcccagactctataaaattcctgactccgcc 21932634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 41759592 - 41759531
Alignment:
Q  22 aattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    |||||| |||||||||||| ||||||| ||||||||       |||||||||||||||||||    
T  41759592 aattattcgcaggaaggaagtaacgttgtgcgataaattttttgcccagactctataaaatt 41759531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 27321838 - 27321763
Alignment:
Q  11 agaaaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatttct 86  Q
    |||||||||| |||||| |||||||||||| |||| |||||||||||       |||||| |||||||||||||||    
T  27321838 agaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttct 27321763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 36406462 - 36406393
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||       |||||| ||||||||||||    
T  36406462 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaatt 36406393  T

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Target: scaffold0618 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 1838 - 1907
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaatt 83  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||       |||||||||||||||||||    
T  1838 aaatgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgcccagactctataaaatt 1907  T

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Target: scaffold0638 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 4220 - 4290
Alignment:
Q  14 aaatgtgcaattatccgcaggaaggaaataacgttttgcgataannnnnnngcccagactctataaaattt 84  Q
    ||||||| |||||| |||||||||||| |||| |||||||||||       |||||| |||||||||||||    
T  4220 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaattt 4290  T

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