View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16754_high_54 (Length: 235)
Name: NF16754_high_54
Description: NF16754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16754_high_54 |
 | |
|
| [»] chr6 (45 HSPs) |
| |
|
| [»] chr1 (4 HSPs) |
| |
|
| [»] chr8 (1 HSPs) |
| |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| |
|
| [»] scaffold0038 (3 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 45)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 31285549 - 31285315
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285549 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
31285450 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
31285449 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccgtcaaattgatcaccaataaaatt |
31285350 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285349 |
atagattgctcttgcaagtgttgatttacccaagc |
31285315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26624261 - 26624027
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| | |
|
|
| T |
26624261 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattgaaattccctcactaacatggtccaacttaatttccaatccagttgttttaa |
26624162 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||| || |
|
|
| T |
26624161 |
aaaggagcttctcttggagatgtttcaagttattttgagctgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaagtt |
26624062 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26624061 |
atagattgctcttgcaagtgttgatttgcccaagc |
26624027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26730238 - 26730004
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| | |
|
|
| T |
26730238 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattgaaattccctcactaacatggtccaacttaatttccaatccagttgttttaa |
26730139 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||| ||| ||| || |
|
|
| T |
26730138 |
aaaggagcttctcttggagatgtttcaagttattttgagctgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaagtt |
26730039 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26730038 |
atagattgctcttgcaagtgttgatttgcccaagc |
26730004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27697778 - 27698012
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||||| | |
|
|
| T |
27697778 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccgtcactaacatggtctaaattaatttccgatccagttgttttaa |
27697877 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||| ||| ||||| |
|
|
| T |
27697878 |
aaaggagcttctcttggagatgttccaagttatttttagctgaattcattctcacattatgaagaaaacataaaccttcaaattgatcagcaaccaaatt |
27697977 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27697978 |
atagattgctcttgcaagtgttgattttcccaagc |
27698012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26803436 - 26803202
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||||||| || |||||||| ||||||| |||||| |||||||| |||| ||||||| ||||||| | |
|
|
| T |
26803436 |
tcgagaatcaaaagaatcttatttctacacagtctttcctttataattggaatcccctcacaaacatgatctaacttgattttcaatccagttgttttta |
26803337 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||| |
|
|
| T |
26803336 |
gaagaagcttctcttggagatgtttcaagttattttgagctgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaaatt |
26803237 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |
|
|
| T |
26803236 |
atagattgctcttgcaagtgctgatttacccaagc |
26803202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27705596 - 27705830
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||| |||||| |||||||| |||| | ||||| ||||||| | |
|
|
| T |
27705596 |
tcgagaatcaaaagaatcttctttctacacagcctttcctttatgaatggaatcccctcacaaacatgatctaactttattttcgatccagttgttttta |
27705695 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||| |
|
|
| T |
27705696 |
gaagaagcttctcttggagatgtttcaagtcattttgagctgaattctctctcacatcatgaagaaaacataaaccttcaaattgatcagcaacaaaatt |
27705795 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |
|
|
| T |
27705796 |
ataaattgctcttgcaagtgttgatttacccaagc |
27705830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 27679940 - 27679708
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| | |
|
|
| T |
27679940 |
tcgagaatcaaaagaatcttctttctacataatctttcctttatgactggaattccctcactaacatggtctaacttaatttccaaacctgttgttttta |
27679841 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | || || |||||||| ||| |||||| |
|
|
| T |
27679840 |
aaaggagcttctcttggagatatttcaagttattttgagctgaattctctctcacatcatgaagaaaacatgaaccttcgaattgatctgcaacaaaatt |
27679741 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| |
|
|
| T |
27679740 |
atagatttgtcttgcaagtgttgatttccccaa |
27679708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26647469 - 26647237
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||||| | || | || |||||| |
|
|
| T |
26647469 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcacaaatatgtccaaacttaatgttcactttaactgtttttg |
26647370 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| || |||||||||||||||||||| | ||||||||||||||| |||| ||||||||| |||| || |||||||||||| ||| |||||| |
|
|
| T |
26647369 |
aaaggagctccttctggagatgtttcaagttattatgagctgaattctctctgacattatgaagaaagcatacaccttcaaattgatcagcaacaaaatt |
26647270 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
||| || ||| | |||||||||||||||||||| |
|
|
| T |
26647269 |
ataaatcgctttggcaagtgttgatttacccaa |
26647237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 26753437 - 26753205
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||||| | || | || |||||| |
|
|
| T |
26753437 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcacaaatatgtccaaacttaatgttcactttaactgtttttg |
26753338 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| || |||||||||||||||||||| | ||||||||||||||| |||| ||||||||| |||| || |||||||||||| ||| |||||| |
|
|
