View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16755_low_35 (Length: 221)

Name: NF16755_low_35
Description: NF16755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16755_low_35
NF16755_low_35
[»] chr6 (23 HSPs)
chr6 (2-209)||(4161722-4161930)
chr6 (2-209)||(4223342-4223550)
chr6 (125-204)||(4868576-4868655)
chr6 (125-204)||(4868812-4868891)
chr6 (124-204)||(9705260-9705340)
chr6 (127-202)||(8026397-8026472)
chr6 (127-202)||(21690730-21690805)
chr6 (127-202)||(27772722-27772797)
chr6 (125-202)||(11721913-11721990)
chr6 (125-202)||(25065093-25065170)
chr6 (125-202)||(33494547-33494624)
chr6 (124-200)||(6054413-6054489)
chr6 (125-204)||(9705026-9705105)
chr6 (125-204)||(13353207-13353286)
chr6 (127-202)||(27656466-27656541)
chr6 (127-202)||(30256821-30256895)
chr6 (125-204)||(33796332-33796411)
chr6 (126-204)||(30256584-30256662)
chr6 (127-204)||(8566960-8567036)
chr6 (131-204)||(12329949-12330022)
chr6 (127-204)||(12330180-12330257)
chr6 (127-155)||(8026659-8026687)
chr6 (127-155)||(12330292-12330320)
[»] chr1 (27 HSPs)
chr1 (2-204)||(52215002-52215204)
chr1 (127-202)||(3169774-3169849)
chr1 (125-204)||(4112539-4112618)
chr1 (125-204)||(4113005-4113084)
chr1 (125-204)||(25713399-25713478)
chr1 (125-204)||(40079158-40079237)
chr1 (125-204)||(42586438-42586516)
chr1 (125-203)||(26177150-26177228)
chr1 (125-200)||(17452827-17452902)
chr1 (125-204)||(38668131-38668210)
chr1 (127-202)||(51589814-51589889)
chr1 (127-200)||(17452680-17452753)
chr1 (125-202)||(30369843-30369920)
chr1 (120-209)||(49142954-49143043)
chr1 (125-209)||(31181512-31181596)
chr1 (125-204)||(35772270-35772349)
chr1 (125-155)||(20208228-20208258)
chr1 (125-155)||(20208527-20208557)
chr1 (125-155)||(25255366-25255396)
chr1 (125-155)||(29266008-29266038)
chr1 (125-155)||(33156788-33156818)
chr1 (125-155)||(35772084-35772114)
chr1 (125-203)||(39348352-39348429)
chr1 (126-155)||(4098403-4098432)
chr1 (123-155)||(2859389-2859421)
chr1 (125-209)||(42351859-42351943)
chr1 (124-204)||(52650769-52650849)
[»] chr5 (27 HSPs)
chr5 (125-204)||(17352667-17352746)
chr5 (123-204)||(41666754-41666835)
chr5 (125-204)||(24531605-24531684)
chr5 (125-204)||(41666992-41667071)
chr5 (125-202)||(20510641-20510718)
chr5 (124-204)||(19705909-19705989)
chr5 (125-200)||(13296683-13296757)
chr5 (125-204)||(24346500-24346579)
chr5 (125-204)||(24528546-24528625)
chr5 (116-204)||(18333455-18333543)
chr5 (125-204)||(18333698-18333778)
chr5 (127-202)||(7607602-7607677)
chr5 (125-204)||(15438993-15439072)
chr5 (125-204)||(15480328-15480407)
chr5 (125-204)||(24269870-24269948)
chr5 (127-202)||(27132994-27133069)
chr5 (125-204)||(38976939-38977018)
chr5 (125-155)||(2063733-2063763)
chr5 (125-203)||(12034697-12034775)
chr5 (125-155)||(25258093-25258123)
chr5 (125-155)||(25321883-25321913)
chr5 (125-155)||(28510146-28510176)
chr5 (122-204)||(35167391-35167473)
chr5 (127-200)||(29909722-29909795)
chr5 (125-204)||(8081112-8081192)
chr5 (127-155)||(17016398-17016426)
chr5 (128-204)||(24647702-24647778)
[»] chr4 (33 HSPs)
chr4 (125-204)||(35788665-35788744)
chr4 (123-204)||(22845444-22845525)
chr4 (124-204)||(22863480-22863560)
chr4 (125-204)||(6218445-6218524)
chr4 (127-202)||(9685640-9685715)
chr4 (125-204)||(50543566-50543645)
chr4 (124-204)||(35788900-35788980)
chr4 (125-204)||(11036510-11036589)
chr4 (127-202)||(21498803-21498878)
chr4 (125-200)||(22231307-22231382)
chr4 (125-204)||(50543329-50543408)
chr4 (125-204)||(52559573-52559652)
chr4 (125-203)||(22827545-22827623)
chr4 (125-202)||(6218212-6218289)
chr4 (127-204)||(28245527-28245604)
chr4 (125-202)||(53828522-53828599)
chr4 (127-202)||(21498362-21498437)
chr4 (127-202)||(25052860-25052935)
chr4 (125-204)||(39902562-39902641)
chr4 (125-155)||(12869262-12869292)
chr4 (125-155)||(17111618-17111648)
chr4 (125-155)||(40717440-40717470)
chr4 (125-155)||(53559289-53559319)
chr4 (125-202)||(1518172-1518249)
chr4 (122-155)||(7926613-7926646)
chr4 (117-202)||(12869020-12869105)
chr4 (125-202)||(35796976-35797053)
chr4 (125-154)||(40726777-40726806)
chr4 (125-202)||(53828288-53828365)
chr4 (127-155)||(9685453-9685481)
chr4 (127-155)||(14783188-14783216)
chr4 (122-154)||(53814670-53814702)
chr4 (127-155)||(54054806-54054834)
[»] chr3 (27 HSPs)
chr3 (125-204)||(31317472-31317551)
chr3 (125-204)||(35038193-35038272)
chr3 (125-204)||(54368522-54368601)
chr3 (125-204)||(54567898-54567977)
chr3 (125-202)||(1723075-1723152)
chr3 (127-204)||(13574922-13574999)
chr3 (128-209)||(33205466-33205547)
chr3 (127-202)||(11589793-11589868)
chr3 (125-203)||(4155331-4155409)
chr3 (124-180)||(37246665-37246721)
chr3 (125-209)||(41915172-41915255)
chr3 (125-204)||(16239597-16239676)
chr3 (127-202)||(20327850-20327925)
chr3 (126-209)||(45828247-45828330)
chr3 (125-155)||(4155614-4155644)
chr3 (125-155)||(17638289-17638319)
chr3 (125-155)||(24866252-24866282)
chr3 (125-155)||(27086696-27086726)
chr3 (127-204)||(50052540-50052618)
chr3 (125-202)||(8018976-8019053)
chr3 (122-155)||(18757897-18757930)
chr3 (131-200)||(20327619-20327688)
chr3 (125-158)||(27086642-27086675)
chr3 (124-157)||(43781636-43781669)
chr3 (124-204)||(472058-472138)
chr3 (127-155)||(21833403-21833431)
chr3 (127-155)||(47702410-47702438)
[»] scaffold0766 (2 HSPs)
scaffold0766 (122-204)||(6280-6362)
scaffold0766 (122-155)||(6394-6427)
[»] chr2 (24 HSPs)
chr2 (122-204)||(16419508-16419590)
chr2 (122-204)||(25082533-25082615)
chr2 (122-204)||(40379205-40379287)
chr2 (125-202)||(28407792-28407869)
chr2 (122-209)||(19570970-19571057)
chr2 (125-204)||(40379443-40379522)
chr2 (125-204)||(5711438-5711517)
chr2 (125-204)||(33606288-33606367)
chr2 (126-204)||(32356392-32356469)
chr2 (124-201)||(17719575-17719652)
chr2 (126-202)||(21591789-21591866)
chr2 (125-204)||(2029775-2029854)
chr2 (125-204)||(2030010-2030089)
chr2 (131-202)||(2324248-2324319)
chr2 (125-204)||(15124782-15124861)
chr2 (127-202)||(19191611-19191686)
chr2 (125-155)||(93626-93656)
chr2 (127-200)||(8424898-8424971)
chr2 (125-154)||(31700744-31700773)
chr2 (121-202)||(37769938-37770019)
chr2 (127-204)||(40149004-40149081)
chr2 (130-202)||(2324482-2324554)
chr2 (124-204)||(24395870-24395949)
chr2 (126-202)||(29718336-29718412)
[»] scaffold0692 (2 HSPs)
scaffold0692 (125-204)||(5753-5832)
scaffold0692 (125-204)||(5543-5622)
[»] chr8 (40 HSPs)
chr8 (127-202)||(39743537-39743612)
chr8 (127-204)||(28213105-28213181)
chr8 (123-202)||(39960199-39960279)
chr8 (125-200)||(8084137-8084212)
chr8 (125-204)||(15042669-15042748)
chr8 (127-202)||(19256587-19256662)
chr8 (127-202)||(24075307-24075382)
chr8 (125-204)||(24532420-24532499)
chr8 (125-204)||(25325652-25325731)
chr8 (125-204)||(35682780-35682859)
chr8 (125-204)||(39052928-39053007)
chr8 (125-203)||(22638178-22638256)
chr8 (125-203)||(37001233-37001311)
chr8 (125-204)||(10884070-10884149)
chr8 (124-200)||(12547109-12547184)
chr8 (125-204)||(11232193-11232272)
chr8 (125-204)||(11232428-11232507)
chr8 (125-204)||(12317052-12317131)
chr8 (127-202)||(17469826-17469901)
chr8 (127-202)||(17477073-17477148)
chr8 (127-202)||(19256821-19256896)
chr8 (125-204)||(20301267-20301346)
chr8 (125-204)||(21087899-21087978)
chr8 (124-155)||(27205215-27205246)
chr8 (128-202)||(4828301-4828375)
chr8 (122-200)||(8084372-8084450)
chr8 (124-202)||(18939295-18939373)
chr8 (125-155)||(20301562-20301592)
chr8 (125-155)||(21088194-21088224)
chr8 (125-155)||(27205019-27205049)
chr8 (125-155)||(27205117-27205147)
chr8 (125-155)||(37001519-37001549)
chr8 (125-155)||(41790713-41790743)
chr8 (125-155)||(42846604-42846634)
chr8 (122-155)||(10450055-10450088)
chr8 (122-155)||(10454481-10454514)
chr8 (127-200)||(28069358-28069431)
chr8 (123-155)||(3157324-3157356)
chr8 (125-209)||(10614938-10615022)
chr8 (127-155)||(34653205-34653233)
[»] chr7 (35 HSPs)
chr7 (125-204)||(25620142-25620221)
chr7 (125-200)||(33996310-33996385)
chr7 (125-204)||(47710449-47710528)
chr7 (125-204)||(47722105-47722184)
chr7 (127-204)||(29469846-29469923)
chr7 (124-204)||(21861535-21861615)
chr7 (127-202)||(31257032-31257107)
chr7 (127-202)||(34027401-34027476)
chr7 (125-204)||(36277225-36277304)
chr7 (125-204)||(48243060-48243139)
chr7 (125-202)||(21054952-21055029)
chr7 (125-202)||(21821814-21821891)
chr7 (127-204)||(29469611-29469688)
chr7 (125-204)||(32879613-32879693)
chr7 (128-204)||(44874348-44874424)
chr7 (131-202)||(2544220-2544291)
chr7 (125-204)||(3038083-3038162)
chr7 (127-202)||(10903093-10903168)
chr7 (125-204)||(15317558-15317637)
chr7 (125-200)||(31892397-31892472)
chr7 (127-202)||(36206064-36206139)
chr7 (125-155)||(4886384-4886414)
chr7 (124-202)||(6634863-6634941)
chr7 (125-155)||(10882238-10882268)
chr7 (124-154)||(22574891-22574921)
chr7 (125-155)||(40121923-40121953)
chr7 (125-155)||(43688159-43688189)
chr7 (122-155)||(7786250-7786283)
chr7 (131-204)||(8075865-8075938)
chr7 (127-204)||(20305664-20305741)
chr7 (125-202)||(34027635-34027712)
chr7 (123-204)||(40898712-40898793)
chr7 (128-204)||(3392988-3393064)
chr7 (127-155)||(31257268-31257296)
chr7 (124-204)||(40746031-40746111)
[»] scaffold0005 (2 HSPs)
scaffold0005 (122-158)||(288653-288689)
scaffold0005 (127-155)||(56514-56542)
[»] scaffold0519 (2 HSPs)
scaffold0519 (125-204)||(1922-2001)
scaffold0519 (125-204)||(2157-2236)
[»] scaffold0129 (1 HSPs)
scaffold0129 (125-204)||(14309-14388)
[»] scaffold0048 (2 HSPs)
scaffold0048 (125-155)||(81897-81927)
scaffold0048 (122-155)||(82131-82164)
[»] scaffold0041 (1 HSPs)
