View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16757_low_11 (Length: 554)

Name: NF16757_low_11
Description: NF16757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16757_low_11
NF16757_low_11
[»] chr5 (21 HSPs)
chr5 (217-396)||(38010611-38010790)
chr5 (217-396)||(29989957-29990136)
chr5 (217-396)||(13478042-13478221)
chr5 (221-398)||(13015380-13015557)
chr5 (217-398)||(13086748-13086929)
chr5 (217-396)||(13421007-13421186)
chr5 (243-390)||(10292894-10293039)
chr5 (222-396)||(11607532-11607705)
chr5 (231-396)||(33858536-33858700)
chr5 (222-395)||(19357261-19357432)
chr5 (221-397)||(1826258-1826433)
chr5 (266-349)||(37881185-37881268)
chr5 (238-396)||(33271630-33271787)
chr5 (222-340)||(39570097-39570214)
chr5 (1-133)||(16727813-16727945)
chr5 (352-394)||(42331069-42331111)
chr5 (1-134)||(38921455-38921588)
chr5 (277-340)||(42148201-42148263)
chr5 (222-328)||(9827788-9827894)
chr5 (1-135)||(16306741-16306875)
chr5 (363-396)||(4408372-4408405)
[»] chr3 (22 HSPs)
chr3 (217-396)||(47186170-47186349)
chr3 (211-396)||(42664662-42664847)
chr3 (216-391)||(31187072-31187247)
chr3 (218-397)||(34029287-34029466)
chr3 (1-135)||(36164504-36164638)
chr3 (222-396)||(44380254-44380427)
chr3 (1-134)||(36163383-36163516)
chr3 (226-394)||(33509684-33509851)
chr3 (223-335)||(50934501-50934613)
chr3 (221-344)||(47426349-47426471)
chr3 (235-397)||(37742738-37742899)
chr3 (274-398)||(6022998-6023129)
chr3 (231-392)||(35094555-35094717)
chr3 (1-134)||(9099560-9099693)
chr3 (10-134)||(20997633-20997757)
chr3 (91-134)||(18939872-18939915)
chr3 (270-340)||(17466321-17466390)
chr3 (90-136)||(37465005-37465051)
chr3 (93-134)||(18912548-18912589)
chr3 (90-134)||(19801786-19801830)
chr3 (216-275)||(21963073-21963132)
chr3 (327-375)||(25859019-25859067)
[»] chr1 (23 HSPs)
chr1 (217-394)||(8809639-8809816)
chr1 (219-396)||(35998249-35998426)
chr1 (221-394)||(29119324-29119496)
chr1 (222-392)||(32676136-32676305)
chr1 (1-134)||(26529508-26529641)
chr1 (234-397)||(35534418-35534577)
chr1 (222-396)||(2569037-2569209)
chr1 (7-135)||(36573961-36574089)
chr1 (88-135)||(36575552-36575599)
chr1 (294-397)||(46435462-46435564)
chr1 (73-135)||(26530501-26530563)
chr1 (222-315)||(25161309-25161402)
chr1 (243-371)||(8462149-8462276)
chr1 (88-134)||(26531105-26531151)
chr1 (73-135)||(36574955-36575017)
chr1 (274-359)||(16679744-16679829)
chr1 (258-314)||(3688917-3688973)
chr1 (1-137)||(35063550-35063686)
chr1 (91-134)||(46150743-46150786)
chr1 (274-315)||(8555481-8555522)
chr1 (332-377)||(17431709-17431754)
chr1 (218-283)||(18056134-18056199)
chr1 (90-134)||(49919718-49919762)
[»] chr4 (23 HSPs)
chr4 (217-396)||(52012773-52012952)
chr4 (221-396)||(9799360-9799535)
chr4 (221-396)||(12473703-12473877)
chr4 (221-396)||(12528112-12528286)
chr4 (222-380)||(21260794-21260951)
chr4 (216-365)||(47943152-47943302)
chr4 (307-397)||(46720200-46720291)
chr4 (223-348)||(33249420-33249544)
chr4 (222-396)||(22343337-22343510)
chr4 (222-390)||(35869575-35869742)
chr4 (245-315)||(46719953-46720023)
chr4 (7-137)||(52189183-52189313)
chr4 (223-394)||(52910050-52910219)
chr4 (1-135)||(30829926-30830060)
chr4 (223-319)||(49999662-49999758)
chr4 (270-396)||(51811962-51812087)
chr4 (91-134)||(41774644-41774687)
chr4 (91-134)||(41780271-41780314)
chr4 (1-135)||(52190297-52190431)
chr4 (222-299)||(55590482-55590559)
chr4 (288-346)||(33174581-33174636)
chr4 (1-42)||(31409402-31409443)
chr4 (235-308)||(34829168-34829241)
[»] chr6 (18 HSPs)
chr6 (217-398)||(34245562-34245743)
chr6 (1-135)||(18192933-18193067)