| T |
26753337 |
aaaggagctccttctggagatgtttcaagttattatgagctgaattctctctgacattatgaagaaagcatacaccttcaaattgatcagcaacaaaatt |
26753238 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
||| || ||| | |||||||||||||||||||| |
|
|
| T |
26753237 |
ataaatcgctttggcaagtgttgatttacccaa |
26753205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 27530496 - 27530722
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||| ||||||| || |||||| |||| |
|
|
| T |
27530496 |
agaatcaaaagaatcttctttctacatagcctttgcttaatgattggaattccctgactaacacctcctaacttaatgtccaatctaactgtttttaaaa |
27530595 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||| ||||||||||||||||||||||||| | || |||||| ||||||||| | ||||||||||| | |||||||||||| ||| |||||||| |
|
|
| T |
27530596 |
ggagtttctcttggagatgtttcaagttatctgaagtcgaattcactctcacattttctagaaaacataaaacttcaaattgatcagcaatgaaattata |
27530695 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
27530696 |
aattgcttttgcaagtgttgatttacc |
27530722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 26656955 - 26656724
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||| | || || || ||||| |
|
|
| T |
26656955 |
tcgagaatcaaaagaatcttctttctagatagtctttcctttatgattggaattccctcactaacatctcctaacttaatattcactctaacagtttttg |
26656856 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| ||| |||||||||||||| ||||| | ||||||||||||||| |||| ||||||||||||| || |||||||||||| | | |||||| |
|
|
| T |
26656855 |
aaaggagctcctcctggagatgtttcaaattattatgagctgaattctctctgacattgtgaagaaaacatacaccttcaaattgatcagcgacaaaatt |
26656756 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| |||||| | ||||||||||||||||||| |
|
|
| T |
26656755 |
ataaattgctttggcaagtgttgatttaccca |
26656724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 26762926 - 26762695
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||| | || || || ||||| |
|
|
| T |
26762926 |
tcgagaatcaaaagaatcttctttctagatagtctttcctttatgattggaattccctcactaacatctcctaacttaatattcactctaacagtttttg |
26762827 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| ||| |||||||||||||| ||||| | ||||||||||||||| |||| ||||||||||||| || |||||||||||| | | |||||| |
|
|
| T |
26762826 |
aaaggagctcctcctggagatgtttcaaattattatgagctgaattctctctgacattgtgaagaaaacatacaccttcaaattgatcagcgacaaaatt |
26762727 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| |||||| | ||||||||||||||||||| |
|
|
| T |
26762726 |
ataaattgctttggcaagtgttgatttaccca |
26762695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27337287 - 27337521
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| | || | || |||||| |
|
|
| T |
27337287 |
tcgagaatcaaaagaatcttcttcctacatagcctttccttaatgattggaattccctcagaaacatctcttaacttaatgttcagttgaactgtttttg |
27337386 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| || ||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| ||| |||||||||||| ||| ||||| |
|
|
| T |
27337387 |
aaaggagctccttctggagatgtttcaagtttttacgagctgaattctctctaacattatgaagaaagcatactccttcaaattgatcagcaatgaaatt |
27337486 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
27337487 |
ataaattgcttttgcaagtgttgattttcccaagc |
27337521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27398027 - 27398261
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| | || | || |||||| |
|
|
| T |
27398027 |
tcgagaatcaaaagaatcttcttcctacatagcctttccttaatgattggaattccctcagaaacatctcttaacttaatgttcagttgaactgtttttg |
27398126 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| || ||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| ||| |||||||||||| ||| ||||| |
|
|
| T |
27398127 |
aaaggagctccttctggagatgtttcaagtttttacgagctgaattctctctaacattatgaagaaagcatactccttcaaattgatcagcaatgaaatt |
27398226 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
27398227 |
ataaattgcttttgcaagtgttgattttcccaagc |
27398261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27426804 - 27427033
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||| |||| |||||||||||| || | || ||| || |
|
|
| T |
27426804 |
tcgagaatcaaaagaatcttctttctacacaacctttcctttatgattgagattccctcactgacatctgctaacttaattttcagttgaagtgtctttg |
27426903 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||| |||| |||| | |||||||| ||||| ||||||||||||||| || | | |||||||||||| || |||||||||||| ||| |||||| |
|
|
| T |
27426904 |
aaaggagcatctcctggaaacgtttcaagctatttgaagctgaattctctctgacttgttcaagaaaacataaaccttcaaattgatcagcaacaaaatt |
27427003 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
27427004 |
atagattgctcttgcaagtgttgatttacc |
27427033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 26885057 - 26884826
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||| |||| |||||||||||||||||||| |||||||||| | ||| ||||||||| |||| |
|
|
| T |
26885057 |
agaatcaaaagaatcttctttctatgtagtctttcctttatgagtggaattccctcactaacatctcctaacttaatgtttaatttaattgtttttaaaa |
26884958 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||| | ||| |||||||||||||||||||| | || ||||||||| || || | ||| |||||||||| | |||||||||||| ||| | ||||||| |
|
|
| T |
26884957 |
ggagttcctcctggagatgtttcaagttattatgagttgaattctccctgactttatgcagaaaacatacacattcaaattgatcagcaacataattata |
26884858 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
26884857 |
aattgcttttgcaagtgttgatttacccaagc |
26884826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 25484044 - 25483818
Alignment:
| Q |
6 |
aatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaagg |
105 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||| |||||||| |||||||||||||||| ||||||||| || ||| || | |||| ||||| |
|
|
| T |
25484044 |
aatcaaaagaatcttctttctagatagtctttcctttatgattggtattccctcactaacatcttctaacttaccgtcaaatttaactatttttgaaagg |
25483945 |
T |
|
| Q |
106 |
agcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattataga |
205 |