scaffold0041 (123-204)||(67491-67572)


Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 4161722 - 4161930
Alignment:
Q  2 catgttctcttctttgcctatgagatccatccacatgtgaatttctaatctaaaaattgaaaatacagatatcatgattttacatatataaattttttaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4161722 catgttctcttctttgcctatgagatccatccacatgtgaatttctaatctgaaaattgaaaatacagatatcatgattttacatatataaattttttaa 4161821  T
Q  102 aattccatcagacatataccaactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaa 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||| |||||||||| ||||||||||| |||    
T  4161822 aataccatcagacatataccaactcttagaaatcgtggttgggcctaacacaaccccacaaaactggattgtgtggtgaagattccccccgacttagaaa 4161921  T
Q  201 cacaggttc 209  Q
    |||| ||||    
T  4161922 cacatgttc 4161930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 4223342 - 4223550
Alignment:
Q  2 catgttctcttctttgcctatgagatccatccacatgtgaatttctaatctaaaaattgaaaatacagatatcatgattttacatatataaattttttaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4223342 catgttctcttctttgcctatgagatccatccacatgtgaatttctaatctgaaaattgaaaatacagatatcatgattttacatatataaattttttaa 4223441  T
Q  102 aattccatcagacatataccaactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaa 200  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||||||| |||||||||| ||||||||||| |||    
T  4223442 aataccatcagacatataccaactcttagaaatcgtggttgggcctaacacaaccccacaaaactggattgtgtggtgaagattccccccgacttagaaa 4223541  T
Q  201 cacaggttc 209  Q
    |||| ||||    
T  4223542 cacatgttc 4223550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 4868576 - 4868655
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  4868576 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 4868655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 4868812 - 4868891
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  4868812 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 4868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 9705340 - 9705260
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||| |||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  9705340 ctcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 9705260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 8026472 - 8026397
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  8026472 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 8026397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 21690805 - 21690730
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||| |||||||||||| ||  ||||| || ||||| ||||| |||| |||| |||||||||||    
T  21690805 ttagaaatcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaaca 21690730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 27772797 - 27772722
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||| ||||||||||||||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  27772797 ttagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 27772722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 11721990 - 11721913
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || || || ||||| |||| |||| |||||||||||    
T  11721990 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccccacttataaaca 11721913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 25065093 - 25065170
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||| ||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  25065093 tcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttataaaca 25065170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 33494624 - 33494547
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  33494624 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 33494547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 6054489 - 6054413
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||| |||||||||| |   ||||| || ||||| ||||| |||| |||| |||||||||    
T  6054489 ctcttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaa 6054413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 9705105 - 9705026
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  |  ||||| ||||| |||| |||| |||||||||||||    
T  9705105 tcttagaaatggtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgatgattgcccccacttataaacaca 9705026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 13353286 - 13353207
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  13353286 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 13353207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 27656541 - 27656466
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||| |||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  27656541 ttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaaca 27656466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 30256895 - 30256821
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  30256895 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc-acttataaaca 30256821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 33796411 - 33796332
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  33796411 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 33796332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 30256662 - 30256584
Alignment:
Q  126 cttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||| ||  ||||  || ||||| | ||| |||| |||| | |||||||||||    
T  30256662 cttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgcccccagttataaacaca 30256584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 8566960 - 8567036
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| ||||  ||| |||||||||||||    
T  8566960 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgtccc-acttataaacaca 8567036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 12329949 - 12330022
Alignment:
Q  131 aaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||  |  |||||  | ||||| ||||| |||| |||| |||||||||||||    
T  12329949 aaatcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacaca 12330022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 12330180 - 12330257
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||  |  ||||  || ||||| ||||| | || |||| |||||||||||||    
T  12330180 ttagaaatcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacaca 12330257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 8026687 - 8026659
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  8026687 ttagaaatcgtggttgggcctaacacaac 8026659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 12330292 - 12330320
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  12330292 ttagaaatcgtggttgggcctaacacaac 12330320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 3e-87; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 52215002 - 52215204
Alignment:
Q  2 catgttctcttctttgcctatgagatccatccacatgtgaatttctaatctaaaaattgaaaatacagatatcatgattttacatatataaattttttaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52215002 catgttctcttctttgcctatgagatccatccacatgtgaatttctaatctgaaaattgaaaatacagatatcatgaatttacatatataaattttttaa 52215101  T
Q  102 aattccatcagacatataccaactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaac 201  Q
    |||||||||||||||||||||||| ||||||||||||| |||  |||||||||| ||  |||| ||||||||||||||||||||||||||||||||||||    
T  52215102 aattccatcagacatataccaacttttagaaatcgtggatggatctaacacaaccccacaaaactggattgtgcggtgaagattcccccgacttataaac 52215201  T
Q  202 aca 204  Q
    |||    
T  52215202 aca 52215204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 3169849 - 3169774
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| |||||||||| |||| |||||||||||    
T  3169849 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaaca 3169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 4112539 - 4112618
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||| |||||||||||  || |||||| || ||||| ||||| |||| |||| |||||||||||||    
T  4112539 tcttagaaatcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaacaca 4112618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 4113005 - 4113084
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  4113005 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 4113084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 25713478 - 25713399
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||| ||||||||||||||||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  25713478 tcttagaaatggtggttaggcctaacacaactccacaaaactggcttgtgaggtgacgattgcccccacttataaacaca 25713399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 40079237 - 40079158
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  40079237 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 40079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 42586438 - 42586516
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  |||||||| ||||| ||||| |||| |||| ||||||| |||||    
T  42586438 tcttagaaatcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattgcccc-acttatatacaca 42586516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 26177228 - 26177150
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||| || || ||||| |||| |||| ||||||||||||    
T  26177228 tcttagaaatcgtggttgggcctaacacaaccccacaaaactggtttttgaggtgaggattgcccccacttataaacac 26177150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 17452827 - 17452902
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||| ||||||||||||| ||  ||||  || ||||| |||||||||| |||| |||||||||    
T  17452827 tcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaa 17452902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 38668210 - 38668131
