View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16751_low_45 (Length: 357)

Name: NF16751_low_45
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16751_low_45
NF16751_low_45
[»] chr3 (60 HSPs)
chr3 (18-342)||(42157578-42157917)
chr3 (173-253)||(42668130-42668210)
chr3 (184-248)||(18257634-18257698)
chr3 (171-246)||(5166863-5166938)
chr3 (184-253)||(11500187-11500257)
chr3 (184-253)||(4247203-4247272)
chr3 (184-253)||(13638512-13638581)
chr3 (178-273)||(21777210-21777308)
chr3 (171-252)||(23613082-23613163)
chr3 (184-303)||(1132861-1132985)
chr3 (184-252)||(36796511-36796579)
chr3 (190-253)||(2927930-2927993)
chr3 (190-253)||(19148253-19148316)
chr3 (186-249)||(49304298-49304361)
chr3 (178-248)||(44979488-44979558)
chr3 (178-244)||(54917854-54917920)
chr3 (171-252)||(105086-105167)
chr3 (189-250)||(9112724-9112785)
chr3 (184-253)||(32858916-32858985)
chr3 (184-253)||(46891472-46891541)
chr3 (184-253)||(48444591-48444660)
chr3 (72-104)||(1133106-1133138)
chr3 (184-252)||(2420746-2420814)
chr3 (184-252)||(17642676-17642744)
chr3 (184-252)||(23163610-23163678)
chr3 (184-252)||(25428755-25428823)
chr3 (184-244)||(32708820-32708880)
chr3 (178-222)||(35586174-35586218)
chr3 (184-252)||(41961903-41961971)
chr3 (184-252)||(43007448-43007516)
chr3 (184-252)||(49860923-49860991)
chr3 (186-250)||(54372504-54372568)
chr3 (188-251)||(9241580-9241643)
chr3 (190-253)||(21494800-21494863)
chr3 (187-246)||(23420731-23420790)
chr3 (184-243)||(27681899-27681958)
chr3 (188-251)||(54089385-54089448)
chr3 (305-335)||(33193417-33193447)
chr3 (187-253)||(52620764-52620830)
chr3 (184-253)||(7302170-7302239)
chr3 (184-253)||(15499225-15499294)
chr3 (188-253)||(29623322-29623387)
chr3 (168-253)||(32720992-32721076)
chr3 (184-253)||(37545264-37545333)
chr3 (184-244)||(3333960-3334019)
chr3 (184-252)||(30121448-30121516)
chr3 (184-252)||(30131812-30131880)
chr3 (184-228)||(30697482-30697526)
chr3 (213-253)||(35283173-35283213)
chr3 (169-253)||(37674064-37674148)
chr3 (204-252)||(39499285-39499333)
chr3 (213-253)||(40674193-40674233)
chr3 (185-253)||(42178788-42178856)
chr3 (184-252)||(43237377-43237445)
chr3 (68-104)||(44400583-44400619)
chr3 (184-252)||(44412081-44412149)
chr3 (184-252)||(46312346-46312414)
chr3 (204-252)||(47714619-47714667)
chr3 (204-252)||(47789392-47789440)
chr3 (204-252)||(55439671-55439719)
[»] chr2 (47 HSPs)
chr2 (179-300)||(38216438-38216564)
chr2 (178-253)||(13110423-13110497)
chr2 (184-253)||(16625730-16625799)
chr2 (184-281)||(11205048-11205148)
chr2 (184-252)||(13767505-13767572)
chr2 (186-253)||(14167042-14167109)
chr2 (184-253)||(14385166-14385235)
chr2 (184-253)||(39670105-39670174)
chr2 (184-252)||(8410856-8410924)
chr2 (184-244)||(29880859-29880919)
chr2 (187-247)||(39913365-39913425)
chr2 (184-239)||(3022795-3022850)
chr2 (186-253)||(5193151-5193218)
chr2 (190-253)||(11522112-11522175)
chr2 (171-252)||(14196378-14196455)
chr2 (190-253)||(42946656-42946719)
chr2 (190-253)||(44656682-44656745)
chr2 (184-250)||(36030882-36030948)
chr2 (188-253)||(31809491-31809556)
chr2 (184-249)||(38325194-38325259)
chr2 (184-252)||(4042051-4042119)
chr2 (184-252)||(8555702-8555770)
chr2 (184-252)||(13765865-13765933)
chr2 (184-252)||(36567204-36567272)
chr2 (184-252)||(38293975-38294043)
chr2 (184-279)||(39205072-39205172)
chr2 (184-252)||(40357544-40357612)
chr2 (184-252)||(44020426-44020494)
chr2 (185-248)||(16519016-16519079)
chr2 (197-248)||(26434445-26434496)
chr2 (168-253)||(27987755-27987837)
chr2 (168-253)||(28074288-28074370)
chr2 (184-253)||(4666221-4666290)
chr2 (184-253)||(21626211-21626280)
chr2 (187-244)||(25463674-25463731)
chr2 (216-253)||(43190507-43190544)
chr2 (204-252)||(3038893-3038941)
chr2 (204-252)||(3119798-3119846)
chr2 (73-105)||(5322287-5322319)
chr2 (204-252)||(8990909-8990957)
chr2 (213-253)||(11950084-11950124)
chr2 (184-252)||(14008255-14008323)
chr2 (184-252)||(18780471-18780539)
chr2 (72-104)||(22333949-22333981)
chr2 (184-252)||(26427619-26427687)
chr2 (184-252)||(31550188-31550256)
chr2 (184-252)||(38023373-38023441)
[»] chr8 (43 HSPs)
chr8 (168-250)||(39194020-39194102)
chr8 (172-250)||(31149991-31150069)
chr8 (184-253)||(43007784-43007853)
chr8 (171-250)||(32533269-32533348)
chr8 (178-240)||(32502932-32502993)
chr8 (184-252)||(13258573-13258641)
chr8 (213-252)||(2457830-2457869)
chr8 (184-250)||(7079920-7079986)
chr8 (188-253)||(11961451-11961516)
chr8 (188-253)||(13865022-13865087)
chr8 (203-255)||(32237-32289)
chr8 (184-252)||(3404500-3404568)
chr8 (188-252)||(29612078-29612142)
chr8 (184-252)||(33230973-33231041)
chr8 (186-250)||(35353917-35353980)
chr8 (184-252)||(36102816-36102884)
chr8 (184-228)||(40985000-40985044)
chr8 (188-252)||(42438390-42438454)
chr8 (190-253)||(22330776-22330839)
chr8 (213-252)||(43733075-43733114)
chr8 (184-242)||(3394058-3394116)
chr8 (190-248)||(13406518-13406576)
chr8 (173-243)||(33896515-33896585)
chr8 (178-252)||(36906274-36906348)
chr8 (184-253)||(8948711-8948780)
chr8 (184-253)||(11876940-11877009)
chr8 (184-253)||(11891947-11892016)
chr8 (184-241)||(13537440-13537497)
chr8 (184-241)||(13626988-13627045)
chr8 (184-253)||(27085434-27085503)
chr8 (184-253)||(29584260-29584329)
chr8 (204-253)||(41455345-41455394)
chr8 (70-111)||(41866289-41866330)
chr8 (204-252)||(1941999-1942047)
chr8 (179-223)||(5255153-5255197)
chr8 (184-228)||(11742632-11742676)
chr8 (184-252)||(15108190-15108258)
chr8 (178-234)||(32874838-32874894)
chr8 (204-252)||(34272602-34272650)
chr8 (184-248)||(34349806-34349870)
chr8 (184-252)||(35856456-35856524)
chr8 (184-252)||(37659457-37659525)
chr8 (168-241)||(39418147-39418222)
[»] chr1 (63 HSPs)
chr1 (173-243)||(32123558-32123628)
chr1 (169-253)||(43530209-43530293)
chr1 (184-253)||(24436858-24436927)
chr1 (184-253)||(34552014-34552083)
chr1 (184-253)||(35619440-35619509)
chr1 (184-252)||(2175421-2175489)
chr1 (184-252)||(14153198-14153266)
chr1 (188-252)||(50476615-50476679)
chr1 (213-253)||(51572325-51572365)
chr1 (184-252)||(52073384-52073452)
chr1 (186-253)||(19652223-19652290)
chr1 (202-253)||(40243449-40243500)
chr1 (178-253)||(43036243-43036318)
chr1 (184-253)||(41432688-41432757)
chr1 (185-245)||(1278563-1278623)
chr1 (184-244)||(10618918-10618978)
chr1 (184-252)||(17675283-17675351)
chr1 (184-252)||(23871389-23871457)
chr1 (184-252)||(33991628-33991696)
chr1 (184-252)||(36269830-36269898)
chr1 (188-252)||(36668579-36668643)
chr1 (184-252)||(42161979-42162047)
chr1 (171-235)||(48865520-48865584)
chr1 (213-252)||(2492981-2493020)
chr1 (178-252)||(36269346-36269418)
chr1 (173-224)||(49547096-49547147)
chr1 (185-252)||(50402828-50402895)
chr1 (186-252)||(1523682-1523748)
chr1 (70-104)||(5584744-5584778)
chr1 (184-250)||(5970367-5970433)
chr1 (184-242)||(17416644-17416702)
chr1 (184-281)||(30543289-30543391)
chr1 (204-253)||(2925881-2925930)
chr1 (184-253)||(17760411-17760480)
chr1 (187-252)||(27500071-27500136)
chr1 (184-241)||(33579351-33579408)
chr1 (178-227)||(40136144-40136193)
chr1 (184-253)||(42806256-42806325)
chr1 (203-252)||(50162222-50162271)
chr1 (184-249)||(51303101-51303166)
chr1 (204-252)||(896441-896489)
chr1 (213-253)||(6538044-6538084)
chr1 (184-228)||(6538098-6538142)
chr1 (204-252)||(7964061-7964109)
chr1 (212-252)||(8156291-8156331)
chr1 (216-252)||(9595650-9595686)
chr1 (184-248)||(11017692-11017756)
chr1 (184-248)||(12293903-12293967)
chr1 (204-252)||(13061343-13061391)
chr1 (184-252)||(13255431-13255499)
chr1 (204-252)||(32299189-32299237)
chr1 (204-252)||(32300142-32300190)
chr1 (185-248)||(36477830-36477894)
chr1 (70-102)||(37649798-37649830)
chr1 (184-244)||(38857939-38857999)
chr1 (184-252)||(39889584-39889652)
chr1 (73-113)||(41432942-41432982)
chr1 (184-252)||(42488553-42488621)
chr1 (204-252)||(43571911-43571959)
chr1 (185-253)||(45752164-45752232)
chr1 (204-252)||(47206370-47206418)
chr1 (184-252)||(47905615-47905683)
chr1 (184-248)||(50097705-50097769)
[»] chr5 (49 HSPs)
chr5 (184-252)||(28154777-28154845)
chr5 (184-252)||(37909078-37909146)
chr5 (184-253)||(1474942-1475011)
chr5 (168-252)||(5696492-5696574)
chr5 (178-253)||(1176368-1176441)
chr5 (184-252)||(2021067-2021135)
chr5 (184-248)||(6491275-6491339)
chr5 (184-252)||(32824735-32824803)
chr5 (173-279)||(13839475-13839585)
chr5 (168-288)||(31632883-31633005)
chr5 (168-230)||(1175856-1175918)
chr5 (178-251)||(2163992-2164065)
chr5 (184-253)||(6044619-6044688)
chr5 (184-253)||(19389754-19389823)
chr5 (184-253)||(25779581-25779650)
chr5 (184-253)||(26018827-26018896)
chr5 (192-253)||(35704980-35705041)
chr5 (184-252)||(25027009-25027077)
chr5 (184-252)||(26149690-26149758)
chr5 (190-253)||(1935039-1935102)
chr5 (190-248)||(4841641-4841699)
chr5 (185-243)||(29709606-29709664)
chr5 (193-247)||(43265264-43265318)
chr5 (188-253)||(5088800-5088865)
chr5 (184-241)||(9096409-9096466)
chr5 (188-253)||(9684721-9684786)
chr5 (184-252)||(11168326-11168394)
chr5 (184-252)||(33718268-33718336)
chr5 (184-252)||(27489824-27489894)
chr5 (187-253)||(17668063-17668129)
chr5 (188-250)||(25626534-25626596)
chr5 (188-253)||(2679816-2679881)
chr5 (184-253)||(3081258-3081327)
chr5 (199-240)||(4764780-4764821)
chr5 (188-241)||(7147493-7147546)
chr5 (184-253)||(13293910-13293979)
chr5 (184-253)||(15399901-15399970)
chr5 (186-227)||(28523730-28523771)
chr5 (184-252)||(38289400-38289469)
chr5 (184-252)||(1658264-1658332)
chr5 (184-252)||(4648913-4648981)
chr5 (188-252)||(15770127-15770191)
chr5 (204-252)||(17092984-17093032)
chr5 (184-228)||(22114816-22114860)
chr5 (184-252)||(27480098-27480166)
chr5 (72-104)||(35683653-35683685)
chr5 (184-252)||(35701490-35701558)
chr5 (184-252)||(38302284-38302352)
chr5 (184-252)||(41695064-41695132)
[»] chr4 (57 HSPs)
chr4 (184-252)||(49936589-49936657)
chr4 (187-253)||(8827749-8827815)
chr4 (184-253)||(28880077-28880146)
chr4 (184-253)||(40422999-40423068)
chr4 (184-280)||(35959240-35959336)
chr4 (184-248)||(56117973-56118037)
chr4 (184-275)||(56439299-56439393)
chr4 (184-253)||(32648930-32648999)
chr4 (184-253)||(46669871-46669940)
chr4 (184-252)||(31530106-31530174)
chr4 (184-252)||(32060733-32060801)
chr4 (172-252)||(32485916-32485996)
chr4 (184-252)||(42649909-42649979)
chr4 (187-253)||(6836486-6836552)
chr4 (190-244)||(34713049-34713102)
chr4 (186-248)||(47047394-47047456)
chr4 (184-246)||(51431037-51431099)
chr4 (184-242)||(53013684-53013742)
chr4 (297-335)||(56439420-56439458)
chr4 (184-253)||(8828136-8828205)
chr4 (184-253)||(16535777-16535846)
chr4 (184-253)||(27143264-27143333)
chr4 (184-253)||(31428887-31428956)
chr4 (184-253)||(52594552-52594621)
chr4 (184-252)||(7182117-7182185)
chr4 (184-252)||(21730253-21730321)
chr4 (184-252)||(37756649-37756717)
chr4 (184-252)||(38317154-38317222)
chr4 (186-242)||(41495568-41495624)
chr4 (184-252)||(41844522-41844590)
chr4 (184-252)||(47669897-47669965)
chr4 (190-241)||(6434860-6434911)
chr4 (184-243)||(7360814-7360873)
chr4 (178-253)||(46176597-46176672)
chr4 (190-253)||(48620375-48620438)
chr4 (186-225)||(54135758-54135797)
chr4 (186-252)||(41363740-41363806)
chr4 (184-250)||(43104175-43104241)
chr4 (184-253)||(368143-368212)
chr4 (188-241)||(27485193-27485246)
chr4 (70-127)||(42650843-42650900)
chr4 (184-253)||(42759578-42759646)
chr4 (184-253)||(46176863-46176932)
chr4 (184-253)||(47063768-47063837)
chr4 (168-252)||(2347801-2347885)
chr4 (204-252)||(3126958-3127006)
chr4 (68-104)||(8084989-8085025)
chr4 (209-253)||(11976923-11976967)
chr4 (204-252)||(13270040-13270088)
chr4 (184-248)||(17873287-17873351)
chr4 (192-248)||(18369788-18369844)
chr4 (184-252)||(24291472-24291540)
chr4 (192-248)||(36593079-36593135)
chr4 (184-252)||(38366114-38366182)
chr4 (184-252)||(48830740-48830808)
chr4 (204-252)||(49404569-49404617)
chr4 (68-104)||(56205250-56205286)
[»] chr6 (29 HSPs)
chr6 (184-250)||(33939049-33939115)
chr6 (184-253)||(8439321-8439390)
chr6 (186-247)||(4465018-4465079)
chr6 (186-247)||(22817269-22817330)
chr6 (184-252)||(13120348-13120416)
chr6 (191-253)||(20381799-20381861)
chr6 (186-303)||(26713884-26714006)
chr6 (184-246)||(33677116-33677178)
chr6 (184-253)||(2502292-2502361)
chr6 (184-252)||(5825419-5825487)
chr6 (169-253)||(19477342-19477426)
chr6 (184-252)||(23095054-23095122)
chr6 (184-252)||(24734967-24735035)
chr6 (184-252)||(26574321-26574389)
chr6 (169-232)||(463178-463241)
chr6 (178-253)||(26289637-26289712)
chr6 (204-247)||(33212412-33212455)
chr6 (70-104)||(26713730-26713764)
chr6 (188-253)||(6855737-6855802)
chr6 (184-253)||(12779599-12779668)
chr6 (184-249)||(32222092-32222157)
chr6 (184-253)||(33590255-33590324)
chr6 (184-252)||(1029380-1029448)
chr6 (189-253)||(2523478-2523542)
chr6 (184-252)||(26481057-26481125)
chr6 (184-252)||(29241759-29241827)
chr6 (213-253)||(31345326-31345366)
chr6 (203-251)||(33054504-33054552)
chr6 (184-248)||(34914718-34914782)
[»] chr7 (50 HSPs)
chr7 (173-245)||(13858416-13858488)
chr7 (184-273)||(46509327-46509420)
chr7 (184-253)||(42266933-42267002)
chr7 (184-252)||(28437468-28437536)
chr7 (168-247)||(42112869-42112948)
chr7 (184-302)||(45510374-45510497)
chr7 (178-232)||(31770246-31770300)
chr7 (186-252)||(45066810-45066876)
chr7 (184-253)||(4787929-4787998)
chr7 (184-253)||(17818372-17818441)
chr7 (168-237)||(24923304-24923373)
chr7 (184-253)||(31891362-31891430)
chr7 (184-253)||(36845367-36845436)
chr7 (184-253)||(38138017-38138086)
chr7 (184-253)||(38991399-38991468)
chr7 (184-252)||(5967979-5968047)
chr7 (184-248)||(7391308-7391372)
chr7 (184-248)||(33810138-33810202)
chr7 (204-252)||(41002197-41002245)
chr7 (212-252)||(42382741-42382781)
chr7 (204-252)||(43665115-43665163)
chr7 (184-252)||(46449259-46449327)
chr7 (190-253)||(33187779-33187842)
chr7 (184-247)||(38233662-38233725)
chr7 (185-252)||(43778502-43778569)
chr7 (204-239)||(45471863-45471898)
chr7 (187-253)||(14676316-14676382)
chr7 (178-248)||(33113559-33113629)
chr7 (188-242)||(36907380-36907434)
chr7 (184-281)||(38505270-38505372)
chr7 (216-250)||(48049574-48049608)
chr7 (204-253)||(1278024-1278073)
chr7 (190-243)||(3363703-3363756)
chr7 (192-249)||(6746513-6746570)
chr7 (178-231)||(7181392-7181445)
chr7 (186-247)||(17884123-17884184)
chr7 (184-253)||(23465926-23465995)
chr7 (190-243)||(38987489-38987542)
chr7 (70-103)||(44643652-44643685)
chr7 (199-243)||(374477-374521)
chr7 (73-121)||(3658327-3658375)
chr7 (204-244)||(12884694-12884734)
chr7 (178-242)||(20513405-20513469)
chr7 (184-252)||(23620720-23620787)
chr7 (204-252)||(33406578-33406626)
chr7 (186-253)||(35264819-35264887)
chr7 (188-252)||(40002421-40002485)
chr7 (184-252)||(42620278-42620346)
chr7 (204-252)||(43188944-43188992)
chr7 (184-252)||(47275928-47275996)
[»] scaffold0927 (1 HSPs)
scaffold0927 (168-253)||(2820-2905)
[»] scaffold1763 (1 HSPs)
scaffold1763 (184-248)||(530-594)
[»] scaffold0717 (1 HSPs)
scaffold0717 (184-252)||(1665-1733)
[»] scaffold1562 (1 HSPs)
scaffold1562 (184-252)||(227-295)
[»] scaffold1158 (1 HSPs)
scaffold1158 (184-252)||(2298-2366)
[»] scaffold0952 (1 HSPs)
scaffold0952 (184-252)||(3596-3664)
[»] scaffold0636 (1 HSPs)
scaffold0636 (184-252)||(8478-8546)
[»] scaffold0245 (1 HSPs)
scaffold0245 (185-245)||(4240-4300)
[»] scaffold0229 (1 HSPs)
scaffold0229 (185-245)||(4571-4631)
[»] scaffold0028 (1 HSPs)
scaffold0028 (184-252)||(35381-35449)
[»] scaffold0002 (1 HSPs)
scaffold0002 (186-253)||(90813-90880)
[»] scaffold0248 (1 HSPs)
scaffold0248 (184-253)||(122-191)
[»] scaffold0031 (1 HSPs)
scaffold0031 (73-105)||(93675-93707)


Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 42157578 - 42157917
Alignment:
Q  18 cgattatgataatcannnnnnnagtggaataattgtttttctagggaacattccttaaggctttgtttgcgagtttgtaggggaaggtaagagaggcctt 117  Q
    |||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42157578 cgattatgataatcatttttttagtcgaataattgtttttctagggaacattccttaaggctttgtttgcgagtttgtaggggaaggtaagagagggctt 42157677  T
Q  118 tgggtggtgaaggagagtaggggaaatagagaaatatttcacannnnnnngaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatata 217  Q
    |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42157678 tgggtggtgaaggagagtaggggaaatagagaaatatttcacatttttttgaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatata 42157777  T
Q  218 tttttaattttgagagtattataacaacatagattacaagaatttatctaaaccctccaaaaccttacttctatataat---------------ttttga 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||    
T  42157778 tttttaattttgagagtattataacaacatagattacaagaatttatctaaaccctccaaaaccttacttctatataatttttgagctccctgattttga 42157877  T
Q  303 ggggattttgtgttatgaagaaaaacaaacccccattcat 342  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42157878 ggggattttgtgttatgaagaaaaacaaacccccattcat 42157917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 42668210 - 42668130
Alignment:
Q  173 agtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||| ||||| ||| ||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||    
T  42668210 agtgtttttgtagataatgataaatgaatgtttatcattggtacatttttaattttgagaatattataacaacatagatta 42668130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 18257634 - 18257698
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  ||||||||| ||||||||||||||||| || ||| |||||||||||||||    
T  18257634 agagaatgataaactaatgtttatgattcatatatttttaatattaagaatattataacaacata 18257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 5166863 - 5166938
Alignment:
Q  171 agagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaaca 246  Q
    ||||| |||||| ||||||| || ||||||||||||||||| ||||||| ||||| ||| ||||||||| ||||||    
T  5166863 agagttcttttgtagagaataattaatgaatgtttatcattaatatattcttaatgttgggagtattatgacaaca 5166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 11500257 - 11500187
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatata-tttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||||||| ||| ||||| ||||||||||| ||| ||||||||||||||| ||||    
T  11500257 agagaatgataaattaatgtttataattaatatattttttaattttaagaatattataacaacatatatta 11500187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 4247272 - 4247203
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||| | ||||||||    
T  4247272 agagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataactaaatagatta 4247203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 13638581 - 13638512
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||| | ||||||||    
T  13638581 agagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataactatatagatta 13638512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 273
Target Start/End: Original strand, 21777210 - 21777308
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta-----caagaatttatctaaaccc 272  Q
    ||||| |||||||||||||||||||||||||||| |||||||| | |||||  | ||||||||||||  |||||||      ||||||||||||||||||    
T  21777210 ttttgtagagaatgataaatgaatgtttatcattaatatatttcttatttt--gtgtattataacaaggtagattagatttgaagaatttatctaaaccc 21777307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 23613082 - 23613163
Alignment:
Q  171 agagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||| ||||| ||||||||||||| ||||   ||| ||| | ||||||| ||||||||||||||||||| ||||||||||    
T  23613082 agagtggttttgtagagaatgataaacgaatcactataattaaaatattttaaattttgagagtattataataacatagatt 23613163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 1132861 - 1132985
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta-----caagaatttatctaaaccctccaaa 278  Q
    |||||||||||||| |||||| ||  || |||||||||||||||| ||| ||||| ||| ||||||||||      ||||||| || |||||||||||||    
T  1132861 agagaatgataaattaatgttcatggttaatatatttttaattttaagaatattacaactacatagattaaatttaaagaattcatgtaaaccctccaaa 1132960  T
Q  279 accttacttctatataatttttgag 303  Q
    ||| | || | ||| ||||||||||    
T  1132961 accctcctccaatacaatttttgag 1132985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36796579 - 36796511
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  36796579 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagatt 36796511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 2927993 - 2927930
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||  ||||||||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  2927993 tgataaactaatgtttatgattaatatatttttaattttaagaatattataacaacatatatta 2927930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 19148316 - 19148253
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  19148316 tgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacataaatta 19148253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 49304361 - 49304298
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag 249  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||  || |||||||| |||||||    
T  49304361 agaatgataaattaatgtttatgattaatatatttttaattttatgaatattataataacatag 49304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 44979558 - 44979488
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    ||||| |||||||||||||| | || |||| ||| ||  |||||||||||||| |||||||||||||||||    
T  44979558 ttttgtagagaatgataaattattgcttatgattaatgaatttttaattttgaaagtattataacaacata 44979488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 54917920 - 54917854
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    ||||| ||| |||||| |||||||| |||| ||| ||||||||||||| ||||||||||||| ||||    
T  54917920 ttttgtagaaaatgattaatgaatgcttatgattaatatatttttaatattgagagtattattacaa 54917854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 105086 - 105167
Alignment:
Q  171 agagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||| ||||| |||||||||||||| |||  |||| ||| ||  |||||||| ||||| ||||||||| |||||||||||    
T  105086 agagtggttttgtagagaatgataaataaatacttatgattaatgcatttttaactttgaaagtattatagcaacatagatt 105167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 9112785 - 9112724
Alignment:
Q  189 atgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    ||||||||| |||||| || ||| |||||||||||||||| ||| ||||||| |||||||||    
T  9112785 atgataaattaatgttcataattaatatatttttaattttaagaatattataccaacataga 9112724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 32858985 - 32858916
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||  |||  ||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  32858985 agagaatgataaattaatacttacgattaatatatttttaattttaagaatattataactacatagatta 32858916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 46891541 - 46891472
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||  |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  46891541 agagactgataaattaatacttatgattaatatatttttaattttaagaatattataacaacatatatta 46891472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 48444660 - 48444591
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| ||||||||| ||| |||||||||||||||| | | ||||||||||| ||| ||||    
T  48444660 agagagtgataaatcaatgtttatgattaatatatttttaattttaaaaatattataacaatatatatta 48444591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 1133138 - 1133106
Alignment:
Q  72 ttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    |||||||||||||||||||||||||||||||||    
T  1133138 ttaaggctttgtttgcgagtttgtaggggaagg 1133106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 2420814 - 2420746
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  2420814 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 2420746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 17642744 - 17642676
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||| ||||    
T  17642744 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatggatt 17642676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 23163678 - 23163610
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  23163678 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 23163610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 25428823 - 25428755
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  25428823 agagaatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagatt 25428755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 32708880 - 32708820
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    |||||||||||||| ||||||||| ||  || ||||||||||||| ||| |||||||||||    
T  32708880 agagaatgataaattaatgtttatgatagatgtatttttaattttaagaatattataacaa 32708820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 35586174 - 35586218
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatattttt 222  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||    
T  35586174 ttttgtagagaatgataaatgaaagtttatcattaatatattttt 35586218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 41961903 - 41961971
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  41961903 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 41961971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 43007448 - 43007516
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  43007448 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 43007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 49860991 - 49860923
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  49860991 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 49860923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 54372504 - 54372568
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||||||||| || | |||| ||| ||||||||||||||||  || |||||||||||||||||    
T  54372504 agaatgataaattaacgcttataattaatatatttttaattttaggaatattataacaacataga 54372568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 9241580 - 9241643
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagat 251  Q
    |||||||||| |||  |||| ||| ||||||||||||| |||||| ||||||||||||| ||||    
T  9241580 aatgataaataaatacttatgattaatatatttttaatcttgagaatattataacaacaaagat 9241643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 21494800 - 21494863
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| |||| |||| ||| |||||||||| ||||| ||| ||||||||||||||| ||||    
T  21494800 tgataaattaatgcttatgattaatatatttttcattttaagaatattataacaacatatatta 21494863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 23420731 - 23420790
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaaca 246  Q
    |||||| |||| ||||||||| ||| ||||| |||||||||| ||| |||||||||||||    
T  23420731 gaatgagaaattaatgtttataattaatatacttttaattttaagaatattataacaaca 23420790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 27681958 - 27681899
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||    
T  27681958 agagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataaca 27681899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 54089385 - 54089448
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagat 251  Q
    |||||||||| |||||| || ||| |||||||||||||||| | | ||||||||| ||||||||    
T  54089385 aatgataaattaatgttaatgattaatatatttttaattttaaaaatattataactacatagat 54089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 335
Target Start/End: Original strand, 33193417 - 33193447
Alignment:
Q  305 ggattttgtgttatgaagaaaaacaaacccc 335  Q
    |||||||||||||||||||||||||||||||    
T  33193417 ggattttgtgttatgaagaaaaacaaacccc 33193447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 52620764 - 52620830
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||| |||| |||| ||| |||||||||| ||||| | | ||||||||||||||| ||||    
T  52620764 gaatgataaatcaatgcttatgattaatatattttttattttaaaaatattataacaacatatatta 52620830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 7302239 - 7302170
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||  |||| ||| ||||||||||| |||| ||| ||||||||| | ||||||||    
T  7302239 agagaatgataaatcaatacttatgattaatatatttttagttttaagaatattataactatatagatta 7302170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 15499225 - 15499294
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||  |||| ||| ||||||||| |||||| ||| ||||||||| ||||||||||    
T  15499225 agagaatgataaaataatacttatgattaatatattttaaattttaagaatattataactacatagatta 15499294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 29623387 - 29623322
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||  |||| |||| ||||||||||||||||| || | | ||||||||||||||| ||||    
T  29623387 aatgataaactaatgcttatgattcatatatttttaatattaaaaatattataacaacatatatta 29623322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 32720992 - 32721076
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||  ||||| ||||| |||||||| |||| |||| ||| |||||||||||||||| | | |||||| |||||||| ||||    
T  32720992 gaaagagtatttttgtagagagtgataaattaatgcttatgattaatatatttttaatttt-aaaatattattacaacatatatta 32721076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 37545333 - 37545264
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||| |||||||||  |||||||| |||||| ||| | ||||| ||||||| ||||    
T  37545333 agagaatgataaattaatttttatcattattatattttaaattttaagaattttatagcaacatatatta 37545264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 3334019 - 3333960
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    |||||||||||||| ||||||||| ||| ||| ||||| |||||| ||| |||||||||||    
T  3334019 agagaatgataaattaatgtttatgattaata-attttcaattttaagaatattataacaa 3333960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 30121448 - 30121516
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||| ||||||||||||    
T  30121448 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattattacaacatagatt 30121516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 30131812 - 30131880
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| ||||||||||| |||||||    
T  30131812 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaagatagatt 30131880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 30697526 - 30697482
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaatttt 228  Q
    |||||||||||||  ||||||||| ||| ||||||||||||||||    
T  30697526 agagaatgataaactaatgtttatgattaatatatttttaatttt 30697482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 35283213 - 35283173
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  35283213 atatatttttaattttaagaatattataacaacatatatta 35283173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 37674064 - 37674148
Alignment:
Q  169 aaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| ||||  |||||||||||| | ||||  ||| |||  | ||||||||||||| | | ||||||||||||||||||||    
T  37674064 aaagagtggttttttagagaatgataatttaatgcatatgattactttatttttaattttaaaaatattataacaacatagatta 37674148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 39499333 - 39499285
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  39499333 ttatgattaatatacttttaattttaagaatattataacaacatagatt 39499285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 40674233 - 40674193
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  40674233 atatatttttaattttaagaatattataacaacatatatta 40674193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 42178788 - 42178856
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||||| ||||||| | | | |||||||||| ||||| | | ||||||||||| ||||||||    
T  42178788 gagaatgataaattaatgtttgtgaatgatatattttttattttaaaaatattataacaatatagatta 42178856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 43237445 - 43237377
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||| | |||||||||| ||| |||||||||||||||||||    
T  43237445 agagaatgataaactaatacttatgattaataaacttttaattttaagaatattataacaacatagatt 43237377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 44400583 - 44400619
Alignment:
Q  68 ttccttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    |||| |||||||||||||||||||||| |||||||||    
T  44400583 ttccctaaggctttgtttgcgagtttggaggggaagg 44400619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 44412081 - 44412149
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||  ||| ||||| |||||||||| | | |||||||||||||||||||    
T  44412081 agagaatgataaattaatacttacgattaatatacttttaattttaaaaatattataacaacatagatt 44412149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 46312346 - 46312414
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| | | ||||||| |||||||||||    
T  46312346 agagaatgataaactaatatttatgattaatatacttttaattttaaaaatattatagcaacatagatt 46312414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 47714619 - 47714667
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  47714619 ttatgattaatatacttttaattttaagaatattataacaacatagatt 47714667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 47789392 - 47789440
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  47789392 ttatgattaatatacttttaattttaagaatattataacaacatagatt 47789440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 55439719 - 55439671
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  55439719 ttatgattaatatacttttaattttaagaatattataacaacatagatt 55439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 38216438 - 38216564
Alignment:
Q  179 tttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag-----attacaagaatttatctaaaccct 273  Q
    |||| ||||||||||| |||||||||||| ||| |||||||||||||||| |||||||||||| |||||||     |||  ||||| |||||||||||||    
T  38216438 tttgtagagaatgatagatgaatgtttatgattaatatatttttaatttttagagtattataaaaacatagattgaatttgaagaaattatctaaaccct 38216537  T
Q  274 ccaaaaccttacttctatataattttt 300  Q
    |||||| | | ||||| ||||||||||    
T  38216538 ccaaaatcctccttctttataattttt 38216564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 13110497 - 13110423
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||| |||||||| ||| ||||    
T  13110497 ttttgcagagaatgataaataaatgtt-atcattaatatattttcaattttgagagtactataacaatatatatta 13110423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 16625730 - 16625799
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||| |||| ||||||||||||||||| || ||| ||||||||||||||||||||    
T  16625730 agagaatgataaaccaatgcttatgattcatatatttttaatattaagaatattataacaacatagatta 16625799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 11205048 - 11205148
Alignment:
Q  184 agagaatgataaatgaatgtttatcattca-tatatttttaattttgagagtattataaca-aca-tagattacaagaatttatctaaaccctccaaaac 280  Q
    |||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||| |||||| | | | ||||  ||||| ||||||||||||||||||||    
T  11205048 agagaatggtaaatgaatgtttatgattcaatatatttttcattttgagagtatgataacatagattggatttaaagaaattatctaaaccctccaaaac 11205147  T
Q  281 c 281  Q
    |    
T  11205148 c 11205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 13767572 - 13767505
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| | | |||||||||||||||||||    
T  13767572 agagaatgataaat-aatgtttatgattaatatatttttaattttaaaaatattataacaacatagatt 13767505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 14167109 - 14167042
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||| |||||||||  || |||||||||||||| | ||| ||||||||||||||||||||    
T  14167109 agaatgataaatcaatgtttatggttaatatatttttaattctaagaatattataacaacatagatta 14167042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 14385235 - 14385166
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||||||| |||  ||||||||||||||| | | ||||||||| ||||||||||    
T  14385235 agagaatgataaattaatgtttattattagtatatttttaattttaaaaatattataactacatagatta 14385166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 39670105 - 39670174
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||||||| ||  |||||||||||||||| ||| ||||| ||||||| ||||||    
T  39670105 agagaatgataaattaatgtttatgatcaatatatttttaattttaagaatattacaacaacacagatta 39670174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 8410856 - 8410924
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  8410856 agagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 8410924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 29880919 - 29880859
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    ||||||||||||| ||||| |||| ||| |||||||||||||||||| | |||||||||||    
T  29880919 agagaatgataaacgaatgcttatgattaatatatttttaattttgataatattataacaa 29880859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 39913425 - 39913365
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    ||||||||||| ||||||||| ||| |||||||||||||||| ||| ||||||||| ||||    
T  39913425 gaatgataaattaatgtttatgattaatatatttttaattttaagaatattataactacat 39913365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 3022850 - 3022795
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattat 239  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| ||| ||||||    
T  3022850 agagaatgataaattaatgtttatgattaatatatttttaattttaagaatattat 3022795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 5193218 - 5193151
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||||||||||| ||| ||||||||| |||||| ||| | ||||||||||||| ||||    
T  5193218 agaataataaatgaatgtttatgattaatatattttaaatttttagaattttataacaacataaatta 5193151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 11522112 - 11522175