Q |
| |
|
||| ||| |||||||||||||| |||||| | | |||||||||||| |||| |||||||||||||| || |||||||||||| ||||||||||| | | |
|
|
| T |
25483944 |
agcatcttttggagatgtttcaggttattatgacttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaagaaaattaaaaa |
25483845 |
T |
|
| Q |
206 |
ttgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
25483844 |
ctgcttttgcaagtgttgatttaccca |
25483818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 26143855 - 26143627
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| |||||||| | |||| || |||| | |||| |
|
|
| T |
26143855 |
agaatcaaaagaatcttctttctagatagtctttccttaatgattgaaattccctcactaacatctcctaacttatggttcaatttaactgttcttaaaa |
26143756 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||| | || ||||||||||||| |||||| | | |||||||||||| |||| |||||||||||||| || |||||||||||| ||| ||||||||| |
|
|
| T |
26143755 |
ggagatcttcctggagatgtttcaggttattatgacttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattata |
26143656 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
| |||| ||||||||||||||||||||| |
|
|
| T |
26143655 |
aactgcttttgcaagtgttgatttaccca |
26143627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 25539530 - 25539302
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||||||||||||| || |||| |||||||| ||||||| |||||||||||||||| ||||||||| || ||| || | |||| ||| |
|
|
| T |
25539530 |
agaatcaaaagaatcttctttttagatagtctttcctttatgattgttattccctcactaacatcttctaacttaccgtcaaatttaactatttttgaaa |
25539431 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||||||||| ||||||||||||||||||||| | | |||||||||||| |||| |||||||||||||| | |||||||||||| ||| ||||||| | |
|
|
| T |
25539430 |
ggagcttcttttggagatgtttcaagttattatgacttgaattctctctgacattatgaagaaaacatacaacttcaaattgatcagcaacaaaattaaa |
25539331 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
| |||| ||||||||||||||||||||| |
|
|
| T |
25539330 |
aactgcttttgcaagtgttgatttaccca |
25539302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 26862570 - 26862339
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| |||||||| || | |||||||||||||||| ||| |||||||||| | |||| || |||||| | |
|
|
| T |
26862570 |
tcgagaatcaaaagaatcttcattctatttagtctttcctttataagtggaattccctcactagcatctcctaacttaatgttcaatttaactgttttta |
26862471 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||| |||| || ||||||||||||||| |||| | || |||||||||||| || | |||||||||||||| || ||||||||||| ||| |||||| |
|
|
| T |
26862470 |
aaagaagctccttctggagatgtttcaagctattatgagttgaattctctctaactttatgaagaaaacatacaccttcaaattgatcggcaacaaaatt |
26862371 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| |||||| |||||||||||||||| |||| |
|
|
| T |
26862370 |
ataaattgcttttgcaagtgttgatttcccca |
26862339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 27610315 - 27610544
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||| | ||||||||||| | | || |||||| |||| |
|
|
| T |
27610315 |
agaatcaaaagaaccttctttctatgtagcctttcctttatataaggaattccctcactaacacctccaaacttaatttcaagttgaagtgtttttaaaa |
27610414 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||||| ||| || ||||||||||| |||||| || ||||||||||||||||| | |||||||||| | | |||||||||||| ||| ||||||||| |
|
|
| T |
27610415 |
ggagctcctcctgaagatgtttcaatttatttgaagttgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattata |
27610514 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
27610515 |
aattgcttttgcaagtgttgatttacccaa |
27610544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 26056909 - 26056681
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||| || ||||| |||||||||||||||| ||||||| | || ||| || | |||| ||| |
|
|
| T |
26056909 |
agaatcaaaagaatcttctttctagatagtctttcctttataattggtattccctcactaacatcttctaactgaccgtcaaatttaactatttttgaaa |
26056810 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||||||||| ||||||||||||||||| || || |||||||||||| |||| |||||||||||||| || |||||||||||| ||| | ||||| | |
|
|
| T |
26056809 |
ggagcttcttctggagatgtttcaagttcttaagagttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaatagaattaaa |
26056710 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
| |||| ||||||||||||||||||||| |
|
|
| T |
26056709 |
aactgcttttgcaagtgttgatttaccca |
26056681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 27603896 - 27604128
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||| || | ||||||||||| || | |||||||||||||||| ||||||||||||| | | || |||||| | |
|
|
| T |
27603896 |
tcgagaatcaaaagaatcttcattgaatgcagcctttcctttatatgagaaattccctcactaacacctcctaacttaatttcaagttgaagtgttttta |
27603995 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | |||||||||||| ||| |||||| |
|
|
| T |
27603996 |
aaaggagctcctcctggagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaatt |
27604095 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
||| |||||| |||||||||||||||||||||| |
|
|
| T |
27604096 |
ataaattgcttttgcaagtgttgatttacccaa |
27604128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 25580707 - 25580481
Alignment:
| Q |
6 |
aatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaagg |
105 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||| | ||| || | || | |||||| |
|
|
| T |
25580707 |
aatcaaaagaatcttctttctagatagtctttccttaatgattgaaattccctcactaacatctactaacttaaagtaaaatttaactattattaaaagg |
25580608 |
T |
|
| Q |
106 |
agcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattataga |
205 |
Q |
| |
|
|| | | |||||||||||||||||||| | |||| ||||||| |||| |||||||||||||| || |||||||||||| ||| ||||||||| | |
|
|
| T |
25580607 |
agataataatggagatgtttcaagttattaagaattgaaatctctctgacattatgaagaaaacatacaccttcaaattgatcagcaacaaaattataaa |
25580508 |
T |
|
| Q |
206 |
ttgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
25580507 |
ctgcttttgcaagtgttgatttaccca |