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| ||| |||||||||||||||| ||  |||||||| ||||| | ||| |||| |||| |||||||||||||    
T  38668210 tcttagaaattgtgattgggcctaacacaaccccacaaaattggcttgtgagatgatgattgcccccacttataaacaca 38668131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 51589889 - 51589814
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||| || ||||| ||||| |||| |||  |||||||||||    
T  51589889 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttataaaca 51589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 17452680 - 17452753
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||    
T  17452680 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 17452753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 30369920 - 30369843
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||||| ||  |||| |   ||||| ||||| |||| |||| |||||||||||    
T  30369920 tcttagaaatcgtggttgggcctaacacaaccccacaaaactatcttgtgaggtgaggattgcccctacttataaaca 30369843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 49143043 - 49142954
Alignment:
Q  120 ccaactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    |||| |||||||||| |||||||||| ||||||||  ||  |||||||| ||||| | ||| |||| |||| ||||||||||||| ||||    
T  49143043 ccaagtcttagaaatggtggttgggcataacacaatcccacaaaattggcttgtgagctgaggattgcccccacttataaacacatgttc 49142954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 31181512 - 31181596
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    |||||||| | |||||||||||||||||||| || |||||   | ||||| ||||| |||| |||| ||||||||||||| ||||    
T  31181512 tcttagaatttgtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaacacatgttc 31181596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 35772349 - 35772270
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || || || ||| | |||| |||| |||||||||||||    
T  35772349 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacaca 35772270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 20208228 - 20208258
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  20208228 tcttagaaatcgtggttgggcctaacacaac 20208258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 20208527 - 20208557
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  20208527 tcttagaaatcgtggttgggcctaacacaac 20208557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 25255396 - 25255366
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  25255396 tcttagaaatcgtggttgggcctaacacaac 25255366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 29266038 - 29266008
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  29266038 tcttagaaatcgtggttgggcctaacacaac 29266008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 33156818 - 33156788
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  33156818 tcttagaaatcgtggttgggcctaacacaac 33156788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 35772114 - 35772084
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  35772114 tcttagaaatcgtggttgggcctaacacaac 35772084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 39348352 - 39348429
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    |||||||||||||| |||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| ||||||||||||    
T  39348352 tcttagaaatcgtg-ttgggcctaacacaaccccacaaaaccggtttgtgaggtgaggattgcccccacttataaacac 39348429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 155
Target Start/End: Original strand, 4098403 - 4098432
Alignment:
Q  126 cttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||||||||||||||||||||||||||    
T  4098403 cttagaaatcgtggttgggcctaacacaac 4098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 2859389 - 2859421
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||| ||||||||||||||||||||    
T  2859389 actcttagaaatggtggttgggcctaacacaac 2859421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 42351859 - 42351943
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    ||||||||||| |||||||||| |||||||| ||  |||| ||| ||||| ||||| |||  || | ||||||||||||| ||||    
T  42351859 tcttagaaatcatggttgggcccaacacaacaccacaaaactggcttgtgaggtgaggatggcctccacttataaacacatgttc 42351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 52650769 - 52650849
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||  ||||||||||||||||||| ||  ||||   | ||||| ||||| |||| |||| |||||||||||||    
T  52650769 ctcttagaaattatggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacaca 52650849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 3e-16; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 17352667 - 17352746
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||| ||||||| ||| ||| |||||||| ||||| |||||||||| |||| |||||||||||||    
T  17352667 tcttagaaatggtggttggacctaacataaccccgcaaaattggcttgtgaggtgaagattacccccacttataaacaca 17352746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 41666754 - 41666835
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  41666754 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 41666835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 24531684 - 24531605
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||| ||||||||| ||  ||||| || ||||| ||||| |||| |||| |||||||||||||    
T  24531684 tcttagaaatcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacaca 24531605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 41666992 - 41667071
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  41666992 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 41667071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 20510641 - 20510718
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||| |||||||||||||||||||  |||| ||| || || ||||| |||| |||| |||||||||||    
T  20510641 tcttagaaatcgtgtttgggcctaacacaactccacaaaactggtttttgaggtgaggattgcccccacttataaaca 20510718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 19705989 - 19705909
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||||||  ||||  || || |  ||||| |||| |||| |||||||||||||    
T  19705989 ctcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttataaggtgaggattgcccccacttataaacaca 19705909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 13296757 - 13296683
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||    
T  13296757 tcttagaaatcgtggttgggcctaacacaac-ccacaaaactggcttgtgaggtgaggattgcccccacttataaa 13296683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 24346500 - 24346579
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| ||||||| |||||||||||| || |||||  || ||||| ||||| |||| |||| |||||||||||||    
T  24346500 tcttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacaca 24346579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 24528625 - 24528546
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| ||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  24528625 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 24528546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 18333455 - 18333543
Alignment:
Q  116 tataccaactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||| || |||||||| | |||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  18333455 tatacaaattcttagaatttgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacaca 18333543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 18333698 - 18333778
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaacaca 204  Q
    |||||||| |||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| ||||| |||||||||||||    
T  18333698 tcttagaattcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgacgattaccccccacttataaacaca 18333778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 7607677 - 7607602
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||| ||||||||||||||||||||||  ||||  || ||||| ||||||||||  | | |||||||||||    
T  7607677 ttagaaatcatggttgggcctaacacaactccacaaaaccggcttgtgaggtgaagattgtctccacttataaaca 7607602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 15439072 - 15438993
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||| ||||||||||| ||||||||||||| || ||||| ||  ||||| ||||| |||| |||| ||||||| |||||    
T  15439072 tcttataaatcgtggttaggcctaacacaaccccataaaactgacttgtgaggtgatgattgcccccacttatagacaca 15438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 15480407 - 15480328
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||| ||| ||  ||||   | ||||| ||||| |||| |||| |||||||||||||    
T  15480407 tcttagaaatcgtggttgggcctaacagaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacaca 15480328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 24269870 - 24269948
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| ||||||| |||||||||||| || |||||  || ||||| ||||| |||| |||| |||||||||||||    
T  24269870 tcttagaaattgtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccc-acttataaacaca 24269948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 27132994 - 27133069
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||  |||||||||||    
T  27132994 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaaca 27133069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 38977018 - 38976939
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||| |||||||||| ||||  ||||  || ||||| ||||| ||||  ||| |||||||||||||    
T  38977018 tcttagaaatcgtggttgtgcctaacacacctccacaaaaccggtttgtgaggtgaggattgtcccaacttataaacaca 38976939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 2063733 - 2063763
