View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16755_low_8 (Length: 373)

Name: NF16755_low_8
Description: NF16755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16755_low_8
NF16755_low_8
[»] chr2 (58 HSPs)
chr2 (90-357)||(11883709-11883978)
chr2 (90-357)||(40469429-40469697)
chr2 (90-357)||(30191009-30191277)
chr2 (90-355)||(26737484-26737747)
chr2 (90-357)||(6171158-6171425)
chr2 (90-339)||(17345835-17346086)
chr2 (90-346)||(32672844-32673100)
chr2 (90-349)||(20347165-20347424)
chr2 (160-339)||(40221382-40221562)
chr2 (90-315)||(43495311-43495533)
chr2 (155-315)||(15321517-15321676)
chr2 (267-345)||(15920913-15920991)
chr2 (157-315)||(18055171-18055330)
chr2 (91-201)||(15920781-15920890)
chr2 (90-178)||(24832333-24832421)
chr2 (90-178)||(30190925-30191013)
chr2 (91-178)||(40469693-40469780)
chr2 (90-145)||(11883625-11883680)
chr2 (90-178)||(20347428-20347516)
chr2 (17-85)||(18818944-18819011)
chr2 (90-211)||(6495653-6495773)
chr2 (90-178)||(2639446-2639534)
chr2 (90-178)||(6171421-6171508)
chr2 (90-178)||(26841589-26841677)
chr2 (88-178)||(15321392-15321480)
chr2 (90-138)||(18296697-18296745)
chr2 (90-138)||(26737785-26737833)
chr2 (23-83)||(39730691-39730751)
chr2 (90-178)||(43495570-43495656)
chr2 (22-89)||(18236112-18236179)
chr2 (90-137)||(41790917-41790964)
chr2 (90-178)||(2638822-2638910)
chr2 (90-178)||(18296078-18296166)
chr2 (90-178)||(26842202-26842290)
chr2 (90-138)||(5378663-5378711)
chr2 (91-178)||(7591204-7591291)
chr2 (90-138)||(17850980-17851028)
chr2 (91-178)||(32673107-32673193)
chr2 (90-138)||(37720206-37720254)
chr2 (95-142)||(6324924-6324971)
chr2 (91-138)||(8851151-8851198)
chr2 (90-145)||(18055050-18055103)
chr2 (88-138)||(6325351-6325401)
chr2 (15-89)||(17414966-17415040)
chr2 (93-138)||(26737660-26737706)
chr2 (93-138)||(40469609-40469655)
chr2 (18-83)||(24047627-24047690)
chr2 (90-138)||(5379963-5380011)
chr2 (90-138)||(6495469-6495516)
chr2 (90-138)||(8851586-8851634)
chr2 (267-315)||(11883628-11883675)
chr2 (267-315)||(11883928-11883975)
chr2 (21-89)||(19541274-19541342)
chr2 (17-89)||(24434857-24434929)
chr2 (267-315)||(24832336-24832383)
chr2 (17-89)||(27417067-27417139)
chr2 (90-138)||(40221315-40221362)
chr2 (267-315)||(40469731-40469778)
[»] chr5 (45 HSPs)
chr5 (90-357)||(18433101-18433368)
chr5 (90-357)||(25174935-25175203)
chr5 (90-357)||(25115843-25116113)
chr5 (90-357)||(34576951-34577215)
chr5 (155-357)||(26020536-26020738)
chr5 (159-357)||(5779632-5779830)
chr5 (155-357)||(9665612-9665815)
chr5 (90-250)||(22428936-22429092)
chr5 (90-349)||(5187616-5187882)
chr5 (160-324)||(12441084-12441249)
chr5 (91-315)||(9869563-9869788)
chr5 (90-178)||(18433017-18433105)
chr5 (90-140)||(16466744-16466794)
chr5 (90-178)||(25115759-25115847)
chr5 (90-178)||(25174851-25174939)
chr5 (90-178)||(26020452-26020540)
chr5 (306-357)||(22429142-22429193)
chr5 (15-89)||(20694880-20694954)
chr5 (91-211)||(41382896-41383013)
chr5 (90-178)||(18817575-18817663)
chr5 (159-249)||(23011150-23011240)
chr5 (23-85)||(20083708-20083770)
chr5 (90-141)||(12441314-12441362)
chr5 (90-138)||(12498569-12498617)
chr5 (90-138)||(12498932-12498980)
chr5 (94-138)||(16726084-16726128)
chr5 (90-138)||(18816954-18817002)
chr5 (90-138)||(22429200-22429247)
chr5 (90-138)||(26571168-26571216)
chr5 (91-131)||(34576870-34576909)
chr5 (90-138)||(37780746-37780794)
chr5 (91-142)||(2817152-2817203)
chr5 (91-138)||(11351431-11351478)
chr5 (31-82)||(17695281-17695332)
chr5 (91-138)||(21207229-21207276)
chr5 (54-85)||(26070716-26070747)
chr5 (260-314)||(16726084-16726137)
chr5 (91-138)||(9665560-9665605)
chr5 (267-315)||(18433020-18433067)
chr5 (90-138)||(19514967-19515015)
chr5 (90-138)||(23011081-23011128)
chr5 (90-142)||(25941014-25941066)
chr5 (267-315)||(34576872-34576918)
chr5 (91-138)||(34576991-34577039)
chr5 (90-138)||(41383171-41383218)
[»] scaffold0319 (3 HSPs)
scaffold0319 (90-357)||(6396-6665)
scaffold0319 (90-178)||(6661-6748)
scaffold0319 (267-315)||(6399-6446)
[»] chr8 (55 HSPs)
chr8 (90-357)||(37752200-37752468)
chr8 (90-357)||(16929026-16929294)
chr8 (90-357)||(43245957-43246228)
chr8 (90-357)||(15155885-15156153)
chr8 (90-357)||(12281210-12281478)
chr8 (90-340)||(33747986-33748237)
chr8 (90-357)||(18019873-18020138)
chr8 (108-339)||(9465676-9465908)
chr8 (90-357)||(34313767-34314032)
chr8 (95-357)||(7127660-7127919)
chr8 (90-357)||(41662109-41662371)
chr8 (90-349)||(43162236-43162497)
chr8 (155-357)||(765820-766022)
chr8 (87-357)||(74685-74953)
chr8 (156-356)||(37670021-37670222)
chr8 (155-248)||(22787008-22787099)
chr8 (87-178)||(765733-765824)
chr8 (156-251)||(3463707-3463802)
chr8 (90-178)||(41662367-41662455)
chr8 (23-89)||(5153996-5154062)
chr8 (90-178)||(12281126-12281214)
chr8 (90-178)||(43245873-43245961)
chr8 (162-249)||(9930731-9930819)
chr8 (90-145)||(16928944-16928999)
chr8 (159-237)||(23123411-23123489)
chr8 (90-178)||(3463909-3463997)
chr8 (156-315)||(11007659-11007814)
chr8 (90-178)||(15156149-15156237)
chr8 (29-89)||(30544000-30544060)
chr8 (90-138)||(37752086-37752134)
chr8 (90-178)||(9823325-9823413)
chr8 (90-178)||(39724012-39724100)
chr8 (90-138)||(13026637-13026685)
chr8 (91-178)||(13027245-13027332)
chr8 (87-138)||(25438791-25438842)
chr8 (276-339)||(43597894-43597957)
chr8 (88-145)||(23123514-23123569)
chr8 (20-82)||(35135229-35135290)
chr8 (90-142)||(3307340-3307392)
chr8 (17-89)||(13583320-13583392)
chr8 (90-138)||(13937393-13937441)
chr8 (90-138)||(22851392-22851440)
chr8 (90-138)||(34498559-34498607)
chr8 (159-207)||(43598687-43598735)
chr8 (91-138)||(22786843-22786890)
chr8 (90-137)||(37397150-37397197)
chr8 (21-87)||(31436709-31436775)
chr8 (90-178)||(13936725-13936812)
chr8 (93-145)||(18019915-18019968)
chr8 (90-131)||(23123340-23123381)
chr8 (90-142)||(6199096-6199148)
chr8 (90-138)||(9822750-9822798)
chr8 (18-85)||(27097607-27097674)
chr8 (90-138)||(37396710-37396758)
chr8 (90-138)||(41662523-41662571)
[»] chr3 (41 HSPs)
chr3 (90-357)||(18874975-18875243)
chr3 (90-357)||(20968720-20968988)
chr3 (90-357)||(10293694-10293961)
chr3 (90-355)||(9026820-9027084)
chr3 (90-324)||(45060598-45060830)
chr3 (155-339)||(3644599-3644794)
chr3 (85-311)||(17372295-17372519)
chr3 (155-251)||(47870887-47870983)
chr3 (155-315)||(13657513-13657671)
chr3 (90-292)||(42627395-42627597)
chr3 (155-251)||(26540760-26540856)
chr3 (160-324)||(1100983-1101148)
chr3 (155-317)||(4947384-4947545)
chr3 (159-315)||(14015765-14015921)
chr3 (90-178)||(20968984-20969071)
chr3 (22-89)||(11475090-11475157)
chr3 (15-89)||(8402353-8402427)
chr3 (159-251)||(17440954-17441046)
chr3 (93-138)||(18874887-18874932)
chr3 (90-131)||(45060882-45060923)
chr3 (90-143)||(47871121-47871173)
chr3 (90-138)||(22429160-22429208)
chr3 (84-178)||(10293604-10293698)
chr3 (90-138)||(1927774-1927822)
chr3 (90-138)||(48159899-48159947)
chr3 (88-131)||(1100915-1100958)
chr3 (92-138)||(4947263-4947309)
chr3 (93-138)||(9026860-9026906)
chr3 (267-317)||(18874885-18874934)
chr3 (93-138)||(18875017-18875063)
chr3 (84-138)||(47666339-47666393)
chr3 (90-131)||(1101192-1101233)
chr3 (90-138)||(3644787-3644835)
chr3 (90-138)||(8314015-8314063)
chr3 (90-138)||(17441067-17441115)
chr3 (267-315)||(18875193-18875240)
chr3 (90-138)||(40848965-40849013)
chr3 (267-315)||(45060873-45060920)
chr3 (90-138)||(48160337-48160385)
chr3 (90-138)||(53687890-53687938)
chr3 (90-138)||(53766583-53766631)
[»] chr6 (35 HSPs)
chr6 (157-357)||(3403757-3403957)
chr6 (90-357)||(18241856-18242124)
chr6 (90-339)||(11656584-11656834)
chr6 (90-357)||(30388064-30388332)
chr6 (90-339)||(10039678-10039917)
chr6 (179-357)||(2762569-2762751)
chr6 (90-313)||(21032107-21032332)
chr6 (90-244)||(33971996-33972148)
chr6 (194-349)||(13579457-13579612)
chr6 (159-315)||(31598043-31598200)
chr6 (159-315)||(31598527-31598684)
chr6 (156-315)||(33658568-33658726)
chr6 (90-178)||(3403953-3404041)
chr6 (155-247)||(23250657-23250750)
chr6 (90-138)||(3403719-3403767)
chr6 (90-178)||(21031981-21032068)
chr6 (267-325)||(33972191-33972249)
chr6 (91-144)||(30388360-30388413)
chr6 (90-178)||(33828992-33829080)
chr6 (90-178)||(33829600-33829688)
chr6 (93-145)||(12714436-12714488)
chr6 (91-142)||(31598728-31598778)
chr6 (91-145)||(3825530-3825583)
chr6 (15-89)||(12972187-12972261)
chr6 (93-145)||(2762611-2762664)
chr6 (93-145)||(10039840-10039893)
chr6 (17-89)||(26499652-26499723)
chr6 (90-145)||(13579648-13579702)
chr6 (91-142)||(32733996-32734047)
chr6 (85-138)||(10087862-10087915)
chr6 (267-315)||(3403722-3403769)
chr6 (267-315)||(3403991-3404038)
chr6 (90-138)||(7654552-7654600)
chr6 (93-144)||(11656608-11656660)
chr6 (90-138)||(33974303-33974351)
[»] chr4 (58 HSPs)
chr4 (90-357)||(16555517-16555785)
chr4 (90-356)||(27304720-27304984)
chr4 (157-357)||(5206028-5206227)
chr4 (90-357)||(11241391-11241658)
chr4 (90-357)||(13198690-13198958)
chr4 (90-357)||(35393562-35393827)
chr4 (90-356)||(8488271-8488533)
chr4 (90-357)||(3930181-3930448)
chr4 (92-323)||(49178636-49178866)
chr4 (90-355)||(22681667-22681931)
chr4 (108-251)||(39415244-39415388)
chr4 (22-87)||(31859710-31859775)
chr4 (155-248)||(3844377-3844470)
chr4 (90-315)||(8181996-8182225)
chr4 (160-249)||(7603186-7603275)
chr4 (90-250)||(54508817-54508980)
chr4 (90-178)||(16555781-16555869)
chr4 (90-178)||(3930444-3930531)
chr4 (90-177)||(18077167-18077254)
chr4 (90-138)||(56505695-56505743)
chr4 (157-211)||(24775742-24775797)
chr4 (19-89)||(33519268-33519338)
chr4 (90-178)||(50678781-50678869)
chr4 (17-89)||(21077471-21077542)
chr4 (91-178)||(36096439-36096526)
chr4 (93-145)||(27304890-27304943)
chr4 (90-178)||(50679388-50679476)
chr4 (90-145)||(8181993-8182049)
chr4 (90-138)||(9380745-9380793)
chr4 (90-138)||(24775787-24775835)
chr4 (90-138)||(25161880-25161928)
chr4 (90-138)||(28196348-28196396)
chr4 (90-138)||(28196777-28196825)
chr4 (90-138)||(32703654-32703702)
chr4 (90-138)||(36095819-36095867)
chr4 (90-142)||(39415524-39415576)
chr4 (90-137)||(9380309-9380356)
chr4 (90-145)||(22681577-22681631)
chr4 (91-138)||(47219205-47219252)
chr4 (90-129)||(49178535-49178574)
chr4 (90-140)||(292784-292834)
chr4 (84-138)||(5206234-5206287)
chr4 (91-145)||(13198606-13198660)
chr4 (93-138)||(16555697-16555743)
chr4 (17-87)||(22119860-22119929)
chr4 (24-89)||(23353856-23353921)
chr4 (90-131)||(32703227-32703268)
chr4 (90-178)||(43051216-43051304)
chr4 (90-138)||(4239370-4239418)
chr4 (90-138)||(5205990-5206038)
chr4 (267-315)||(8182174-8182222)
chr4 (90-138)||(9023246-9023294)
chr4 (90-138)||(9023684-9023732)
chr4 (90-138)||(11529170-11529218)
chr4 (272-328)||(24775633-24775689)
chr4 (90-138)||(26207750-26207798)
chr4 (90-138)||(39744469-39744517)
chr4 (90-142)||(43292357-43292409)
[»] scaffold0802 (2 HSPs)
scaffold0802 (90-357)||(1120-1388)
scaffold0802 (90-178)||(1384-1472)
[»] scaffold0192 (3 HSPs)
scaffold0192 (155-357)||(25134-25337)
scaffold0192 (90-178)||(25333-25421)
scaffold0192 (267-315)||(25371-25418)
[»] scaffold0001 (5 HSPs)
scaffold0001 (90-339)||(439002-439251)
scaffold0001 (91-315)||(183367-183590)
scaffold0001 (90-177)||(438932-439019)
scaffold0001 (90-145)||(183660-183714)
scaffold0001 (267-315)||(438935-438982)
[»] chr1 (41 HSPs)
chr1 (90-355)||(22149405-22149668)
chr1 (91-357)||(8108724-8108990)
chr1 (90-357)||(17518305-17518572)
chr1 (90-357)||(47955392-47955660)
chr1 (90-357)||(41082994-41083262)
chr1 (90-315)||(31848021-31848244)
chr1 (156-250)||(1176905-1176998)
chr1 (155-251)||(46057085-46057182)
chr1 (90-178)||(47955308-47955396)
chr1 (91-138)||(22149703-22149750)
chr1 (90-138)||(8108997-8109045)
chr1 (90-145)||(13589656-13589710)
chr1 (90-145)||(41082911-41082966)
chr1 (87-145)||(17518599-17518656)
chr1 (85-142)||(1176714-1176770)
chr1 (90-178)||(49284411-49284499)
chr1 (90-138)||(48190773-48190821)
chr1 (91-142)||(31847898-31847949)
chr1 (91-144)||(1177016-1177069)
chr1 (91-181)||(1176839-1176930)
chr1 (90-138)||(9347128-9347176)
chr1 (90-142)||(27172541-27172593)
chr1 (90-138)||(32163047-32163095)
chr1 (90-138)||(39692004-39692052)
chr1 (90-138)||(44911027-44911075)
chr1 (90-138)||(48191359-48191407)
chr1 (91-138)||(46823846-46823893)
chr1 (91-138)||(50430085-50430132)
chr1 (17-87)||(19257610-19257680)
chr1 (90-178)||(6002239-6002327)
chr1 (33-82)||(15416776-15416824)
chr1 (266-315)||(22149700-22149748)
chr1 (90-138)||(46056905-46056951)
chr1 (89-138)||(50526476-50526525)
chr1 (90-138)||(13918871-13918919)
chr1 (91-138)||(22149582-22149630)
chr1 (57-89)||(25126718-25126750)
chr1 (54-82)||(31313797-31313825)
chr1 (91-142)||(31848019-31848071)
chr1 (90-138)||(48105120-48105168)
chr1 (90-142)||(49318166-49318217)
[»] chr7 (59 HSPs)
chr7 (90-357)||(9412025-9412293)
chr7 (159-348)||(13772683-13772874)
chr7 (90-357)||(3687355-3687625)
chr7 (156-357)||(6908280-6908482)
chr7 (155-357)||(5349527-5349730)
chr7 (155-348)||(15567056-15567248)
chr7 (90-315)||(23686546-23686769)
chr7 (87-247)||(29291805-29291965)
chr7 (91-315)||(27096170-27096392)
chr7 (91-315)||(27181911-27182133)
chr7 (169-357)||(34235759-34235947)
chr7 (161-357)||(35080023-35080220)
chr7 (157-348)||(33628473-33628674)
chr7 (90-178)||(9412289-9412377)
chr7 (155-301)||(38191401-38191548)
chr7 (90-178)||(3687621-3687708)
chr7 (156-250)||(5735438-5735533)
chr7 (90-145)||(13772898-13772953)
chr7 (160-315)||(18925128-18925279)
chr7 (90-178)||(44599491-44599579)
chr7 (90-178)||(44600099-44600187)
chr7 (90-138)||(5735254-5735302)
chr7 (90-138)||(13772643-13772691)
chr7 (90-215)||(18925064-18925183)
chr7 (90-142)||(29292924-29292976)
chr7 (22-89)||(24596814-24596880)
chr7 (85-138)||(9035297-9035350)
chr7 (90-178)||(13863315-13863403)
chr7 (90-131)||(13863967-13864008)
chr7 (88-145)||(33628395-33628451)
chr7 (90-138)||(10533036-10533084)
chr7 (87-143)||(34235977-34236033)
chr7 (90-138)||(37888835-37888883)
chr7 (90-138)||(37889263-37889311)
chr7 (90-138)||(37972400-37972448)
chr7 (91-138)||(6908488-6908534)
chr7 (90-145)||(8953886-8953940)
chr7 (91-122)||(15567291-15567322)
chr7 (54-89)||(18496803-18496838)
chr7 (91-138)||(20418891-20418938)
chr7 (90-141)||(27096049-27096099)
chr7 (90-141)||(27182204-27182254)
chr7 (90-141)||(42418593-42418644)
chr7 (54-92)||(1074688-1074726)
chr7 (23-89)||(8308847-8308912)
chr7 (184-226)||(8953817-8953859)
chr7 (90-128)||(35079962-35079999)
chr7 (91-141)||(38191265-38191315)
chr7 (91-136)||(5735553-5735598)
chr7 (90-178)||(8643730-8643818)
chr7 (90-131)||(9034869-9034910)
chr7 (90-127)||(23686423-23686459)
chr7 (93-138)||(33628664-33628709)
chr7 (90-138)||(3205097-3205145)
chr7 (90-138)||(6908215-6908262)
chr7 (90-138)||(17156969-17157017)
chr7 (90-138)||(20419328-20419376)
chr7 (90-138)||(22740158-22740206)
chr7 (90-138)||(29293350-29293398)
[»] scaffold0015 (1 HSPs)
scaffold0015 (90-357)||(16939-17207)
[»] scaffold1221 (1 HSPs)
scaffold1221 (91-350)||(1574-1834)
[»] scaffold0110 (3 HSPs)
scaffold0110 (90-249)||(45539-45697)
scaffold0110 (267-357)||(45685-45775)
scaffold0110 (90-178)||(45771-45858)
[»] scaffold0002 (1 HSPs)
scaffold0002 (274-357)||(412007-412090)
[»] scaffold0598 (2 HSPs)
scaffold0598 (88-247)||(6607-6763)
scaffold0598 (282-357)||(6768-6843)
[»] scaffold0009 (1 HSPs)
scaffold0009 (90-248)||(205689-205844)
[»] scaffold0433 (1 HSPs)
scaffold0433 (155-248)||(10690-10783)
[»] scaffold0376 (3 HSPs)
scaffold0376 (157-215)||(7494-7552)
scaffold0376 (90-145)||(7597-7651)
scaffold0376 (90-138)||(7457-7504)
[»] scaffold0535 (1 HSPs)
scaffold0535 (90-141)||(10014-10065)
[»] scaffold0011 (1 HSPs)
scaffold0011 (15-89)||(227989-228063)
[»] scaffold0328 (2 HSPs)
scaffold0328 (90-131)||(6154-6195)
scaffold0328 (90-178)||(6759-6847)
[»] scaffold0460 (1 HSPs)
scaffold0460 (90-142)||(332-384)
[»] scaffold0041 (1 HSPs)
scaffold0041 (90-138)||(38699-38747)
[»] scaffold0035 (1 HSPs)
scaffold0035 (90-138)||(72968-73016)
[»] scaffold0017 (1 HSPs)
scaffold0017 (90-138)||(185278-185326)


