View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16751_low_84 (Length: 243)
Name: NF16751_low_84
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16751_low_84 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 31 - 243
Target Start/End: Complemental strand, 32550743 - 32550531
Alignment:
| Q |
31 |
tttggccctcttggtccaaaatagggaaagtgatgtggcgagtatctttatctgttagcttagcaatagtatatttctgtttggttcttctgtgagtaac |
130 |
Q |
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| T |
32550743 |
tttggccctcttggtccaaaatagggaaagtgatgtggcgagtatctttatctgttagcttagcaatagtatatttctgtttggttcttctgtgagtaac |
32550644 |
T |
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| Q |
131 |
atttactttcaatcccaagagtacctcctcgacaaatttcttatatttcctgaactcagccaaattgaaacctctaatatgatcatggaggaaatccaag |
230 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32550643 |
atttactttcaatcccaagagtacctcctcgacaaatttcttatatttcctgaactcagccaaattgaaacctctaatatgatcatggaggaaatccaag |
32550544 |
T |
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| Q |
231 |
actgacattttct |
243 |
Q |
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||||||||||||| |
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| T |
32550543 |
actgacattttct |
32550531 |
T |
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