25580481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28787228 - 28786994
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||||||| || |||||||||||||||||| |||||||||||| || | || |||||| | |
|
|
| T |
28787228 |
tcgagaatcaaaagagtcttctttgtatgcagcctttcctttatataaggaattccctcactaacacctcctaacttaattttcagttgaagtgttttta |
28787129 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||| ||| |||||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | |||||||||||| || |||||| |
|
|
| T |
28787128 |
aaaggagcacctcctggagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaatt |
28787029 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||| |
|
|
| T |
28787028 |
ataaattgcttttccaagtgttgatttacccaagc |
28786994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28793349 - 28793115
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| || |||||||||||||||||| |||||||||||| || | || |||||| | |
|
|
| T |
28793349 |
tcgagaatcaaaagaatcttctttgtatgtagcctttcctttatataaggaattccctcactaacacctcctaacttaattttcagttgaagtgttttta |
28793250 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||| ||| |||||||||||||| ||||| ||||||| |||||||||||| | |||||||||| | | |||||||||||| || |||||| |
|
|
| T |
28793249 |
aaaggagcacctcctggagatgtttcaatctatttgaagctgaactctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaatt |
28793150 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||| |
|
|
| T |
28793149 |
ataaattgcttttccaagtgttgatttacccaagc |
28793115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 27717694 - 27717923
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||| | ||||||||||| | | || |||||| |||| |
|
|
| T |
27717694 |
agaatcaaaagaaccttctttctatgtagcctttcctttatataaggaattccctcactaacacctccaaacttaatttcaagttgaagtgtttttaaaa |
27717793 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||||| || || ||||||||||| |||||| || ||||||||||||||||| | |||||||||| | | |||||||||||| ||| ||||||||| |
|
|
| T |
27717794 |
ggagctccttctgaagatgtttcaatttatttgaagttgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattata |
27717893 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
27717894 |
aattgcttttgcaagtgttgatttacccaa |
27717923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 26076879 - 26076651
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||| || ||||| |||||||||||||||| |||| || | || ||| || | |||| ||| |
|
|
| T |
26076879 |
agaatcaaaagaatcttctttctagatagtctttcctttataattggtattccctcactaacatcttctatctgaccgtcaaatttaactatttttgaaa |
26076780 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||||||||| ||||||||||||||||| || || |||||||||||| |||| |||||||||||||| || |||||||||||| ||| | ||||| | |
|
|
| T |
26076779 |
ggagcttcttctggagatgtttcaagttcttaagagttgaattctctctgacattatgaagaaaacatacaccttcaaattgatcagcaatagaattaaa |
26076680 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
| |||| ||||||||||||||||||||| |
|
|
| T |
26076679 |
aactgcttttgcaagtgttgatttaccca |
26076651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 25511879 - 25511651
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||| || ||||| |||||||||||||||| |||| || | || ||| || | |||| ||| |
|
|
| T |
25511879 |
agaatcaaaagaatcttctttctagatagtctttcctttataattggtattccctcactaacatcttctatctgaccgtcaaatttaactatttttgaaa |
25511780 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||||||||| ||||||||||||||||| || || |||||||||||| |||| |||||||||||||| | |||||||||||| ||| | ||||| | |
|
|
| T |
25511779 |
ggagcttcttctggagatgtttcaagttcttaagagttgaattctctctgacattatgaagaaaacatacactttcaaattgatcagcaatagaattaaa |
25511680 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
| |||| ||||||||||||||||||||| |
|
|
| T |
25511679 |
aactgcttttgcaagtgttgatttaccca |
25511651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 27676815 - 27677046
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| || | |||||||| || |||||| ||||||||||||| | | || |||||| |||| |
|
|
| T |
27676815 |
agaatcaaaagaatcttctttccatgtagcctttcctttattttaggaattccttcgctaacacttcctaacttaatttcaagttgaagtgtttttaaaa |
27676914 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||||| || ||||||| ||||||||||||| ||||||| ||||| |||||| | |||||||||| | | |||||||||||| ||| ||||||||| |
|
|
| T |
27676915 |
ggagctcctgctggagatttttcaagttatttgaagctgaactctctttcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattata |
27677014 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||| | |||||||||||||| ||||||| |
|
|
| T |
27677015 |
aattgctttcgcaagtgttgattttcccaagc |
27677046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 25492511 - 25492745
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| | || || ||||||| |||||||||||||||| ||||||||| || |||| || ||||| |
|
|
| T |
25492511 |
tcgagaatcaaaagaatcttctctctacatagtccttgttttatgattgcaattccctcactaacacttcttaacttaatgtctaatctaaccattttcg |
25492610 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| || || ||||||| ||||||||| || || |||||||||||||||||| ||||||||||| || |||||||||||| ||| || || |
|
|
| T |
25492611 |
aaaggagtttttcctggagatctttcaagtttcttggagttgaattctctctcacatctcctagaaaacataaaccttcaaattgatcagcaatgaagtt |
25492710 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||||| | ||||||||||||||||||| |||| |
|
|
| T |
25492711 |
atagattgattttgcaagtgttgatttacctaagc |
25492745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28782091 - 28781857
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||||||| || |||||||||||||||||| |||||||||||| || | || || ||| | |
|
|
| T |
28782091 |
tcgagaatcaaaagagtcttctttgtatgcagcctttcctttatataaggaattccctcactaacacctcctaacttaattttcagttgaagtgctttta |
28781992 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | |||||||||||| ||| || || |
|
|
| T |
28781991 |
aaaggagctcctcctggagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaattaagtt |