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| ||||||||  ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  11522112 tgataaattaatgtttaagattaatatatttttaattttaagaatattataacaacatatatta 11522175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 14196455 - 14196378
Alignment:
Q  171 agagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||| |||| |||||||||||||| ||||||| || ||| ||||| |||||||||   ||||||||||||||||||||||    
T  14196455 agagtgtttttacagagaatgataaaagaatgtt-atgattaatataattttaattt---gagtattataacaacatagatt 14196378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 42946656 - 42946719
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||| || |||||||||||| ||||    
T  42946656 tgataaattaatgtttatgattaatatatttttaattttaagaatagtataacaacatatatta 42946719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 44656682 - 44656745
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| ||| ||||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  44656682 tgataaattaatttttatgattaatatatttttaattttaagaatattataacaacatatatta 44656745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 36030948 - 36030882
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||| ||| ||||| || ||||||||    
T  36030948 agagaatgataaattaatgcttatgattaatatatttttaattttaagaatattacaaaaacataga 36030882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 31809556 - 31809491
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| ||||||||  ||| |||||||||| ||||| | | ||||||||||||||||||||    
T  31809556 aatgataaattaatgtttaagattaatatattttttattttaaaaatattataacaacatagatta 31809491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 38325259 - 38325194
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag 249  Q
    |||||||||||||| |||| |||| ||||||||||||||||| || | | ||||||||| ||||||    
T  38325259 agagaatgataaattaatgattatgattcatatatttttaatattaataatattataaccacatag 38325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 4042119 - 4042051
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  4042119 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 4042051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 8555702 - 8555770
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| ||||||||||| |||||||    
T  8555702 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagatt 8555770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 13765865 - 13765933
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  13765865 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 13765933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36567204 - 36567272
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  36567204 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 36567272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 38294043 - 38293975
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  38294043 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 38293975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 39205172 - 39205072
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta-----caagaatttatctaaaccctccaaa 278  Q
    ||||| |||||||| ||||| ||| |||  ||||||||||||||| | | || |||||||||||||||||     |||||||| || |||||||||||||    
T  39205172 agagagtgataaattaatgtatatgattactatatttttaattttaaaaataatataacaacatagattaaatttcaagaattcatataaaccctccaaa 39205073  T
Q  279 a 279  Q
    |    
T  39205072 a 39205072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 40357612 - 40357544
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  40357612 agagaatgataaactaatacttatgattaatataattttaattttaagaatattataacaacatagatt 40357544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 44020494 - 44020426
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  44020494 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 44020426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 16519016 - 16519079
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||| |||||  |||| |||| ||||||||||||||||| || ||| |||||||||||||||    
T  16519016 gagaatcataaactaatgcttatgattcatatatttttaatattaagaatattataacaacata 16519079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 26434445 - 26434496
Alignment:
Q  197 tgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    ||||| ||||| ||| |||||||||||| ||||| |||||||||||||||||    
T  26434445 tgaatatttatgattaatatatttttaactttgaaagtattataacaacata 26434496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 27987837 - 27987755
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||| ||||| ||||| |||||||| |||| |||| |||   |||||||||||||| ||| ||||||| ||||||| ||||    
T  27987837 gaaagagtgtttttgtagagagtgataaattaatgcttatgatt---atatttttaattttaagaatattatatcaacatatatta 27987755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 28074370 - 28074288
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||| ||||| ||||| |||||||| |||| |||| |||   |||||||||||||| ||| ||||||| ||||||| ||||    
T  28074370 gaaagagtgtttttgtagagagtgataaattaatgcttatgatt---atatttttaattttaagaatattatatcaacatatatta 28074288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 4666290 - 4666221
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| ||||||||| |||||| ||| ||||||||||| ||| ||||    
T  4666290 agagagtgataaattaatgcttatgattaatatattttaaattttaagaatattataacaagatatatta 4666221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 21626280 - 21626211
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  | ||||||||||||| | | ||||||||||||||||||||    
T  21626280 agagaatgataaattaatgcatatgattattttatttttaattttaaaaatattataacaacatagatta 21626211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 25463674 - 25463731
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    ||||||||||| ||| ||||| ||| ||||| ||||||||||  ||||||||||||||    
T  25463674 gaatgataaataaatatttatgattaatataattttaatttttcgagtattataacaa 25463731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 43190507 - 43190544
Alignment:
Q  216 tatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  43190507 tatttttaattttaagaatattataacaacatagatta 43190544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 3038893 - 3038941
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  3038893 ttatgattaatatacttttaattttaagaatattataacaacatagatt 3038941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 3119798 - 3119846
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  3119798 ttatgattaatatacttttaattttaagaatattataacaacatagatt 3119846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 5322319 - 5322287
Alignment:
Q  73 taaggctttgtttgcgagtttgtaggggaaggt 105  Q
    |||||||||||||||||||||| ||||||||||    
T  5322319 taaggctttgtttgcgagtttggaggggaaggt 5322287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 8990909 - 8990957
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  8990909 ttatgattaatatacttttaattttaagaatattataacaacatagatt 8990957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 11950124 - 11950084
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||| |||| ||| ||||||||||||||||||||    
T  11950124 atatatttttatttttaagaatattataacaacatagatta 11950084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 14008255 - 14008323
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||| ||||| ||| |||||||||||||||||||    
T  14008255 agagaatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagatt 14008323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 18780539 - 18780471
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||| ||||||  ||| ||||| ||| ||||| |||||||||| | | |||||||||||||||||||    
T  18780539 agagaacgataaactaatatttatgattaatatacttttaattttaataatattataacaacatagatt 18780471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 22333949 - 22333981
Alignment:
Q  72 ttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    |||||||||||||||||||||| ||||||||||    
T  22333949 ttaaggctttgtttgcgagtttttaggggaagg 22333981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 26427687 - 26427619
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| | | ||||| || ||||||||||    
T  26427687 agagaatgatatattaatgcttatgattaatatatttttaattttaaaaatattaaaataacatagatt 26427619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 31550188 - 31550256
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||| ||||||||||||    
T  31550188 agagaatgataaactaatagttatgattaatatacttttaattttaagaatattatgacaacatagatt 31550256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 38023373 - 38023441
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||| ||||    
T  38023373 agagaatgataaactaattcttatgattaatatacttttaattttaagaatattataacaacattgatt 38023441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 39194102 - 39194020
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    ||||||||| ||||  |||||||||||||  ||||||||| ||||||||||||||||| || ||| |||||||||||||||||    
T  39194102 gaaagagtgtttttttagagaatgataaactaatgtttatgattcatatatttttaatattaagaatattataacaacataga 39194020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Complemental strand, 31150069 - 31149991
Alignment:
Q  172 gagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    ||||| ||||| |||||||||||||   |||||||| ||||||||||||||||| || ||| |||||||||||||||||    
T  31150069 gagtgtttttgtagagaatgataaactgatgtttatgattcatatatttttaatattaagaatattataacaacataga 31149991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 43007853 - 43007784
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| || |||||| |||  | ||||||||||||||||| ||||||||||||||||||||    
T  43007853 agagaatgataaattaaggtttatgattactctatttttaattttgagaatattataacaacatagatta 43007784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 32533348 - 32533269
Alignment:
Q  171 agagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||| ||||| ||||||||| ||| ||||| | || ||| ||||| |||||||||||| |||||||||||||||||||    
T  32533348 agagtggttttgaagagaatgagaaaagaatgctcatgattaatatacttttaattttgaaagtattataacaacataga 32533269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 32502993 - 32502932
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattata 240  Q
    ||||| |||||||||||| | ||||||||| ||| ||||||||||||||||||||||||||||    
T  32502993 ttttgtagagaatgataa-taaatgtttattattaatatatttttaattttgagagtattata 32502932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 13258641 - 13258573
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||| |||  ||| |||||||||||||||| |||||||| ||| ||||||||||    
T  13258641 agagaatgataaattaatgcttacgattaatatatttttaattttaagagtattctaagaacatagatt 13258573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 2457830 - 2457869
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  2457830 atatattttcaattttgagagtattataacaacatagatt 2457869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 7079920 - 7079986
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| | | |||||||||||||||||    
T  7079920 agagagtgataaattaatgcttatgattaatatatttttaattttaaaaatattataacaacataga 7079986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11961451 - 11961516
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| |||  |||| ||| |||||||||||||||| ||||||||||||| ||||| ||||    
T  11961451 aatgataaattaatacttattattaatatatttttaattttcagagtattataactacataaatta 11961516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 13865022 - 13865087
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| |||  |||| ||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  13865022 aatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagatta 13865087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 32289 - 32237
Alignment:
Q  203 tttatcattcatatatttttaattttgagagtattataacaacatagattaca 255  Q
    ||||| ||| |||||||||||||||| ||| ||||||||||||||| ||||||    
T  32289 tttatgattaatatatttttaattttaagaatattataacaacataaattaca 32237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 3404500 - 3404568
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  3404500 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 3404568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 29612142 - 29612078
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||| |||  |||| ||| |||||||||||||||| | | |||||||||||||||||||    
T  29612142 aatgataaattaatacttatgattaatatatttttaattttaataatattataacaacatagatt 29612078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 33230973 - 33231041
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  33230973 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 33231041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 35353980 - 35353917
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||||||||| ||| ||||| ||| |||||||||||||||| ||| ||||||||||| |||||    
T  35353980 agaatgataaattaatatttatgattaatatatttttaatttt-agaatattataacaaaataga 35353917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 36102816 - 36102884
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  36102816 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 36102884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 40985000 - 40985044
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaatttt 228  Q
    |||||||||||||| ||||||||| ||| ||||||||||||||||    
T  40985000 agagaatgataaattaatgtttatgattaatatatttttaatttt 40985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 42438390 - 42438454
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||| ||||| ||| ||| |||||||||||||||| ||| | ||||||||| |||||||    
T  42438390 aatgataaattaatgtatataattaatatatttttaattttaagaatgttataacaaaatagatt 42438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 22330839 - 22330776
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| |||| |||| ||| |||||||||||||||| | | |||||| |||||||||||||    
T  22330839 tgataaattaatgcttataattaatatatttttaattttaaaaatattatcacaacatagatta 22330776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 43733075 - 43733114
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  43733075 atatatttttaattttaagaatattataacaacatagatt 43733114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 3394116 - 3394058
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataac 242  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||| | | |||||||||    
T  3394116 agagaatgataaattaatgtttatgattaatatattttttattttaaaaatattataac 3394058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 248
Target Start/End: Complemental strand, 13406576 - 13406518
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||| |||| |||| ||| |||||||||| ||||| ||| |||||||||||||||    
T  13406576 tgataaattaatgcttatgattaatatatttttgattttaagaatattataacaacata 13406518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 33896585 - 33896515
Alignment:
Q  173 agtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    |||| ||||| |||||||||||||| |||    || ||| |||||||||||||||||| ||||||||||||    
T  33896585 agtgattttgtagagaatgataaattaatacaaatgattaatatatttttaattttgaaagtattataaca 33896515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 252
Target Start/End: Complemental strand, 36906348 - 36906274
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||| ||||||||||||    
T  36906348 tttttcagagaatgataaactaatacttatgattaatatacttttaattttaagaatattatgacaacatagatt 36906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 8948780 - 8948711
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||| ||| ||||||||| ||| |||| |||||||||||  || ||||||||||||||| ||||    
T  8948780 agagagtgatcaattaatgtttatgattaatatgtttttaattttatgaatattataacaacatatatta 8948711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 11876940 - 11877009
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||  |||| ||| |||||||||||| ||| ||| ||||||||||||||| ||||    
T  11876940 agagagtgataaattaatacttatgattaatatatttttaagtttaagaatattataacaacatatatta 11877009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 11891947 - 11892016
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||  |||| ||| |||||||||||| ||| ||| ||||||||||||||| ||||    
T  11891947 agagagtgataaattaatacttatgattaatatatttttaagtttaagaatattataacaacatatatta 11892016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 13537497 - 13537440
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    ||||||| |||||| |||| |||| ||| |||||||||||||||| ||| ||||||||    
T  13537497 agagaataataaattaatgcttatgattaatatatttttaattttaagaatattataa 13537440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 13627045 - 13626988
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    ||||||| |||||| |||| |||| ||| |||||||||||||||| ||| ||||||||    
T  13627045 agagaataataaattaatgcttatgattaatatatttttaattttaagaatattataa 13626988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 27085503 - 27085434
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||  | | ||||||||||||||| ||||    
T  27085503 agagagtgataaattaatgcttatgattaatatatttttaatttaaaaaatattataacaacatatatta 27085434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 29584329 - 29584260
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  ||||||||||||||| | | || |||||||||||||||||    
T  29584329 agagaatgataaattaatgcatatgattactatatttttaattttaaaaataatataacaacatagatta 29584260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 41455394 - 41455345
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  41455394 ttatgattaatatatttttaattttaagaatattataacaacatatatta 41455345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 41866330 - 41866289
Alignment:
Q  70 ccttaaggctttgtttgcgagtttgtaggggaaggtaagaga 111  Q
    |||| |||||||||||||||||||| ||||||||||| ||||    
T  41866330 cctttaggctttgtttgcgagtttgaaggggaaggtaggaga 41866289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 1941999 - 1942047
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  1941999 ttatgattaatatacttttaattttaagaatattataacaacatagatt 1942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 5255153 - 5255197
Alignment:
Q  179 tttgcagagaatgataaatgaatgtttatcattcatatattttta 223  Q
    |||||||||||||||||||||||| |||| ||| ||| |||||||    
T  5255153 tttgcagagaatgataaatgaatgcttataattaatacattttta 5255197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 11742676 - 11742632
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaatttt 228  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||    
T  11742676 agagaatgataaattaatggttatcattattatatttttaatttt 11742632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 15108190 - 15108258
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| ||   |||| ||| ||||| || ||||||| ||| |||||||||||||||||||    
T  15108190 agagaatgataaattaacacttatgattaatatacttataattttaagaatattataacaacatagatt 15108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 32874894 - 32874838
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagt 234  Q
    ||||| ||| ||||| |||||||||||||| ||| ||||||||| |||||| |||||    
T  32874894 ttttgtagataatgaaaaatgaatgtttatgattaatatattttaaattttaagagt 32874838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 34272650 - 34272602
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  34272650 ttatgattaatatacttttaattttaagaatattataacaacatagatt 34272602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 34349870 - 34349806
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  34349870 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacata 34349806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 35856456 - 35856524
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||| | ||| ||||| ||  |||||||||||||| | ||| ||||||||||| |||||||    
T  35856456 agagaatgataagttaatatttatgatgaatatatttttaattataagaatattataacaatatagatt 35856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 37659457 - 37659525
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||| ||||||||||    
T  37659457 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagatt 37659525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 39418222 - 39418147
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcatt--catatatttttaattttgagagtattataa 241  Q
    ||||| ||| ||||| || ||||||||||||||||||||| |||   |||||||||| ||||||| | ||||||||    
T  39418222 gaaagggtgtttttgtagggaatgataaatgaatgtttatgattaatatatattttttattttgaaaatattataa 39418147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 32123628 - 32123558
Alignment:
Q  173 agtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    |||| ||||| | |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  32123628 agtgtttttgtaaagaatgataaatgaatgtttatcattaatatattgttaattttgagaatattataaca 32123558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 43530209 - 43530293
Alignment:
Q  169 aaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| ||||  ||||| |||||||| |||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||    
T  43530209 aaagagtgtttttttagagagtgataaattaatgcttatgattaatatatttttaattttaagagtattataacaacatatatta 43530293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 24436858 - 24436927
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| ||||||| | ||| |||||||||||||||| | ||||||||||||||||||||||    
T  24436858 agagagtgataaattaatgtttttgattaatatatttttaattttaaaagtattataacaacatagatta 24436927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 34552014 - 34552083
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| |||||||||| ||||| ||| ||||||||||||||||||||    
T  34552014 agagagtgataaatcaatgcttatgattaatatattttttattttaagaatattataacaacatagatta 34552083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 35619440 - 35619509