Alignment Details
Target: chr2 (Bit Score: 159; Significance: 1e-84; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 11883978 - 11883709
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||         |||||||||||||| |||||||||| || ||||||    
T  11883978 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcactccatcttttgtcaattgtgt 11883879  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc--nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||    
T  11883878 tttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaaagaagagaaggtgcaaaatcgcacaattag 11883779  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  11883778 caaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcataaagggggcaaaaag 11883709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 40469429 - 40469697
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||| | ||||||| ||||||||||||||||||||||| |||||| ||||||         |||||||||||||||| |||||||| || ||||||    
T  40469429 cttaattgtatttttccctcctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgtcaattgtgt 40469528  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||    
T  40469529 tttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaagaagagaaggtgcaaaatcgcacaattagc 40469628  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||| |||| |||| | ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  40469629 aaaacgataagggggaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 40469697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 30191277 - 30191009
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  30191277 cttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 30191178  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||         ||| || |||| |||||||||||||||||    
T  30191177 tttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 30191078  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| ||| || ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  30191077 aaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaag 30191009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 90 - 355
Target Start/End: Original strand, 26737484 - 26737747
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||| ||  ||||||||||||||||||||| |||||| ||||||          | |||||||||||||||||||||| || ||||||    
T  26737484 cttaattgcacttttctcc--tatcttttgctaattgtgcgattttgcaccccctctttttttttaa-cgattttgcaccccatcttttgtcaattgtgt 26737580  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||        |||| || |||| |||||||||||||||||    
T  26737581 tttgttcaaaatcatcattaaaagaga-aaaaatgggctaaacatagggtgcaaaatcgctcaaaaaaaagaagggagggtgcaaaatcgcacaattagc 26737679  T
Q  289 aaaaagatagggggcagaagtgcaa-ttgaatacaaagatggggtgcaaaattagaaagggggaaaaa 355  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||| ||||    
T  26737680 aaaaagatagggggcaaaagtgcaatttgaacacaaagatggggtgcaaaatcagaaagggggcaaaa 26737747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 6171158 - 6171425
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||| |   |          ||| |||||||||||| |||||||||||  |||||    
T  6171158 cttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcaccttttttttttttttgagtgattttgcaccctatcttttgccaactgtgt 6171256  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||         ||| || |||| ||||||||||||||| |    
T  6171257 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattaac 6171356  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  6171357 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 6171425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 90 - 339
Target Start/End: Complemental strand, 17346086 - 17345835
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| ||   ||||||||||||||||||||| |||||| | ||||         ||||||||||||| ||||| |||||||| ||||||    
T  17346086 cttaattgcactttttcctt-tatcttttgctaattgtgcgattttgcacctcctctttatttttgagcgattttgcatcccatattttgccaattgtgt 17345988  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct---cnnnnnnngaagagaaggtgtaaaatcgcacaatta 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||           ||||||  |||| |||||||||||||||    
T  17345987 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagataaggtgcaaaatcgctaaaaaaaaaaagaagagggggtgaaaaatcgcacaatta 17345888  T
Q  287 gcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
     |||||| |||||||||| ||||||||||||| |||||||||| |||||||||    
T  17345887 acaaaaatatagggggcaaaagtgcaattgaacacaaagatggagtgcaaaat 17345835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 32672844 - 32673100
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||   || ||||||||| ||||||||||| |||||| || |||         |||||||||||||||| |||||||||||  |||||    
T  32672844 cttaattgcacttttgttccttatcttttgttaattgtgcgattttgcaccctctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 32672943  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| ||||         ||| || |||| |||||||||||||||||    
T  32672944 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaat-gctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 32673042  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaag 346  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  32673043 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaag 32673100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 90 - 349
Target Start/End: Original strand, 20347165 - 20347424
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||| ||||||||||| |||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  20347165 cttaattacacttttcccctctatcttttgttaattgtgcgattttgca-cccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 20347263  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||| ||||||||| |||||  |||| |||||| |||||||||||||| |         ||| || |||| |||||||||||||||||    
T  20347264 tttgttcaaaatcatcgttaaaagaggggaaatggggcaaaagatggggtgcaaaatcgcgcaaaaaatataagtgagggtgcaaaatcgcacaattagc 20347363  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggg 349  Q
    ||||||||| ||| || ||||||||||||| |||||||||||||||||||| |||||||||    
T  20347364 aaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggg 20347424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 160 - 339
Target Start/End: Original strand, 40221382 - 40221562
Alignment:
Q  160 attttgcacccc-atcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn 258  Q
    |||||||||||| |||||||| || |||||||| ||||||||||||||||||||||| || ||| |||| ||||||  |||||||||||||||           
T  40221382 attttgcacccccatcttttgtcaattgtgtttcgttcaaaatcatcattaaaagagggggaaaggggcaaaagatgaggtgcaaaatcgctcaaaaaaa 40221481  T
Q  259 gaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
    |||||   |||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  40221482 gaagaaggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaattgaacacaaagatggggtgcaaaat 40221562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 90 - 315
Target Start/End: Original strand, 43495311 - 43495533
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||          |||||||||||||| ||| |||||||| ||||||    
T  43495311 cttaattgcacttttcccacctatattttgctaattgtgcgatttttcatcccctctttttttt--agcgattttgcacctcatattttgccaattgtgt 43495408  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    |||||||||||||||||||||||||| ||||   |||| || ||| ||||||||||| ||||        |||||  |||| ||||||||||||||  ||    
T  43495409 tttgttcaaaatcatcattaaaagaggggaaggggggcaaatgatggggtgcaaaattgctcaaaaaaataagagggggtgcaaaatcgcacaattgaca 43495508  T
Q  290 aaaagatagggggcagaagtgcaatt 315  Q
    ||||||||||||| | ||||||||||    
T  43495509 aaaagataggggg-aaaagtgcaatt 43495533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 155 - 315
Target Start/End: Complemental strand, 15321676 - 15321517
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||   ||| | |||| ||||||||||||||||       
T  15321676 gagcgattttgcaccccatcttttatcaattgtgttttgttcaaaatcatcattaaaagaggggaaatgaggcaagagatggggtgcaaaatcgctcaaa 15321577  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
        ||||||| |||| ||||||||||| || | ||||||||||||| || ||||||||||    
T  15321576 aaaagaagagagggtgcaaaatcgcacagtt-ggaaaaagataggggacaaaagtgcaatt 15321517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 345
Target Start/End: Original strand, 15920913 - 15920991
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaa 345  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  15920913 ggtgtaaaatcgcacaattagcaaaaagttagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaa 15920991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 315
Target Start/End: Complemental strand, 18055330 - 18055171
Alignment:
Q  157 gcgattttgcaccccatcttttgccagttgtgttt-tgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnn 255  Q
    |||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||  || | |||||| || |||||||||||||        
T  18055330 gcgattttgcaccccatcttttgccaattgtgtttgtcttcaaaatcatcattaaaagaggggaaataggtcgaaagatgggatgcaaaatcgctcaaaa 18055231  T
Q  256 nnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
        |||||  |||| |||||||||||||| ||||||  |||||| ||| ||||||||||    
T  18055230 aaataagagggggtgcaaaatcgcacaattggcaaaattatagggtgcaaaagtgcaatt 18055171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 15920781 - 15920890
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgtt 190  Q
    |||||| |||||||||| ||||||||||| ||||||||||| |||||| ||||||         |||| ||||||||||||||||||||||| |||||||    
T  15920781 ttaatttcacttttccctcctatcttttgttaattgtgcgattttgcaccccctctttttttt-gagcaattttgcaccccatcttttgccaattgtgtt 15920879  T
Q  191 ttgttcaaaat 201  Q
    |||||||||||    
T  15920880 ttgttcaaaat 15920890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 24832333 - 24832421
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||         ||||||||||||||||||||||||    
T  24832333 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttt 24832421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 30190925 - 30191013
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  30190925 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 30191013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 40469780 - 40469693
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  40469780 ttaattgcactttttccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 40469693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 11883625 - 11883680
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  11883625 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctc 11883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 20347516 - 20347428
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||| ||||||||||||||||||||    
T  20347516 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagggattttgcaccccatctttt 20347428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 18819011 - 18818944
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaa 85  Q
    ||||||||||||||||||||| ||| ||||| | |||||||||||||||| |||| |||||||||||||    
T  18819011 tgtgcgaattttgcagttttcatccctttttga-gcattcttccgtcttgcaatgtcttggaacttgaa 18818944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 211
Target Start/End: Complemental strand, 6495773 - 6495653
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||||| ||||||||||||  |||||||||| |||||| | |||          ||||||||||||||  |||||||||||| ||| ||    
T  6495773 cttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacctcct--ttttttttgagcgattttgcacgtcatcttttgccaattgcgt 6495676  T
Q  190 ttt-gttcaaaatcatcattaaa 211  Q
    ||| |||||||||||||||||||    
T  6495675 ttttgttcaaaatcatcattaaa 6495653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 2639534 - 2639446
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  2639534 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 2639446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 6171508 - 6171421
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||| ||||||         |||| |||||||||||||||||||    
T  6171508 cttaattgcacttttcccccctatcttttgccaattgtgggattttgca-cccctctttttttttgagcaattttgcaccccatctttt 6171421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 26841589 - 26841677
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  26841589 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 26841677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 15321392 - 15321480
Alignment:
Q  88 gacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||  ||||||||| ||||||||| | ||||||||||||          ||||||||||||||||||||||||    
T  15321392 gacttaattgcacttttcccc--tatcttttgttaattgtgcaattttgcatcccctattttattttgagcgattttgcaccccatctttt 15321480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 18296745 - 18296697
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  18296745 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgca 18296697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 26737833 - 26737785
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||    
T  26737833 cttaattgcacttttcacccctatcttttgctaactgtgcgattttgca 26737785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 39730751 - 39730691
Alignment:
Q  23 aattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttg 83  Q
    ||||||||| | |||||||||||||   || ||||||||||||||||||||||||||||||    
T  39730751 aattttgcaatgttcgtccttttttttagcgttcttccgtcttgaaatgccttggaacttg 39730691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 43495656 - 43495570
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||    
T  43495656 cttaattgcacttt-cccacctatattttgctaattgtgcgattttgcatcccctc-ttttttttgagcgattttgcaccccatctttt 43495570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 18236112 - 18236179
Alignment:
Q  22 gaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||| |||||| |||| ||||||   |||||||||||||| ||||||||| |||||||||||||    
T  18236112 gaattttgtagttttagtccctttttcgatcattcttccgtctttaaatgcctttgaacttgaaatga 18236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 41790964 - 41790917
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgc 137  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||    
T  41790964 cttaattgcacttttcccccctatattttgccaattgtgcgattttgc 41790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 2638822 - 2638910
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||| ||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  2638822 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 2638910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 18296078 - 18296166
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||| ||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  18296078 cttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 18296166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 26842290 - 26842202
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||| |||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  26842290 cttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 26842202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 5378663 - 5378711
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  5378663 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 5378711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 7591204 - 7591291
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||| ||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 7591291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 17850980 - 17851028
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  17850980 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 17851028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 32673193 - 32673107
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||| |||| |||||||||| |||||||||| |||||| |||||          ||||||||||||||||||||||||    
T  32673193 ttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcaccccctatttttttttgagcgattttgcaccccatctttt 32673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 37720206 - 37720254
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  37720206 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 37720254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 6324924 - 6324971
Alignment:
Q  95 ttgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||||||||  ||||| |||||||||| ||||||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatccc 6324971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 8851151 - 8851198
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 8851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 18055050 - 18055103
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||| ||||||    
T  18055050 cttaattgcacttttccccc-ta-cttttgctaattgtgcgattttgcaccccctc 18055103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 6325401 - 6325351
Alignment:
Q  88 gacttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||| |||  ||||| |||||||||| ||||||    
T  6325401 gacttaattgcacttttcccccatatagtttgccaattgtgcgattttgca 6325351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 17414966 - 17415040
Alignment:
Q  15 cctgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||||||| || |||||| |||| |||||   || ||||||||||||| |||| ||| |||||||||||||    
T  17414966 cctgtgcgaattatgtagtttttgtcccttttttgagcgttcttccgtcttgcaatgtcttagaacttgaaatga 17415040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 26737706 - 26737660
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgca 138  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgca 26737660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 40469655 - 40469609
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgca 40469609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 24047690 - 24047627
Alignment:
Q  18 gtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttg 83  Q
    ||||||||||||||||||| |||||||||  | || || |||| ||||||||||||||||||||||    
T  24047690 gtgcgaattttgcagtttt-gtcctttttcga-gcgtttttccatcttgaaatgccttggaacttg 24047627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 5380011 - 5379963
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||| | |||||||||| ||||||    
T  5380011 cttaattgcacttttcccccctatagtttaccaattgtgcgattttgca 5379963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 6495469 - 6495516
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| ||||||    
T  6495469 cttaattgcacttttcctccctatc-tttgttaattgtgcgattttgca 6495516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 8851634 - 8851586
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  8851634 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 8851586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 11883675 - 11883628
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  11883675 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 11883628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 11883928 - 11883975
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  11883928 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 11883975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 19541342 - 19541274
Alignment:
Q  21 cgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||||| |||||| |||| ||||||  ||||| ||| |||||| |||||||  |||||||||||||    
T  19541342 cgaattttgtagtttttgtccctttttcgagcatttttctgtcttgcaatgcctatgaacttgaaatga 19541274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 24434929 - 24434857
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||| ||||  ||| || |||| ||||||| || ||||||| |||||||||||||||||| |||| ||||    
T  24434929 tgtgcgattttttgagtcttagtccctttttcaagcgttcttccctcttgaaatgccttggaatttgatatga 24434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 24832383 - 24832336
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  24832383 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 24832336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 27417067 - 27417139
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||||| |  |||||||||||  ||||||  | ||||||||||| ||||  ||||||||||||||||||    
T  27417067 tgtgcgaattcttgagttttcgtcccgttttcaatcgttcttccgtctggaaactccttggaacttgaaatga 27417139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 40221315 - 40221362
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||| ||||||| |||||||||||||||||| ||| ||||||    
T  40221315 cttaattgcacctttcccc-ctatcttttgctaattgttcgattttgca 40221362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 40469731 - 40469778
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  40469731 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaatt 40469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 8e-83; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 18433368 - 18433101
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         ||||||||||||||||||||||||| || ||||||    
T  18433368 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttt-gagcgattttgcaccccatcttttgtcaattgtgt 18433270  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||        |||||||||||| |||||||||||||||||    
T  18433269 tttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgtaaaatcgctcaaaaaaaagaagagaaggtgcaaaatcgcacaattagc 18433170  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  18433169 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 18433101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 25175203 - 25174935
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  25175203 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 25175104  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||         ||| || |||| |||||||||||||||||    
T  25175103 tttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 25175004  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||| |||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  25175003 aaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 25174935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 25116113 - 25115843
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccc--tcnnnnnnnnngagcgattttgcaccccatcttttgccagttgt 187  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||  ||         |||||||||||||||| |||||||||||  |||    
T  25116113 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccccttctttttttttgagcgattttgcaccctatcttttgccaactgt 25116014  T
Q  188 gttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaatta 286  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||         ||| || |||| |||||||||||||||    
T  25116013 gttttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaatta 25115914  T
Q  287 gcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||| |||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  25115913 gcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 25115843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 34577215 - 34576951
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||| |||||||||||||||||| || |||||| ||| ||         ||||||||||||||||||||||||| || ||||||    
T  34577215 cttaattgcactttttcccc-tatcttttgctaattgtgtgattttgcaccccatctttttttt-gagcgattttgcaccccatcttttgtcaattgtgt 34577118  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||| ||| ||||||||||||||||||    
T  34577117 tttgttcaaaatcatcattaaaagagaggaaaa-gggctaaagatagggtgcaaaatcgctaaaaaaatgaagagaatgtgcaaaatcgcacaattagca 34577019  T
Q  290 aaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||| |||||| |||||||||| || |||||||||||||| ||||| |||||||||| ||||||    
T  34577018 aaaagataaggggcaaaagtgcaattaaacacaaagatggggtggaaaatcagaaagggggcaaaaag 34576951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 155 - 357
Target Start/End: Complemental strand, 26020738 - 26020536
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    ||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||       
T  26020738 gagcgattttgcaactcatcttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcaaa 26020639  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaa 354  Q
        |||||||| ||| ||||||||||||||| |||||||||| ||| || ||||||||||||| |||||||||||||||||||| |||||||||| |||    
T  26020638 aaaagaagagaatgtgcaaaatcgcacaattaacaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 26020539  T
Q  355 aag 357  Q
    |||    
T  26020538 aag 26020536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 159 - 357
Target Start/End: Original strand, 5779632 - 5779830
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn 258  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||           
T  5779632 gattttgcacctcatcttttgacaattgtgttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgcaaaatcgctcaaaagaa 5779731  T
Q  259 gaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||  || || |||||||||||||||||||||||||||| | || ||||||||||||| ||||| ||| | |||||||| |||||| || |||||||    
T  5779732 gaagaagagatgcaaaatcgcacaattagcaaaaagataggagacaaaagtgcaattgaacacaaaaatgagatgcaaaatcagaaagaggaaaaaaag 5779830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 155 - 357
Target Start/End: Complemental strand, 9665815 - 9665612
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct-cnn 253  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||  |||||||||| |||||| |||| |||||| |||||||||||||||        
T  9665815 gagcgattttgcaccccatcttttgcaaattgtgttttgttcaaaatcaatattaaaagaggggaaaaagggcaaaagatggggtgcaaaatcgctaata 9665716  T
Q  254 nnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaa 353  Q
         ||||||  | || | ||||||||||||||||||||||||||||||| ||   |||||||| ||||||||| |||||||||| |||||||| | ||    
T  9665715 aaaaagaagaggggatgcagaatcgcacaattagcaaaaagatagggggcaaaaacacaattgaacacaaagatgaggtgcaaaatcagaaagggagcaa 9665616  T
Q  354 aaag 357  Q
    ||||    
T  9665615 aaag 9665612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 22428936 - 22429092
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||         |||| ||||||||||||||||||||||| ||||||    
T  22428936 cttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccatcttttttt--gagcaattttgcaccccatcttttgccaattgtgt 22429032  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct 250  Q
    |||||||||||||||||||||||||||||  || |||||| ||||||||||||||||||||    
T  22429033 tttgttcaaaatcatcattaaaagagagg-gaaggggctacagatagggtgcaaaatcgct 22429092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 90 - 349
Target Start/End: Complemental strand, 5187882 - 5187616
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgca---ccccatcttttgccagttg 186  Q
    ||||||||||||||| |||| ||||||||| ||||||||| | |||||| |||||          |||||||||||||   |||||||||| |||| |||    
T  5187882 cttaattgcacttttgccccttatcttttgttaattgtgcaattttgcaccccctatttttttttgagcgattttgcatcaccccatcttt-gccaattg 5187784  T
Q  187 tgttttgttcaaaatcatcat---taaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn--gaagagaaggtgtaaaatcgcac 281  Q
    ||||||| |||||||||||||   |||||||  ||||||||| | |||| ||||||||||||||||||         ||||||  |||  |||||||||     
T  5187783 tgttttggtcaaaatcatcatcattaaaagatgggaaaatggacaaaagttagggtgcaaaatcgctcaaaaaaaaagaagagggggtacaaaatcgcat 5187684  T
Q  282 aattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggg 349  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||| |||||||||| |||||||||    
T  5187683 aattagcaaaaagataggggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggg 5187616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 324
Target Start/End: Original strand, 12441084 - 12441249
Alignment:
Q  160 attttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnn 258  Q
    |||||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||  ||| |||||| |||||||||||| |||            
T  12441084 attttgcacctcatcttttgtcaattgtgttttgttcaaaatcatcattaaaagaggggaaaaccggcaaaagatggggtgcaaaatcactcaaaaaaaa 12441183  T
Q  259 gaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaa 324  Q
    ||||||   ||  ||||||||||||||  ||||||||||||||||| |||||||||| || |||||    
T  12441184 gaagagggagtacaaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaacacaaa 12441249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 315
Target Start/End: Original strand, 9869563 - 9869788
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt--gccagttgtg 188  Q
    |||||||||||||||| ||||||  |||||||||||||||| ||||||  ||| |         ||||||||||||||||| | ||||  |||| |||||    
T  9869563 ttaattgcacttttcctccctat--tttgctaattgtgcgattttgca--cccactttttttttgagcgattttgcaccccttttttttggccaattgtg 9869658  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct---cnnnnnnngaagagaaggtgtaaaatcgcacaatt 285  Q
    ||||||||||||||||| ||||||||| |||||  |||| || ||| |||||||||||||||           ||||||  |||| ||||||||||||||    
T  9869659 ttttgttcaaaatcatcgttaaaagaggggaaagggggcaaatgatggggtgcaaaatcgctaaaaaaaaaaagaagagggggtgcaaaatcgcacaatt 9869758  T
Q  286 agcaaaaagatagggggcagaagtgcaatt 315  Q
     | ||||||| |||||||| ||||||||||    
T  9869759 ggtaaaaagacagggggcaaaagtgcaatt 9869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 18433017 - 18433105
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||         ||||||||||||||||||||||||    
T  18433017 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttt 18433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 16466794 - 16466744
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatc 140  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  16466794 cttaattgcacttttcccccctatattttgctaattgtgcgattttgcatc 16466744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 25115759 - 25115847
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||| |||||          ||||||||||||||||||||||||    
T  25115759 cttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttt 25115847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 25174851 - 25174939
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||| |||||          ||||||||||||||||||||||||    
T  25174851 cttaattgcacttttcccccctatcttttgccaattgtgtgattttgcaccccctttttttttttgagcgattttgcaccccatctttt 25174939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 26020452 - 26020540
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||| ||| ||         ||||||||||||||| ||||||||    
T  26020452 cttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccgcatctttt 26020540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 357
Target Start/End: Original strand, 22429142 - 22429193
Alignment:
Q  306 aagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  22429142 aagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 22429193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 20694954 - 20694880
Alignment:
Q  15 cctgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||||||||||||||||||||||| ||||||  || |||||||||| || |||| ||| ||||||| |||||    
T  20694954 cctgtgcgaattttgcagttttcgtccctttttcgagcgttcttccgtcgtgcaatggcttagaacttgcaatga 20694880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 41382896 - 41383013
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgtt 190  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||  |||||          |||||||||||| | ||||||||||||  ||| ||    
T  41382896 ttaattgca-ttttcccccctatcttttgttaattgtgcgattttgca--ccctctcttttttttagcgattttgcatctcatcttttgccaaatgtttt 41382992  T
Q  191 ttgttcaaaatcatcattaaa 211  Q
    ||||||||||| |||||||||    
T  41382993 ttgttcaaaataatcattaaa 41383013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 18817663 - 18817575
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  18817663 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 18817575  T