28781892 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| | |||| || ||||||||||||||||||||| |
|
|
| T |
28781891 |
ataaactgcttttacaagtgttgatttacccaagc |
28781857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 27592216 - 27592447
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||| || | |||||||| || |||||| ||||||||||||| | | || |||||| |||| |
|
|
| T |
27592216 |
agaatcaaaagaatcttctttccatgtagcctttcctttattttaggaattccttcgctaacacttcctaacttaatttcaagttgaagtgtttttaaaa |
27592315 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||||| || ||||||| ||||||||||||| ||||||| ||||| |||||| | |||||||||| | | |||||||||||| ||| ||| ||||| |
|
|
| T |
27592316 |
ggagctcctgctggagatttttcaagttatttgaagctgaactctctttcacattttcaagaaaacatgagcattcaaattgatcagcaataaagttata |
27592415 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||| | |||||||||||||| ||||||| |
|
|
| T |
27592416 |
aattgctttcgcaagtgttgattttcccaagc |
27592447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 28140525 - 28140295
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||| ||||||| | |||||||||||| || ||||| ||||| ||||| ||||| | ||||||| ||| |||| |||||| |
|
|
| T |
28140525 |
tcgagaatcaaaagaaccttctttagtcgtagcctttcctttattattggtattccttcacttacatgtccaaacttaacgctcaaaccaactgttttag |
28140426 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| || |||||||||| || ||| || |||||||||| | |||||||||| |||||||||||| || | ||||||||||| ||| |||||| |
|
|
| T |
28140425 |
aaaggagtttttcttggagatcttctaagccatgtttagctgaaatttctctcacattatgaagaaaacacaaacattcaaattgatcggcaataaaatt |
28140326 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccc |
231 |
Q |
| |
|
||| |||||| ||||||||||| ||||||| |
|
|
| T |
28140325 |
ataaattgcttgtgcaagtgttgttttaccc |
28140295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26824809 - 26824580
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||| ||||| |||||||| | ||| || || || |||||| |||| || | ||||||| ||||||||||||| |||||||||||| | |
|
|
| T |
26824809 |
tcgagaatcagaagaactttctttctgcgtagtctatcttttatgatttgaataccttgactaacacctcctaacttaatttcttctccaattgttttta |
26824710 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||||||||||| || |||| || |||||||||||||||||||| | | ||||||||| || | ||||||| |||| ||| | |||| |
|
|
| T |
26824709 |
aaaggagttgctcttggagattttccaagccatgcttagctgaattctctctcacgttctcaagaaaacaaaaaacttcaaatttatcagcaatagaatt |
26824610 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
| | ||||| ||||||||||||||||||| |
|
|
| T |
26824609 |
aaaagttgcttttgcaagtgttgatttacc |
26824580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 29826973 - 29826744
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||| | ||||||| | |||||||| ||| || ||||||||||| || |||||| ||| |||| | |||||| ||| |||||| ||| |
|
|
| T |
29826973 |
agaatcaaaagtactttctttcgtcctagcctttgctttattattggaattccttcgttaacatctcctagcttagtgtccaattcaactgttttggaaa |
29826874 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
| ||||||| ||||||||||| ||| || |||||||||| | ||||||| |||||||||||||| || | ||||||| |||||||| | |||||| |
|
|
| T |
29826873 |
gaagcttctgttggagatgttctaagccatgtttagctgaactttctctcaagtcatgaagaaaacacaagcattcaaatttatcaccaatcatattata |
29826774 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
||||||| |||||||||| ||||||||| |
|
|
| T |
29826773 |
aattgctcgagcaagtgttgttttacccaa |
29826744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 27215439 - 27215211
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||| || || ||| ||| |||||||||||| |||||||| || |||| || ||||||| || |
|
|
| T |
27215439 |
agaatcaaaagaatcttcttttgacatagcattttttttatctttgtaatcccctcactaacacctcctaacttatcgtctaatctaaccgttttcataa |
27215340 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||| ||| || || || ||||||||||||||| || |||||||||| ||||||| | |||||| || | || ||||| |||||| ||| |||||| | |
|
|
| T |
27215339 |
ggatcttttcctgcaggtgtttcaagttatttaaagttgaattctctttcacatcttctagaaaatatgaaccttcaaactgatcagcaatgaaattaaa |
27215240 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
|||||| ||||||||||||||||||||| |
|
|
| T |
27215239 |
aattgcttttgcaagtgttgatttaccca |
27215211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 233
Target Start/End: Original strand, 29843224 - 29843411
Alignment:
| Q |
46 |
attggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaaggagcttctcttggagatgtttcaagttatttttagctgaat |
145 |
Q |
| |
|
||||||||||| ||| |||||| ||| |||||| ||||| ||| |||||| |||| ||||||||||||||||| | ||| || |||||||||| |
|
|
| T |
29843224 |
attggaattccttcattaacatctcctagcttaatgtccaaatcaactgttttggaaagaagcttctcttggagatgctctaagccatgtttagctgaac |
29843323 |
T |
|
| Q |
146 |
tctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
| |||||| | || ||||||||||| || | ||||||| |||| ||| |||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
29843324 |
tttctctcccgtcgtgaagaaaacacaaacattcaaatttatcagcaatcaaattataaattgctcgagcaagtgttgttttacccaa |
29843411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 26937866 - 26937790
Alignment:
| Q |
154 |
acatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
|||| |||||||||||| || | |||||||||||||||| |||||||| ||||||| |||||||||||||||||| |
|
|
| T |
26937866 |
acattatgaagaaaacacaaactttcaaattgatcaccaatcaaattataaattgctcgtgcaagtgttgatttacc |
26937790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 28227808 - 28227720
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttg |
223 |
Q |
| |
|
|||||||||||| || || ||||| ||||||||||| || |||||||||||||| | | ||||||||| | ||| ||||||||||||| |
|
|
| T |
28227808 |
tttagctgaattttcccttacatcgtgaagaaaacacaaaccatcaaattgatcggctataaaattataaactgcccttgcaagtgttg |
28227720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 28243651 - 28243563
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttg |
