View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16753_high_5 (Length: 378)
Name: NF16753_high_5
Description: NF16753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16753_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 16 - 294
Target Start/End: Original strand, 25614264 - 25614542
Alignment:
| Q |
16 |
acctaaggaaagtgacaaagttgttttaacgtgtatacatgaattattggtttgaattaacgttgaaacttgaaatattactacaagtagcaggatcacg |
115 |
Q |
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| T |
25614264 |
acctaaggaaagtgacaaagttgttttaacgtgtatacatgaattattggtttgaattaacgttgaaacttgaaatattactacaagtagcaggatcacg |
25614363 |
T |
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| Q |
116 |
taaccaataatttctatttttgtgcatagctttcatgcaacctatatgaccattttgagtagtgtggcagtgtcaatgattcttaattatttctgccaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25614364 |
taaccaataatttctatttttgtgcatagctttcatgcaacctatatgaccattttgagtagtgtggcagtgtcaatgattcttaattatttctgccaca |
25614463 |
T |
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| Q |
216 |
agtggtccttccatctttgattttatcatttgctatttacttgtctttttgctcgatctttattactttagtggccaag |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
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| T |
25614464 |
agtggtccttccatctttgattttatcatttgctatttacttgcctttttgctcgatctttattgctttagtggccaag |
25614542 |
T |
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