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Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 23011150 - 23011240
Alignment:
Q  159 gattttgcaccccatctttt-gccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgc 249  Q
    ||||||||||||||| |||| | ||  ||||||||| ||||||||||||||||||||| |||||   ||| |||||| ||||||||||||||    
T  23011150 gattttgcaccccatttttttgtcaaatgtgttttgctcaaaatcatcattaaaagaggggaaagatggcaaaagat-gggtgcaaaatcgc 23011240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 20083770 - 20083708
Alignment:
Q  23 aattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaa 85  Q
    ||||||||||||||||||| ||||||  | |||||||||||||| | |||||| |||||||||    
T  20083770 aattttgcagttttcgtccctttttcgagtattcttccgtcttgcagtgccttagaacttgaa 20083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 12441362 - 12441314
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcc 141  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  12441362 cttaattgcacttttcccc--tatcttttgctaattgtgcga-tttgcatcc 12441314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 12498569 - 12498617
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  12498569 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 12498617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 12498980 - 12498932
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  12498980 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 12498932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 16726084 - 16726128
Alignment:
Q  94 attgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgca 16726128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 18816954 - 18817002
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  18816954 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgca 18817002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 22429247 - 22429200
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  22429247 cttaattgcatttttccccc-tatcttttgctaattgtgcgattttgca 22429200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 26571216 - 26571168
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  26571216 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 26571168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 34576870 - 34576909
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  34576870 ttaattgcacttt-cccccctatcttttgctaattgtgcga 34576909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 37780794 - 37780746
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||| |||||||||||||||  |||||||||||||||| ||||||    
T  37780794 cttaattgtacttttcccccctatagtttgctaattgtgcgattttgca 37780746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 2817152 - 2817203
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||||| ||||||  ||||| |||||||||| ||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatccc 2817203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 11351478 - 11351431
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||| | |||||||||||| |||||||||| ||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgca 11351431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 17695281 - 17695332
Alignment:
Q  31 agttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaactt 82  Q
    ||||||||||| ||||||  || |||||| ||||||||||||||||||||||    
T  17695281 agttttcgtccctttttcgagcgttcttcggtcttgaaatgccttggaactt 17695332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 21207229 - 21207276
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 21207276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 85
Target Start/End: Complemental strand, 26070747 - 26070716
Alignment:
Q  54 ttcttccgtcttgaaatgccttggaacttgaa 85  Q
    ||||||||||||||||||||||||||||||||    
T  26070747 ttcttccgtcttgaaatgccttggaacttgaa 26070716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 314
Target Start/End: Complemental strand, 16726137 - 16726084
Alignment:
Q  260 aagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaat 314  Q
    ||||| ||||| |||||||||||||| |||||| ||||||||||| |||||||||    
T  16726137 aagaggaggtgcaaaatcgcacaattggcaaaa-gatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 9665560 - 9665605
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||  ||||||||||||||||||| | ||||||    
T  9665560 ttaattgcacttttcccc--tatcttttgctaattgtgcaattttgca 9665605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 18433067 - 18433020
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  18433067 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 18433020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 19515015 - 19514967
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  19515015 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 19514967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 23011081 - 23011128
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| ||||||||  ||||||||||||||||||||| ||||||    
T  23011081 cttaattgcatttttcccct-tatcttttgctaattgtgcgattttgca 23011128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 25941066 - 25941014
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||||||| |||||  |||| ||||| ||||| ||||||||||    
T  25941066 cttaattgcacttttccctcctatagtttgttaattatgcgattttgcatccc 25941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 34576918 - 34576872
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||||    
T  34576918 ggtgtaaaatcgcacaattagc-aaaagatagggggga-aagtgcaatt 34576872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 34576991 - 34577039
Alignment:
Q  91 ttaattgcacttttcccccctatc-ttttgctaattgtgcgactttgca 138  Q
    |||||||||||||| |||| |||| ||||||||||||||||| ||||||    
T  34576991 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgca 34577039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 41383218 - 41383171
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||| ||||||||||| ||| ||||||||||||||||| ||||||    
T  41383218 cttaattgaacttttccccc-tattttttgctaattgtgcgattttgca 41383171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 6396 - 6665
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnng-agcgattttgcaccccatcttttgccagttgtg 188  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||           |||||||||||||||||||||||| || |||||    
T  6396 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttttagcgattttgcaccccatcttttgtcaattgtg 6495  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||        |||||||||||| ||||||||||||||||    
T  6496 ttttgttcaaaatcatcattaaaagagaggaaaagggactaaagatagggtgcaaaatcgctcaagaaaaagaagagaaggtgcaaaatcgcacaattag 6595  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  6596 caaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 6665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 6748 - 6661
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  6748 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 6661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 6446 - 6399
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  6446 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 37752468 - 37752200
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         ||||||||||||||||||| ||||| || ||||||    
T  37752468 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttt-gagcgattttgcaccccatattttgtcaattgtgt 37752370  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc--nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||    
T  37752369 tttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaaaagaagagaaggtgcaaaatcgcacaattag 37752270  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  37752269 caaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 37752200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 16929294 - 16929026
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||         || |||||||||||||||||||||| || ||||||    
T  16929294 cttaattgcacttttctcccctatcttttgctaattgtgcgattttgcaccccctctttttttt-gaacgattttgcaccccatcttttgtcaattgtgt 16929196  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc---nnnnnnngaagagaaggtgtaaaatcgcacaatta 286  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          |||||||||||| |||||| ||||||||    
T  16929195 tttgttcaaaatcatcattaaaagagaggaaaatggactaaagatagggtgcaaaatcgctcaaaaaaaaaagaagagaaggtgcaaaatctcacaatta 16929096  T
Q  287 gcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
     |||||||||| |||||| |||||||||| || |||||||||||||||||||| |||||||||| ||||||    
T  16929095 acaaaaagataaggggcaaaagtgcaatt-aacacaaagatggggtgcaaaatcagaaagggggcaaaaag 16929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 43246228 - 43245957
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttgtg 188  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||          ||||||||||||||||||||||||| || |||||    
T  43246228 cttaattgcacttttcccccctatcttttgctaattgtgtgattttgcaccccctcttttttttttgagcgattttgcaccccatcttttgtcaattgtg 43246129  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn---gaagagaaggtgtaaaatcgcacaatt 285  Q
    |||||||||||||||||||||||| | ||||||| ||| |||| ||||||||||||||| |||          |||||||||||| ||||||||||||||    
T  43246128 ttttgttcaaaatcatcattaaaaaaaaggaaaagggggtaaaaatagggtgcaaaatccctcaaaaaaaaaagaagagaaggtgcaaaatcgcacaatt 43246029  T
Q  286 agcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||||| |||||| ||||| ||||||| |||||||||||||||||||| |||||||||| ||||||    
T  43246028 agcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 43245957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 15155885 - 15156153
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  15155885 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 15155984  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnng-aagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||| |||||||| |||||| |||| |||||| | ||||||||||||||         ||| || |||| |||||||||||||||||    
T  15155985 tttgttcaaaatcatcactaaaagaggggaaaaggggcaaaagatggagtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 15156084  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  15156085 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 15156153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 12281478 - 12281210
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||         |||||||||| ||||| |||||||| ||  |||||    
T  12281478 cttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatcttttgtcaactgtgt 12281379  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||         ||| || |||| ||||||||||| |||||    
T  12281378 tttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacagttagc 12281279  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||  ||||||||| ||||||    
T  12281278 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaag 12281210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 90 - 340
Target Start/End: Original strand, 33747986 - 33748237
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||  ||  |||||||||||||||||| || ||||||||| |||         |||||||||||||||| ||||||||||| ||||||    
T  33747986 cttaattgcacttttttcca-tatcttttgctaattgtgtgattttgcatccgctctttttttttgagcgattttgcaccctatcttttgccaattgtgt 33748084  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagc- 288  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||||||||       ||||||  |||| |||||||||||||||||     
T  33748085 tttgttcaaaatcatcactaaaagagaggaaaatggactaaatatagggtgcagaatcgctcaaaaaaagaagagggggtgcaaaatcgcacaattagca 33748184  T
Q  289 -aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaatt 340  Q
     ||||| |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  33748185 aaaaaaaatagggggcaaaagtgcaattgaacacaaagatgaggtgcaaaatt 33748237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 18020138 - 18019873
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||  ||||||||| ||||||||||| |||||| ||||||         ||||||||||||||||||||||||| ||  || ||    
T  18020138 cttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcaccccctctttttttt-gagcgattttgcaccccatcttttggcaactgcgt 18020042  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn-gaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||| |||||||||||  |||||| |||| |||||| ||||||||||||||||        ||||||  |||| ||||||||||||||||     
T  18020041 tttgttcaaaatcgtcattaaaagaagggaaaaggggcaaaagatggggtgcaaaatcgctcaaaaagaagaagagggggtgcaaaatcgcacaattagg 18019942  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  18019941 aaaaagatagggggcaaaagtgcaattgaacacaaagatgcggtgcaaaatcagaaagggggcaaaaag 18019873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 108 - 339
Target Start/End: Complemental strand, 9465908 - 9465676
Alignment:
Q  108 ccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcat 207  Q
    |||||||||||| ||||||||||| |||||| ||||||         |||| |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcaattttgcaccccattttttgccaattgtgttttgttcaaaatcatcat 9465809  T
Q  208 taaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcaga 306  Q
    |||||||| |||||| |||| ||||||  |||||||||||||||        |||| |  |||| ||||||||||| ||||||||||||||||||||| |    
T  9465808 taaaagaggggaaaaggggcaaaagatgaggtgcaaaatcgctcaaaaaaaagaagtgggggtgcaaaatcgcacagttagcaaaaagatagggggcaaa 9465709  T
Q  307 agtgcaattgaatacaaagatggggtgcaaaat 339  Q
    |||||||||||| |||||||| |||||||||||    
T  9465708 agtgcaattgaacacaaagatagggtgcaaaat 9465676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 34313767 - 34314032
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| ||||||||| |  |||||    
T  34313767 cttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcaccccctctttttttt-gagcgattttgcaccctatcttttgcaaactgtgt 34313863  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||||||||         ||| || |||| ||||||| |||||||||    
T  34313864 tttgttcaaaattatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgtacaattagc 34313963  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| ||| || ||||||||||||| ||||||||| |||||||||| ||||| |||| ||||||    
T  34313964 aaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaaggggcaaaaag 34314032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 95 - 357
Target Start/End: Original strand, 7127660 - 7127919
Alignment:
Q  95 ttgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgttttgt 194  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||           |||||||||||||| ||||||||| || |||||||||||    
T  7127660 ttgcacttttccccc-tatcttttgctaattgtgcgattttgcatccccttttttctt---agcgattttgcacctcatcttttgtcaattgtgttttgt 7127755  T
Q  195 tcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagcaaaaa 293  Q
    | ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||        |||||   |||| |||||| | |||||||||||||    
T  7127756 taaaaatcatcattaaaagaggggaaaatgggcaaaagatggggtgcaaaatcgctcataaaaaagaagatggggtgcaaaatcacgcaattagcaaaaa 7127855  T
Q  294 gatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| | ||||||||||||| ||||| ||||| |||||||| ||||| |||| ||||||    
T  7127856 gatagggggtaaaagtgcaattgaacacaaaaatgggatgcaaaatcagaaaaggggtaaaaag 7127919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 41662109 - 41662371
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||| |||||| ||||||          ||||||||||||||  |||||||||||  |||||    
T  41662109 cttaattgcacattttccccatatcttttgttaattgtgcgattttgcaccccctctttttttttaagcgattttgcaccatatcttttgccaactgtgt 41662208  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnng-aagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||      |||||||||||| |||||| |||| |||||||||||||||||||||||         ||| |||||||||||||||||||||||||    
T  41662209 tttgttca------tcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgaaggtgtaaaatcgcacaattagc 41662302  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| ||||||||  |||||||||| |||||||||| ||||||    
T  41662303 aaaaagataaggggcaaaagtgcaattgaacacaaagataaggtgcaaaatcagaaagggggcaaaaag 41662371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 90 - 349
Target Start/End: Original strand, 43162236 - 43162497
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn--gagcgattttgcaccccatcttttgccagttgt 187  Q
    |||||||||||||||||||| ||| ||||| ||||||||||| |||||| | ||||           |||||||||||||||| |||||||| || ||||    
T  43162236 cttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctcctctttttttttttgagcgattttgcaccctatcttttgtcaattgt 43162334  T
Q  188 gttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaatta 286  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||||         ||| || | || |||||||||||||||    
T  43162335 gttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatgaggtgcaaaatcgctcaaaaaatataagtgaggatgcaaaatcgcacaatta 43162434  T
Q  287 gcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggg 349  Q
    ||||||||||| ||| || ||||||||||||| |||||||||||||||||||| |||||||||    
T  43162435 gcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggg 43162497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 155 - 357
Target Start/End: Complemental strand, 766022 - 765820
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nn 253  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||| ||       
T  766022 gagcgattttgcaccctatcttttgccaactgtgttttgttcaaaatcatcattaaaagaggggaaaatggg-aaaagatagggtgcaaaatcgttcaaa 765924  T
Q  254 nnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaa 353  Q
          ||| || |||| ||||||||||  |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||  ||||||||| ||    
T  765923 aaatataagtgagggtgcaaaatcgcacggttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaa 765824  T
Q  354 aaag 357  Q
    ||||    
T  765823 aaag 765820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 87 - 357
Target Start/End: Original strand, 74685 - 74953
Alignment:
Q  87 tgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttg 186  Q
    ||||||||||||||||||||| || |||||||||||||||||||| |||||| ||| |           |||||||||||||| |||||||||| | |||    
T  74685 tgacttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcaccccttttttttttt--agcgattttgcacctcatcttttgctaattg 74781  T
Q  187 tgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn-gaagagaaggtgtaaaatcgcacaatt 285  Q
    ||||||||||||||||||||||||||||| |||||   ||| ||| || |||||||||||  |||        |||||||| ||| ||||||||||||||    
T  74782 tgttttgttcaaaatcatcattaaaagaggggaaatgaggcaaaaaatggggtgcaaaattactcaaaaaaaagaagagaaagtgcaaaatcgcacaatt 74881  T
Q  286 agcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
      |||||||||||||| || |||||||||| || ||||||||| |||||||||| |||||||||| ||||||    
T  74882 gacaaaaagataggggacaaaagtgcaattaaacacaaagatgtggtgcaaaatcagaaagggggcaaaaag 74953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 356
Target Start/End: Original strand, 37670021 - 37670222
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct-cnnn 254  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||  |||| |||||| |||| ||||||||||         
T  37670021 agcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcattattaaaagagagaaaatggggcaaaagattgggtacaaaatcgctaaaaa 37670120  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaa 354  Q
        || |||  |||| |||||| ||||||||||||||| ||| ||  || || ||||||| || ||||||||||||||| |||| |||||||||| |||    
T  37670121 aaaggaggagggggtgcaaaatcacacaattagcaaaaaaatatggtacaaaaatgcaattaaacacaaagatggggtgctaaatcagaaagggggcaaa 37670220  T
Q  355 aa 356  Q
    ||    
T  37670221 aa 37670222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 22787099 - 22787008
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcg 248  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| || ||| |||| |||||| |||||||||||||    
T  22787099 gagcgattttgcacctcatctttttccaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaagat-gggtgcaaaatcg 22787008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 765733 - 765824
Alignment:
Q  87 tgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  765733 tgacttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 765824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 3463707 - 3463802
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc 251  Q
    ||||||||| |||| |||||||||||| ||| |||||||| |||||||||||||||||||||| ||  |||| |||||| ||||||||||| ||||    
T  3463707 agcgattttacacctcatcttttgccaattgagttttgtttaaaatcatcattaaaagagaggtaagggggcaaaagatggggtgcaaaattgctc 3463802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 41662455 - 41662367
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  41662455 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttt 41662367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 5154062 - 5153996
Alignment:
Q  23 aattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||||||||||||||| ||||||  |||||||||||||||| |||| |||||||||||||||||    
T  5154062 aattttgcagttttcgtccctttttcgagcattcttccgtcttgcaatgtcttggaacttgaaatga 5153996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 12281126 - 12281214
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| | ||||         ||||||||||||||||||||||||    
T  12281126 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctcctctttttttttgagcgattttgcaccccatctttt 12281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 43245873 - 43245961
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  43245873 cttaattgcactttttccccctatcttttgataattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttt 43245961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 9930819 - 9930731
Alignment:
Q  162 tttgcaccccatcttttgccagttgtgtttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgc 249  Q
    |||||||||||| ||||| || ||||||||| ||||||||||||||||||||||| |||||  |||| ||||||  |||||||||||||    
T  9930819 tttgcaccccatattttgtcaattgtgtttttgttcaaaatcatcattaaaagaggggaaagggggcaaaagatgaggtgcaaaatcgc 9930731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 16928944 - 16928999
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  16928944 cttaattgcactttccccccctatcttttgctaattgtgcgattttgcaccccctc 16928999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 23123411 - 23123489
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgtttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagg 237  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||| |||| ||||    
T  23123411 gattttgcaccc-atcttttgccaattgtgtttttgttcaaaatcatcattaaaagaggggaaaaggggcaaaaggtagg 23123489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 3463997 - 3463909
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| || |||         ||||||||||||||||||||||||    
T  3463997 cttaattgcacttttcccccctatattttgctaattgtgcgatcttgcaccctctcctttgttttgagcgattttgcaccccatctttt 3463909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 315
Target Start/End: Complemental strand, 11007814 - 11007659
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgtttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    ||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||| ||||   || | |||||||   |||||||||  ||       
T  11007814 agcgattttgcaccc-attttttgccaattgtgtttttgttcaaaatcatcattaaaagaggggaagg-ggacaaaagata---tgcaaaatcattccaa 11007720  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
         || | ||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  11007719 aaaaaaaaaaaaggtgtaaaatcgcacaattggcaaaaagatagggagcaaaagtgcaatt 11007659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 15156237 - 15156149
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||| ||||||          |||||||||||||||||||||||    
T  15156237 cttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttt 15156149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 30544060 - 30544000
Alignment:
Q  29 gcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||||| || |||||||| |||||||||| |||| ||||||||||||||||||||||    
T  30544060 gcagttttcgaccctttttcactcattcttccgccttgcaatgccttggaacttgaaatga 30544000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 37752086 - 37752134
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  37752086 cttaattgcacttttcccccctatgttttgctaattgtgcgattttgca 37752134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 9823413 - 9823325
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  9823413 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 9823325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 39724100 - 39724012
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  39724100 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 39724012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 13026637 - 13026685
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  13026637 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgca 13026685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 13027332 - 13027245
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 13027245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 25438791 - 25438842
Alignment:
Q  87 tgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  25438791 tgacttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 25438842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 339
Target Start/End: Complemental strand, 43597957 - 43597894
Alignment:
Q  276 tcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
    ||||||||||||||||||||||||||||| |||  |||||||| |||||| || | ||||||||    
T  43597957 tcgcacaattagcaaaaagatagggggcaaaagcacaattgaacacaaagttgagatgcaaaat 43597894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 23123569 - 23123514
Alignment:
Q  88 gacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||||  |||| ||||||||||||||||||||| |||||| ||||||    
T  23123569 gacttaattgcacttt--ccccttatcttttgctaattgtgcgattttgcaccccctc 23123514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 35135229 - 35135290
Alignment:
Q  20 gcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaactt 82  Q
    |||||||||||| ||||| |||||||| || || ||||||| |||||||||||||||||||||    
T  35135229 gcgaattttgcacttttcatccttttt-caagcgttcttccatcttgaaatgccttggaactt 35135290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 3307340 - 3307392
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||| ||||| |||||||||||||  |||||||||| ||||||||||    
T  3307340 cttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatccc 3307392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 13583320 - 13583392
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||||| || ||||||||  ||||||||  || ||||||||||||| ||| ||||||||||| ||||||    
T  13583320 tgtgcgaattatgtagttttcgatcttttttccagcgttcttccgtcttgcaataccttggaacttcaaatga 13583392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 13937441 - 13937393
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||| |||||  |||||||||| ||||||    
T  13937441 cttaattgcacttttcccccctattttttgtcaattgtgcgaatttgca 13937393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 22851392 - 22851440
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| |||||||||||||  |||||||||| ||||||    
T  22851392 cttaattgcacttttcacccctatcttttgtcaattgtgcgattttgca 22851440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 34498607 - 34498559
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  34498607 cttaattgcacttttcccccctatagtttgcaaattgtgcgattttgca 34498559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 43598735 - 43598687
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcat 207  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||||||    
T  43598735 gattttgcaccacattttttgtcaattgtgttttgttcaaaatcatcat 43598687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 22786843 - 22786890
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||| ||||||||||||| ||||||||| || ||||||    
T  22786843 ttaattgcactttttccccctatcttttactaattgtgtgattttgca 22786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 37397197 - 37397150
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgc 137  Q
    ||||||||||||||||||||||||  ||||| |||||||||| |||||    
T  37397197 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 37397150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 31436775 - 31436709
Alignment:
Q  21 cgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaat 87  Q
    |||||| || |||||||||||||||||   |  |||||| |||||| ||||||||||||||||||||    
T  31436775 cgaattatgtagttttcgtcctttttttgtgttttcttctgtcttgcaatgccttggaacttgaaat 31436709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 13936725 - 13936812
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||| ||||||||| | |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  13936725 cttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttt 13936812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 18019915 - 18019968
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||| ||||||||| |||| |||||||||||| |||||| ||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcaccccctc 18019968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 23123340 - 23123381
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    |||||||||||||||||| |||||||||||  ||||||||||    
T  23123340 cttaattgcacttttccctcctatcttttgtcaattgtgcga 23123381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 6199148 - 6199096
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    ||||||||||||||||  ||||||  ||||| |||||||||| ||||||||||    
T  6199148 cttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatccc 6199096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 9822750 - 9822798
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| ||||||||||||   |||||||||| ||||||    
T  9822750 cttaattgcacttttcacccctatcttttatcaattgtgcgattttgca 9822798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 27097607 - 27097674
Alignment:
Q  18 gtgcgaattttgcagttttcgtc-cttttttcacgcattcttccgtcttgaaatgccttggaacttgaa 85  Q
    ||||||||||||| |||||| || ||||||| | |  ||||||||||||| ||||||||||||||||||    
T  27097607 gtgcgaattttgcggttttcatctcttttttga-gtgttcttccgtcttgcaatgccttggaacttgaa 27097674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 37396710 - 37396758
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  |||||  ||||||||| ||||||    
T  37396710 cttaattgcacttttcccccctatagtttgccgattgtgcgattttgca 37396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 41662523 - 41662571
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||| |||  ||||| |||||||||| ||||||    
T  41662523 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgca 41662571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 5e-81; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 18875243 - 18874975
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||||||||||||||||||||| ||| |||||| ||||||         ||||||||||||||||||||||||| || ||||||    
T  18875243 cttaattgcacttttgccccctatcttttgctaattgtacgattttgcaccccctctttttttttgagcgattttgcaccccatcttttggcaattgtgt 18875144  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaaga-gaaggtgtaaaatcgcacaattagc 288  Q
    ||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||       ||||| | ||||| |||||||||||||||||    
T  18875143 tttattcaaaatcatcattaaaatagaagaaaatgggctaaagatagggtgcaaaatcgctcaaaaaaagaagagggaggtgcaaaatcgcacaattagc 18875044  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  18875043 aaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 18874975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 20968720 - 20968988
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  20968720 cttaattgcacctttcccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 20968819  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||         ||| || |||| |||||||||||||||||    
T  20968820 tttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 20968919  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||| |||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  20968920 aaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 20968988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 10293961 - 10293694
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  10293961 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatcttttgccaactgtgt 10293862  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||         ||| || |||| ||||||||||||||| |    
T  10293861 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattaac 10293762  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||| ||||||||||| |||||||||| ||||||    
T  10293761 aaaaagataaggggcaaaagtgcaattgaacacaaagat-gggtgcaaaatcagaaagggggcaaaaag 10293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 90 - 355
Target Start/End: Complemental strand, 9027084 - 9026820
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||| |||||||||||| ||||||||||||||||||| | ||| || |||||          ||| |||||||||||||||||||||||| ||||||    
T  9027084 cttaatttcacttttccccc-tatcttttgctaattgtgcaattttaca-ccccttgttttttttgagtgattttgcaccccatcttttgccaattgtgt 9026987  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| ||        |||||||  ||| |||||||||||||||||    
T  9026986 tttgttaaaaatcatcattaaaagagaggaaaaggggctaaagataaggtgcaaaatcgttcaaaaaaaagaagagagagtgcaaaatcgcacaattagc 9026887  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaa 355  Q
    |||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||||||    
T  9026886 aaaaagatagggggcaaaagtgcaattgaacacaaagacggggggcaaaatcagaaagggggaaaaa 9026820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 90 - 324
Target Start/End: Original strand, 45060598 - 45060830
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||| | | | |          |||||||||||||||| || ||||| || ||||||    
T  45060598 cttaattgcacttttccccactatcttttgctaattatgcgattttgta-ctcttttttttttttgagcgattttgcaccctattttttgtcaattgtgt 45060696  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    ||||||||||||||||||||||| || ||||| ||||| |||||| |||||||||||||| |       |||||| ||||| ||||||| |||||| |||    
T  45060697 tttgttcaaaatcatcattaaaataggggaaagtgggcaaaagatggggtgcaaaatcgcccaaaaaaagaagaggaggtgcaaaatcgaacaattggca 45060796  T
Q  290 aaaagatagggggcagaagtgcaattgaatacaaa 324  Q
    |||||||| |||||| ||||||||||||| |||||    
T  45060797 aaaagata-ggggcaaaagtgcaattgaacacaaa 45060830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 155 - 339
Target Start/End: Original strand, 3644599 - 3644794
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||       
T  3644599 gagcgattttgcacctcatcttttgccaattgtgttttgttcgaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaca 3644698  T
Q  255 nnnngaagagaa-----------ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
         || | ||           |||| ||||||||||||||||||| | ||||| ||||| |||||||||| || ||||||||||||||||||||    
T  3644699 aaaaaaaaataaaaaaaaatcggggtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaaacacaaagatggggtgcaaaat 3644794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 85 - 311
Target Start/End: Original strand, 17372295 - 17372519
Alignment:
Q  85 aatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagt 184  Q
    |||| ||||||||||| ||| |||||||| ||||||||||||||||| |||||| |||||          |||||||||||||||||||||||||||| |    
T  17372295 aatggcttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccct-gttttttttgagcgattttgcaccccatcttttgccaat 17372393  T
Q  185 tgtgttttgttcaaaatcatcattaaaagagaggaa-aatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaa 283  Q
    ||| ||||||||||||||||||||||||||| ||||  | |||| |||||| ||||||||||| ||||        |||||  |||| ||||||||||||    
T  17372394 tgtattttgttcaaaatcatcattaaaagaggggaaggaggggcaaaagatggggtgcaaaattgctcaaaaaa--aagagggggtgcaaaatcgcacaa 17372491  T
Q  284 ttagcaaaaagatagggggcagaagtgc 311  Q
    || |||||||||||||| ||| ||||||    
T  17372492 ttggcaaaaagatagggtgcaaaagtgc 17372519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 47870887 - 47870983
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc 251  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||| |||||| ||||||||||||||||    
T  47870887 gagcgattttgcaccccatcttttgccaattgtgttttgttcgaaatcatcattaaaagtggggaaaatgggcaaaagatggggtgcaaaatcgctc 47870983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 13657513 - 13657671
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||  |||||| |||||||||||  |||       
T  13657513 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggtaaaagatggggtgcaaaatttctcaaa 13657611  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
        ||||||  |||| |||||||||||||| ||||||||||||||| || ||||||||||    
T  13657612 aaaagaagag-gggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaatt 13657671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 90 - 292
Target Start/End: Complemental strand, 42627597 - 42627395
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||| | |||||||||||||||||| || |||||||||| ||         ||||||||||||||||||| |||||||| |||| |    
T  42627597 cttaattgcacttttccctc-tatcttttgctaattgtgtgattttgcatccc-tctttttttatgagcgattttgcaccccattttttgccaattgttt 42627500  T
Q  190 ttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    ||| ||||||||||||||||||||||| |||||| || | ||| ||||| |||||||||||||        |||||| ||||| ||||||||||||||||    
T  42627499 ttttgttcaaaatcatcattaaaagaggggaaaagggacaaaatataggatgcaaaatcgctcaaaaaaaagaagaggaggtgcaaaatcgcacaattag 42627400  T
Q  288 caaaa 292  Q
    |||||    
T  42627399 caaaa 42627395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 26540856 - 26540760
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc 251  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||   ||| ||||||  |||||||||| ||||    
T  26540856 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagaggggaaatgaggcaaaagatgaggtgcaaaattgctc 26540760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 324
Target Start/End: Original strand, 1100983 - 1101148
Alignment:
Q  160 attttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc--nnnnnn 257  Q
    |||||||||||||||||||| || |||| ||||||||||||| ||||||||||||| ||||||||||  ||| || |||||||||||| |||            
T  1100983 attttgcaccccatcttttgtcaattgtattttgttcaaaattatcattaaaagaggggaaaatggggcaaaaatggggtgcaaaatcactcaaaaaaga 1101082  T
Q  258 ngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaa 324  Q
     ||||||  |||| ||||||||||||||  |||||||||| |||||| |||||||||| || |||||    
T  1101083 agaagagggggtgcaaaatcgcacaattgacaaaaagata-ggggcaaaagtgcaattaaacacaaa 1101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 317
Target Start/End: Complemental strand, 4947545 - 4947384
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    ||||||||||||||   ||||||||||| ||||||||||||||||||| ||||  ||| || |||||  |||| ||| ||||||||||||||||| |       
T  4947545 gagcgattttgcacat-atcttttgccaattgtgttttgttcaaaatcgtcatagaaataggggaaagagggcaaaaaatagggtgcaaaatcgcccaaa 4947447  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattga 317  Q
        ||||||   ||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  4947446 aaaagaagagggagtgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattga 4947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 315
Target Start/End: Original strand, 14015765 - 14015921
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgtttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnn 257  Q
    |||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||| |||||  |||| |||||  ||||||||||||||||          
T  14015765 gattttgcaccc-atcttttgcaaattgtgtttttgttcaaaatcatcattaaaagaggggaaagagggcaaaaga-ggggtgcaaaatcgctcaaaaaa 14015862  T
Q  258 ngaagagaaggtgtaaaatcgcacaattagcaaaaagata-gggggcagaagtgcaatt 315  Q
     ||||||   ||| |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  14015863 agaagagggagtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaatt 14015921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 20969071 - 20968984
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| |||||          ||||||||||||||||||||||||    
T  20969071 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca-cccctttttttttttgagcgattttgcaccccatctttt 20968984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 11475157 - 11475090
Alignment:
Q  22 gaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||||||||||||||| |||||   || ||||||||||||| || |||||||||||||||||||    
T  11475157 gaattttgcagttttcgtccctttttttagcgttcttccgtcttgcaacgccttggaacttgaaatga 11475090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 8402353 - 8402427
Alignment:
Q  15 cctgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||| ||||||||||||||||||||  ||||| | ||||||||| ||||| |||| | |||||||||||||||    
T  8402353 cctgtgtgaattttgcagttttcgtcccattttctcacattcttccatcttgcaatgtcatggaacttgaaatga 8402427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 17441046 - 17440954
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatg-ggctaaagatagggtgcaaaatcgctc 251  Q
    ||||||||||||||| | ||| || ||||||| |||||||||||||||||||||||| |||||| | ||| |||||| ||| |||||| |||||    
T  17441046 gattttgcaccccatatgttgtcaattgtgttatgttcaaaatcatcattaaaagag-ggaaaaggcggcaaaagatggggagcaaaagcgctc 17440954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 18874887 - 18874932
Alignment:
Q  93 aattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||    
T  18874887 aattgcactttttccccctatcttttgctaattgtgcgattttgca 18874932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 45060923 - 45060882
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  45060923 cttaattgcacttttcacccctatcttttgctaattgtgcga 45060882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 47871173 - 47871121
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccc 143  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  47871173 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccc 47871121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 22429160 - 22429208
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  22429160 cttaattgcacttttctcccctatattttgccaattgtgcgactttgca 22429208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 10293604 - 10293698
Alignment:
Q  84 aaatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||| |||||||||| ||||  |||||||||||||  |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  10293604 aaatggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 10293698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 1927774 - 1927822
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  1927774 cttaattgcacctttcccccctatcttttgccaattatgcgattttgca 1927822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 48159899 - 48159947
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  48159899 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 48159947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 1100915 - 1100958
Alignment:
Q  88 gacttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||    
T  1100915 gacttaattgcacttatccaccctatcttttgcaaattgtgcga 1100958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 4947263 - 4947309
Alignment:
Q  92 taattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgca 4947309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 9026860 - 9026906
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgca 138  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  9026860 aattgcacttttgccccctatctttttgctaattgtgcgattttgca 9026906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 18874934 - 18874885
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattga 317  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||||    
T  18874934 ggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattga 18874885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 18875017 - 18875063
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgca 138  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgca 18875063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 47666393 - 47666339
Alignment:
Q  84 aaatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||||| | ||||||    
T  47666393 aaatggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgca 47666339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 1101233 - 1101192
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    |||||||||||||||||||| |||||||||||  ||||||||    
T  1101233 cttaattgcacttttcccccttatcttttgctttttgtgcga 1101192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 3644835 - 3644787
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| ||||||||| ||| ||||| ||||||||||| ||||||    
T  3644835 cttaattgcatttttcccccttattttttgttaattgtgcgattttgca 3644787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 8314015 - 8314063
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| ||||||| |||||  |||||||||| ||||||    
T  8314015 cttaattgcacttttctcccctatattttgtcaattgtgcgattttgca 8314063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 17441115 - 17441067
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| |||||| | |||||||||| ||||||||||| ||||||    
T  17441115 cttaattgcatttttcctctctatcttttgttaattgtgcgattttgca 17441067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 18875193 - 18875240
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||| ||||||||||||| ||||||||||| ||||||||||    
T  18875193 ggtgcaaaatcgtacaattagcaaaa-gatagggggcaaaagtgcaatt 18875240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 40849013 - 40848965
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||| ||||  ||||| |||||||||| ||||||    
T  40849013 cttaattgcacttttcccctctatagtttgccaattgtgcgattttgca 40848965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 45060873 - 45060920
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||||||||||||||||||||| ||||||||||||  | ||||||||||    
T  45060873 ggtgtaaaatcgcacaattagc-aaaagataggggtgaaaagtgcaatt 45060920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 48160385 - 48160337
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||| |||||||||  ||||| |||||||||| ||||||    
T  48160385 cttaattgcactttccccccctatagtttgccaattgtgcgattttgca 48160337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 53687890 - 53687938
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  53687890 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 53687938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 53766631 - 53766583
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||| | ||||||    
T  53766631 cttaattgcacttttcccccctatagtttgcaaattgtgcaattttgca 53766583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 3403757 - 3403957
Alignment:
Q  157 gcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnn 256  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||         
T  3403757 gcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaa 3403856  T
Q  257 nngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaa 356  Q
      |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  3403857 aagaagagaaggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaa 3403956  T
Q  357 g 357  Q
    |    
T  3403957 g 3403957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 18241856 - 18242124
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  18241856 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatcttttgccaactgtgt 18241955  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||         ||| || |||| ||||||||||||||| |    
T  18241956 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattaac 18242055  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  18242056 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 18242124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 90 - 339
Target Start/End: Complemental strand, 11656834 - 11656584
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||         |||||||||||||||||||||||||||| ||||||    
T  11656834 cttaattgcacttttctctcctatcttttgctaattgtgcgattttgcaccccctctttatttttgagcgattttgcaccccatcttttgccaattgtgt 11656735  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||| |||        ||| ||  |||| ||||||||||||||| |    
T  11656734 tttgttcaaaatcatcaataaaagagaggtaaaggggctaaagatagggtgcaaaatcactcaaaaaaaagaatagggggtgcaaaatcgcacaattatc 11656635  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  11656634 aaaacgatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaat 11656584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 30388064 - 30388332
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||| || |||         ||||||||||||||||||||||||| || || |||    
T  30388064 cttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcagcctctctttttttt-gagcgattttgcaccccatcttttgtcaattatgt 30388161  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn---gaagagaaggtgtaaaatcgcacaatta 286  Q
    ||||||||||||||||| |||||||||| |||| || |||||||||| ||||||||||||||          |||||||||||| |||||||||||||||    
T  30388162 tttgttcaaaatcatcaataaaagagagaaaaagggactaaagatagagtgcaaaatcgctcaaaaaaaaaagaagagaaggtgcaaaatcgcacaatta 30388261  T
Q  287 gcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||||| |||||| ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  30388262 gcaaaaagataaggggcaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggtaaaaag 30388332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 90 - 339
Target Start/End: Original strand, 10039678 - 10039917
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||         |||||||||| |||||||||||||| |||||||||    
T  10039678 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgca-cccctctttttttatgagcgattttacaccccatcttttgtcagttgtgt 10039775  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn-gaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||||||||||||         ||| |||||||| ||||||||||||||        || |||  |||| |||||||||||||||||    
T  10039776 tttgttcaaaatcatcattaaaagag---------ggcaaaagatagagtgcaaaatcgctcaaaaaaaagatgagggggtgcaaaatcgcacaattagc 10039866  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10039867 aaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaat 10039917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 179 - 357