223 |
Q |
| |
|
||||| |||||| || || ||||| |||||||||||||| | ||||||||||||| | | ||||||| | ||||||||||||||||| |
|
|
| T |
28243651 |
tttagttgaattttcccttacatcgtgaagaaaacataaacaatcaaattgatcagctatggaattataaactgctcttgcaagtgttg |
28243563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 189
Target Start/End: Complemental strand, 26724516 - 26724370
Alignment:
| Q |
43 |
atgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaaggagcttctcttggagatgtttcaagttatttttagctg |
142 |
Q |
| |
|
||||||| ||| || |||||||||| | ||||||| ||||||||| ||| ||| | ||||||||||||||||||| || ||| || |||| || |
|
|
| T |
26724516 |
atgattgaaatcccttcactaacatctccgaacttaaattccaatccgattaatttggagaggagcttctcttggagatattctaagccatatttaattg |
26724417 |
T |
|
| Q |
143 |
aattctctctcacatcatgaagaaaacataatccatcaaattgatca |
189 |
Q |
| |
|
|||| |||||||||| ||||| ||||| || || |||||||||||| |
|
|
| T |
26724416 |
aattttctctcacattgtgaaggaaacacaacccttcaaattgatca |
26724370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 221
Target Start/End: Complemental strand, 28186249 - 28186163
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgt |
221 |
Q |
| |
|
|||||||||||| | || ||||| ||||||||||| || |||||||||||||| | || ||||||| | ||||||||||||||| |
|
|
| T |
28186249 |
tttagctgaatttccccttacatcgtgaagaaaacacaaatcatcaaattgatcagctagggaattataaactgctcttgcaagtgt |
28186163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 25074857 - 25074737
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||| | || |||||| |||||||||| ||| |||||||||||||| ||| ||||||| | |||||| |||| ||||| |||| ||| | |
|
|
| T |
25074857 |
tcgagaatcaacaaaactttcttttgacatagccttcgctttatgattggaattccttcattaacatgtccaaacttagtttcaaatccgattgatttaa |
25074758 |
T |
|
| Q |
101 |
aaaggagcttctcttggagat |
121 |
Q |
| |
|
| || |||| |||||| |||| |
|
|
| T |
25074757 |
agagaagctgctcttgaagat |
25074737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 28235421 - 28235333
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttg |
223 |
Q |
| |
|
||||| |||||| || || || || ||||||||||| || ||||||||||||||| | | ||||||| | ||||||||||||||||| |
|
|
| T |
28235421 |
tttagatgaattttcccttacgtcgtgaagaaaacacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagtgttg |
28235333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 267532 - 267766
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
267532 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaatgccctcactaacatggtctaacttaatttccaatccagttgttttta |
267631 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||| |
|
|
| T |
267632 |
aaaggagcttctcttggagatgtttcaagttacttatagctgaattttctctcacatcatgaagaaaacataatccttcaaattgatcagcaataaaatt |
267731 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
267732 |
atagattgctcttgcaagggttgatttacccaagc |
267766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 28126870 - 28127101
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||| |||||||||| |||||||||| ||||||||||| |
|
|
| T |
28126870 |
agaatcaaaagaatcttctttctgcatagcctttgttttatgattgcaattccctcactaacacctcctaacttaatgtccaatccaactgttttcaaaa |
28126969 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||||||| ||||||||||||||||| |||| | || |||| ||||||||||||| | ||||||||||| || |||||||||||| ||| |||||||| |
|
|
| T |
28126970 |
ggagcttttcttggagatgtttcaaattatatggagttgaaatctctctcacatcttctagaaaacataaaccttcaaattgatcagcaatgaaattata |
28127069 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
28127070 |
aattgcttttgcaagtgttgatttacccaagc |
28127101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 28163571 - 28163801
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
|||||||||||||| || |||||| |||||||| || ||||||| |||||||||||||||| |||||||||| ||| ||| || ||||| ||||| |
|
|
| T |
28163571 |
agaatcaaaagaattttatttctatgtagcctttgttttatgattgtaattccctcactaacacctcctaacttaatgtccgatctaactgttt-caaaa |
28163669 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
||||| || ||||||||||||||||| | || |||||||||||||||||| | ||||||||||| || |||||||||||| ||| |||||||| |
|
|
| T |
28163670 |
agagctcttcctggagatgtttcaagttggatggagttgaattctctctcacatcttctagaaaacataaaccttcaaattgatcagcaatgaaattata |
28163769 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
28163770 |
aattgcttttgcaagtgttgatttacccaagc |
28163801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26136878 - 26136649
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||| | ||| |||||| | ||||||||| || |||||||||||||| | ||||||||| |||||||||| |||||||| |||| ||| |
|
|
| T |
26136878 |
tcgagaatcaacaaaattttcttttgatgtagcctttcttttatgattggaattcctttactaacatgtcctaacttaatctccaatccgattgatttgg |
26136779 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
| ||||||| ||||||||||| || ||| || |||| ||||||| |||| ||||| ||||| || || ||||| ||||||||||| ||| ||||| |
|
|
| T |
26136778 |
agaggagctgctcttggagatattctaagccatatttaactgaattttctcgcacattgtgaaggaagcacaatccttcaaattgatccgcaatcaaatt |
26136679 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
||| | ||||| | |||||||| |||||| |
|
|
| T |
26136678 |
ataaactgctcgagtaagtgttgttttacc |
26136649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 29273030 - 29273264
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||| ||||| || |||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | |
|
|
| T |
29273030 |
tcgagaatcaaaagaattttctttctacttagcctctcctttataattggaatcccctcactaacatgatctaacttaatttccaatccagttgttttta |
29273129 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||| |
|
|
| T |
29273130 |
aaaggagtttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataaatcttcaaattgatcagcaaaaaaatt |
29273229 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
29273230 |
atagattgctcttgcaagggttgatttacccaagc |
29273264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 60559 - 60330