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  2063733 tcttagaaatcgtggttgggcctaacacaac 2063763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 12034775 - 12034697
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    ||||||||||||||||||||||||||||||  |   |||| ||| ||||| ||||| |||| |||| | ||||||||||    
T  12034775 tcttagaaatcgtggttgggcctaacacaatcctacaaaactggcttgtgaggtgaggatttcccccatttataaacac 12034697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 25258093 - 25258123
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  25258093 tcttagaaatcgtggttgggcctaacacaac 25258123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 25321883 - 25321913
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  25321883 tcttagaaatcgtggttgggcctaacacaac 25321913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 28510176 - 28510146
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  28510176 tcttagaaatcgtggttgggcctaacacaac 28510146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 35167391 - 35167473
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| |||||||||||||||||||||| ||  ||| | || ||||| | ||  |||| |||| |||||||||||||    
T  35167391 aactcttagaagtcgtggttgggcctaacacaaccccacaaattcggtttgtgagatggggattgccccaacttataaacaca 35167473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 29909722 - 29909795
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    |||||||| |||||||||||||||||||||||  ||||  || ||||| ||||| |||| || | |||||||||    
T  29909722 ttagaaatggtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcctccacttataaa 29909795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 8081112 - 8081192
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaacaca 204  Q
    ||||||||||| ||||||||||||||||||| ||  ||||  || ||||| | ||| |||| ||||| |||||||||||||    
T  8081112 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccccacttataaacaca 8081192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 17016398 - 17016426
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  17016398 ttagaaatcgtggttgggcctaacacaac 17016426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 24647778 - 24647702
Alignment:
Q  128 tagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||| ||||||||||||||  ||||  || ||||| ||||| |||| || | | |||||||||||    
T  24647778 tagaaatcgtggttggacctaacacaactccacaaaaccggcttgtgaggtgaggattgccaccagttataaacaca 24647702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 35788744 - 35788665
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| || |||||  || ||||| ||||| |||| |||| |||||||||||||    
T  35788744 tcttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacaca 35788665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 22845444 - 22845525
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  22845444 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacaca 22845525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 22863560 - 22863480
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  22863560 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacaca 22863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 6218524 - 6218445
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||| ||||||||||| ||| |||||  || ||||| ||||| |||| |||| |||||||||||||    
T  6218524 tcttagaaatcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaacaca 6218445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 9685715 - 9685640
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| || |||||  || ||||| ||||| |||| |||| |||||||||||    
T  9685715 ttagaaatcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaaca 9685640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 50543566 - 50543645
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||||||  ||||  || ||||| ||||| |||| |||| ||||||| |||||    
T  50543566 tcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttatacacaca 50543645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 35788980 - 35788900
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||| ||  ||||  || ||||| | ||| |||| |||| |||||||||||||    
T  35788980 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacaca 35788900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 11036510 - 11036589
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| ||||||||| |||||||||| ||| ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  11036510 tcttagaaattgtggttgggtctaacacaaccccgcaaaaccggcttgtgaggtgatgattgccccaacttataaacaca 11036589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 21498878 - 21498803
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  21498878 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 21498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 22231307 - 22231382
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||    
T  22231307 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 22231382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 50543329 - 50543408
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| ||||||| |||||    
T  50543329 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttatacacaca 50543408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 52559652 - 52559573
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| ||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  52559652 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacaca 52559573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 22827623 - 22827545
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    ||||||||||||||||||||||||||||||| |   ||||  || ||||| ||||| |||| |||| ||||||||||||    
T  22827623 tcttagaaatcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacac 22827545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 6218289 - 6218212
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||||| | |||||||||||||  ||||  |  ||||| |||||||||| |||| |||||||||||    
T  6218289 tcttagaaatcgtggttgtgtctaacacaactccacaaaaccgtcttgtgaggtgaagattgcccccacttataaaca 6218212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 28245527 - 28245604
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| ||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  28245527 ttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 28245604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 53828522 - 53828599
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| |||||||||||||||||||| ||  ||||| || || || ||||| |||| |||| |||||||||||    
T  53828522 tcttagaaattgtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaaca 53828599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 21498437 - 21498362
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||| ||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  21498437 ttagaaatcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 21498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 25052935 - 25052860
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||  |||| |||| |||||||||||    
T  25052935 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgcggattacccccacttataaaca 25052860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 39902562 - 39902641
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||   | ||||| ||||| |||| |||| |||||||||||||    
T  39902562 tcttagaaatggtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacaca 39902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 12869262 - 12869292
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  12869262 tcttagaaatcgtggttgggcctaacacaac 12869292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 17111648 - 17111618
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  17111648 tcttagaaatcgtggttgggcctaacacaac 17111618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 40717440 - 40717470
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  40717440 tcttagaaatcgtggttgggcctaacacaac 40717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 53559289 - 53559319
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  53559289 tcttagaaatcgtggttgggcctaacacaac 53559319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 1518249 - 1518172
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||| ||||||||||||| ||  ||||  || ||||| | ||| |||| |||| |||||||||||    
T  1518249 tcttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgcccccacttataaaca 1518172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 7926646 - 7926613
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||| |||||||||||||||||||    
T  7926646 aactcttagaaatcatggttgggcctaacacaac 7926613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 12869020 - 12869105
Alignment:
Q  117 ataccaactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||| |||||||||||||||| |||  |||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  12869020 atacaaactcttagaaatcgtagtttagcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaaca 12869105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 35796976 - 35797053
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| || ||||||| ||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||||    
T  35796976 tcttagaaatggtagttgggcttaacacaaccccacaaaactggtttgtgaggtgaggattgcccccacttataaaca 35797053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 154
Target Start/End: Complemental strand, 40726806 - 40726777
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaa 154  Q
    ||||||||||||||||||||||||||||||    
T  40726806 tcttagaaatcgtggttgggcctaacacaa 40726777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 53828288 - 53828365