Target Start/End: Complemental strand, 2762751 - 2762569
Alignment:
Q  179 gccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn----gaagagaaggtgtaaa 274  Q
    |||| ||||||||| ||||||||||||||||||| || |||||||| || |||||||||||||||||||||||           ||||||  |||| |||    
T  2762751 gccaattgtgttttattcaaaatcatcattaaaaaaggggaaaatgagcaaaagatagggtgcaaaatcgctcaaaaaaaaaaagaagagggggtgcaaa 2762652  T
Q  275 atcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  2762651 atcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaag 2762569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 90 - 313
Target Start/End: Complemental strand, 21032332 - 21032107
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttgtg 188  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||  | ||||          |||||||||||||||||||||||| ||| |||||    
T  21032332 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcgcctcctcttttttctttgagcgattttgcaccccatcttttaccaattgtg 21032233  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    ||||||||||||||||||||||||||| |||||  |||  |||||| ||||| ||||||||||        ||||||  |||| ||||||||||||||      
T  21032232 ttttgttcaaaatcatcattaaaagaggggaaagggggtaaaagatggggtgaaaaatcgctcaaaaaaaagaagagggggtgcaaaatcgcacaattga 21032133  T
Q  288 caaaaagatagggggcagaagtgcaa 313  Q
    ||| ||||||||||||| ||||||||    
T  21032132 caagaagatagggggcaaaagtgcaa 21032107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 33971996 - 33972148
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||| |||| |||| ||||||||| ||||||| ||| |||||| ||||||         |||||||||||||||| ||||||||||| ||||||    
T  33971996 cttaattgcagtttttcccc-tatcttttgttaattgtacgattttgcaccccctcttattttt-gagcgattttgcaccctatcttttgccaattgtgt 33972093  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaa 244  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  33972094 tttgttcaaaatcatcattaaaagagaggaaaaggggataaagatagggtgcaaa 33972148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 349
Target Start/End: Original strand, 13579457 - 13579612
Alignment:
Q  194 ttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagcaaaaa 293  Q
    ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| |       ||   |  |||| | ||| ||||||||||||||||    
T  13579457 ttcaaaatcatcattaaaagagaggaaaagggtctaaagacagggtgcaaaatcgcacaaaaaaagagatgggggtgcagaattgcacaattagcaaaaa 13579556  T
Q  294 gatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggg 349  Q
     |||||||||| ||||||||||||| ||||| |||||||||||||| |||||||||    
T  13579557 tatagggggcaaaagtgcaattgaacacaaatatggggtgcaaaataagaaagggg 13579612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 159 - 315
Target Start/End: Original strand, 31598043 - 31598200
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn 258  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| || | |||||| |||||||||||||| |           
T  31598043 gattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagagggggaaagggacaaaagatggggtgcaaaatcgcgcaaaaaaa 31598142  T
Q  259 gaagaga-aggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
     |  |||  ||| |||||||||||||||  ||||||||||||||||| ||||||||||    
T  31598143 cataagaggggtataaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatt 31598200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 159 - 315
Target Start/End: Original strand, 31598527 - 31598684
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnn 258  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| || ||| || | |||||| |||||||||||||| |           
T  31598527 gattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaagagggggaaagggacaaaagatggggtgcaaaatcgcgcaaaaaaa 31598626  T
Q  259 gaagaga-aggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
     |  |||  ||| |||||||||||||||  ||||||||||||||||| ||||||||||    
T  31598627 cataagaggggtataaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatt 31598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 315
Target Start/End: Complemental strand, 33658726 - 33658568
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnn 255  Q
    |||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||| || ||| |||| ||| |||||||||||||||| ||        
T  33658726 agcgattttgcaccccgtcttttgtcaattgtgttttgttcaaaatcatcattaaaagag-gggaaaggggcaaaaaatagggtgcaaaatcgttc-aaa 33658629  T
Q  256 nnngaagagaa-ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
       ||||| || |||| ||||| |||||||| |||||||||||  ||||| ||||||||||    
T  33658628 aaagaagaaaagggtgcaaaattgcacaattggcaaaaagataaagggcaaaagtgcaatt 33658568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 3404041 - 3403953
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  3404041 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 3403953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 23250657 - 23250750
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgtttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatc 247  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||| |||||  |||| |||  | ||||||||||||    
T  23250657 gagcgattttgcgccctatcttttgccaattgtgtttttgttcaaaatcatcattaaaagaggggaaagggggcaaaaagtggggtgcaaaatc 23250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 3403719 - 3403767
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3403719 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgca 3403767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 21031981 - 21032068
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  21031981 cttaattgcacttttccccc-taacttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 21032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 33972191 - 33972249
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaag 325  Q
    |||| |||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  33972191 ggtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaag 33972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 30388413 - 30388360
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccct 144  Q
    ||||||| |||||| |||||||||||||||||||||||||| |||||| |||||    
T  30388413 ttaattgtactttttccccctatcttttgctaattgtgcgattttgcaccccct 30388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 33828992 - 33829080
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  33828992 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 33829080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 33829688 - 33829600
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  33829688 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 33829600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 12714436 - 12714488
Alignment:
Q  93 aattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||| ||||||    
T  12714436 aattgcacttttgccccctatcttttgttaattgtgcgattttgcagcccctc 12714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 31598778 - 31598728
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  31598778 ttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcatccc 31598728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 3825530 - 3825583
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||| ||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcaccccctc 3825583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 12972187 - 12972261
Alignment:
Q  15 cctgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||| |||||||||||||||||||   ||||||  |||||||||||||||| ||||||||| || || ||||||    
T  12972187 cctgtacgaattttgcagttttcgttactttttcgagcattcttccgtcttgcaatgccttgaaagtttaaatga 12972261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 2762611 - 2762664
Alignment:
Q  93 aattgcacttttcccccctatctttt-gctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 2762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 10039893 - 10039840
Alignment:
Q  93 aattgcacttttcccccctatctttt-gctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccccctc 10039840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 26499652 - 26499723
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||| ||||||||||||||||| ||||||  | || || |||||||||| ||||||||| ||||||||||||    
T  26499652 tgtgcaaattttgcagttttcgttctttttcga-gcgttgttccgtcttgcaatgccttgaaacttgaaatga 26499723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 13579702 - 13579648
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||| ||| |||| |||||||||||||||| |||||| ||||||    
T  13579702 cttaattgcacttttctccc-tatcgtttgctaattgtgcgattttgcaccccctc 13579648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 32734047 - 32733996
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||||| ||||||  ||||| |||||||||| ||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatccc 32733996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 10087915 - 10087862
Alignment:
Q  85 aatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||| |||||||||||||||||||||| |  ||||| |||||||||| ||||||    
T  10087915 aatggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgca 10087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 3403769 - 3403722
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  3403769 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 3403722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 3403991 - 3404038
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  3403991 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 3404038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 7654600 - 7654552
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  7654600 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 7654552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 11656608 - 11656660
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgcatcccct 144  Q
    |||||||||||| ||||||||| ||||| ||||||||||| |||||| |||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcaccccct 11656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 33974351 - 33974303
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| |||||||||||||  ||||| |||||||||| ||||||    
T  33974351 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgca 33974303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 5e-72; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 16555517 - 16555785
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttgtg 188  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||          |||||||||||||||| |||||||| || |||||    
T  16555517 cttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccc-atcttttgtcaattgtg 16555615  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||        |||||||||||| ||||||||||||||||    
T  16555616 ttttgttcaaaatcatcattaaaagagaggaaaaagggctaaagatagggtgcaaaatcgctcaaaaaaaagaagagaaggtgcaaaatcgcacaattag 16555715  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||| ||||| |||||||||| ||||||    
T  16555716 caaaaagataagggggaaaagtgcaattgaacacaaagatggggtgtaaaatcagaaagggggcaaaaag 16555785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 90 - 356
Target Start/End: Original strand, 27304720 - 27304984
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||| |||||||||  |||||| |||||||||||||| |||||| ||||||         ||||||||||||| ||||| |||||||| ||||||    
T  27304720 cttaattgcccttttcccc--tatcttctgctaattgtgcgattttgcaccccctcttttcttttgagcgattttgcaacccatattttgccaattgtgt 27304817  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||  |||| ||||||||||||||||||    
T  27304818 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgcttaaaaaaggaagagggggtgcaaaatcgcacaattagca 27304917  T
Q  290 aaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaa 356  Q
    ||||||||||||| | |||||||||||||  |||| |||||||||||||| ||||| |||| |||||    
T  27304918 aaaagatagggggaaaaagtgcaattgaactcaaatatggggtgcaaaatcagaaaaggggcaaaaa 27304984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 157 - 357
Target Start/End: Original strand, 5206028 - 5206227
Alignment:
Q  157 gcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnn 256  Q
    |||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  5206028 gcgattttgcaccccatcttttgccaattttattttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcagaaa 5206127  T
Q  257 nngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaa 356  Q
       |||||   ||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| |||||    
T  5206128 aa-aagagggagtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaa 5206226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 11241391 - 11241658
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||||| || ||||||||| ||||||||||| |||||||||||||         |||||||||||||||| |||||||||||  |||||    
T  11241391 cttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatcccctctttttttt-gagcgattttgcaccctatcttttgccaactgtgt 11241489  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||         ||| || |||| |||||||||||||||||    
T  11241490 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatagggtgcaaaatcgctcaaaaattataagtgagggtgcaaaatcgcacaattagc 11241589  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||| ||||||| |||||||||||||||||||| |||||||||| ||||||    
T  11241590 aaaaagataaggggcaaaagtgaaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 11241658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 13198958 - 13198690
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||   ||||    
T  13198958 cttaattgcacttttcccccctatcttttgttaattgtgcgattttgcaccccctcttttgttttgagcgattttgcaccctatcttttgccaaccgtgt 13198859  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||         ||| || |||| ||||||||||||||||     
T  13198858 tttgttcaaagtcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattaga 13198759  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| ||| || ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  13198758 aaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaag 13198690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 35393827 - 35393562
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||| || ||||||    
T  35393827 cttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcaccccctcttttttat-gagcgattttgcaccccatcttttgtcaattgtgt 35393730  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||        |||||| | ||| |||||||||||||||||    
T  35393729 tttgctcaaaatcatcattaaaagaggggaaaatgggcaaaagataggctgcaaaatcgctcataaaaaagaagagga-gtgcaaaatcgcacaattagc 35393631  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||||||||| |||| |||||||| |||||||| ||||||||||| | |||||||| ||||||    
T  35393630 aaaaagatagggggcaaaagttcaattgaacacaaagatagggtgcaaaatcaaaaagggggtaaaaag 35393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 90 - 356
Target Start/End: Complemental strand, 8488533 - 8488271
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||| ||  |||||||| |||||||||||| |||||| ||||||         ||||||||||||||||||||||||| || |||| |    
T  8488533 cttaattgcacttttcgcct-tatctttttctaattgtgcgattttgcaccccctctttttttt-gagcgattttgcaccccatcttttgtcaattgtat 8488436  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||| ||       ||||||  |||| ||||| ||||||||||||    
T  8488435 tttgttcaaaatcatcattaaaagagaggaaaaggggttaaaaataaggtgcaaaatcgttcaaaaaaagaagag--ggtgcaaaattgcacaattagca 8488338  T
Q  290 aaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaa 356  Q
    |||| |||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||| ||||||    
T  8488337 aaaacatagggggcaaaagtgcaattgaacacaaagacggggtgcaaaatcagaaaggggaaaaaaa 8488271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 3930181 - 3930448
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||| ||||||||  ||||| ||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  3930181 cttaattgcactttttcccc-tatcttttattaattatgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 3930279  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||         ||| || |||| |||||||||||||||||    
T  3930280 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 3930379  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| ||| || ||||||||||| | |||||||||||||||||||| |||||||||| ||||||    
T  3930380 aaaaagataagggacaaaagtgcaattggacacaaagatggggtgcaaaatcagaaagggggcaaaaag 3930448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 92 - 323
Target Start/End: Complemental strand, 49178866 - 49178636
Alignment:
Q  92 taattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnng-agcgattttgcaccccatcttttgccagttgtgtt 190  Q
    |||||||||||||| |||||||||||||| |||||||||| |||||| ||||||         | ||||||||||||||||||||||||||| |||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcaccccctctttttttttggagcgattttgcaccccatcttttgccaattgtgtt 49178767  T
Q  191 ttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagcaa 290  Q
    ||||||||||||||||||||||||| || ||| |||| |||||| ||||||||||| ||||       ||||||  |||| |||||||||||||| ||||    
T  49178766 ttgttcaaaatcatcattaaaagag-gggaaaggggcaaaagattgggtgcaaaattgctcaaaaaaagaagag-gggtgcaaaatcgcacaattggcaa 49178669  T
Q  291 aaagatagggggcagaagtgcaattgaatacaa 323  Q
    |||||||||||||| ||||||||||||| ||||    
T  49178668 aaagatagggggcaaaagtgcaattgaacacaa 49178636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 90 - 355
Target Start/End: Complemental strand, 22681931 - 22681667
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||| ||||||||||| ||||||||| | ||||||  || |          |||| ||||||||||  |||||||| ||  | |||    
T  22681931 cttaattgcacttttccctcctatcttttgttaattgtgcaattttgca--ccatttatttttttgagcaattttgcaccatatcttttgtcaactatgt 22681834  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnng-aagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||| ||||| ||||||||||         ||| ||| ||| |||||||||||||||||    
T  22681833 tttgttcaaaatcatcattaaaagaggggaaaaggggcaaaagatggggtgtaaaatcgctcaaaaaatataagtgaatgtgcaaaatcgcacaattagc 22681734  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaa 355  Q
    ||||||||| ||| || ||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  22681733 aaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaattagaaaggggcaaaaa 22681667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 39415244 - 39415388
Alignment:
Q  108 ccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcat 207  Q
    |||||||||||||||||||||||| |||||| || |||         ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  39415244 ccctatcttttgctaattgtgcgattttgcaccctctctttttatttgagcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcat 39415343  T
Q  208 taaaagagaggaaaa-tgggctaaagatagggtgcaaaatcgctc 251  Q
    |||||||| ||||||  |||| |||||||| ||||||||||||||    
T  39415344 taaaagaggggaaaagggggcaaaagatagagtgcaaaatcgctc 39415388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 31859710 - 31859775
Alignment:
Q  22 gaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaat 87  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31859710 gaattttgcagttttcgtccttttttcacgcgttcttccgtcttgaaatgccttggaacttgaaat 31859775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 3844470 - 3844377
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcg 248  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||   ||  |||||| |||||||||||||    
T  3844470 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagatgggaaagatggaaaaagatggggtgcaaaatcg 3844377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 315
Target Start/End: Complemental strand, 8182225 - 8181996
Alignment:
Q  90 cttaattgcacttttcccccctatctttt-gctaattgtgcgactttgcatcccc-tcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttg 186  Q
    |||||||||||||||| ||||||| |||| ||||||||||||| |||||| |||| ||          ||||||||||||| |||||||||| ||| |||    
T  8182225 cttaattgcacttttcacccctatttttttgctaattgtgcgattttgcacccccctctttttttgttgagcgattttgcatcccatcttttaccaattg 8182126  T
Q  187 tgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaatt 285  Q
    ||||||||||||||||||||||||||||| ||||   ||   ||| || |||||||||||| |||         |||||  |||| ||||||||||||||    
T  8182125 tgttttgttcaaaatcatcattaaaagaggggaagggggttaaaacatggggtgcaaaatcactcaaaaaaaaaaagagggggtgcaaaatcgcacaatt 8182026  T
Q  286 agcaaaaagatagggggcagaagtgcaatt 315  Q
     |||||| ||||||||||| ||||||||||    
T  8182025 ggcaaaacgatagggggcaaaagtgcaatt 8181996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 7603186 - 7603275
Alignment:
Q  160 attttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgc 249  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||||||||| || |||||  || | |||||| ||||||||||||||    
T  7603186 attttgcaccccctcttttgtcaattgtgttttgttcaaaatcatcattaaaataggggaaatgggacaaaagatggggtgcaaaatcgc 7603275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 90 - 250
Target Start/End: Original strand, 54508817 - 54508980
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| || || ||||||||| ||||||| || |||||| || |||         |||||||||||||||| ||||||||| | ||||||    
T  54508817 cttaattgcactttttcctccaatcttttgccaattgtgtgattttgcaccctctctttttttt-gagcgattttgcaccctatcttttgcaaattgtgt 54508915  T
Q  190 ttt-gttcaaaatca---tcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct 250  Q
    ||| |||||||||||   ||||||||| || |||||| |||| ||||||| ||||||||||||||    
T  54508916 ttttgttcaaaatcatcatcattaaaataggggaaaaggggcaaaagataaggtgcaaaatcgct 54508980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 16555869 - 16555781
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||         ||||||||||||||||||||||||    
T  16555869 cttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttt 16555781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 3930531 - 3930444
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||          |||||||||||||||||||||||    
T  3930531 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctcttttttttttagcgattttgcaccccatctttt 3930444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 18077254 - 18077167
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttt 177  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||         ||||||||||||| |||||||||    
T  18077254 cttaattgcacttttcacccctattttttgctaattgtgcgattttgcaccccctcttttttgttgagcgattttgcatcccatcttt 18077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 56505695 - 56505743
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  56505695 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 56505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 24775797 - 24775742
Alignment:
Q  157 gcgattttgcaccccatcttttgccagttgtg-ttttgttcaaaatcatcattaaa 211  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||    
T  24775797 gcgattttgcaccccatcttttgtcaattgtgtttttgttcaaaatcatcattaaa 24775742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 33519338 - 33519268
Alignment:
Q  19 tgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||| |||||| ||||||||| ||||||| || |||||| |||| |||||||||||||| |||||||||    
T  33519338 tgcgaaatttgcaattttcgtccatttttcaagcgttcttctgtctggaaatgccttggaatttgaaatga 33519268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 50678781 - 50678869
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  50678781 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 50678869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 21077542 - 21077471
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||||||||||||||||||| | ||||| | | |||||||| ||||  ||||||||||||||||||||||    
T  21077542 tgtgcgaattttgcagttttcgtacctttttga-gtattcttccatctttcaatgccttggaacttgaaatga 21077471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 36096526 - 36096439
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 36096439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 27304943 - 27304890
Alignment:
Q  93 aattgcacttttcccccctatctttt-gctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcaccccctc 27304890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 50679476 - 50679388
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||| ||| |||||| ||| |          ||||||||||||||||||||||||    
T  50679476 cttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 50679388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 8181993 - 8182049
Alignment:
Q  90 cttaattgcacttttcccccctatc-ttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||| ||||||||| |||||| |||||||||| |||||| ||||||    
T  8181993 cttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccccctc 8182049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 9380793 - 9380745
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  9380793 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 9380745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 24775835 - 24775787
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||| |||||||||||  |||||||||| ||||||    
T  24775835 cttaattgcacttttccctcctatcttttgtcaattgtgcgattttgca 24775787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 25161880 - 25161928