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||| |||| |||||||||||| || | || ||| || |
|
|
| T |
60559 |
tcgagaatcaaaagaatcttctttctacacaacctttcctttatgattgagattccctcactgacatctgctaacttaattttcagttgaagtgtctttg |
60460 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||| |||| |||| | |||||||| ||||| ||||||||||||||| || | | |||||||||||| || |||||||||||| ||| |||||| |
|
|
| T |
60459 |
aaaggagcatctcctggaaacgtttcaagctatttgaagctgaattctctctgacttgttcaagaaaacataaaccttcaaattgatcagcaacaaaatt |
60360 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
60359 |
atagattgctcttgcaagtgttgatttacc |
60330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 18074751 - 18074522
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||||||| |||| |||||||||||| || | || ||| || |
|
|
| T |
18074751 |
tcgagaatcaaaagaatcttctttctacacaacctttcctttatgattgagattccctcactgacatctgctaacttaattttcagttgaagtgtctttg |
18074652 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||| |||| |||| | |||||||| ||||| ||||||||||||||| || | | |||||||||||| || |||||||||||| ||| |||||| |
|
|
| T |
18074651 |
aaaggagcatctcctggaaacgtttcaagctatttgaagctgaattctctctgacttgttcaagaaaacataaaccttcaaattgatcagcaacaaaatt |
18074552 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
18074551 |
atagattgctcttgcaagtgttgatttacc |
18074522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 18678748 - 18678979
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| || |||||||||||||||||| |||||||||||| || | || |||||| | |
|
|
| T |
18678748 |
tcgagaatcaaaagaatcttctttgtatgtagcctttcctttatataaggaattccctcactaacacctcctaacttaattttcagtgaaagtgttttta |
18678847 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| | |||| |||||||||||||||||||| | |||||||||| | | |||||||||||| ||| |||||| |
|
|
| T |
18678848 |
aaaggagttcctcctggagatgtttcaattgatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaatt |
18678947 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| |||||| ||||||||||| ||||||||| |
|
|
| T |
18678948 |
ataaattgcttttgcaagtgttaatttaccca |
18678979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 18698588 - 18698819
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||| || |||||||||||||||||| |||||||||||| || | | | |||||| | |
|
|
| T |
18698588 |
tcgagaatcaaaagaatcttctttgtatgcagcctttcctttatataaggaattccctcactaacacctcctaacttaattttcagtgctagtgttttta |
18698687 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| | |||| |||||||||||||||||||| | |||||||||| | | |||||||||||| ||| |||||| |
|
|
| T |
18698688 |
aaaggagttcctcctggagatgtttcaattgatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaatt |
18698787 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| |||||| | ||||||||||||||||||| |
|
|
| T |
18698788 |
ataaattgctttcgcaagtgttgatttaccca |
18698819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 18730692 - 18730923
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| || |||||||||||||||||| |||||||||||| || | | | |||||| | |
|
|
| T |
18730692 |
tcgagaatcaaaagaatcttctttgtatgtagcctttcctttatatagggaattccctcactaacacctcctaacttaattttcagtgctagtgttttta |
18730791 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| | |||| |||||||||||||||||||| | |||||||||| | | |||||||||||| ||| |||||| |
|
|
| T |
18730792 |
aaaggagttcctcctggagatgtttcaattgatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaatt |
18730891 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| ||| || | |||||||||||||| |||| |
|
|
| T |
18730892 |
ataaattactttagcaagtgttgattttccca |
18730923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 18654665 - 18654896
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||| || |||||||||||||||||| |||||||||||| || | || |||||| | |
|
|
| T |
18654665 |
tcgagaatcaaaagaatcttctttgtatgtagcctttcctttatataaggaattccctcactaacacctcctaacttaattttcagtgaaagtgttttta |
18654764 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| | |||| || |||||| |||||||||| | |||||||||| | | |||||||||||| ||| | |||| |
|
|
| T |
18654765 |
aaaggagttcctcctggagatgtttcaattgatttgaagatgaattttctctcacattttcaagaaaacatgagcattcaaattgatcagcaatacaatt |
18654864 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
|| |||| | |||||||||||||||| |||| |
|
|
| T |
18654865 |
attaattgattttgcaagtgttgattttccca |
18654896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 18723273 - 18723504
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||| ||| || ||||||| |||||||||| |||| ||||||| || | || |||||| | |
|
|
| T |
18723273 |
tcgagaatcaaaagaatcttctttgtatgtagccttttctttatataaggaattctctcactaacacctcctaagttaattttcagtgaaagtgttttta |
18723372 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| | |||| |||||||||||||||||| | | |||||||||| | | |||||||||||| ||| |||||| |
|
|
| T |
18723373 |
aaaggagttcctcctggagatgtttcaattgatttgaagctgaattctctctcacgttttcaagaaaacatgagcattcaaattgatcagcaataaaatt |
18723472 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttaccca |
232 |
Q |
| |
|
||| ||| || |||||||||||||||| |||| |
|
|
| T |
18723473 |
ataaattccttttgcaagtgttgattttccca |
18723504 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5090142 - 5090247
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||| | || | ||| |||||||||||||||||||||| | |
|
|
| T |
5090142 |
tcgagaatcaaaagaactttctttctttgtagccttttctttatgattggaattccctcactgatatctccaaacctaatttccaatccaattgttttaa |
5090241 |
T |
|
| Q |
101 |
aaagga |
106 |
Q |
| |
|
|||||| |
|
|
| T |
5090242 |
aaagga |
5090247 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 3904 - 4138
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||| || | |||||||||||||||| ||||||||||||| | | || |||||| | |
|
|
| T |
3904 |
tcgagaatcaaaagaatcttctttgaatgcagcctttcctttatatgagaaattccctcactaacacctcctaacttaatttcaagttgaagtgttttta |