chr6 (1-134)||(11020316-11020449)
chr6 (17-133)||(11020178-11020294)
chr6 (223-389)||(11113557-11113718)
chr6 (223-398)||(1211840-1212014)
chr6 (5-134)||(18191746-18191875)
chr6 (7-135)||(30757352-30757482)
chr6 (1-137)||(30758800-30758936)
chr6 (221-396)||(5403874-5404048)
chr6 (11-135)||(31857098-31857222)
chr6 (88-135)||(9448781-9448828)
chr6 (90-135)||(226120-226165)
chr6 (354-394)||(17330515-17330555)
chr6 (30-134)||(9447607-9447711)
chr6 (273-396)||(32644836-32644956)
chr6 (1-134)||(31855651-31855784)
chr6 (321-377)||(10126546-10126602)
[»] chr8 (17 HSPs)
chr8 (1-131)||(32564510-32564640)
chr8 (217-370)||(1514798-1514951)
chr8 (221-399)||(24337825-24338002)
chr8 (1-134)||(32565562-32565695)
chr8 (222-390)||(41179567-41179734)
chr8 (231-396)||(18168394-18168559)
chr8 (231-396)||(18631951-18632116)
chr8 (272-348)||(4708353-4708428)
chr8 (223-375)||(32825854-32826005)
chr8 (91-134)||(5005708-5005751)
chr8 (91-134)||(5014842-5014885)
chr8 (278-396)||(11254026-11254143)
chr8 (88-134)||(12887740-12887786)
chr8 (53-134)||(12888224-12888305)
chr8 (90-134)||(17863466-17863510)
chr8 (2-133)||(3872215-3872346)
chr8 (1-137)||(3870765-3870901)
[»] chr7 (17 HSPs)
chr7 (397-538)||(7164039-7164180)
chr7 (222-396)||(35341536-35341709)
chr7 (221-396)||(48250153-48250329)
chr7 (140-216)||(7163971-7164047)
chr7 (222-396)||(48072389-48072560)
chr7 (11-134)||(38517689-38517812)
chr7 (286-396)||(32694568-32694677)
chr7 (90-134)||(45291970-45292014)
chr7 (90-133)||(40601839-40601882)
chr7 (88-134)||(38516620-38516666)
chr7 (1-134)||(41739622-41739755)
chr7 (90-134)||(45296095-45296139)
chr7 (272-315)||(31306951-31306994)
chr7 (90-136)||(40600709-40600755)
chr7 (90-132)||(42537718-42537760)
chr7 (1-70)||(5225556-5225625)
chr7 (269-325)||(40856478-40856534)
[»] chr2 (28 HSPs)
chr2 (243-381)||(10163503-10163641)
chr2 (222-395)||(34392080-34392252)
chr2 (291-395)||(3668008-3668112)
chr2 (1-131)||(4754965-4755094)
chr2 (270-398)||(23863799-23863926)
chr2 (1-135)||(4753527-4753661)
chr2 (278-396)||(41095784-41095901)
chr2 (222-396)||(37357915-37358092)
chr2 (7-137)||(31622039-31622169)
chr2 (222-318)||(21603959-21604055)
chr2 (225-324)||(7381695-7381794)
chr2 (11-134)||(40893244-40893367)
chr2 (272-397)||(4779635-4779759)
chr2 (7-136)||(36669089-36669218)
chr2 (283-396)||(4775695-4775808)
chr2 (91-137)||(35306127-35306173)
chr2 (89-134)||(31620525-31620570)
chr2 (231-339)||(14565908-14566015)
chr2 (91-134)||(35298556-35298599)
chr2 (73-135)||(31621112-31621174)
chr2 (90-140)||(40894888-40894938)
chr2 (273-401)||(25275615-25275741)
chr2 (366-396)||(9207278-9207308)
chr2 (282-324)||(34903962-34904004)
chr2 (327-394)||(19619350-19619418)
chr2 (216-284)||(37811085-37811153)
chr2 (321-373)||(43154124-43154176)
chr2 (321-373)||(43159344-43159396)
[»] scaffold0229 (1 HSPs)
scaffold0229 (223-396)||(13003-13176)
[»] scaffold0032 (1 HSPs)
scaffold0032 (222-396)||(34194-34365)
[»] scaffold0519 (1 HSPs)
scaffold0519 (278-396)||(11250-11367)
[»] scaffold0115 (2 HSPs)
scaffold0115 (80-134)||(6087-6141)
scaffold0115 (80-134)||(13827-13881)
[»] scaffold0263 (1 HSPs)
scaffold0263 (270-324)||(23168-23222)


Alignment Details
Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 217 - 396
Target Start/End: Complemental strand, 38010790 - 38010611
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38010790 ggacaccacttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgata 38010691  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38010690 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 38010611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 217 - 396
