View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16751_low_96 (Length: 219)

Name: NF16751_low_96
Description: NF16751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16751_low_96
NF16751_low_96
[»] chr4 (18 HSPs)
chr4 (23-178)||(24420264-24420419)
chr4 (23-178)||(24471207-24471356)
chr4 (23-172)||(24475913-24476063)
chr4 (23-164)||(24406305-24406452)
chr4 (23-96)||(24406481-24406554)
chr4 (23-115)||(24420423-24420515)
chr4 (23-115)||(24471111-24471203)
chr4 (26-115)||(24471018-24471107)
chr4 (23-115)||(24420519-24420611)
chr4 (23-115)||(24420807-24420899)
chr4 (23-115)||(24421095-24421187)
chr4 (23-111)||(24470488-24470576)
chr4 (29-105)||(24470686-24470762)
chr4 (53-108)||(24420622-24420677)
chr4 (57-115)||(24406558-24406616)
chr4 (77-115)||(24476731-24476769)
chr4 (23-111)||(24421243-24421331)
chr4 (23-99)||(24477074-24477150)
[»] scaffold0879 (2 HSPs)
scaffold0879 (23-115)||(4587-4679)
scaffold0879 (23-111)||(4443-4531)
[»] chr2 (5 HSPs)
chr2 (23-107)||(41900272-41900356)
chr2 (53-115)||(41899832-41899894)
chr2 (23-98)||(41900089-41900164)
chr2 (53-114)||(41900553-41900614)
chr2 (27-115)||(41900360-41900448)
[»] chr1 (7 HSPs)
chr1 (53-111)||(11879349-11879407)
chr1 (76-115)||(11905000-11905039)
chr1 (77-115)||(11881952-11881990)
chr1 (77-115)||(11891186-11891224)
chr1 (54-108)||(11902063-11902117)
chr1 (23-96)||(11879484-11879557)
chr1 (32-108)||(11879445-11879521)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 3e-78; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 23 - 178
Target Start/End: Complemental strand, 24420419 - 24420264
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctccatatcatc 122  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24420419 tatggctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctccatatcatc 24420320  T
Q  123 cctaccactacaactcacccccgcctcccatctattaagcttccggctattatttg 178  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24420319 cctacctctacaactcacccccgcctcccatctattaagcttccggctattatttg 24420264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 23 - 178
Target Start/End: Original strand, 24471207 - 24471356
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctccatatcatc 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||    
T  24471207 tatgtctataggtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctcc------accatctccatcacctcctccatatcatc 24471300  T
Q  123 cctaccactacaactcacccccgcctcccatctattaagcttccggctattatttg 178  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  24471301 cctacctctacagctcacccccgcctcccatctattaagcttccggctatcatttg 24471356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 24476063 - 24475913
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctccatatcatc 122  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |||||||| ||||| |||||||||| ||||||||||| ||||     
T  24476063 tatgtctataagtcaccgccacctcctaccccttcaccaccgcctccttgtatttagaagtctcctcctcccccatctccataacctcctccatctcatt 24475964  T
Q  123 cctaccactacaactcacccccgcctcccatctattaa-gcttccggctat 172  Q
    || | | |||||||||||||||||||||| |||||||| ||||||||||||    
T  24475963 ccgatctctacaactcacccccgcctcccgtctattaaggcttccggctat 24475913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 24406452 - 24406305
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctc------caccatctccatcacctcctccat 116  Q
    ||||||| ||||||||| |||||||||||||||||||| || ||||||||||| |||||| |||||||||      |||||||||| |||||||||||||    
T  24406452 tatgtctttaagtcaccaccacctccttcgccttcaccgccacctccttatatctacaagactccacctccacctccaccatctccttcacctcctccat 24406353  T
Q  117 atcatccctaccactacaactcacccccgcctcccatctattaagctt 164  Q
    |||||||||||| ||| |||| |||||| ||||||   ||||||||||    
T  24406352 atcatccctaccgctataactaacccccacctcccgcgtattaagctt 24406305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 24406554 - 24406481
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccacc 96  Q
    ||||||| ||||||||| |||||||||||||||||||| || ||||||||||| |||||| |||||||||||||    
T  24406554 tatgtctttaagtcaccaccacctccttcgccttcaccgccacctccttatatctacaagactccacctccacc 24406481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 24420515 - 24420423
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||| ||    ||||| |||||||||||||| ||||||||||||||||||    