4003 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | ||||||| |||| ||| |||||| |
|
|
| T |
4004 |
aaaggagctcctcctggagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattcatcagcaataaaatt |
4103 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||| |
|
|
| T |
4104 |
ataaattgcttttccaagtgttgatttacccaagc |
4138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 12867 - 13101
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||||||| || |||||||||||||||||| |||||||| ||| | | || |||||| | |
|
|
| T |
12867 |
tcgagaatcaaaagagtcttctttgtatgcagcctttcctttatataaggaattccctcactaacacttcctaacttagttttctgttgaagtgttttta |
12966 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | |||||||||||| || |||||| |
|
|
| T |
12967 |
aaaggagttcctcctggagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaatt |
13066 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||| |
|
|
| T |
13067 |
ataaattgcttttccaagtgttgatttacccaagc |
13101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 2734 - 2963
Alignment:
| Q |
4 |
agaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaa |
103 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||| || |||||||||||||||||| | ||||||||||| | | || |||||| |||| |
|
|
| T |
2734 |
agaatcaaaagaaccttctttctatgtagcctttcctttatataaggaattccctcactaacacctccaaacttaatttcaagttgaagtgtttttaaaa |
2833 |
T |
|
| Q |
104 |
ggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattata |
203 |
Q |
| |
|
|||||| | || ||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | |||||||||||| ||| ||||||||| |
|
|
| T |
2834 |
ggagctccaactgaagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagcaataaaattata |
2933 |
T |
|
| Q |
204 |
gattgctcttgcaagtgttgatttacccaa |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |
|
|
| T |
2934 |
aattgcttttgcaagtgttgatttacccaa |
2963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 8477 - 8243
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||||||| || |||||||||||||||||| |||||||| ||| | | || |||||| | |
|
|
| T |
8477 |
tcgagaatcaaaagagtcttctttgtatgcagcctttcctttatataaggaattccctcactaacacttcctaacttagttttctgttgaagtgttttta |
8378 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
||||||| | ||| |||||||||||||| |||||| |||||||||||||||||||| | |||||||||| | | |||||||||||| || |||||| |
|
|
| T |
8377 |
aaaggagttcctcctggagatgtttcaatttatttgaagctgaattctctctcacattttcaagaaaacatgagcattcaaattgatcagaaataaaatt |
8278 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacccaagc |
235 |
Q |
| |
|
||| |||||| || ||||||||||||||||||||| |
|
|
| T |
8277 |
ataaattgcttttccaagtgttgatttacccaagc |
8243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 16691857 - 16691628
Alignment:
| Q |
1 |
tcgagaatcaaaagaatcttctttctacatagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttca |
100 |
Q |
| |
|
|||||||||||||||| ||| ||| |||||||| || || ||||||||||| ||||||||||| |||||||||| || |||||||| ||||| |
|
|
| T |
16691857 |
tcgagaatcaaaagaacctttttttgttgtagcctttgttttattattggaattccttcactaacatgtcctaacttaatgtctaatccaatggttttgg |
16691758 |
T |
|
| Q |
101 |
aaaggagcttctcttggagatgtttcaagttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaatt |
200 |
Q |
| |
|
|||||||| | ||||| ||||||| ||| || ||||| |||||| |||||||| |||||||||||||| || | |||||||||||| ||| ||||| |
|
|
| T |
16691757 |
aaaggagcctttcttgaagatgttctaagccatgtttagatgaattttctctcacgtcatgaagaaaacacaaacattcaaattgatcagcaatcaaatt |
16691658 |
T |
|
| Q |
201 |
atagattgctcttgcaagtgttgatttacc |
230 |
Q |
| |
|
||| ||||||| |||||||||| |||||| |
|
|
| T |
16691657 |
ataaattgctcgagcaagtgttgttttacc |
16691628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 28306 - 28218
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttg |
223 |
Q |
| |
|
|||||||||||| || || ||||| ||||||||||| || |||||||||||||| | | ||||||||| | ||| ||||||||||||| |
|
|
| T |
28306 |
tttagctgaattttcccttacatcgtgaagaaaacacaaaccatcaaattgatcggctataaaattataaactgcccttgcaagtgttg |
28218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 43813 - 43725
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttg |
223 |
Q |
| |
|
||||| |||||| || || ||||| |||||||||||||| | ||||||||||||| | | ||||||| | ||||||||||||||||| |
|
|
| T |
43813 |
tttagttgaattttcccttacatcgtgaagaaaacataaacaatcaaattgatcagctatggaattataaactgctcttgcaagtgttg |
43725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 35583 - 35495
Alignment:
| Q |
135 |
tttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttg |
223 |
Q |
| |
|
||||| |||||| || || || || ||||||||||| || ||||||||||||||| | | ||||||| | ||||||||||||||||| |
|
|
| T |
35583 |
tttagatgaattttcccttacgtcgtgaagaaaacacaaaccatcaaattgatcagctatggaattataaactgctcttgcaagtgttg |
35495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 232
Target Start/End: Complemental strand, 3280620 - 3280418
Alignment:
| Q |
30 |
tagcctttccttaatgattggaattccctcactaacatggtctaacttaatttccaatccaattgttttcaaaaggagcttctcttggagatgtttcaag |
129 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||| || |||||||||| |||||||||| ||||| |||| | | || ||||||||| | | |
|
|
| T |
3280620 |
tagcctttgctttatgattggaattccctcactactatctcctaacttaatgtccaatccaacagttttggaaagaaaatccttttggagatgctctaga |
3280521 |
T |
|
| Q |
130 |
ttatttttagctgaattctctctcacatcatgaagaaaacataatccatcaaattgatcaccaagaaaattatagattgctcttgcaagtgttgatttac |
229 |
Q |
| |
|
|| ||| |||||||| |||||||||| ||||||||||||| | |||||||||| | ||| |||||||| | |||||||||||| |||| |||| |
|
|
| T |
3280520 |
ccatgttttgctgaattttctctcacattgtgaagaaaacatacacattcaaattgattagcaatgaaattataaactgctcttgcaagagttgtcttac |
3280421 |
T |
|
| Q |
230 |
cca |
232 |
Q |
| |
|
||| |
|
|
| T |
3280420 |
cca |
3280418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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