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  25161880 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 25161928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 28196348 - 28196396
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  28196348 cttaattgcacttttcccccctataatttgccaattgtgcgattttgca 28196396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 28196825 - 28196777
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  28196825 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 28196777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 32703702 - 32703654
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  32703702 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 32703654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 36095819 - 36095867
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  36095819 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgca 36095867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 39415576 - 39415524
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    ||||| ||||||||| ||| |||||||||||||||||||| | ||||||||||    
T  39415576 cttaactgcactttttccctctatcttttgctaattgtgcaattttgcatccc 39415524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 9380309 - 9380356
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgc 137  Q
    ||||||||||||||||||||||||  ||||| |||||||||| |||||    
T  9380309 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 9380356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 22681577 - 22681631
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||| |||||||||||||||  |||||||||| |||||| ||||||    
T  22681577 cttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcaccccctc 22681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 47219252 - 47219205
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||| ||||| || |||||||||||||||||||||| ||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgca 47219205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 49178535 - 49178574
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgc 129  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  49178535 cttaattgcacttttctcccatatcttttgctaattgtgc 49178574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 292784 - 292834
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatc 140  Q
    ||||||||||||||||||||||||  ||||| |||||||| | ||||||||    
T  292784 cttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatc 292834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 5206287 - 5206234
Alignment:
Q  84 aaatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||||||| ||||||    
T  5206287 aaatggcttaattgcacttttcccccttatctttt-ttaattgtgcgattttgca 5206234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 13198606 - 13198660
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||| ||  |||||||||| |||||||||| |||||| ||||||    
T  13198606 ttaattgcacttttctcctttatcttttgccaattgtgcgattttgcaccccctc 13198660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 16555743 - 16555697
Alignment:
Q  93 aattgcacttttcccccctatc-ttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgca 16555697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 22119929 - 22119860
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaat 87  Q
    ||||| |||||| |||||||||| | ||||||  || ||||||||||||| |||| |||||||||||||||    
T  22119929 tgtgccaatttt-cagttttcgttcctttttcgagcgttcttccgtcttgcaatgacttggaacttgaaat 22119860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 23353921 - 23353856
Alignment:
Q  24 attttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||||| ||||||| |||||||  || || ||| || ||| ||||||||||||||||||||||    
T  23353921 attttgcagctttcgtcattttttcgagcgtttttctgttttgcaatgccttggaacttgaaatga 23353856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 32703227 - 32703268
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    ||||||||||||||||||||||||  ||||| ||||||||||    
T  32703227 cttaattgcacttttcccccctataatttgccaattgtgcga 32703268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 43051304 - 43051216
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||| ||||| |||||||||||||| ||||||| || |||||| ||| |          ||||||||||||||||||||||||    
T  43051304 cttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 43051216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 4239418 - 4239370
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||| ||||||||  ||||| |||||||||| ||||||    
T  4239418 cttaattgcactttttccccctatagtttgccaattgtgcgattttgca 4239370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 5205990 - 5206038
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| |||||||||||| |||||  |||| ||||||    
T  5205990 cttaattgcacttttcctccctatcttttgttaatttggcgattttgca 5206038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 8182174 - 8182222
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| |||||||||||||||||||||| |||||||  | ||||||||||    
T  8182174 ggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaatt 8182222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 9023246 - 9023294
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| |||||||  ||||| |||||||||| ||||||    
T  9023246 cttaattgcacttttctcccctatagtttgccaattgtgcgattttgca 9023294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 9023732 - 9023684
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  9023732 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 9023684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 11529170 - 11529218
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| ||||| ||||||| ||||||| || ||||||    
T  11529170 cttaattgcacttttcctccctaacttttgccaattgtgtgattttgca 11529218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 24775689 - 24775633
Alignment:
Q  272 aaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatg 328  Q
    ||||||||||||||  |||||| |||||||||| |||||||||| || |||| ||||    
T  24775689 aaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaacacaaggatg 24775633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 26207798 - 26207750
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| |||||||||||||  ||||| |||||||||| ||||||    
T  26207798 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgca 26207750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 39744517 - 39744469
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  39744517 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 39744469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 43292409 - 43292357
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||| ||||||||||| |  ||||| |||||||||| ||||||||||    
T  43292409 cttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatccc 43292357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 1120 - 1388
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| ||||||||||| ||||||    
T  1120 cttaattgcactttttccccctatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaattgtgt 1219  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||||||         ||| || |||| |||||||||||||||||    
T  1220 tttgttcaaaatcatcattaaaagagggggaaaagggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 1319  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  1320 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 1388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 1472 - 1384
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  1472 cttaattgcactttttccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 131; Significance: 7e-68; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 155 - 357
Target Start/End: Original strand, 25134 - 25337
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nn 253  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||       
T  25134 gagcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaagagaggaaaaggggctaaagatagggtgcaaaattgctcaaa 25233  T
Q  254 nnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaa 353  Q
         |||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||| |||| ||    
T  25234 aaaaagaagagaaggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaatggggcaa 25333  T
Q  354 aaag 357  Q
    ||||    
T  25334 aaag 25337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 25421 - 25333
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  25421 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 25333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Original strand, 25371 - 25418
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  25371 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 25418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 131; Significance: 7e-68; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 90 - 339
Target Start/End: Complemental strand, 439251 - 439002
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||         ||||||||||||||||||||||||| || ||||||    
T  439251 cttaattgcactttttccccttatcttttgctaattgtgcgattttgcatcccctcttttttt--gagcgattttgcaccccatcttttgtcaattgtgt 439154  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaa-tgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||        ||||||||| || ||||| ||||||||||    
T  439153 tttcttcaaaatcatcattaaaagagaggaaaagggggctaaagatagggtgcaaaatcgctcaaaaaaaagaagagaagatgcaaaattgcacaattag 439054  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaat 339  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||||||||    
T  439053 caaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaat 439002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 91 - 315
Target Start/End: Original strand, 183367 - 183590
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgtt 190  Q
    ||||||||||||||||||| |||||||||  |||||| ||| |||||| || |||         ||||||||||||||| ||| |||||||| |||||||    
T  183367 ttaattgcacttttccccc-tatcttttgtcaattgtacgattttgcaccctctcttcttttttgagcgattttgcacctcatattttgccaattgtgtt 183465  T
Q  191 ttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagcaa 290  Q
    ||||||||||||||||||||||||| ||||   |||| |||||||||||| ||||||||||        ||||   | || |||||||||||||| | ||    
T  183466 ttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggtgaaaaatcgctcaaaaaaataagacgggttgcaaaatcgcacaattggtaa 183565  T
Q  291 aaagatagggggcagaagtgcaatt 315  Q
    |||||||||||||| ||||||||||    
T  183566 aaagatagggggcaaaagtgcaatt 183590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 438932 - 439019
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttt 177  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||         |||||||||||||||||||||||    
T  438932 cttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatcttt 439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 183714 - 183660
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  183714 cttaattgcacttttcccccctatattttgctaattgtgcga-tttgcaccccctc 183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 315
Target Start/End: Complemental strand, 438982 - 438935
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  438982 ggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 438935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 3e-67; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 90 - 355
Target Start/End: Original strand, 22149405 - 22149668
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||| ||||||| | ||||||||||| |||||| ||||||         ||||||||||||||||||||||||| || |||||     
T  22149405 cttaattgcacttttccccc-tatctttgg-taattgtgcgattttgcaccccctctttttttt-gagcgattttgcaccccatcttttgtcaattgtgc 22149501  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||        |||||||||||| |||||||||||||||||    
T  22149502 tttgttcaaaatcatcattaaaagagaggaaaaggggttaaagatagggtgcaaaatcgctcaaaaaaaagaagagaaggtgcaaaatcgcacaattagc 22149601  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaa 355  Q
    ||||||||| |||||| |||||||||| || |||||||||||||||||||| ||||||||| |||||    
T  22149602 aaaaagataaggggcaaaagtgcaattaaacacaaagatggggtgcaaaatcagaaaggggcaaaaa 22149668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 91 - 357
Target Start/End: Original strand, 8108724 - 8108990
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgtt 190  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||| |||||          |||||||||||||||| |||||||||||  ||||||    
T  8108724 ttaattgcacttttcctccctatcttttgttaattgtgcgattttgcaccccct-tttttttttgagcgattttgcaccctatcttttgccaactgtgtt 8108822  T
Q  191 ttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||         ||| || |||||||||||||||||||||||    
T  8108823 ttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgaaaaatcgctcaaaaaatataagtgagggtgtaaaatcgcacaattagca 8108922  T
Q  290 aaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||| |||||| ||||||||||||| |||||||||||||||||||| | |||||||| ||||||    
T  8108923 aaaagatatggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaag 8108990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 17518305 - 17518572
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||| |||||||  ||||||||| ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  17518305 cttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 17518403  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||         ||| || |||| |||||||||||||||||    
T  17518404 tttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagataggatgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 17518503  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  17518504 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 17518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 47955660 - 47955392
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||| ||||||         |||||||||||||||| |||||||||||  |||||    
T  47955660 cttaattgcacttttcccccctatcttttattaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 47955561  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||         ||  || |||| |||||||||||||||||    
T  47955560 tttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatagggtgcaaaatcgctcaaaaaatataattgagggtgcaaaatcgcacaattagc 47955461  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| ||| || ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  47955460 aaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaag 47955392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 41083262 - 41082994
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnng-agcgattttgcaccccatcttttgccagttgtg 188  Q
    |||||||||||||||||||| ||||||||| || |||||||| |||||| ||||||           ||||||||||||||| || ||||||||  ||||    
T  41083262 cttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcaccccctctttttttttttagcgattttgcacccaatattttgccaactgtg 41083164  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||         ||| || |||| ||||||||||||||||    
T  41083163 ttttgttcaaaatcatcattaaaagagaggaaaaggggcaaaagatagggtgcaaaattgctcaaaaaatataagtgagggtgcaaaatcgcacaattag 41083064  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
     ||||||||| |||||| |||| |||||||| |||||||||||||||||||| |||||||||| ||||||    
T  41083063 taaaaagataaggggcaaaagtacaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 41082994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 90 - 315
Target Start/End: Complemental strand, 31848244 - 31848021
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||| ||||||||||||| ||||||| ||| |||||| ||||||         ||||||||||||||||||||||||| || ||||||    
T  31848244 cttaattgcacttttctcccctatcttttgttaattgtacgattttgcaccccctcttttttc--gagcgattttgcaccccatcttttgtcaattgtgt 31848147  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    ||||||||||||||||||||||||||  ||||  |||| ||| || ||||||||||||||||        ||||||  | || |||||||||||||| ||    
T  31848146 tttgttcaaaatcatcattaaaagaggagaaatggggcaaaacatggggtgcaaaatcgctcaaaaaaaagaagag-ggatgcaaaatcgcacaattggc 31848048  T
Q  289 aaaaagatagggggcagaagtgcaatt 315  Q
    |||||||||| ||||| ||||||||||    
T  31848047 aaaaagatagagggcaaaagtgcaatt 31848021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 1176998 - 1176905
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct 250  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||| |||||||||| || ||  |||| |||||| |||||||||||||||    
T  1176998 agcgatttcgcaccccatcttttgtcaattgtgttttgttcaaaatcattattaaaagag-gggaatggggcaaaagatggggtgcaaaatcgct 1176905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 46057182 - 46057085
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgtttt-gttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc 251  Q
    ||||| |||| |||||  |||||||||| ||||||||| ||||||||||||||||||||||| |||||  |||| |||||| ||||||||||||||||    
T  46057182 gagcggttttacaccctttcttttgccaattgtgttttagttcaaaatcatcattaaaagaggggaaagggggcaaaagatcgggtgcaaaatcgctc 46057085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 47955308 - 47955396
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  47955308 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 47955396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 22149750 - 22149703
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22149750 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgca 22149703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 8109045 - 8108997
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  8109045 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 8108997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 13589710 - 13589656
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  13589710 cttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcaccccctc 13589656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 41082911 - 41082966
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  41082911 cttaattgtactttttccccctatcttttgccaattgtgcgattttgcatcccctc 41082966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 17518656 - 17518599
Alignment:
Q  87 tgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||    
T  17518656 tgacttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctc 17518599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 1176714 - 1176770
Alignment:
Q  85 aatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  1176714 aatggcttaattgcacttt-cccccctatattttgctaattgtgcgattttgcatccc 1176770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 49284411 - 49284499
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  49284411 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 49284499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 48190773 - 48190821
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  48190773 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgca 48190821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 31847898 - 31847949
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    ||||||||||||| ||||| ||||||||||||||||||| | ||||||||||    
T  31847898 ttaattgcactttacccccttatcttttgctaattgtgcaattttgcatccc 31847949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 1177069 - 1177016
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccct 144  Q
    |||||||||||||||| |||||||||| ||||||||||| | |||||| |||||    
T  1177069 ttaattgcacttttcctccctatctttcgctaattgtgcaattttgcaccccct 1177016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 1176839 - 1176930
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnng-agcgattttgcaccccatcttttgcc 181  Q
    |||||||||||||| ||||||||||||||  |||||||| | |||||| ||||||         | ||||||||||||||||||||||||||    
T  1176839 ttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcaccccctctttttttttgtagcgattttgcaccccatcttttgcc 1176930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 9347128 - 9347176
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  9347128 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 9347176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 27172593 - 27172541
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||||||||||| |  ||||| |||||||||| ||||||||||    
T  27172593 cttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatccc 27172541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 32163095 - 32163047
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  32163095 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 32163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 39692052 - 39692004
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||| |||||  |||||||||| ||||||    
T  39692052 cttaattgcacttttcccccctatattttgtcaattgtgcgattttgca 39692004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 44911027 - 44911075
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||| ||||||||| |||||| |||||||||| ||||||    
T  44911027 cttaattgcactttccccccctatattttgccaattgtgcgattttgca 44911075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 48191407 - 48191359
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| |||||||||||||| ||| |||||| ||||||    
T  48191407 cttaattgcacttttcacccctatcttttgccaatggtgcgattttgca 48191359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 46823846 - 46823893
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 46823893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 50430132 - 50430085
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 50430085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 19257610 - 19257680
Alignment:
Q  17 tgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaat 87  Q
    ||||| |||||||  |||||| ||| ||||||  ||||| |||||||||| |||||||||||| |||||||    
T  19257610 tgtgcaaattttgttgttttcttccctttttcgagcatttttccgtcttgcaatgccttggaaattgaaat 19257680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 6002239 - 6002327
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||  ||||||| || |||||| ||| |          ||||||||||||||||||||||||    
T  6002239 cttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 6002327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 15416776 - 15416824
Alignment:
Q  33 ttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaactt 82  Q
    ||||||||||||||  | |||||||||||||||||||||||||| |||||    
T  15416776 ttttcgtcctttttcga-gcattcttccgtcttgaaatgccttgaaactt 15416824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 22149700 - 22149748
Alignment:
Q  266 aggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    ||||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  22149700 aggtgcaaaatcgcacaattagc-aaaagataggggggaaaagtgcaatt 22149748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 46056905 - 46056951
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||  |||||||||||||||||||| ||||| ||||||    
T  46056905 cttaattgcacttt--ccccctatcttttgctaattttgcgattttgca 46056951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 50526525 - 50526476
Alignment:
Q  89 acttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| ||||||||  ||||| |||||||||| ||||||    
T  50526525 acttaattgcactttttccccctatagtttgccaattgtgcgattttgca 50526476  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 13918919 - 13918871
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| ||||||  ||||| |||||||||| ||||||    
T  13918919 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 13918871  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 22149630 - 22149582
Alignment:
Q  91 ttaattgcacttttcccccctatctttt-gctaattgtgcgactttgca 138  Q
    |||||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  22149630 ttaattgcacttttgccccttatctttttgctaattgtgcgattttgca 22149582  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 25126750 - 25126718
Alignment:
Q  57 ttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||||||||| ||||||||||||||||||||||    
T  25126750 ttccgtcttgcaatgccttggaacttgaaatga 25126718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 82
Target Start/End: Complemental strand, 31313825 - 31313797
Alignment:
Q  54 ttcttccgtcttgaaatgccttggaactt 82  Q
    |||||||||||||||||||||||||||||    
T  31313825 ttcttccgtcttgaaatgccttggaactt 31313797  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 31848019 - 31848071
Alignment:
Q  91 ttaattgcacttttcccccctatc-ttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||| ||| ||||| |||||| |||||||||| ||||||||||    
T  31848019 ttaattgcacttttgccctctatctttttgccaattgtgcgattttgcatccc 31848071  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 48105168 - 48105120
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||| |||  ||||| |||||||||| ||||||    
T  48105168 cttaattgcacttttcccccttatagtttgccaattgtgcgattttgca 48105120  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 49318217 - 49318166
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    |||||||||||||| |||||||||  ||||| |||||||||| ||||||||||    
T  49318217 cttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcatccc 49318166  T