T  24420515 tatgtctataagtcacctccacctccttcagcttcaccacctcctccatactactacaaatctccacctccaccttctccatcacctcctcca 24420423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 24471111 - 24471203
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||| |||||||||| |||||||||||  |||||||||| ||||| ||    ||||| |||||||||||||| ||||||||||||||||||    
T  24471111 tatgtccataagtcacctccacctccttcagcttcaccacctcctccatactactacaaatctccacctccaccttctccatcacctcctcca 24471203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 24471018 - 24471107
Alignment:
Q  26 gtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    ||||||||||| || || |||||||| |||||||| || ||||| ||| ||||||| ||||| || ||||||||||| ||||||||||||    
T  24471018 gtctataagtcccctcctcctccttctccttcaccccctcctccatatgtttacaaatctcctcccccaccatctccttcacctcctcca 24471107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 24420611 - 24420519
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||||||||||| || || |||||||| |||||||| || ||||| ||| ||||||| ||||| || ||||||||||| ||||| ||||||    
T  24420611 tatgtctataagtcccctcctcctccttctccttcaccccctcctccatatgtttacaaatctcctcccccaccatctccttcaccccctcca 24420519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 24420899 - 24420807
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    ||||| ||||||||||| ||||||||||| ||||| || || ||||| ||| |||||||||| ||||| |||||||| || || |||||||||    
T  24420899 tatgtatataagtcaccaccacctccttccccttcccctcctcctccatatgtttacaagtccccacccccaccatcaccttctcctcctcca 24420807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 24421187 - 24421095
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||||| |||||||| ||||| || || || || ||||| ||||| |||||||||||||| ||||| |||||||| |||||||| ||||||    
T  24421187 tatgtctacaagtcaccaccaccaccatccccatctccaccacctccatatatttacaagtccccaccaccaccatccccatcaccccctcca 24421095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 24470488 - 24470576
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcc 111  Q
    ||||| || |||||||| ||||||||||| |||||||| || ||||| ||| | |||||||| |||||||| |||||||| ||||||||    
T  24470488 tatgtttacaagtcaccaccacctccttccccttcacctcctcctccatatgtctacaagtcaccacctcctccatctccttcacctcc 24470576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 24470686 - 24470762
Alignment:
Q  29 tataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatc 105  Q
    |||||||| || |||||||| || |||||||| || ||||| ||| | |||||||| |||||||||||||| |||||    
T  24470686 tataagtcgccaccacctccatctccttcacctcctcctccatatgtctacaagtcaccacctccaccatccccatc 24470762  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 24420677 - 24420622
Alignment:
Q  53 ccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacc 108  Q
    ||||||||||||||||| ||||| |||||||| ||||| |||||||| || |||||    
T  24420677 ccttcaccaccgcctccatatatctacaagtcaccaccaccaccatccccttcacc 24420622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 24406616 - 24406558
Alignment:
Q  57 caccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    ||||||| || || ||| ||||||| |||||||| ||||||||||| ||||||||||||    
T  24406616 caccaccaccaccgtatgtttacaaatctccacccccaccatctccttcacctcctcca 24406558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 24476769 - 24476731
Alignment:
Q  77 tacaagtctccacctccaccatctccatcacctcctcca 115  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  24476769 tacaaatctccacctccaccttctccatcacctcctcca 24476731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 24421331 - 24421243
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcc 111  Q
    ||||||||||||   || ||||| || || || |||||||| ||||| ||| | ||||||||||| ||||||||||| || ||||||||    
T  24421331 tatgtctataagagtccaccaccaccctctccatcaccaccacctccatatgtctacaagtctcctcctccaccatcaccctcacctcc 24421243  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 24477150 - 24477074
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatc 99  Q
    |||||||||||| |||| || ||||| || || || ||||| ||||| ||| ||||||| |||||||| ||||||||    
T  24477150 tatgtctataaggcaccacctcctccatctccatccccaccacctccatatgtttacaaatctccacccccaccatc 24477074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0879
Description:

Target: scaffold0879; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 4587 - 4679
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||||| |||||||| ||||| || || || || ||||| ||||| |||||||||||||| ||||| |||||||| |||||||| ||||||    