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| ||||||||| ||| ||||| |||||||||| ||| ||||||||||||||| ||||    
T  35619440 agagagtgataaattaatgtttatgattaatatacttttaattttaagaatattataacaacatatatta 35619509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 2175489 - 2175421
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  2175489 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagatt 2175421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 14153266 - 14153198
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  14153266 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagatt 14153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 50476679 - 50476615
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||  |||| |||| ||| |||||||||||||||| ||| |||||||||||||||||||    
T  50476679 aatgataaactaatgcttattattgatatatttttaattttaagaatattataacaacatagatt 50476615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 51572365 - 51572325
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  51572365 atatatttttaattttgagagtattatagcaacatagatta 51572325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 52073384 - 52073452
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| || |||||| ||| |||||||||||||||| ||| ||||||||| || ||||||    
T  52073384 agagaatgataaattaacgtttatgattaatatatttttaattttaagaatattataactacttagatt 52073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 19652223 - 19652290
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| ||| ||||||||||| ||||||||    
T  19652223 agaatgatatattaatgcttattattaatatatttttaattttaagaatattataacaaaatagatta 19652290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 40243500 - 40243449
Alignment:
Q  202 gtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||| ||| |||||||||||||||| ||| ||||||||||||||||||||    
T  40243500 gtttatgattaatatatttttaattttaagaatattataacaacatagatta 40243449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 43036243 - 43036318
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||| |||||| |||||||| ||   |||| ||| |||||||||||||||| ||| ||||||||||||||||||||    
T  43036243 tttttcagagagtgataaattaagacttatgattaatatatttttaattttaagaatattataacaacatagatta 43036318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 41432688 - 41432757
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||| |||||| |||  |||| ||| |||||||||||||||| ||| ||||||||| ||||||||||    
T  41432688 agagaataataaattaatacttatgattaatatatttttaattttaagaatattataactacatagatta 41432757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 1278623 - 1278563
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaac 245  Q
    ||||||||||||| |||| |||| ||| |||||||||||||||| ||| || |||||||||    
T  1278623 gagaatgataaattaatgcttatgattaatatatttttaattttaagaatactataacaac 1278563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 10618978 - 10618918
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    ||||| ||||||||||||| |||| ||| ||||||||||||||||  || |||||||||||    
T  10618978 agagagtgataaatgaatgcttatgattaatatatttttaattttaggaatattataacaa 10618918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 17675351 - 17675283
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| ||||||||| |||||||||    
T  17675351 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataaccacatagatt 17675283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 23871389 - 23871457
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  23871389 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 23871457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 33991696 - 33991628
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  33991696 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 33991628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 36269898 - 36269830
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||| |||| ||| |||| ||||| ||||| ||| ||||||| |||||||||||    
T  36269898 agagaatgataaattaatgcttatgattgatatgttttttattttaagaatattatagcaacatagatt 36269830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 36668579 - 36668643
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||  |||| |||| ||| |||||||||||||||| ||| ||||||||||| |||||||    
T  36668579 aatgataaactaatgcttatgattaatatatttttaattttaagaatattataacaatatagatt 36668643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 42161979 - 42162047
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| | | |||||||||||||||||||    
T  42161979 agagaatgataaactaatatttatgattaatatacttttaattttaaaaatattataacaacatagatt 42162047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 48865584 - 48865520
Alignment:
Q  171 agagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagta 235  Q
    |||||| ||||| ||||||| ||||||||||| |||| |||  ||||||||| ||||||||||||    
T  48865584 agagtgtttttgtagagaataataaatgaatgcttatgattactatatttttcattttgagagta 48865520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 2492981 - 2493020
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  2492981 atatatttttaattttaagaatattataacaacatagatt 2493020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 36269346 - 36269418
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||| ||||||||| ||||||||| |||| ||| ||||||||||||| ||  |||| ||||||||||| |||||    
T  36269346 ttttgtagagaatgaaaaatgaatgcttatgattaatatatttttaatgtt--gagtgttataacaacacagatt 36269418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 49547147 - 49547096
Alignment:
Q  173 agtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaa 224  Q
    |||| ||||| ||| |||||||||||||||||||||||| ||||| ||||||    
T  49547147 agtgtttttgtagataatgataaatgaatgtttatcattaatatacttttaa 49547096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 50402895 - 50402828
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||||||  |||  |||| ||| |||||||||||||||| | | |||||||||||||||||||    
T  50402895 gagaatgataaactaatacttatgattaatatatttttaattttaaaaatattataacaacatagatt 50402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 1523748 - 1523682
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  1523748 agaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 1523682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Complemental strand, 5584778 - 5584744
Alignment:
Q  70 ccttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    ||||||||||||||||||||||||| |||||||||    
T  5584778 ccttaaggctttgtttgcgagtttggaggggaagg 5584744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 5970367 - 5970433
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||||||||||  ||||||||| ||| |||| |||||||| || ||| ||||||||||| |||||    
T  5970367 agagaatgataaactaatgtttatgattgatatgtttttaatattaagaatattataacaatataga 5970433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 17416644 - 17416702
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataac 242  Q
    ||||| |||||||| ||||||||| ||| |||||||||||||| | ||| |||||||||    
T  17416644 agagattgataaattaatgtttatgattaatatatttttaattataagactattataac 17416702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 30543289 - 30543391
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta-----caagaatttatctaaaccctccaaa 278  Q
    |||||||||||||| |||  |||| ||| |||||||||||||||| ||| ||| ||||| | ||||||||      ||||||| || |||||||||||||    
T  30543289 agagaatgataaattaatacttatgattaatatatttttaattttaagaatatcataactatatagattaaatttgaagaattcatgtaaaccctccaaa 30543388  T
Q  279 acc 281  Q
    |||    
T  30543389 acc 30543391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 2925881 - 2925930
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||| ||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  2925881 ttatgattaatatacttttaattttaagaatattataacaacatagatta 2925930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 17760411 - 17760480
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  | ||||||||||||| | | ||||||||||||||||||||    
T  17760411 agagaatgataaattaatgcatatgattactttatttttaattttaaaaatattataacaacatagatta 17760480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 27500136 - 27500071
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  27500136 gaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 27500071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 33579408 - 33579351
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    |||||||||||||| |||| |||| | | |||||||||||||||| ||| ||||||||    
T  33579408 agagaatgataaattaatgcttatgactaatatatttttaattttaagaatattataa 33579351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 40136144 - 40136193
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattt 227  Q
    ||||| |||||||||||||| ||||||||| ||| ||| |||||||||||    
T  40136144 ttttgtagagaatgataaattaatgtttatgattaatagatttttaattt 40136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 42806325 - 42806256
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||  |||| ||| |||||||||| ||||| | | ||||||||||||||||||||    
T  42806325 agagagtgataaattaatacttatgattgatatattttttattttaaaaatattataacaacatagatta 42806256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 50162271 - 50162222
Alignment:
Q  203 tttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||| ||| |||||||||||||||| ||| ||||||||| |||||||||    
T  50162271 tttatgattaatatatttttaattttaagaatattataactacatagatt 50162222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 51303101 - 51303166
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag 249  Q
    |||||||||||||| |||| |||| ||| |||||||||| || || ||| ||||||||| ||||||    
T  51303101 agagaatgataaattaatgcttatgattaatatattttttatgttaagaatattataaccacatag 51303166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 896441 - 896489
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  896441 ttataattaatatacttttaattttaagaatattataacaacatagatt 896489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 6538084 - 6538044
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  6538084 atatatttttaattttaagaatattataacaacatatatta 6538044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 6538142 - 6538098
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaatttt 228  Q
    ||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  6538142 agagagtgataaatcaatgtttataattaatatatttttaatttt 6538098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 7964109 - 7964061
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  7964109 ttatgattaatatacttttaattttaagaatattataacaacatagatt 7964061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 8156291 - 8156331
Alignment:
Q  212 catatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||| |||||||||| ||| |||||||||||||||||||    
T  8156291 catatacttttaattttaagaatattataacaacatagatt 8156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 9595686 - 9595650
Alignment:
Q  216 tatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  9595686 tatttttaactttgaaagtattataacaacatagatt 9595650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 11017756 - 11017692
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  11017756 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacata 11017692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 12293967 - 12293903
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  12293967 agagaatgataaactaatacttattattaatatacttttaattttaagaatattataacaacata 12293903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 13061343 - 13061391
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  13061343 ttatgattaatatacttttaattttaagaatattataacaacatagatt 13061391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 13255499 - 13255431
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||| ||||| ||| |||||||||||||||||||    
T  13255499 agagaatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagatt 13255431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 32299237 - 32299189
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  32299237 ttatgattaatatacttttaattttaagaatattataacaacatagatt 32299189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 32300190 - 32300142
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  32300190 ttatgattaatatacttttaattttaagaatattataacaacatagatt 32300142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 36477830 - 36477894
Alignment:
Q  185 gagaatgataaat-gaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||| |||| |||||||||| ||  |||||||||||||||||| |||| ||||| ||||||    
T  36477830 gagaatgaaaaatagaatgtttatgatcgatatatttttaattttgaaagtactataataacata 36477894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 37649830 - 37649798
Alignment:
Q  70 ccttaaggctttgtttgcgagtttgtaggggaa 102  Q
    ||||||||||||||||||||||||| |||||||    
T  37649830 ccttaaggctttgtttgcgagtttggaggggaa 37649798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 38857939 - 38857999
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    |||||||||||||  |||| | || ||||||||||||||||| || ||| |||||||||||    
T  38857939 agagaatgataaactaatgataatgattcatatatttttaatattaagaatattataacaa 38857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 39889584 - 39889652
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| ||||||||||  || |||||||||||||||||||    
T  39889584 agagaatgataaactaatacttatgattaatatacttttaattttatgaatattataacaacatagatt 39889652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 41432982 - 41432942
Alignment:
Q  73 taaggctttgtttgcgagtttgtaggggaaggtaagagagg 113  Q
    |||||||||||||||||||||| ||||||||| ||| ||||    
T  41432982 taaggctttgtttgcgagtttggaggggaagggaagggagg 41432942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 42488553 - 42488621
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||| ||||| ||| |||||||||||||||||||    
T  42488553 agagaatgataaactaatacttatgattaatatacttttgattttaagaatattataacaacatagatt 42488621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 43571911 - 43571959
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  43571911 ttatgattaatatacttttaattttaagaatattataacaacatagatt 43571959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 45752164 - 45752232
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||| |||||||| |||| || | ||| ||||||||||||||||| || | ||||||||||||| ||||    
T  45752164 gagagtgataaattaatgcttctgattaatatatttttaattttgggaattttataacaacatatatta 45752232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 47206370 - 47206418
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  47206370 ttatgattaatatacttttaattttaagaatattataacaacatagatt 47206418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 47905615 - 47905683
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  | || ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  47905615 agagaatgataaactaatactaatgattaatatacttttaattttaagaatattataacaacatagatt 47905683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 50097769 - 50097705
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    ||||| |||||||| | ||||||| ||| |||||||||||||||| ||| |||| ||| ||||||    
T  50097769 agagagtgataaattattgtttatgattaatatatttttaattttaagaatattttaaaaacata 50097705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 28154845 - 28154777
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| ||||||||| ||| |||||||||| ||||| ||| |||||||||||||||||||    
T  28154845 agagaatgataaattaatgtttatgattaatatattttttattttaagaatattataacaacatagatt 28154777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 37909146 - 37909078
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||||| ||||||||||||||| |||||||    
T  37909146 agagaatgataaattaatgtttataattgataaatttttaattttaagagtattataacaatatagatt 37909078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 1474942 - 1475011
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||||||||||||||| || | ||||||| ||||| || ||||||||||||||||||| ||||    
T  1474942 agagaatgataaatgaatgtttaccactaatatattgttaatgttaagagtattataacaacatatatta 1475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 5696492 - 5696574
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| |||| ||||| |||||||||||||  ||||||||| ||| ||||||||  |||||||| |||||||||||||||||||||    
T  5696492 gaaatagtgattttgtagagaatgataaactaatgtttatgattaatatattt--aattttgaaagtattataacaacatagatt 5696574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 1176441 - 1176368
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||||||||||||| |||||  || ||||||||||||| ||  |||||||||||||||||||||||    
T  1176441 ttttgtagagaatgataaatgaatttttatgcttaatatatttttaatatt--gagtattataacaacatagatta 1176368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 2021135 - 2021067
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  2021135 agagaatgataaattaatatttatgattaatatacttttaattttaagaatattataacaacatagatt 2021067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 6491339 - 6491275
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||| ||| |||||||||||||||    
T  6491339 agagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacata 6491275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 32824803 - 32824735
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||| |||||| ||||||||| ||| |||||||||||||||| ||| |||||||||| ||||||||    
T  32824803 agagaataataaattaatgtttatgattaatatatttttaattttaagaatattataacagcatagatt 32824735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 279
Target Start/End: Original strand, 13839475 - 13839585
Alignment:
Q  173 agtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaaca-----tagattacaagaatttatcta 267  Q
    |||| ||||| |||||||||||||||||| ||||| ||| |||| |||| | ||||||||||||||||||||||     | ||||  ||||| |||||||    
T  13839475 agtggttttgtagagaatgataaatgaatatttatgattaatat-ttttaatttttgagagtattataacaacacggatttgatttgaagaagttatcta 13839573  T
Q  268 aaccctccaaaa 279  Q
    ||||||||||||    
T  13839574 aaccctccaaaa 13839585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 31633005 - 31632883
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata-----gattacaagaattt 262  Q
    ||||||||  ||||| ||||||||||||||||||| || | ||| ||||||||||||||||||    ||||||||||||||     ||||  ||||||||    
T  31633005 gaaagagtatttttgtagagaatgataaatgaatgcttctgattaatatatttttaattttga---cattataacaacatagattggatttgaagaattt 31632909  T
Q  263 atctaaaccctccaaaaccttacttc 288  Q
    || ||| |||||||||||||| ||||    
T  31632908 atttaagccctccaaaaccttccttc 31632883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 1175856 - 1175918
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttga 230  Q
    ||||| ||| ||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  1175856 gaaagggtgtttttgtagagaatgataaatgaatgtttatgattaatatatttttaatattga 1175918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 2163992 - 2164065
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagat 251  Q
    ||||| |||||||||||||| | |  |||||||| |  ||||||||||||||| ||||||||||||||||||||    
T  2163992 ttttgtagagaatgataaattagtacttatcattaaagtatttttaattttgaaagtattataacaacatagat 2164065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 6044688 - 6044619
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||  |||||||||||||||||||||| || ||| ||||||||||||||| ||||    
T  6044688 agagaatgataaactaatacttatcattcatatatttttaatattaagaatattataacaacataaatta 6044619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 19389754 - 19389823
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||| | | ||||||||| ||||||||||    
T  19389754 agagaatgataaattaatgcttatgattaatatatttttaattttaaaaatattataactacatagatta 19389823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 25779650 - 25779581
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||| ||||| |||  ||||||||||||||| ||| ||||||||||||||| ||||    
T  25779650 agagaatgataaattaatatttataattattatatttttaattttaagaatattataacaacatatatta 25779581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 26018896 - 26018827
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  26018896 agagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacatatatta 26018827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 35704980 - 35705041
Alignment:
Q  192 ataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||||||||||||    
T  35704980 ataaattaatgcttatgattaatatatttttaattttaagaatattataacaacatagatta 35705041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 25027077 - 25027009
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||||||| ||||| |||||||||| ||| |||||||||||||||||||    
T  25027077 agagaatgataaactaatacttatcattaatatacttttaattttaagaatattataacaacatagatt 25027009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 26149758 - 26149690
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  26149758 agagaatgataaactaatatttatgattgatatacttttaattttaagaatattataacaacatagatt 26149690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 1935039 - 1935102
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  1935039 tgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacatatatta 1935102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 248
Target Start/End: Original strand, 4841641 - 4841699
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||| |||| |||| ||| |||||||||||||||| ||| |||||||||||||||    
T  4841641 tgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacata 4841699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 29709664 - 29709606
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    ||||||||||||| ||||||||| ||| |||||||||| ||||| ||| ||||||||||    
