View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16751_low_70 (Length: 270)
Name: NF16751_low_70
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_low_70 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 40221422 - 40221661
Alignment:
| Q |
18 |
attcttgtttgtcatgtccacttgtgctgtgaatagagaatacactggtctatggtcagagaattttgactctcctctaacatacattttctgatttagt |
117 |
Q |
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| T |
40221422 |
attcttgtttgtcatgtccacttgtgctgtgaatagagaatacactggtctatggtcagagaattttgactctcctctaacatacattttctgatttagt |
40221521 |
T |
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| Q |
118 |
ccttctcctttccatagaattctatcacaccttcagcaaccaaaaaatattaattaaaagatatcaaattttaatagctttcgtaatgtgagttgaatca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40221522 |
ccttctcctttccatagaattctatcacaccttcagcaaccaaaaaatattaattaaaagatatcaaattttaatagctttcgtaatgtgagttgaatca |
40221621 |
T |
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| Q |
218 |
taaaaatcataccaagcaggagtgcgtcgtttttcctttg |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
40221622 |
taaaaatcataccaagcaggagtgcgtcgtttttcctttg |
40221661 |
T |
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