T  4587 tatgtctacaagtcaccaccaccaccatccccatctccaccacctccatatatttacaagtccccaccaccaccatccccatcaccccctcca 4679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 4443 - 4531
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcc 111  Q
    ||||||||||||   || ||||| || || || |||||||| ||||| ||| | ||||||||||| ||||||||||| || ||||||||    
T  4443 tatgtctataagagtccaccaccaccctctccatcaccaccacctccatatgtctacaagtctcctcctccaccatcaccctcacctcc 4531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000005; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 41900356 - 41900272
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcac 107  Q
    |||||||| || || || |||||||| || ||||||||||| ||||| ||| | ||||||||||| |||||||||||| ||||||    
T  41900356 tatgtctacaaatctcctccacctccctctccttcaccaccacctccatatgtctacaagtctcctcctccaccatctgcatcac 41900272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 41899894 - 41899832
Alignment:
Q  53 ccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||||| || ||||| ||| |||||||||||||||||||||| ||| | ||||||||||||    
T  41899894 ccttcaccgcctcctccatatgtttacaagtctccacctccaccttcttcttcacctcctcca 41899832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 41900164 - 41900089
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccat 98  Q
    |||||||| || || || |||||||| || ||||||||||||||||| ||| ||||||| ||||| || |||||||    
T  41900164 tatgtctacaaatctcctccacctccctctccttcaccaccgcctccatatgtttacaaatctcctccaccaccat 41900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 41900614 - 41900553
Alignment:
Q  53 ccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcc 114  Q
    ||||||||||| || ||||||||||| ||||| ||||| || || ||||| |||||||||||    
T  41900614 ccttcaccacctccaccttatatttataagtcaccaccacctccctctccttcacctcctcc 41900553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 41900448 - 41900360
Alignment:
Q  27 tctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||| ||||| || ||||| || || || |||||||| || ||||||||||||||||| ||||| || || ||||| |||| |||||||    
T  41900448 tctacaagtccccaccaccaccatccccatcaccacctccaccttatatttacaagtcaccaccacctccttctccttcacttcctcca 41900360  T

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Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 111
Target Start/End: Original strand, 11879349 - 11879407
Alignment:
Q  53 ccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacctcc 111  Q
    ||||||||||| ||||||||| ||||||| || |||||||| ||||| |||||||||||    
T  11879349 ccttcaccaccacctccttatgtttacaaatcgccacctcctccatccccatcacctcc 11879407  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 11905000 - 11905039
Alignment:
Q  76 ttacaagtctccacctccaccatctccatcacctcctcca 115  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  11905000 ttacaagtcaccacctccaccatctccatctcctcctcca 11905039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 11881952 - 11881990
Alignment:
Q  77 tacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  11881952 tacaagtcaccacccccaccatctccatcacctcctcca 11881990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 11891186 - 11891224
Alignment:
Q  77 tacaagtctccacctccaccatctccatcacctcctcca 115  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  11891186 tacaagtcaccacccccaccatctccatcacctcctcca 11891224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 11902063 - 11902117
Alignment:
Q  54 cttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacc 108  Q
    |||||||||| ||||||||| | |||||||| ||||| ||||||||||| |||||    
T  11902063 cttcaccaccacctccttatgtatacaagtcaccaccaccaccatctccttcacc 11902117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 11879484 - 11879557
Alignment:
Q  23 tatgtctataagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccacc 96  Q
    ||||| || |||||||| ||||| || || ||||||||||| ||||||||| | |||||||| ||||| |||||    
T  11879484 tatgtgtacaagtcaccaccaccgccatctccttcaccaccacctccttatgtgtacaagtcaccaccaccacc 11879557  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 11879445 - 11879521
Alignment:
Q  32 aagtcaccgccacctccttcgccttcaccaccgcctccttatatttacaagtctccacctccaccatctccatcacc 108  Q
    |||||||| ||||| ||  | ||||||||||| ||||||||| | |||||||| ||||| || |||||||| |||||    
T  11879445 aagtcaccaccaccaccaactccttcaccaccacctccttatgtgtacaagtcaccaccaccgccatctccttcacc 11879521  T

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