T  29709664 gagaatgataaattaatgtttatgattaatatattttttattttaagaatattataaca 29709606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 247
Target Start/End: Complemental strand, 43265318 - 43265264
Alignment:
Q  193 taaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    |||||||||||||||| || ||||||||||| |||| ||| ||||||||||||||    
T  43265318 taaatgaatgtttatcgttaatatatttttagtttttagattattataacaacat 43265264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 5088800 - 5088865
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| ||||||||| ||  |||||||||||||||| ||| ||||||||| ||||| ||||    
T  5088800 aatgataaattaatgtttatgataaatatatttttaattttaagaatattataactacataaatta 5088865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 9096466 - 9096409
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    |||||||||||||| ||||||| | ||| |||||||||||||||| ||| ||||||||    
T  9096466 agagaatgataaattaatgtttttgattaatatatttttaattttaagaatattataa 9096409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 9684721 - 9684786
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||| || |||||||    
T  9684721 aatgataaattaatgcttatgattaatatatttttaattttaagaatattataactacttagatta 9684786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 11168394 - 11168326
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||| || |||||||||| ||   |||||| |||||||| |||||||||||| ||||||||||    
T  11168394 agagaatgatgaacgaatgtttatgatcagtatattattaattttaagagtattataataacatagatt 11168326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 33718336 - 33718268
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| |||||||||||||||| ||| |||||||||||| ||||||    
T  33718336 agagaatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacgtagatt 33718268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 27489894 - 27489824
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgaga--gtattataacaacatagatt 252  Q
    |||||||||||||||||| ||||| ||| ||||||||| |||||||| |   ||||||||| |||||||||    
T  27489894 agagaatgataaatgaatatttatgattaatatattttaaattttgaaaatatattataactacatagatt 27489824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 17668063 - 17668129
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||| |||| ||||  || ||||||||| |||||| ||| ||||||||| ||||||||||    
T  17668063 gaatgataaattaatgcttatgcttaatatattttcaattttaagaatattataactacatagatta 17668129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 25626534 - 25626596
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    ||||||||||||||  || |||||  |||||||||||| ||||| |||| |||||||||||||    
T  25626534 aatgataaatgaatacttctcattagtatatttttaatcttgagcgtatgataacaacataga 25626596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 2679816 - 2679881
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| ||||  ||| |||  ||||||||||||||| | | ||||||||||||||||||||    
T  2679816 aatgataaattaatgcatatgattactatatttttaattttaaaaatattataacaacatagatta 2679881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 3081258 - 3081327
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| ||||||||  ||| |||| ||| |||||||||||||||| ||| |||||||| |||||| ||||    
T  3081258 agagagtgataaattgatgcttatgattaatatatttttaattttaagaatattataagaacatatatta 3081327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 4764780 - 4764821
Alignment:
Q  199 aatgtttatcattcatatatttttaattttgagagtattata 240  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||    
T  4764780 aatgtttatgattaatatattcttaattttgagagtattata 4764821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 7147546 - 7147493
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    |||||||||| ||||||||| ||| | |||||||||||||| ||| ||||||||    
T  7147546 aatgataaattaatgtttatgattaaaatatttttaattttaagaatattataa 7147493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 13293910 - 13293979
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||  |||| ||| |||||||||| ||||| | | ||||||||||||| ||||||    
T  13293910 agagaatgataaattaatacttatgattaatatattttttattttaaaaatattataacaacagagatta 13293979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 15399970 - 15399901
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| || || ||| ||||| ||| |||||||||||||||| | | ||||||||||||| ||||||    
T  15399970 agagaatgctagattaatttttatgattaatatatttttaattttaaaaatattataacaacaaagatta 15399901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 28523771 - 28523730
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattt 227  Q
    |||||||||||| ||||||||| ||| |||||||||||||||    
T  28523771 agaatgataaattaatgtttatgattaatatatttttaattt 28523730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 38289469 - 38289400
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatattttt-aattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||||||||  |||  ||||||||| |||||| ||| |||||||||||||||||||    
T  38289469 agagaatgataaactaatgtttaaaattactatattttttaattttaagaatattataacaacatagatt 38289400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1658332 - 1658264
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||| ||||||||||    
T  1658332 agagaatgataaactaatacttataattaatatacttttaattttaagaatattataataacatagatt 1658264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 4648913 - 4648981
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| || ||||||||||||||||    
T  4648913 agagaatgataaactaatacttatgattaatatacttttaattttaagaatactataacaacatagatt 4648981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 15770191 - 15770127
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||| |||| ||||  ||  ||||| ||||||||| ||| |||||||||||||||||||    
T  15770191 aatgataaattaatgcttatgtttattatatctttaattttaagaatattataacaacatagatt 15770127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 17093032 - 17092984
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  17093032 ttatgattaatatacttttaattttaagaatattataacaacatagatt 17092984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 22114860 - 22114816
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaatttt 228  Q
    |||||||||||||| | |||| || ||||||||||||||||||||    
T  22114860 agagaatgataaatcagtgttaatgattcatatatttttaatttt 22114816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 27480098 - 27480166
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||   ||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  27480098 agagaatgataaactaatacatatgattaatatacttttaattttaagaatattataacaacatagatt 27480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 35683685 - 35683653
Alignment:
Q  72 ttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    ||||||||||||||||||||||| |||||||||    
T  35683685 ttaaggctttgtttgcgagtttgaaggggaagg 35683653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 35701558 - 35701490
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| ||| |||||| ||| |||||||||||||||||||    
T  35701558 agagaatgataaactaatacttatgattaatatactttaaattttaagaatattataacaacatagatt 35701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 38302284 - 38302352
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||| ||||||||||    
T  38302284 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagatt 38302352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 41695132 - 41695064
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||| ||| ||||| |||| ||||| | | |||||||||||||||||||    
T  41695132 agagaatgataaattaatacttatgattaatatacttttgattttaaaaatattataacaacatagatt 41695064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 49936657 - 49936589
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||| |||| ||| |||||||||||||||| ||| |||||||||||||||||||    
T  49936657 agagaatgataaattaatgcttatgattaatatatttttaattttaagaatattataacaacatagatt 49936589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 8827749 - 8827815
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||  ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||    
T  8827749 gaatgataaactaatgtttatgattcatatatttttaatattaagaatattataacaacatagatta 8827815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 28880146 - 28880077
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| ||||||||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  28880146 agagagtgataaattaatgtttatgattaatatatttttaattttaagaatattataacaacatatatta 28880077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 40422999 - 40423068
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| ||| ||||| ||| |||||||||||||||| ||| ||||||||||||||||||||    
T  40422999 agagagtgataaattaatatttatgattaatatatttttaattttaagaatattataacaacatagatta 40423068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 35959336 - 35959240
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagattacaagaatttatctaaaccctccaaaac 280  Q
    |||||||||||||  |||| |||| ||||||||||||||||| || ||| ||||||||||  ||| |||  |||||||||| ||||||| |||||||    
T  35959336 agagaatgataaagtaatgcttatgattcatatatttttaatattaagaatattataacagaataaatttgaagaatttatataaaccccccaaaac 35959240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 56118037 - 56117973
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||| |||| |||| |||||||||||||| ||||| ||| |||||||||||||||    
T  56118037 agagaatgataaatcaatgattatgattcatatattttttattttaagaatattataacaacata 56117973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 56439299 - 56439393
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaaca---tagattacaagaatttatctaaaccctcc 275  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||| | | |||||||| ||||   || |||  |||||||||||||||||||||    
T  56439299 agagaatgatagatgaatgttaatcattaatatatttttaatttttataatattataataacagattatatttgaagaatttatctaaaccctcc 56439393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 32648930 - 32648999
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||  |||| ||| |||||||||||||||| ||| ||||||||||||||||||||    
T  32648930 agagaatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagatta 32648999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 46669871 - 46669940
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  46669871 agagaatgataaatttatgcttatgattaatatatttttaattttaagaatattataacaacatatatta 46669940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 31530174 - 31530106
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  31530174 agagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 31530106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 32060801 - 32060733
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  32060801 agagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 32060733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 252
Target Start/End: Original strand, 32485916 - 32485996
Alignment:
Q  172 gagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||| |||||  |||||||||||||||||| |  | |||  ||||||||||||||| |||||||||||||| ||||||||    
T  32485916 gagtggttttgttgagaatgataaatgaatgctcgtgattagtatatttttaattttaagagtattataacatcatagatt 32485996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 42649979 - 42649909
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttg--agagtattataacaacatagatt 252  Q
    ||||||||||||||||||| | || ||| | |||||||||||||||  |||||||||||||||| ||||||    
T  42649979 agagaatgataaatgaatgctcatgattaacatatttttaattttgagagagtattataacaacttagatt 42649909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 6836552 - 6836486
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||| |||| |||| ||| |||||||||||||||| ||| | ||||||||| ||||||||    
T  6836552 gaatgataaattaatgcttatgattaatatatttttaattttaagaattttataacaagatagatta 6836486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 34713102 - 34713049
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaa 244  Q
    |||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||    
T  34713102 tgataaatgaatgtttatgattaatatatttttaa-tttgagaatattataacaa 34713049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Complemental strand, 47047456 - 47047394
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||| ||||||||| ||| |||||||||||||||| | | ||||| |||||||||    
T  47047456 agaatgataaattaatgtttatgattgatatatttttaattttaaaaatattacaacaacata 47047394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 51431099 - 51431037
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaaca 246  Q
    |||||||||||||  ||| ||||| ||| |||||||||||||||| ||| |||||||||||||    
T  51431099 agagaatgataaagtaatatttatgattaatatatttttaattttaagaatattataacaaca 51431037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 53013742 - 53013684
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataac 242  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| | | |||||||||    
T  53013742 agagaatgataaattaatgtttatgattaatatatttttaattttaacaatattataac 53013684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 56439420 - 56439458
Alignment:
Q  297 ttttgaggggattttgtgttatgaagaaaaacaaacccc 335  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  56439420 ttttgaggggattttgtgttatgaagaaaaataaacccc 56439458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 8828136 - 8828205
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||||||| ||| |||||||||| | ||| | | ||||||||||||| ||||||    
T  8828136 agagaatgataaattaatgtttatgattaatatattttttaatttaaaaatattataacaacaaagatta 8828205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 16535846 - 16535777
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||  |||| ||| |||| ||||||||||| ||| ||||||||||||||||||||    
T  16535846 agagaatgataaactaatacttataattaatatctttttaattttaagaatattataacaacatagatta 16535777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 27143333 - 27143264
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||| ||| ||||    
T  27143333 agagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataacaatatatatta 27143264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 31428956 - 31428887
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||| ||||||| || ||||||  || |||||||| ||||||| ||| ||||||||||||||||||||    
T  31428956 agagaaagataaattaacgtttatggttaatatatttataattttaagaatattataacaacatagatta 31428887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 52594552 - 52594621
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  52594552 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatta 52594621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7182117 - 7182185
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  7182117 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 7182185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 21730253 - 21730321
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| |||||||||||||||  ||| |||||||||||||||||||    
T  21730253 agagaatgataaactaatacttatgattaatatatttttaatttcaagaatattataacaacatagatt 21730321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 37756649 - 37756717
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  37756649 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 37756717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 38317154 - 38317222
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  38317154 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 38317222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 41495568 - 41495624
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataac 242  Q
    ||||||||| || ||||||||| ||| |||||||||||||||| ||| |||||||||    
T  41495568 agaatgatagattaatgtttatgattaatatatttttaattttaagaatattataac 41495624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 41844590 - 41844522
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||| ||| ||||| |||||||||| ||| ||||||||||| |||||||    
T  41844590 agagaatgataaattaatacttatgattaatatacttttaattttaagaatattataacaagatagatt 41844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 47669965 - 47669897
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  47669965 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 47669897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 6434911 - 6434860
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    |||||||||||||| ||||| | |||||||||||| ||||||||| ||||||    
T  6434911 tgataaatgaatgtgtatcaataatatatttttaagtttgagagtgttataa 6434860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 7360814 - 7360873
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    ||||||| ||||| ||| |||||| |||  |||||||||||| |||||||||||||||||    
T  7360814 agagaataataaaggaacgtttatgattattatatttttaatcttgagagtattataaca 7360873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 46176672 - 46176597
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||||||||| | |  |||| ||| || ||||||||| ||||| ||||||||||||| ||||||||    
T  46176672 ttttgtagagaatgataaataagtacttatgattaatgtatttttaactttgaaagtattataacaatatagatta 46176597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 48620438 - 48620375
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||  ||| |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  48620438 tgataaattcatgcttatgattaatatatttttaattttaagaatattataacaacatatatta 48620375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 54135758 - 54135797
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaat 225  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  54135758 agaatgataaattaatgtttataattcatatatttttaat 54135797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 41363740 - 41363806
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  41363740 agaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 41363806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 43104175 - 43104241
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||||||||||| ||   || | ||| ||||||||||| |||| |||||||||||||||||||||    
T  43104175 agagaatgataaattaaaacttgtaattaatatatttttagttttaagagtattataacaacataga 43104241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 368212 - 368143
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  ||||||||||||||| | | ||||||||||||||| ||||    
T  368212 agagaatgataaattaatgcatatgattactatatttttaattttaaaaatattataacaacataaatta 368143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 27485193 - 27485246
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataa 241  Q
    ||||||||||||||| |||| ||| ||||||||||||||||  || ||||||||    
T  27485193 aatgataaatgaatgcttatgattaatatatttttaattttatgaatattataa 27485246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 42650900 - 42650843
Alignment:
Q  70 ccttaaggctttgtttgcgagtttgtaggggaaggtaagagaggcctttgggtggtga 127  Q
    ||||||||||||||||| ||||||| ||||||||| |||  ||| ||||||| |||||    
T  42650900 ccttaaggctttgtttgtgagtttggaggggaagggaaggaagggctttggggggtga 42650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 42759578 - 42759646
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||| | || |||||| ||| |||||||||||||||| ||| ||||||||| || |||||||    
T  42759578 agagaatgataatt-aacgtttatgattaatatatttttaattttaagaatattataactacttagatta 42759646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 46176863 - 46176932
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||  |||| |||| ||||||||||||||||| || | | ||||||||| | ||||||||    
T  46176863 agagaatgataaactaatggttatgattcatatatttttaatattaaaaatattataaccaaatagatta 46176932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 47063837 - 47063768
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| ||||||||  ||| |||| ||| |||||||||||||||| ||| ||| ||||||||||| ||||    
T  47063837 agagagtgataaattgatgcttatgattaatatatttttaattttaagaatataataacaacatatatta 47063768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 2347885 - 2347801
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||| || ||||| ||||| |||||||| |||  ||||  || | || ||||||||||||||| ||||||||||| |||||||    
T  2347885 gaaagaatggttttgtagagattgataaattaatacttatatttaagatgtttttaattttgagaatattataacaatatagatt 2347801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 3126958 - 3127006
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  3126958 ttatgattaatatacttttaattttaagaatattataacaacatagatt 3127006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 8084989 - 8085025
Alignment:
Q  68 ttccttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    ||||||||||||||||||||||||||  |||||||||    
T  8084989 ttccttaaggctttgtttgcgagttttgaggggaagg 8085025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 11976967 - 11976923
Alignment:
Q  209 attcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||||||||| || ||| ||||||||||||||| ||||    
T  11976967 attcatatatttttaatattaagaatattataacaacatatatta 11976923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 13270088 - 13270040
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  13270088 ttatgattaatatacttttaattttaagaatattataacaacatagatt 13270040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 17873351 - 17873287
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  17873351 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacata 17873287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 18369844 - 18369788
Alignment:
Q  192 ataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||| ||||||||| ||| |||||||||||| ||| | |||||| ||||||||||    
T  18369844 ataaataaatgtttattattaatatatttttaactttaaaagtattgtaacaacata 18369788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 24291540 - 24291472