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| ||| |||||||||||||||| ||  ||||| || || || ||||| |||| |||| |||||||||||    
T  53828288 tcttagaaattgtgattgggcctaacacaaccccacaaaatcggtttatgaggtgaggattgcccccacttataaaca 53828365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 9685481 - 9685453
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  9685481 ttagaaatcgtggttgggcctaacacaac 9685453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 14783188 - 14783216
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  14783188 ttagaaatcgtggttgggcctaacacaac 14783216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 53814670 - 53814702
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaa 154  Q
    |||| ||||||||||||||||||||||||||||    
T  53814670 aactattagaaatcgtggttgggcctaacacaa 53814702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 54054806 - 54054834
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  54054806 ttagaaatcgtggttgggcctaacacaac 54054834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 31317551 - 31317472
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||| ||||| || ||||| ||||| ||||  ||| |||||||||||||    
T  31317551 tcttagaaatcgtggttgggcctaacacaaccccgcaaaatcggcttgtgaggtgatgattttccccacttataaacaca 31317472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 35038193 - 35038272
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  35038193 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacaca 35038272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 54368601 - 54368522
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||| |||||||||| || |||||  || ||||| ||||| |||| |||| |||||||||||||    
T  54368601 tcttagaaatcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacaca 54368522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 54567977 - 54567898
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  54567977 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacaca 54567898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 1723075 - 1723152
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  1723075 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 1723152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 13574922 - 13574999
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||| |||||||||||||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  13574922 ttagaaattgtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggatttcccccacttataaacaca 13574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 33205547 - 33205466
Alignment:
Q  128 tagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    |||||||||||||||||||||||||||| ||| |||| ||| ||||| ||||| |||| |||  || |||||||||| ||||    
T  33205547 tagaaatcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgcccttacatataaacacatgttc 33205466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 11589868 - 11589793
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  11589868 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 11589793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 4155409 - 4155331
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || || || ||||| |||| |||| ||||||||||||    
T  4155409 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgcccccacttataaacac 4155331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 37246665 - 37246721
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtga 180  Q
    |||||||||||||||||||| |||||||||| ||| |||||| || ||||| |||||    
T  37246665 ctcttagaaatcgtggttggacctaacacaattccataaaatcggtttgtgaggtga 37246721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 41915255 - 41915172
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    |||||||| | |||||||||||||||||||  || ||||| ||| ||||| ||||| |||| |||| ||||||||||||| ||||    
T  41915255 tcttagaatttgtggttgggcctaacacaaa-ccataaaactggtttgtgaggtgaggattgcccccacttataaacacatgttc 41915172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 16239676 - 16239597
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||  ||  ||||  || ||||| ||||| | || |||| |||||||||||||    
T  16239676 tcttagaaatcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacaca 16239597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 20327850 - 20327925
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||| ||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  20327850 ttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 20327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 45828330 - 45828247
Alignment:
Q  126 cttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    |||||||||| ||||||||||||||||||| ||  ||||   | ||||| |||| ||||| |||| ||||||||||||| ||||    
T  45828330 cttagaaatcatggttgggcctaacacaaccccacaaaacctgcttgtgaggtggagattgcccccacttataaacacatgttc 45828247  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 4155644 - 4155614
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  4155644 tcttagaaatcgtggttgggcctaacacaac 4155614  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 17638319 - 17638289
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  17638319 tcttagaaatcgtggttgggcctaacacaac 17638289  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 24866282 - 24866252
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  24866282 tcttagaaatcgtggttgggcctaacacaac 24866252  T

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Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 27086726 - 27086696
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  27086726 tcttagaaatcgtggttgggcctaacacaac 27086696  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 50052540 - 50052618
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||| ||  ||||  || |||||  |||| |||| ||||| |||||||||||||    
T  50052540 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgccccccacttataaacaca 50052618  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 8019053 - 8018976
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||| ||||| |||| | || |||||||||||    
T  8019053 tcttagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcacccacttataaaca 8018976  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 18757930 - 18757897
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||| ||||||||||||||||||||||||||    
T  18757930 aactcttggaaatcgtggttgggcctaacacaac 18757897  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 20327619 - 20327688
Alignment:
Q  131 aaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||    
T  20327619 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaa 20327688  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 27086675 - 27086642
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactcc 158  Q
    ||||||||||| ||||||||||||||||||||||    
T  27086675 tcttagaaatcatggttgggcctaacacaactcc 27086642  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 43781669 - 43781636
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactc 157  Q
    ||||||||||| ||||||||||||||||||||||    
T  43781669 ctcttagaaattgtggttgggcctaacacaactc 43781636  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 472058 - 472138
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||| |||||||||||| ||||||||||||| ||  ||||  || ||||| ||| | |||| |||| |||||||||||||    
T  472058 ctctttgaaatcgtggtttggcctaacacaaccccacaaaaccggcttgtgaggtaaggattgcccccacttataaacaca 472138  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 21833431 - 21833403
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  21833431 ttagaaatcgtggttgggcctaacacaac 21833403  T

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Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 47702410 - 47702438
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  47702410 ttagaaatcgtggttgggcctaacacaac 47702438  T

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Target: scaffold0766 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 6362 - 6280
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||| ||||||||||||||||||||||||||| ||  ||||| || ||||| ||||| |||| |||| |||||||||||||    
T  6362 aactctaagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacaca 6280  T

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Target: scaffold0766; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 6427 - 6394
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||||||||||||||||||||||||||||||    
T  6427 aactcttagaaatcgtggttgggcctaacacaac 6394  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 16419590 - 16419508
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  16419590 aactcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 16419508  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 25082533 - 25082615
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||| ||||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  25082533 aactcttagaaatcgtggttggacctaacacaaccccacaaaactggcttgtgaggtgatgattgcccctacttataaacaca 25082615  T

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Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 204
Target Start/End: Original strand, 40379205 - 40379287
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  40379205 aactcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 40379287  T

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Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 28407792 - 28407869