Target Start/End: Original strand, 29989957 - 29990136
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29989957 ggacaccacttgtgtaccattaaggtatcaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgata 29990056  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29990057 tatgttttttaaagtgtgtgccacatgtcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 29990136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 217 - 396
Target Start/End: Complemental strand, 13478221 - 13478042
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||    
T  13478221 ggacaccacttgtgtaccattaaggaaccaatgttatataacattgaccaataagagtgtgccacataccattgttactttataaatattttatttgata 13478122  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  13478121 tatgttttttaaagtgtgtgccacatgtcacaccttaattagctaatgttatataacataatcgtacacatgtgctatcc 13478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 221 - 398
Target Start/End: Original strand, 13015380 - 13015557
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||     
T  13015380 accacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatattttatttgatatata 13015479  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccca 398  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  13015480 ttttttaaagtatgtgccacatgtcacatcttaattggctaatgttatataacataatgatacgcaagtggtatccca 13015557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 217 - 398
Target Start/End: Original strand, 13086748 - 13086929
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  13086748 ggacaccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttattttataaatattttatttgata 13086847  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccca 398  Q
    | | ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||  |||||| |||||||    
T  13086848 tgtattttttaaagtgtgtgccacatgtcacaccttaattagctaatgttatataacataatgataagcaagtggtatccca 13086929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 217 - 396
Target Start/End: Complemental strand, 13421186 - 13421007
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||| ||||||| ||||||||||| | ||||||||| |||||||||  |||||||||||  || ||| ||||||||||||||||||||||||||| |||    
T  13421186 ggacatcacttgtgtaccattaaggtatcaatgttatataacattgatcaataagagtgtatcaaatatcaatgttactttataaatgctttatttaata 13421087  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13421086 tatgttttttaaagtgtatgccacatgacacaccttacttgactaatgttatataacataatggtacacaagtgctatcc 13421007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 243 - 390
Target Start/End: Original strand, 10292894 - 10293039
Alignment:
Q  243 accaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacat 342  Q
    ||||||||||| |||||||| | ||||||| |||||||| ||| ||||||| ||| ||| || |||||||||||| |  ||||||||| ||||||||| |    
T  10292894 accaatgttatataacattggccaataagaatgtgccacgtactaatgttattttgtaagtgttttatttgatattt--tttttaaagggtgtgccacgt 10292991  T
Q  343 ggcacaccttaattggctaatgttatataacataatggtacacaagtg 390  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10292992 ggcacaccttaattggccaatgttatataacattatggtacacaagtg 10293039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 396
Target Start/End: Complemental strand, 11607705 - 11607532
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||||||||||||||| ||||||| ||| || ||||||| ||| | |||||||||| ||||||| |||||||||||||| |||||||||||||  |    
T  11607705 ccacttgtataccattaaggtaccaatggtatataccattgaccaattatagtgtgccacctaccaatattactttataaatgttttatttgatata-ct 11607607  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||| |||||||||  | ||||   |||||||  |||| |||||| ||| ||||||||||||||||||||    