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Target: chr7 (Bit Score: 129; Significance: 1e-66; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 9412025 - 9412293
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||         |||||||||| ||||| |||||||||||  |||||    
T  9412025 cttaattgcacttttcccccttatcttttgttaattgtgcgattttgcaccccctctttttttttgagcgattttccaccctatcttttgccaactgtgt 9412124  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||         ||| || |||| ||||||||||| |||||    
T  9412125 tttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacagttagc 9412224  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||||||||  ||||||||| ||||||    
T  9412225 aaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaaaag 9412293  T

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Target: chr7; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 13772683 - 13772874
Alignment:
Q  159 gattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc--nnnnn 256  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||           
T  13772683 gattttgcaccccatcttttgtcaattgtgttttgttcaaaatcatcattaaaatagaggaaaaggggctaaagatagggtgcaaaatcgctcaaaaaaa 13772782  T
Q  257 nngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaaggg 348  Q
      |||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||||||||    
T  13772783 aagaagagaaggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgaaaaattagaaaggg 13772874  T

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Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 90 - 357
Target Start/End: Original strand, 3687355 - 3687625
Alignment:
Q  90 cttaattgcacttttcccccc-tatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttgt 187  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||          |||||||||||||||| |||||||||||  |||    
T  3687355 cttaattgcacttttccccccctatcttttgttaattgtgcgattttgcaccccctcttttttttttgagcgattttgcaccctatcttttgccaactgt 3687454  T
Q  188 gttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaatta 286  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||||||||||         ||| || ||||||||||||||||||||    
T  3687455 gttttgttcaaaatcatcattaaaagaggggaaaaagggcaaaagatggggtgcaaaatcgctcaaaaaatataagtgagggtgtaaaatcgcacaatta 3687554  T
Q  287 gcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||| ||| ||| || ||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  3687555 gcaaaaaaataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaag 3687625  T