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||||||||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  28407792 tcttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 28407869  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 19570970 - 19571057
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    ||||||||||||||||||||||||||||||||| |||  ||||| |  || || ||||| |||| |||| ||||||||||||| ||||    
T  19570970 aactcttagaaatcgtggttgggcctaacacaattccacaaaatcgacttatgaggtgaggattgcccccacttataaacacatgttc 19571057  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 40379443 - 40379522
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  40379443 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 40379522  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 5711438 - 5711517
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  5711438 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacaca 5711517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 33606288 - 33606367
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||| |||||||| ||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  33606288 tcttagaaatcgtggttgtgcctaacataacgccacaaaactggcttgtgaggtgaggattacccccacttataaacaca 33606367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 32356469 - 32356392
Alignment:
Q  126 cttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||| |||| ||||||||||||||||||||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  32356469 cttagaattcgtagttgggcctaacacaactccacaaaactggcttgtg-ggtgaggattgcccccacttataaacaca 32356392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 17719652 - 17719575
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaac 201  Q
    |||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||| | |||| |||| ||||||||||    
T  17719652 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggtttgtgaggtcaggattgcccccacttataaac 17719575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 21591866 - 21591789
Alignment:
Q  126 cttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaaca 202  Q
    |||||||||||||||||||||||||||||| || |||||  |  || || |||||||||| ||||| |||||||||||    
T  21591866 cttagaaatcgtggttgggcctaacacaaccccataaaaccgacttatgaggtgaagattgccccccacttataaaca 21591789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 2029854 - 2029775
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||| ||||| ||  ||||  || ||||| ||||| |||| || | |||||||||||||    
T  2029854 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacaca 2029775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 2030089 - 2030010
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||| ||||| ||  ||||  || ||||| ||||| |||| || | |||||||||||||    
T  2030089 tcttagaaatcgtggttgggcctaaaacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttataaacaca 2030010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 2324319 - 2324248
Alignment:
Q  131 aaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  2324319 aaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 2324248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 15124782 - 15124861
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||| |||||||||| ||  ||||  | ||||||  ||||||||| |||  |||||||||||||    
T  15124782 tcttagaaatcgtggttgggtctaacacaaccccacaaaaccgaattgtgaagtgaagattgccctcacttataaacaca 15124861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 19191611 - 19191686
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| ||||  ||| |||||||||||    
T  19191611 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgtccccacttataaaca 19191686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 93626 - 93656
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  93626 tcttagaaatcgtggttgggcctaacacaac 93656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 8424971 - 8424898
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    |||||||||||||||| || ||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||    
T  8424971 ttagaaatcgtggttgagcttaacacaaccccacaaaactggtttgtgaggtgatgattgcccccacttataaa 8424898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 31700744 - 31700773
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaa 154  Q
    ||||||||||||||||||||||||||||||    
T  31700744 tcttagaaatcgtggttgggcctaacacaa 31700773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 202
Target Start/End: Original strand, 37769938 - 37770019
Alignment:
Q  121 caactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||| ||| |||||||||||||| |||||||||| ||  ||||  || || || |||||||||| |||| |||||||||||    
T  37769938 caactattaaaaatcgtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgcccccacttataaaca 37770019  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 40149004 - 40149081
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||| ||||||| ||||||||||| ||  ||||| || ||||| ||||| ||||  ||| |||||||||||||    
T  40149004 ttagaaatcatggttggacctaacacaaccccacaaaatcggcttgtgaggtgaggattgtccccacttataaacaca 40149081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 2324554 - 2324482
Alignment:
Q  130 gaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||| |||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  2324554 gaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 2324482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 24395949 - 24395870
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||| ||||||||||||| ||  ||||| |  ||||| ||||| |||| |||| ||| |||||||||    
T  24395949 ctcttagaaatcgtggtttggcctaacacaaccccacaaaatcgatttgtgaggtgaggattgcccc-actcataaacaca 24395870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 29718412 - 29718336
Alignment:
Q  126 cttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||| ||||||||||||| ||  ||||  || ||||| ||||| |||| |||  |||||||||||    
T  29718412 cttagaaatcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttataaaca 29718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 5753 - 5832
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||| ||||  || ||||| | ||| |||| |||| |||||||||||||    
T  5753 tcttagaaatcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacaca 5832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 5543 - 5622
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||  ||||||||||||||||||| ||| ||||  || |||||  |||| |||| |||| |||||||||||||    
T  5543 tcttagaaattatggttgggcctaacacaaccccgcaaaaccggcttgtgaagtgaggattgcccccacttataaacaca 5622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 39743612 - 39743537
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||| || ||||| ||||| |||| |||| |||||||||||    
T  39743612 ttagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaaca 39743537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 28213105 - 28213181
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||| |||| || | |||||||||||||    
T  28213105 ttagaaatcgtggttgggcctaacacaaccccgccaaattggcttgtgaggtgaggattgccgc-acttataaacaca 28213181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 39960279 - 39960199
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| ||||| |||||||||||    
T  39960279 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccccacttataaaca 39960199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 8084212 - 8084137
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    |||||||||||||||||||| |||||||||||||| ||||   | ||||| ||||| |||| |||| |||||||||    
T  8084212 tcttagaaatcgtggttgggtctaacacaactccgcaaaaccagcttgtgaggtgaggattgcccccacttataaa 8084137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 15042669 - 15042748
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||| |||||||||||| ||  ||||| || ||| | ||||| |||| |||| |||||||||||||    
T  15042669 tcttagaaatcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaacaca 15042748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 19256587 - 19256662
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  19256587 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 19256662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 24075307 - 24075382
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  24075307 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 24075382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 24532420 - 24532499
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| ||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  24532420 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacaca 24532499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 25325731 - 25325652
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||| ||||||||  |||| ||| ||||| || || |||| | || |||||||||||||    
T  25325731 tcttagaaatcgtggttgggcctaaaacaactccacaaaactggcttgtgaggagaggattgcacccacttataaacaca 25325652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 35682780 - 35682859
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||| | ||||| |||| |||| |||||||||||||    
T  35682780 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacaca 35682859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 39052928 - 39053007
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||| ||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  39052928 tcttagaaatcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 39053007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 22638178 - 22638256
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    ||||||||||||||||||||| ||||||||| ||  ||||  || ||||| ||||| |||| |||| ||||||||||||    
