View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16754_high_20 (Length: 409)
Name: NF16754_high_20
Description: NF16754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16754_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 2312605 - 2312900
Alignment:
| Q |
1 |
caaaatcaaagacatcaaattcaacagccttagtattactaaatacaagaaatgttgaaggttaccaatcaattgatgacatgctcaatactaaaaaatc |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2312605 |
caaaatcaaagacatcaaattcaacagcattagtattactaaatacaagaaatgttgaaggttaccaatcaattgatgacatgctcaatactaaaaaatc |
2312704 |
T |
|
| Q |
101 |
aaagggtccttgggggaataaactttcctttttgcatgtaccaataccaaaattgaatgagaacagaatttcaaaccctctagaatttatttatgataca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2312705 |
aaagggtccttgggggaataaactttcctttttgcatgtaccaataccaaaattgaatgagaacagaatttcaaaccctctagaatttatttatgataca |
2312804 |
T |
|
| Q |
201 |
cataacataatcaataggaaaaaacaatccttagctgtggctcttacagggacacttttggacattgaaggcaagctcagaggacaagaggttaga |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2312805 |
cataacataatcaataggaaaaaacaatccttagctgtggctcttacagggacacttttggacattgaaggcaaactcagaggacaagaggttaga |
2312900 |
T |
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