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| ||||||||||||| |||||    
T  24291540 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacaaagatt 24291472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 36593079 - 36593135
Alignment:
Q  192 ataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||| ||||||||| ||| |||||||||||| ||| | |||||| ||||||||||    
T  36593079 ataaataaatgtttattattaatatatttttaactttaaaagtattgtaacaacata 36593135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 38366182 - 38366114
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| |||||||||||||||| | | ||||||| |||||||||||    
T  38366182 agagaatgataaactaatacttatgattaatatatttttaattttaaaaatattatagcaacatagatt 38366114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 48830740 - 48830808
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||| ||||    
T  48830740 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacattgatt 48830808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 49404569 - 49404617
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  49404569 ttatgattaatatacttttaattttaagaatattataacaacatagatt 49404617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 56205250 - 56205286
Alignment:
Q  68 ttccttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    ||||||||||||||||||||||||||  |||||||||    
T  56205250 ttccttaaggctttgtttgcgagttttgaggggaagg 56205286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 33939049 - 33939115
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacataga 250  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| ||| ||||||||| |||||||    
T  33939049 agagaatgataaattaatgtttatgattaatatatttttaattttaagaatattataactacataga 33939115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 8439321 - 8439390
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| | | |||||||| |||||||||||    
T  8439321 agagaatgataaattaatgtttatgattaatatatttttaattttaacaatattataaaaacatagatta 8439390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 4465079 - 4465018
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    |||||||||||| ||||||||| ||| |||||||||||||||| | | ||||||||||||||    
T  4465079 agaatgataaattaatgtttatgattaatatatttttaattttaaaaatattataacaacat 4465018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 22817269 - 22817330
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    ||||||||||||||||| |||| ||| |||||||||||||||| ||| |||||||| |||||    
T  22817269 agaatgataaatgaatgcttatgattaatatatttttaattttaagaatattataataacat 22817330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 13120348 - 13120416
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| ||||  ||| ||| |||||||||||||||| | | |||||||||||||||||||    
T  13120348 agagaatgataaattaatgagtataattaatatatttttaattttaacaatattataacaacatagatt 13120416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 253
Target Start/End: Original strand, 20381799 - 20381861
Alignment:
Q  191 gataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  20381799 gataaattaatgattatgattgatatatttttaattttaagaatattataacaacatatatta 20381861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 303
Target Start/End: Complemental strand, 26714006 - 26713884
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag-----attacaagaatttatctaaaccctccaaaac 280  Q
    |||||||||||  |||| |||| ||||||||||||||||| || ||| || |||||||||||||     |||  ||||||| || |||||||||||||||    
T  26714006 agaatgataaactaatgcttatgattcatatatttttaatattaagaataatataacaacatagaataaatttgaagaattcatataaaccctccaaaac 26713907  T
Q  281 cttacttctatataatttttgag 303  Q
    | | || | ||| ||||||||||    
T  26713906 cctcctccaatacaatttttgag 26713884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 33677178 - 33677116
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaaca 246  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| ||| |||||||||||||    
T  33677178 agagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataacaaca 33677116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 2502292 - 2502361
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||| ||| ||||    
T  2502292 agagagtgataaattaatgcttatgattaatatatttttaattttaagaatattataacaatatatatta 2502361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 5825487 - 5825419
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  5825487 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 5825419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 19477426 - 19477342
Alignment:
Q  169 aaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||  |||| ||||||||||||||| ||||  ||| |||  ||||| ||||||||| | | ||||||||||||||||||||    
T  19477426 aaagagtaatttttcagagaatgataaattaatgcatatgattactatatatttaattttaaaaatattataacaacatagatta 19477342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 23095054 - 23095122
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  23095054 agagaatgataaaataatacttatgattaatatacttttaattttaagaatattataacaacatagatt 23095122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 24735035 - 24734967
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  24735035 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 24734967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26574321 - 26574389
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  26574321 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 26574389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 463241 - 463178
Alignment:
Q  169 aaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgaga 232  Q
    |||||||| ||||| |||||||||| | ||||||||||| ||| || |||||||||| ||||||    
T  463241 aaagagtgtttttgtagagaatgatgactgaatgtttattattaatgtatttttaatattgaga 463178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 26289712 - 26289637
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||||||||| ||||  ||| |||  ||||||||||||||| | | || |||||||||||||||||    
T  26289712 ttttgtagagaatgataaattaatgcatatgattactatatttttaattttaaaaataatataacaacatagatta 26289637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 33212455 - 33212412
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||    
T  33212455 ttatgattcatatatttttaattttaagaatattataacaacat 33212412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 104
Target Start/End: Original strand, 26713730 - 26713764
Alignment:
Q  70 ccttaaggctttgtttgcgagtttgtaggggaagg 104  Q
    ||||||||||||||||||||||||| |||||||||    
T  26713730 ccttaaggctttgtttgcgagtttggaggggaagg 26713764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 6855802 - 6855737
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||| ||||| ||| ||| |||||||||||||||| | | || |||||||| ||||||||    
T  6855802 aatgataaattaatgtatatgattaatatatttttaattttaaaaataatataacaatatagatta 6855737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 12779668 - 12779599
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  | ||||||||||||| | | ||||||||||||||||||||    
T  12779668 agagaatgataaattaatgcatatgattattttatttttaattttaaaaatattataacaacatagatta 12779599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 32222157 - 32222092
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag 249  Q
    |||||||||||||| ||||||||| |||  ||||||||| ||||| ||| | ||||| ||||||||    
T  32222157 agagaatgataaattaatgtttatgattactatattttttattttaagaatgttatagcaacatag 32222092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 33590255 - 33590324
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  ||||||||||||||| | | |||||||| |||||||||||    
T  33590255 agagaatgataaattaatgcatatgattactatatttttaattttaaaaatattataataacatagatta 33590324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1029448 - 1029380
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  || | ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  1029448 agagaatgataaactaatacttgtgattaatatacttttaattttaagaatattataacaacatagatt 1029380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 2523542 - 2523478
Alignment:
Q  189 atgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||| || ||||||||| ||| ||||||||||||||||  || ||||||| | ||||||||||    
T  2523542 atgatacatcaatgtttatgattaatatatttttaattttacgaatattataccgacatagatta 2523478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26481057 - 26481125
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||| ||||||    
T  26481057 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacgtagatt 26481125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 29241759 - 29241827
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||| ||||||||||    
T  29241759 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataagaacatagatt 29241827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 31345326 - 31345366
Alignment:
Q  213 atatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||||| ||| ||||||||||||||||||||    
T  31345326 atatacttttaattttaagaatattataacaacatagatta 31345366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 33054504 - 33054552
Alignment:
Q  203 tttatcattcatatatttttaattttgagagtattataacaacatagat 251  Q
    ||||| ||| |||||||||||||||| ||| |||||||| |||||||||    
T  33054504 tttatgattgatatatttttaattttaagaatattataataacatagat 33054552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 34914782 - 34914718
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  34914782 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacata 34914718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 13858488 - 13858416
Alignment:
Q  173 agtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaac 245  Q
    |||| ||||| ||| ||||||||||||||| |||| ||| |||| |||||||| |||||||||||||||||||    
T  13858488 agtgtttttgtagataatgataaatgaatgcttatgattaatatgtttttaatattgagagtattataacaac 13858416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 273
Target Start/End: Complemental strand, 46509420 - 46509327
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatattttt-aattttgagagtattataacaacatagattac---aagaatttatctaaaccct 273  Q
    |||||||||||||| |||||||||  || |||||||||| |||||| ||| |||||||||||||||||| ||   |||||||||| ||||||||    
T  46509420 agagaatgataaattaatgtttatggttaatatattttttaattttaagaatattataacaacatagataacttgaagaatttatgtaaaccct 46509327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 42266933 - 42267002
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||| ||||  ||  ||||||||||||||| ||| ||||||||||||||||||||    
T  42266933 agagaatgataaattaatgcttatgtttactatatttttaattttaagaatattataacaacatagatta 42267002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 28437468 - 28437536
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  28437468 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacatagatt 28437536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 42112869 - 42112948
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    ||||||||| ||||  |||||||||||||  |||| |||| ||||||||||||||||| || ||| |||| |||||||||    
T  42112869 gaaagagtgtttttttagagaatgataaactaatgcttatgattcatatatttttaatattaagaatattttaacaacat 42112948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 45510497 - 45510374
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta-----caagaatttatctaaaccctccaaa 278  Q
    |||||||||||||| ||||||||| ||| ||||||||| |||||| | | ||||||||| || |||||||      |||||||  |||||||||||||||    
T  45510497 agagaatgataaattaatgtttatgattaatatattttaaattttaaaaatattataactacttagattaaatttgaagaattcgtctaaaccctccaaa 45510398  T
Q  279 accttacttctatataatttttga 302  Q
    ||| |  | | |||||||||||||    
T  45510397 accctcatccaatataatttttga 45510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 31770300 - 31770246
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgaga 232  Q
    ||||| |||||||||||||| ||||||||| ||| |||||||| |||||||||||    
T  31770300 ttttgtagagaatgataaataaatgtttatgattaatatatttgtaattttgaga 31770246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 45066876 - 45066810
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||| ||| ||||| ||| | |||||||||||||| |||  ||||||||||||||||||    
T  45066876 agaatgataaattaatatttatgattaacatatttttaattttaagaacattataacaacatagatt 45066810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 4787929 - 4787998
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||| |||||||| |||| |||| ||| |||||||||||||||| | | ||||||||||||||| ||||    
T  4787929 agagagtgataaattaatgcttatgattaatatatttttaattttaaaaatattataacaacatatatta 4787998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 17818441 - 17818372
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||| ||| |||  ||||||||||||||| | | || |||||||||||||||||    
T  17818441 agagaatgataaattaatgtatataattactatatttttaattttaaaaatactataacaacatagatta 17818372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 24923304 - 24923373
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtatt 237  Q
    ||||||||| ||||  |||||||||||||| |||| |||| ||| |||||||||||||||| ||| ||||    
T  24923304 gaaagagtggttttttagagaatgataaattaatgattatgattaatatatttttaattttaagaatatt 24923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 31891430 - 31891362
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||| || ||||||||| | | |||||||||||| ||| ||| ||||||||||||||||||||    
T  31891430 agagaatgatagattaatgtttatgactaatatatttttaa-tttaagaatattataacaacatagatta 31891362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 36845367 - 36845436
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| ||||| |||  |||| |||  ||||||||||||||| ||| ||||||||||||||||||||    
T  36845367 agagaatgttaaattaatacttatgattactatatttttaattttaagaatattataacaacatagatta 36845436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 38138086 - 38138017
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||| |||| ||| ||| |||||||||||  | | ||||||||||||||||||||    
T  38138086 agagaatgataaattaatgcttatgattaatacatttttaatttcaaaaatattataacaacatagatta 38138017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 38991399 - 38991468
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| || |||||| ||| |||||||||| ||||| ||| |||||||| |||||| ||||    
T  38991399 agagaatgataaattaaagtttataattaatatattttttattttaagaatattataataacatatatta 38991468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 5967979 - 5968047
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  5967979 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 5968047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 7391308 - 7391372
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    ||||| |||||||| ||||||| |  || |||||||||||||||| ||| |||||||||||||||    
T  7391308 agagagtgataaattaatgtttgtggttaatatatttttaattttaagaatattataacaacata 7391372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 33810138 - 33810202
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  33810138 agagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaacata 33810202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 41002197 - 41002245
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| |||||||||||||||| ||| |||||||||||||||||||    
T  41002197 ttatgattaatatatttttaattttaagaatattataacaacatagatt 41002245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 42382741 - 42382781
Alignment:
Q  212 catatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  42382741 catatattttatattttgagagtattataacaacatagatt 42382781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 43665115 - 43665163
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| |||||||||||||||| ||| |||||||||||||||||||    
T  43665115 ttatgattaatatatttttaattttaagaatattataacaacatagatt 43665163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 46449327 - 46449259
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||| |||  |||| ||| ||||| |||||||||| ||| |||||||| ||||||||||    
T  46449327 agagaatgataaattaatacttataattaatatacttttaattttaagaatattataataacatagatt 46449259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 33187779 - 33187842
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||| |||| |||| ||| |||||||||||||||| ||| ||||||||||| ||| ||||    
T  33187779 tgataaattaatgcttatgattaatatatttttaattttaagaatattataacaatatatatta 33187842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 38233662 - 38233725
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    |||||||||||||  ||||||||| ||||||||||||||||| || | | |||||||| |||||    
T  38233662 agagaatgataaactaatgtttatgattcatatatttttaatattaaaaatattataataacat 38233725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 43778502 - 43778569
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||||||  ||| ||||| ||| ||||| |||||||||| ||| ||||||||||| |||||||    
T  43778502 gagaatgataaactaatatttatgattaatatacttttaattttaagaatattataacaatatagatt 43778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 45471863 - 45471898
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattat 239  Q
    |||||||| |||||||||||||||||||||||||||    
T  45471863 ttatcattaatatatttttaattttgagagtattat 45471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 14676382 - 14676316
Alignment:
Q  187 gaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||||| |||| ||||  || ||||||||| |||||| ||| ||||||||| ||||||||||    
T  14676382 gaatgataaattaatgcttatggttaatatattttcaattttaagaatattataactacatagatta 14676316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 33113559 - 33113629
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||| ||||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||    
T  33113559 tttttcagagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacata 33113629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 36907434 - 36907380
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataac 242  Q
    |||||||||| ||||||||| |||  ||||||||||||||| ||| |||||||||    
T  36907434 aatgataaattaatgtttatgattactatatttttaattttaagaatattataac 36907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 38505270 - 38505372
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta-----caagaatttatctaaaccctccaaa 278  Q
    |||||||||||||| ||||   || |||  ||||||||||||||| | | ||||||||||||||||||||      ||||||| || |||||||||||||    
T  38505270 agagaatgataaattaatgcagatgattactatatttttaattttaaaaatattataacaacatagattaaatttgaagaattcatataaaccctccaaa 38505369  T
Q  279 acc 281  Q
    |||    
T  38505370 acc 38505372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 250
Target Start/End: Original strand, 48049574 - 48049608
Alignment:
Q  216 tatttttaattttgagagtattataacaacataga 250  Q
    ||||||||||||||| |||||||||||||||||||    
T  48049574 tatttttaattttgaaagtattataacaacataga 48049608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 1278073 - 1278024
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||| ||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  1278073 ttatgattaatatatttttaattttaagaatattataacaacatatatta 1278024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 3363756 - 3363703
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    |||||||| ||| ||||| ||| |||||||||||||||| ||| ||||||||||    
T  3363756 tgataaattaatatttataattgatatatttttaattttaagaatattataaca 3363703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 6746513 - 6746570
Alignment:
Q  192 ataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatag 249  Q
    |||||| ||||||||| |||  ||||||||||||||| |||  |||||||||||||||    
T  6746513 ataaattaatgtttatgattactatatttttaattttaagatcattataacaacatag 6746570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 7181392 - 7181445
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgag 231  Q
    ||||| ||||||||||||| ||||| |||| ||| ||||||||||||| |||||    
T  7181392 ttttgtagagaatgataaaagaatgcttatgattaatatatttttaatgttgag 7181445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 17884123 - 17884184
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacat 247  Q
    |||||||||||| ||||||||| |||  |||| |||||||||| ||| |||||||| |||||    
T  17884123 agaatgataaattaatgtttataattactataattttaattttaagactattataataacat 17884184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 23465926 - 23465995
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| |||  |||| ||| |||||| ||||||||| ||| ||||||||| ||||| ||||    
T  23465926 agagaatgataaattaattcttatgattaatatatatttaattttaagaatattataactacataaatta 23465995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 38987542 - 38987489
Alignment:
Q  190 tgataaatgaatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    |||||||| ||||||||| ||| |||||||||||||||| | | ||||||||||    
T  38987542 tgataaattaatgtttatgattaatatatttttaattttaacaatattataaca 38987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 44643652 - 44643685
Alignment:
Q  70 ccttaaggctttgtttgcgagtttgtaggggaag 103  Q
    ||||||||||||||||||||||||| ||||||||    
T  44643652 ccttaaggctttgtttgcgagtttgaaggggaag 44643685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 374477 - 374521
Alignment:
Q  199 aatgtttatcattcatatatttttaattttgagagtattataaca 243  Q
    ||||||||| ||| |||||||||||||||| ||| ||||||||||    
T  374477 aatgtttatgattaatatatttttaattttaagaatattataaca 374521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 3658327 - 3658375
Alignment:
Q  73 taaggctttgtttgcgagtttgtaggggaaggtaagagaggcctttggg 121  Q
    |||||||||||||| ||||||| ||||||||| | |||||| |||||||    
T  3658327 taaggctttgtttgggagtttggaggggaaggaaggagagggctttggg 3658375  T