T  22638178 tcttagaaatcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttataaacac 22638256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 37001311 - 37001233
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacac 203  Q
    |||| |||||||||||||||||||||||||||||  ||||  || ||||| ||||| |||| |||| || |||||||||    
T  37001311 tctttgaaatcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacctataaacac 37001233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 10884149 - 10884070
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| ||||| |||||||||||||    
T  10884149 tcttagaaatcgtggttgggcctaacacaac-ccacaaaaccggcttgtgaggtgaggattgccccccacttataaacaca 10884070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 12547184 - 12547109
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    |||||||||||||| ||||||||||||||||| ||  ||||  || ||||| |||||||||| |||| |||||||||    
T  12547184 ctcttagaaatcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccc-acttataaa 12547109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 11232193 - 11232272
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  11232193 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 11232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 11232428 - 11232507
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  11232428 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 11232507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 12317131 - 12317052
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||  ||  |||||  | || || ||||| |||| |||| |||||||||||||    
T  12317131 tcttagaaatcgtggttgggcctaacacaatcccacaaaatcagcttatgaggtgaggattgcccccacttataaacaca 12317052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 17469901 - 17469826
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||| |||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  17469901 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 17469826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 17477148 - 17477073
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||| |||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  17477148 ttagaaatcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 17477073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 19256821 - 19256896
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||   | ||||| ||||| |||| |||| |||||||||||    
T  19256821 ttagaaatcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaaca 19256896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 20301346 - 20301267
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||  |  ||||  || ||||| ||| | |||| |||| |||||||||||||    
T  20301346 tcttagaaatcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacaca 20301267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 21087978 - 21087899
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||||||||||||||  |  ||||  || ||||| ||| | |||| |||| |||||||||||||    
T  21087978 tcttagaaatcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacaca 21087899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 155
Target Start/End: Complemental strand, 27205246 - 27205215
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||||||||||||||||||||||||||||    
T  27205246 ctcttagaaatcgtggttgggcctaacacaac 27205215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 4828375 - 4828301
Alignment:
Q  128 tagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||| |||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  4828375 tagaaattgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 4828301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 8084450 - 8084372
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    |||||||||||||||||||||| |||||||||||  |  |||| ||| ||||| ||||| | || |||| |||||||||    
T  8084450 aactcttagaaatcgtggttggacctaacacaacctcacaaaactggtttgtgaggtgaggtttacccccacttataaa 8084372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 18939295 - 18939373
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||| ||||||||||||||||||||  |  |||||  | ||||| ||||| |||| |||| |||||||||||    
T  18939295 ctcttagaaatggtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaaca 18939373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 20301592 - 20301562
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  20301592 tcttagaaatcgtggttgggcctaacacaac 20301562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 21088224 - 21088194
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  21088224 tcttagaaatcgtggttgggcctaacacaac 21088194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 27205049 - 27205019
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  27205049 tcttagaaatcgtggttgggcctaacacaac 27205019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 27205147 - 27205117
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  27205147 tcttagaaatcgtggttgggcctaacacaac 27205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 37001549 - 37001519
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  37001549 tcttagaaatcgtggttgggcctaacacaac 37001519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 41790743 - 41790713
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  41790743 tcttagaaatcgtggttgggcctaacacaac 41790713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 42846604 - 42846634
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  42846604 tcttagaaatcgtggttgggcctaacacaac 42846634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 10450088 - 10450055
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||||||||||||||||| ||||||||||||    
T  10450088 aactcttagaaatcgtggttgagcctaacacaac 10450055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 10454514 - 10454481
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||||||||||||||||| ||||||||||||    
T  10454514 aactcttagaaatcgtggttgagcctaacacaac 10454481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 28069358 - 28069431
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    |||||||||||||||||  |||||||||||||  |||||  | ||||| ||||| |||| |||| |||||||||    
T  28069358 ttagaaatcgtggttggatctaacacaactccacaaaatcagtttgtgaggtgaggattgcccccacttataaa 28069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Original strand, 3157324 - 3157356
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||| ||||||||||||||||||||    
T  3157324 actcttagaaatggtggttgggcctaacacaac 3157356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 10614938 - 10615022
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacacaggttc 209  Q
    ||||| |||||||||||| |||||| ||||| ||  ||||| || ||||| |||||||||| |||| | || |||||||| ||||    
T  10614938 tcttataaatcgtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagattacccccatttgtaaacacatgttc 10615022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 34653233 - 34653205
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  34653233 ttagaaatcgtggttgggcctaacacaac 34653205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 25620221 - 25620142
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  25620221 tcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 25620142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 33996310 - 33996385
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||||||||||||||||  ||||  |  ||||| |||||||||| |||| |||||||||    
T  33996310 tcttagaaatcgtggttgggcctaacacaactccacaaaaccgacttgtgaggtgaagattgcccccacttataaa 33996385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 47710528 - 47710449
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  47710528 tcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacaca 47710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 47722184 - 47722105
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  |||| ||| ||||| ||||| |||| |||| |||||||||||||    
T  47722184 tcttagaaatggtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacaca 47722105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 29469923 - 29469846
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||||||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  29469923 ttagaaatcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 29469846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 21861615 - 21861535
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| |||||||||||||||||||| ||  ||||| || ||||  ||||| |||| |||| |||||||||||||    
T  21861615 ctcttagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacaca 21861535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 31257032 - 31257107
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||| | |||||||||| ||  |||| ||| ||||| |||||||||| |||| |||||||||||    
T  31257032 ttagaaatcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgcccccacttataaaca 31257107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 34027476 - 34027401
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  34027476 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 34027401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 36277225 - 36277304
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||||||||||||| |||||||||| ||  ||||| |  ||||| ||||| |||| |||| |||||||||||||    
T  36277225 tcttagaaatcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacaca 36277304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 48243060 - 48243139