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Target: chr7; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 156 - 357
Target Start/End: Original strand, 6908280 - 6908482
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnn 254  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||        
T  6908280 agcgattttgcactctatcttttgccaattgtgttttgttcaaaatcatcattaaaagagaggaaaaatggctaaagatagggtgcaaaatcgctcaaaa 6908379  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaa 354  Q
        |||||   |||| ||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||||| ||||||| || |||    
T  6908380 agaagaagaatgggtgcaaaatcgcacaattagcaaaaagatagggggtaaaagcgcaattgaacacaaagatggggtgcaaaatcagaaaggaggcaaa 6908479  T
Q  355 aag 357  Q
    |||    
T  6908480 aag 6908482  T

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Target: chr7; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 155 - 357
Target Start/End: Original strand, 5349527 - 5349730
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nn 253  Q
    ||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||       
T  5349527 gagcgattttgcaccccatcttttgtcaaccgtgttttgttcaaaatcatcattaaaagagggggaaatgggcaaaagatggggtgcaaaatcgctcaaa 5349626  T
Q  254 nnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaa 353  Q
         ||||||   ||| ||||| |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||    
T  5349627 aaaaagaagagggagtgcaaaattgcacaatatgcaaaaagatagggggcaaaagtgcaattgaatacaaagatggggtgcaaaatcagaaagggggtaa 5349726  T
Q  354 aaag 357  Q
    ||||    
T  5349727 aaag 5349730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 155 - 348
Target Start/End: Original strand, 15567056 - 15567248
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnn 254  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| | |||| |||| |||||| || || ||||||||||       
T  15567056 gagcgattttgcaccccatcttttgtcaattgtgttttgttcaaaatcagcattaaaagagggaaaaaggggcaaaagatgggatgaaaaatcgctcaaa 15567155  T
Q  255 nnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaaggg 348  Q
         |||||| | || |||||| ||||||||||||||||| |||||||| | ||||||||||| |||||||||||||||||||| ||||||||    
T  15567156 aaaa-aagagaggatgcaaaatcacacaattagcaaaaagagagggggcaaacgtgcaattgaacacaaagatggggtgcaaaatcagaaaggg 15567248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 90 - 315
Target Start/End: Complemental strand, 23686769 - 23686546
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||   ||||||         ||||||||||||||||||||||||||||  |||||    
T  23686769 cttaattgcactttttccccctatcttttgctaattgtgcgattttga--cccctcttttttttggagcgattttgcaccccatcttttgccaaatgtgt 23686672  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagca 289  Q
    |||||||||||||||||||||||||| || || ||||  |||||| |||||||||||||||        ||||||  |||||||||| ||| ||||   |    
T  23686671 tttgttcaaaatcatcattaaaagagggggaattgggtgaaagatggggtgcaaaatcgctaaaaaaaagaagagggggtgtaaaattgcaaaattgaga 23686572  T
Q  290 aaaagatagggggcagaagtgcaatt 315  Q
    ||||||||||||||| ||||||||||    
T  23686571 aaaagatagggggcaaaagtgcaatt 23686546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 29291805 - 29291965
Alignment:
Q  87 tgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttg 186  Q
    |||||||||||||||||| | |||||||||||| ||||| ||||| |||||| ||||||         |||||||||| ||||||||||||||||| |||    
T  29291805 tgacttaattgcactttttctccctatcttttgataattatgcgattttgcaccccctcttttttttagagcgattttacaccccatcttttgccaattg 29291904  T
Q  187 tgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatc 247  Q
    ||||||||||||||||||||||||||||| |||||  |||| |||||| ||||||||||||    
T  29291905 tgttttgttcaaaatcatcattaaaagaggggaaagagggcaaaagatggggtgcaaaatc 29291965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 315
Target Start/End: Complemental strand, 27096392 - 27096170
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgtt 190  Q
    ||||||||||||||||||| |||||||||  ||||||| || |||||||||||||         ||||||||||||||||||| |||||||| |||||||    
T  27096392 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctcttcttttttgagcgattttgcaccccatattttgccaattgtgtt 27096294  T
Q  191 ttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagcaa 290  Q
    ||||||||||||||||||||||||| ||||   |||| |||||||||||| ||||| ||||        |||||  | || |||||||||||||| | ||    
T  27096293 ttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggtgaaaaattgctcaaaaaaa-aagaggggttgcaaaatcgcacaattggtaa 27096195  T
Q  291 aaagatagggggcagaagtgcaatt 315  Q
    |||||||||||||| ||||||||||    
T  27096194 aaagatagggggcaaaagtgcaatt 27096170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 315
Target Start/End: Original strand, 27181911 - 27182133
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgtt 190  Q
    ||||||||||||||||||| |||||||||  ||||||| || |||||||||||||         ||||||||||||||||||| |||||||| |||||||    
T  27181911 ttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgcatcccctcttcttttttgagcgattttgcaccccatattttgccaattgtgtt 27182009  T
Q  191 ttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaaggtgtaaaatcgcacaattagcaa 290  Q
    ||||||||||||||||||||||||| ||||   |||| |||||||||||| ||||| ||||        |||||  | || |||||||||||||| | ||    
T  27182010 ttgttcaaaatcatcattaaaagaggggaaggggggcaaaagatagggtgaaaaattgctcaaaaaaa-aagaggggttgcaaaatcgcacaattggtaa 27182108  T
Q  291 aaagatagggggcagaagtgcaatt 315  Q
    |||||||||||||| ||||||||||    
T  27182109 aaagatagggggcaaaagtgcaatt 27182133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 169 - 357
Target Start/End: Original strand, 34235759 - 34235947
Alignment:
Q  169 cccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnngaagagaagg 268  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||||   |||| |||||| |||||||||||||||         |||||  ||    
T  34235759 cccatcttttgccaattgtgttttgttcaaaatcatctttaaaagaggggaatgggggcaaaagatggggtgcaaaatcgctaaaaaaaataagaggggg 34235858  T
Q  269 tgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||  |||||| |||||| | |||||||||||||||| |||||||||| || |||||||||||||||| ||| ||||| |||| ||||||    
T  34235859 tgcgaaatcgaacaatttgaaaaaagatagggggcaaaagtgcaattaaacacaaagatggggtgcagaatcagaaatggggcaaaaag 34235947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 161 - 357
Target Start/End: Original strand, 35080023 - 35080220
Alignment:
Q  161 ttttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc--nnnnnnn 258  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||||||  ||||| |||| |||||  | ||||||||||||||             
T  35080023 ttttgcaccccatcttttgacaattgtgttt-gttcaaaatcatcattaaaagaggtgaaaaggggcaaaagaatgagtgcaaaatcgctcaaaaaaaaa 35080121  T
Q  259 gaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||  | || |||||||||||||||||  |||||||||||||| |||  |||||||| ||||||||| |||||||||| ||||||| || ||||||    
T  35080122 gaagaggggatgcaaaatcgcacaattagcttaaagatagggggcaaaagcacaattgaacacaaagatgaggtgcaaaatcagaaaggaggcaaaaag 35080220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 348
Target Start/End: Complemental strand, 33628674 - 33628473
Alignment:
Q  157 gcgattttgcaccccatcttttgccagttgtgttttgttcaaaa-tcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgct----- 250  Q
    |||||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||||| |||||||||||| ||| |||||||| |         
T  33628674 gcgattttgcaccccatcttttgccaattgttttttgttaaaaaatcatcattaaaagagaggaaaaggggctaaagataaggttcaaaatcgataaaaa 33628575  T
Q  251 ----cnnnnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaag 346  Q
                 ||||  ||||| ||||| ||||||||||||||||||||||| ||| | ||||||||||| |||| ||||||||||||||| ||||||    
T  33628574 aaaaaaaaaaaaaaagacgaggtgcaaaattgcacaattagcaaaaagatagggtgcaaatgtgcaattgaacacaaggatggggtgcaaaatcagaaag 33628475  T
Q  347 gg 348  Q
    ||    
T  33628474 gg 33628473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 9412377 - 9412289
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  9412377 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 9412289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 155 - 301
Target Start/End: Complemental strand, 38191548 - 38191401
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc--n 252  Q
    ||||||||||||| || || ||||| || |||||||||||||||||||||||||||||||| ||  || |||| |||||| |||| |||||| ||||       
T  38191548 gagcgattttgcatcctattttttgtcaattgtgttttgttcaaaatcatcattaaaagagggggtaaggggcaaaagatggggt-caaaattgctcaaa 38191450  T
Q  253 nnnnnngaagagaaggtgtaaaatcgcacaattagcaaaaagatagggg 301  Q
          |||||| ||||| |||||||||||||| |||||||||||||||    
T  38191449 aaaacagaagaggaggtgcaaaatcgcacaattggcaaaaagatagggg 38191401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 3687708 - 3687621
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  3687708 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctc-ttttttttgagcgattttgcaccccatctttt 3687621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 250
Target Start/End: Complemental strand, 5735533 - 5735438
Alignment:
Q  156 agcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggct-aaagatagggtgcaaaatcgct 250  Q
    |||||||||||||| ||| | |||||| |||| ||||||||||||||||||||||||||| || ||| ||| | |||||| | |||||||||||||    
T  5735533 agcgattttgcacctcatatcttgccaattgtattttgttcaaaatcatcattaaaagagggggaaagggggtaaaagatggtgtgcaaaatcgct 5735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 13772953 - 13772898
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  13772953 cttaattgcacttttcccccctatcatttgctaattgtgcgattttgcaccccctc 13772898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 315
Target Start/End: Original strand, 18925128 - 18925279
Alignment:
Q  160 attttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctcnnnnnnng 259  Q
    |||||||||||||| ||||| || |||||||||||||||||||||||||||||||| |||||| |||| | | || || |||||||||           |    
T  18925128 attttgcaccccatattttgtcaattgtgttttgttcaaaatcatcattaaaagag-ggaaaaagggcaacaaatcggatgcaaaatcaa--aaaaacag 18925224  T
Q  260 aagagaaggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaatt 315  Q
    |||||  |||| |||||||||||||| |||||||||||||||||| |||| |||||    
T  18925225 aagagg-ggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatt 18925279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 44599491 - 44599579
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  44599491 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 44599579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 44600187 - 44600099
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  44600187 cttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 44600099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 5735254 - 5735302
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  5735254 cttaattgcacttttctcccctatctttggctaattgtgcgattttgca 5735302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 13772643 - 13772691
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  13772643 cttaattgcacttttcctccctatcttttgctaattgtgtgattttgca 13772691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 18925064 - 18925183
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||||  |||||||||||||||||||||| | ||||||   |||           | | |||||||||||||| ||||| || ||||||    
T  18925064 cttaattgcacttttcttccctatcttttgctaattgtgcaattttgca---cct---tttttttaaccaattttgcaccccatattttgtcaattgtgt 18925157  T
Q  190 tttgttcaaaatcatcattaaaagag 215  Q
    ||||||||||||||||||||||||||    
T  18925158 tttgttcaaaatcatcattaaaagag 18925183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 29292924 - 29292976
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||||||    
T  29292924 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatccc 29292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 24596814 - 24596880
Alignment:
Q  22 gaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||| ||||||||||| || |||| ||||||||||| ||||||| ||||||||||||||| ||||||    
T  24596814 gaattatgcagttttcgaccatttt-cacgcattctttcgtcttgcaatgccttggaacttcaaatga 24596880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 9035350 - 9035297
Alignment:
Q  85 aatgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||| ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  9035350 aatggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 9035297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 13863315 - 13863403
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||| ||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  13863315 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 13863403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 13864008 - 13863967
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  13864008 cttaattgcacttttcacccctatcttttgccaattgtgcga 13863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 33628395 - 33628451
Alignment:
Q  88 gacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||||| ||  ||||||||||||||||||| | |||||||||||||    
T  33628395 gacttaattgcacttttctcct-tatcttttgctaattgtgcaattttgcatcccctc 33628451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 10533036 - 10533084
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  10533036 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 10533084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 34236033 - 34235977
Alignment:
Q  87 tgacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccc 143  Q
    ||||||||||| | |||||||  |||||||||||||||||||||| |||||| ||||    
T  34236033 tgacttaattgtatttttcccttctatcttttgctaattgtgcgattttgcaccccc 34235977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 37888835 - 37888883
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  37888835 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 37888883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 37889311 - 37889263
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  37889311 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 37889263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 37972448 - 37972400
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  37972448 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 37972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 6908534 - 6908488
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  6908534 ttaattgcacttt-cccccctattttttgctaattgtgcgattttgca 6908488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 8953940 - 8953886
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    |||||||||||||||||||| ||||||||| ||||||||| | |||||| ||||||    
T  8953940 cttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcaccccctc 8953886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 122
Target Start/End: Complemental strand, 15567322 - 15567291
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgcta 122  Q
    ||||||||||||||||||||||||||||||||    
T  15567322 ttaattgcacttttcccccctatcttttgcta 15567291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 89
Target Start/End: Complemental strand, 18496838 - 18496803
Alignment:
Q  54 ttcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18496838 ttcttacgtcttgaaatgccttggaacttgaaatga 18496803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 20418891 - 20418938
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgca 20418938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 27096049 - 27096099
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcc 141  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||| ||||    
T  27096049 cttaattgcacttt-cccccctatattttgctaattgtgcgattttgtatcc 27096099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 27182254 - 27182204
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcc 141  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||| ||||    
T  27182254 cttaattgcacttt-cccccctatattttgctaattgtgcgattttgtatcc 27182204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 42418593 - 42418644
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcc 141  Q
    ||||||| ||||||||||||||||  |||||||||||||||| |||| ||||    
T  42418593 cttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcc 42418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 1074726 - 1074688
Alignment:
Q  54 ttcttccgtcttgaaatgccttggaacttgaaatgactt 92  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  1074726 ttcttccgtcttgaaatgtcttggaacttgaaattactt 1074688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 8308847 - 8308912
Alignment:
Q  23 aattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    ||||||||||||||| ||| ||||| | || ||||||||||||| ||| ||||||||||||| ||||    
T  8308847 aattttgcagttttcctccctttttga-gcgttcttccgtcttgcaataccttggaacttgatatga 8308912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 8953859 - 8953817
Alignment:
Q  184 ttgtgttttgttcaaaatcatcattaaaagagaggaaaatggg 226  Q
    ||||||||||||||||||||||||||||| |  ||||||||||    
T  8953859 ttgtgttttgttcaaaatcatcattaaaataagggaaaatggg 8953817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 35079962 - 35079999
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtg 128  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  35079962 cttaattgcacttttcccc-ctatcttttgctaattgtg 35079999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 38191265 - 38191315
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcc 141  Q
    |||||||||||||||| |  ||||||||||||||| ||||| |||||||||    
T  38191265 ttaattgcacttttcctctttatcttttgctaattatgcgattttgcatcc 38191315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 5735598 - 5735553
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttg 136  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||    
T  5735598 ttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 8643818 - 8643730
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    ||||||||||||||||  ||||||||||| | |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  8643818 cttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttt 8643730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 9034869 - 9034910
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    ||||||||||||||||||||||||  ||||| ||||||||||    
T  9034869 cttaattgcacttttcccccctataatttgccaattgtgcga 9034910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 23686423 - 23686459
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgt 127  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  23686423 cttaattgcacttttcccc-ctatcttttgctaattgt 23686459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 33628709 - 33628664
Alignment:
Q  93 aattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||||    
T  33628709 aattgcactttttccctctatcttttactaattgtgcgattttgca 33628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 3205145 - 3205097
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  3205145 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 3205097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 6908215 - 6908262
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||||||||||||| ||||| ||| ||||||||||| ||||||    
T  6908215 cttaattgcacttttccccc-tatctattgttaattgtgcgattttgca 6908262  T

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Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 17156969 - 17157017
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  17156969 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 17157017  T

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Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 20419376 - 20419328
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  20419376 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 20419328  T

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Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 22740158 - 22740206
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||    
T  22740158 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgca 22740206  T

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Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 29293398 - 29293350
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| |||||||||||||  ||||| |||||||||| ||||||    
T  29293398 cttaattgcatttttcccccctatagtttgccaattgtgcgattttgca 29293350  T

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Target: scaffold0015 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 90 - 357
Target Start/End: Complemental strand, 17207 - 16939
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttgtg 188  Q
    |||||||||||||||||||| ||||||||||||||||||| | |||||| | ||||          |||||||||||||||||||||||||||| |||||    
T  17207 cttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcaccgcctcttttttttttgagcgattttgcaccccatcttttgccaattgtg 17109  T
Q  189 ttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattag 287  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||| ||        ||||||| |||| ||||||| ||||||||    
T  17108 ttttgttcaaaatcatccttaaaagagaggaaaaggggctaaagataaggtgcgaaatcgttcaaaaaaaagaagagagggtgcaaaatcgtacaattag 17009  T
Q  288 caaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
      |||||||||||| || ||||||||||||| | ||||| || ||||||||| |||||||| | ||||||    
T  17008 agaaaagataggggacaaaagtgcaattgaacaaaaagacggagtgcaaaatcagaaagggaggaaaaag 16939  T

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Target: scaffold1221 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 350
Target Start/End: Complemental strand, 1834 - 1574
Alignment:
Q  91 ttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnn-gagcgattttgcaccccatcttttgccagttgtgt 189  Q
    ||||||||||||||||||| ||||||||| | ||||||||| |||||| | ||||          |||||||||||||||| |||||||||||  |||||    
T  1834 ttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctcctcttttctttttgagcgattttgcaccctatcttttgccaactgtgt 1736  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgctc-nnnnnnngaagagaaggtgtaaaatcgcacaattagc 288  Q
    |||||| ||||||||||||||||||| |||||  |||| ||| || ||||||||||||||||         ||| || |||| |||||||||||||||||    
T  1735 tttgtttaaaatcatcattaaaagaggggaaatggggcaaaatatggggtgcaaaatcgctcaaaaaatataagtgagggtgcaaaatcgcacaattagc 1636  T
Q  289 aaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaaggggg 350  Q
    ||||||||| | | || ||||||||||||| |||||||||||||||||||| ||||||||||    
T  1635 aaaaagataagagacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggg 1574  T

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Target: scaffold0110 (Bit Score: 89; Significance: 8e-43; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 90 - 249
Target Start/End: Original strand, 45539 - 45697
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||  |||||         |||||||||||||||| |||||||||||  |||||    
T  45539 cttaattgcacttttccccc-tatcttttgttaattgtgcgattttgcactccctctttttttttgagcgattttgcaccctatcttttgccaactgtgt 45637  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcgc 249  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  45638 tttgttcaaaatcatcattaaaagaggggaaaatgggcaaaagatagggtgcaaaatcgc 45697  T

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Target: scaffold0110; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 267 - 357
Target Start/End: Original strand, 45685 - 45775
Alignment:
Q  267 ggtgtaaaatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||| |||||||||||||||||||||||||| ||| || ||||||||||||| ||||||||| |||||||||| |||||||||| ||||||    
T  45685 ggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaag 45775  T

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Target: scaffold0110; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 45858 - 45771
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||         ||||||||||||||||||||||||    
T  45858 cttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcaccccctctttttttttgagcgattttgcaccccatctttt 45771  T

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Target: scaffold0002 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 412090 - 412007
Alignment:
Q  274 aatcgcacaattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| |||||||||| ||||||    
T  412090 aatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatcagaaagggggcaaaaag 412007  T

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Target: scaffold0598 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 88 - 247
Target Start/End: Original strand, 6607 - 6763
Alignment:
Q  88 gacttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgt 187  Q
    |||||||||||||| ||||||||||||||||| |||||||| || ||||||   ||||          ||||||||||||||| |||||||||||  |||    
T  6607 gacttaattgcactgttcccccctatcttttgttaattgtgtgattttgca---cctctcttttttttagcgattttgcaccctatcttttgccaactgt 6703  T
Q  188 gttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatc 247  Q
    |||||||||||||||||||||||||||| || ||| |||| | |||| ||||||||||||    
T  6704 gttttgttcaaaatcatcattaaaagagggggaaaggggcaagagatggggtgcaaaatc 6763  T

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Target: scaffold0598; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 357
Target Start/End: Original strand, 6768 - 6843
Alignment:
Q  282 aattagcaaaaagatagggggcagaagtgcaattgaatacaaagatggggtgcaaaattagaaagggggaaaaaag 357  Q
    |||||||||||| ||| |||||| ||||||||||||| |||||||||||||||||||| |||||||| | ||||||    
T  6768 aattagcaaaaaaataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggagcaaaaag 6843  T

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Target: scaffold0009 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 248
Target Start/End: Original strand, 205689 - 205844
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatcttttgccagttgtgt 189  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| |||||| ||||||         || |||||||||||| |||||||||||| ||||||    
T  205689 cttaattgcatttttctccc-tatcttttgctaattgtgcgattttgcaccccctcttttttt--gaacgattttgcacctcatcttttgccaattgtgt 205785  T
Q  190 tttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcg 248  Q
    ||||||||||||||| || ||||||| |||||  |||| |||||| || ||||||||||    
T  205786 tttgttcaaaatcataatcaaaagaggggaaatggggcaaaagatgggatgcaaaatcg 205844  T

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Target: scaffold0433 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 10690 - 10783
Alignment:
Q  155 gagcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagagaggaaaatgggctaaagatagggtgcaaaatcg 248  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||   ||  |||||| |||||||||||||    
T  10690 gagcgattttgcaccccatcttttgccaattgtgttttgttcaaaatcatcattaaaagatgggaaagatggaaaaagatggggtgcaaaatcg 10783  T

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Target: scaffold0376 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 7494 - 7552
Alignment:
Q  157 gcgattttgcaccccatcttttgccagttgtgttttgttcaaaatcatcattaaaagag 215  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  7494 gcgattttgcaccccatcgtttgccaattgtgttttgttcaaaatcatcattaaaagag 7552  T

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Target: scaffold0376; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 7651 - 7597
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctc 145  Q
    ||||||||||||||| |||| ||||||||||||||||||||| |||| | ||||||    
T  7651 cttaattgcactttttcccc-tatcttttgctaattgtgcgattttgtaccccctc 7597  T

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Target: scaffold0376; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 7457 - 7504
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||| |||| ||||||||||||||| ||||| ||||||    
T  7457 cttaattgcactttttcccc-tatcttttgctaattatgcgattttgca 7504  T

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Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 10014 - 10065
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcc 141  Q
    ||||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  10014 cttaattgcacttttgccccctatcttttgccaattgtacgattttgcatcc 10065  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 227989 - 228063
Alignment:
Q  15 cctgtgcgaattttgcagttttcgtccttttttcacgcattcttccgtcttgaaatgccttggaacttgaaatga 89  Q
    |||| |||||||  ||| |||||| || |||||||| | ||||||||||||| |||| |||||||||||||||||    
T  227989 cctgcgcgaattcagcaattttcgaccctttttcacccgttcttccgtcttgcaatgtcttggaacttgaaatga 228063  T

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Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 6154 - 6195
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcga 131  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  6154 cttaattgcacttttcacctctatcttttgctaattgtgcga 6195  T

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Target: scaffold0328; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 6847 - 6759
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatcccctcnnnnnnnnngagcgattttgcaccccatctttt 178  Q
    |||||||||| ||||| |||||||||||||| |||||||||| |||||| ||| |          ||||||||||||||||||||||||    
T  6847 cttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 6759  T

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Target: scaffold0460 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 332 - 384
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgcatccc 142  Q
    ||||||||||||||||||||||||  ||||  |||||||||| ||||||||||    
T  332 cttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatccc 384  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 38747 - 38699
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||| ||||||||  ||||| |||||||||| ||||||    
T  38747 cttaattgcactttttccccctatagtttgccaattgtgcgattttgca 38699  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 72968 - 73016
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    |||||||||| ||||||||  ||||||||||||||||||| | ||||||    
T  72968 cttaattgcatttttcccctttatcttttgctaattgtgcaattttgca 73016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 185326 - 185278
Alignment:
Q  90 cttaattgcacttttcccccctatcttttgctaattgtgcgactttgca 138  Q
    ||||||||||||||||| ||||||  ||||| |||||||||| ||||||    
T  185326 cttaattgcacttttcctccctatagtttgccaattgtgcgattttgca 185278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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