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Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 12884694 - 12884734
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaa 244  Q
    |||| ||| |||||||||| |||||||||||||||||||||    
T  12884694 ttatgattaatatattttttattttgagagtattataacaa 12884734  T

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Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 20513469 - 20513405
Alignment:
Q  178 ttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataac 242  Q
    ||||| |||||||||||||| |||  |||| ||| || ||||||||| ||||| |||||||||||    
T  20513469 ttttgtagagaatgataaataaatacttatgattaatgtatttttaactttgaaagtattataac 20513405  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 23620720 - 23620787
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||||||| |||||| ||| |||||||||||||||||||    
T  23620720 agagaatgataaactaatacttatgattaatatatttt-aattttaagaatattataacaacatagatt 23620787  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 33406578 - 33406626
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  33406578 ttatgattaatatacttttaattttaagaatattataacaacatagatt 33406626  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 35264819 - 35264887
Alignment:
Q  186 agaatgataaatgaatgtttatcattca-tatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||| ||||||| | ||| | ||||||||||||||| | | ||||||||||||||| ||||    
T  35264819 agaatgataaattaatgtttgtgatttactatatttttaattttaaaaatattataacaacataaatta 35264887  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 252
Target Start/End: Complemental strand, 40002485 - 40002421
Alignment:
Q  188 aatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    ||||||||||||| ||||||  || |||||||||||| ||||||| | ||| ||||| |||||||    
T  40002485 aatgataaatgaacgtttattgttaatatatttttaaatttgagaattttacaacaatatagatt 40002421  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 42620278 - 42620346
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| ||||||||||| |||||||    
T  42620278 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaatatagatt 42620346  T