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||| ||||||||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||||    
T  48243060 tcttacaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca 48243139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 21054952 - 21055029
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  21054952 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaaca 21055029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 21821891 - 21821814
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    ||||||||||||||||||||||||||||||  ||  ||||| || ||||| | |||||||| |||| |||||| ||||    
T  21821891 tcttagaaatcgtggttgggcctaacacaatcccacaaaatcggtttgtgagatgaagattgcccccacttattaaca 21821814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 29469688 - 29469611
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  29469688 ttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 29469611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 32879613 - 32879693
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagatt-cccccgacttataaacaca 204  Q
    |||||||| |||| ||||||||||||||||| ||| ||||  || ||||| ||||| |||| ||||| |||||||||||||    
T  32879613 tcttagaagtcgtcgttgggcctaacacaaccccgcaaaaccggcttgtgaggtgaggattgccccccacttataaacaca 32879693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 44874348 - 44874424
Alignment:
Q  128 tagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||||||||||||||||||     ||||| || ||||| ||||| |||| |||| |||||||||||||    
T  44874348 tagaaatcgtggttgggcctaacacaaccatacaaaatcggtttgtgaggtgaggatttcccccacttataaacaca 44874424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 2544220 - 2544291
Alignment:
Q  131 aaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||| |||||||||||||| ||  |||| ||| ||||  |||||||||| |||| |||||||||||    
T  2544220 aaatcgtggtagggcctaacacaaccccacaaaactggcttgtaaggtgaagattgcccccacttataaaca 2544291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 3038083 - 3038162
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| ||||||||||||||||||| ||  ||||  || |||||  |||| |||| |||| |||||||||||||    
T  3038083 tcttagaaatcatggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacaca 3038162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 10903168 - 10903093
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||| ||||||||||||| |||||||||||||  ||||  || ||||| ||||| |||| |||| |||||||||||    
T  10903168 ttagtaatcgtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggattacccctacttataaaca 10903093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 15317637 - 15317558
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||  ||||||||||||||||||| ||  |||| | | ||||| ||||| |||| |||| |||||||||||||    
T  15317637 tcttagaaattatggttgggcctaacacaacaccacaaaactagtttgtgaggtgaggattgcccccacttataaacaca 15317558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 31892472 - 31892397
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaa 200  Q
    ||||||||||||||||||||||||||||| | ||  ||||  || ||||| ||||||||||  ||| |||||||||    
T  31892472 tcttagaaatcgtggttgggcctaacacatccccacaaaaccggcttgtgaggtgaagattgtccccacttataaa 31892397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 36206064 - 36206139
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||||| |||||| ||||| || |||||  || ||||| |||||||||| || | |||||||||||    
T  36206064 ttagaaatcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcctccacttataaaca 36206139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 4886414 - 4886384
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  4886414 tcttagaaatcgtggttgggcctaacacaac 4886384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 6634941 - 6634863
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||| ||||||||||||||||||| ||  |||| | | || || ||||| |||| |||| |||||||||||    
T  6634941 ctcttagaaatcatggttgggcctaacacaaccccacaaaactagcttatgaggtgaggattgcccccacttataaaca 6634863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 10882238 - 10882268
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  10882238 tcttagaaatcgtggttgggcctaacacaac 10882268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 154
Target Start/End: Complemental strand, 22574921 - 22574891
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaa 154  Q
    |||||||||||||||||||||||||||||||    
T  22574921 ctcttagaaatcgtggttgggcctaacacaa 22574891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 40121923 - 40121953
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  40121923 tcttagaaatcgtggttgggcctaacacaac 40121953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 43688159 - 43688189
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  43688159 tcttagaaatcgtggttgggcctaacacaac 43688189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 7786250 - 7786283
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||| |||||||||||||||||||    
T  7786250 aactcttagaaatcatggttgggcctaacacaac 7786283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 8075938 - 8075865
Alignment:
Q  131 aaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||||| ||| |||||||||| |||||  |  ||||| ||||||||||  ||| |||||||||||||    
T  8075938 aaatcgtggttggacctgacacaactccataaaaccgacttgtgaggtgaagattatccccacttataaacaca 8075865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 20305664 - 20305741
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||| ||||| ||||||||||||| ||  |||||  | ||||| ||||| |||| |||| |||||||||||||    
T  20305664 ttagaaatcatggttaggcctaacacaaccccacaaaataagtttgtgaggtgaggattgcccccacttataaacaca 20305741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 34027712 - 34027635
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaaca 202  Q
    |||||||||||||| |||||||||||||||| ||  ||||  || |||||  |||| |||| |||| |||||||||||    
T  34027712 tcttagaaatcgtgattgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgcccccacttataaaca 34027635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 40898712 - 40898793
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||| |||| |||||||| || |||||||||||  ||||| || ||||  ||||| |||| |||| |||||||||||||    
T  40898712 actcttaaaaattgtggttggaccaaacacaactccacaaaatcggtttgtaaggtgaggattgcccccacttataaacaca 40898793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 3393064 - 3392988
Alignment:
Q  128 tagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||| |||||||||||||||||||| ||  ||||| || ||||| |||||  |||  ||| |||||||||||||    
T  3393064 tagaaatggtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattttccccacttataaacaca 3392988  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Original strand, 31257268 - 31257296
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  31257268 ttagaaatcgtggttgggcctaacacaac 31257296  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 40746031 - 40746111
Alignment:
Q  124 ctcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||||| ||||||||| |||||||||  ||  ||||| || ||||| ||||||||||  |||  ||||||||||||    
T  40746031 ctcttagaaattgtggttgggtctaacacaatcccacaaaatcggtttgtgaggtgaagattgtcccttcttataaacaca 40746111  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 288653 - 288689
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaactcc 158  Q
    |||||||||||||| ||||||||||||||||||||||    
T  288653 aactcttagaaatcatggttgggcctaacacaactcc 288689  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 56542 - 56514
Alignment:
Q  127 ttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||    
T  56542 ttagaaatcgtggttgggcctaacacaac 56514  T

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Target: scaffold0519 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 2001 - 1922
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  2001 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 1922  T

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Target: scaffold0519; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 2236 - 2157
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    |||||||||| |||||||||||||||||||| ||  ||||  || ||||  ||||| |||| |||| |||||||||||||    
T  2236 tcttagaaatggtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacaca 2157  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 14388 - 14309
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||||| ||||||||||||||||||||| ||  ||||  || ||||| ||||| ||||  ||| |||||||||||||    
T  14388 tcttagaaaacgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgtccccacttataaacaca 14309  T

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Target: scaffold0048 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Complemental strand, 81927 - 81897
Alignment:
Q  125 tcttagaaatcgtggttgggcctaacacaac 155  Q
    |||||||||||||||||||||||||||||||    
T  81927 tcttagaaatcgtggttgggcctaacacaac 81897  T

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Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 82164 - 82131
Alignment:
Q  122 aactcttagaaatcgtggttgggcctaacacaac 155  Q
    ||||||||||||| ||||||||||||||||||||    
T  82164 aactcttagaaattgtggttgggcctaacacaac 82131  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 67572 - 67491
Alignment:
Q  123 actcttagaaatcgtggttgggcctaacacaactccgtaaaattggattgtgcggtgaagattcccccgacttataaacaca 204  Q
    ||||||| |||| |||||||| || |||||||||||  ||||| || ||||  ||||| |||| |||| |||||||||||||    
T  67572 actcttaaaaattgtggttggaccaaacacaactccacaaaatcggtttgtaaggtgaggattgcccccacttataaacaca 67491  T

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