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Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 43188992 - 43188944
Alignment:
Q  204 ttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  43188992 ttatgattaatatacttttaattttaagaatattataacaacatagatt 43188944  T

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Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 47275928 - 47275996
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||| ||||||||||    
T  47275928 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataataacatagatt 47275996  T

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Target: scaffold0927 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 2820 - 2905
Alignment:
Q  168 gaaagagtgcttttgcagagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    ||||||||| ||||  |||||||||||||  |||  |||| ||||||||||||||||| || ||| |||| |||||||||||||||    
T  2820 gaaagagtgttttttaagagaatgataaactaatacttatgattcatatatttttaatattaagaatattgtaacaacatagatta 2905  T

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Target: scaffold1763 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 530 - 594
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacata 248  Q
    |||||||| ||||| ||||||||| ||| |||||||||||||||| ||| ||||||||| |||||    
T  530 agagaatgttaaattaatgtttatgattaatatatttttaattttaagaatattataactacata 594  T

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Target: scaffold0717 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 1733 - 1665
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| |||||||||||||||| ||| |||||||||||||||||||    
T  1733 agagaatgataaactaatacttatgattaatatatttttaattttaagaatattataacaacatagatt 1665  T

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Target: scaffold1562 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 295 - 227
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  295 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 227  T

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Target: scaffold1158 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 2298 - 2366
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  2298 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 2366  T

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Target: scaffold0952 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 3596 - 3664
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  3596 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 3664  T

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Target: scaffold0636 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 8546 - 8478
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  8546 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 8478  T

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Target: scaffold0245 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 4300 - 4240
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaac 245  Q
    ||||||||||||| |||| |||| ||| |||||||||||||||| ||| || |||||||||    
T  4300 gagaatgataaattaatgcttatgattaatatatttttaattttaagaatactataacaac 4240  T

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Target: scaffold0229 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 4631 - 4571
Alignment:
Q  185 gagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaac 245  Q
    ||||||||||||| |||| |||| ||| |||||||||||||||| ||| || |||||||||    
T  4631 gagaatgataaattaatgcttatgattaatatatttttaattttaagaatactataacaac 4571  T

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Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 35381 - 35449
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatt 252  Q
    |||||||||||||  |||  |||| ||| ||||| |||||||||| ||| |||||||||||||||||||    
T  35381 agagaatgataaactaatacttatgattaatatacttttaattttaagaatattataacaacatagatt 35449  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 90813 - 90880
Alignment:
Q  186 agaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||| |||| |||| |||   |||||||||||||| | | ||||||||||||||||||||    
T  90813 agaatgataaattaatgcttatgattacaatatttttaattttaaaaatattataacaacatagatta 90880  T

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Target: scaffold0248 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 122 - 191
Alignment:
Q  184 agagaatgataaatgaatgtttatcattcatatatttttaattttgagagtattataacaacatagatta 253  Q
    |||||||||||||| ||||  ||| |||  | ||||||||||||| | | ||||||||||||||||||||    
T  122 agagaatgataaattaatgcatatgattactttatttttaattttaaaaatattataacaacatagatta 191  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 93707 - 93675
Alignment:
Q  73 taaggctttgtttgcgagtttgtaggggaaggt 105  Q
    |||||||||||||||||||||| ||||||||||    
T  93707 taaggctttgtttgcgagtttggaggggaaggt 93675  T

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