T  11607606 tttttaaagggtgtgccacgggccacattctaattggacaatggtatatatcattatggtacacaagtgctatcc 11607532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 231 - 396
Target Start/End: Complemental strand, 33858700 - 33858536
Alignment:
Q  231 taccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaag 330  Q
    ||||||||||| ||||||  ||| || ||||||| ||| | |||||||||| |||||||||||||||||||||| |||||||||||||  ||||||||||    
T  33858700 taccattaaggtaccaatagtatatatcattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgatata-cttttttaaag 33858602  T
Q  331 tgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
     ||||||||| || ||||   |||||||  |||| |||||| ||| ||||||||||||||||||||    
T  33858601 ggtgtgccacgtgacacattctaattgggcaatggtatataccattatggtacacaagtgctatcc 33858536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 395
Target Start/End: Complemental strand, 19357432 - 19357261
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| |||||||| || ||||||| ||| || ||||| | ||| |||||||||||| ||||||| ||||||||||||||||||||||||||||  |    
T  19357432 ccacttgtgtaccattagggtaccaatggtatataccattggccaattagagtgtgccacctaccaatattactttataaatgctttatttgatata--t 19357335  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatc 395  Q
    |||||||||  ||| |||| || ||||   |||||||  |||| |||||| ||| |||||||||||||||||||    
T  19357334 tttttaaaggatgtcccacgtgacacattctaattggacaatgatatataccattatggtacacaagtgctatc 19357261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 221 - 397
Target Start/End: Original strand, 1826258 - 1826433
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||||||||| | ||||||| ||| || |||||   ||| |||||||| ||| ||||||| ||||||| || ||||||||||||||||||     
T  1826258 accacttgtgtaccattaaagtaccaatggtatataccattggtcaattagagtgtgtcacctaccaatattactttgtagatgctttatttgatatat- 1826356  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccc 397  Q
    ||||||||||| ||||||||||||||||  |||||||   |||| |||||| ||| ||| |||||||||| ||||||    
T  1826357 ttttttaaagtatgtgccacatggcacattttaattgaacaatgatatatatcattatgatacacaagtgatatccc 1826433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 37881185 - 37881268
Alignment:
Q  266 aataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacac 349  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||| ||||    
T  37881185 aataagagtgtgccacataccaatgttactttataaatattttatttgatatatgtttttcaaaatgtgtgccacatggtacac 37881268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 396
Target Start/End: Original strand, 33271630 - 33271787
Alignment:
Q  238 aagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgc 337  Q
    |||| ||||||| ||| || ||||| | ||| |||||||| ||  || ||||||||||| |||||||||||||||||||||| ||||||||||  || ||    
T  33271630 aaggtaccaatgatatatatcattggccaattagagtgtgtcatctatcaatgttacttgataaatgctttatttgatatat-ttttttaaaggatgcgc 33271728  T
Q  338 cacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||| |||||||   |||||||  |||  |||||| ||| |||||||| |||||||||||    
T  33271729 cacgtggcacattctaattgggcaatagtatataccattatggtacataagtgctatcc 33271787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 340
Target Start/End: Complemental strand, 39570214 - 39570097
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| || |||||| | | ||||| ||| || ||||| | ||| |||||||| ||| |||||||||||||||||||||| |||||||||||||  |    
T  39570214 ccacttgtgtatcattaaagtatcaatggtatataccattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgatata-ct 39570116  T
Q  322 tttttaaagtgtgtgccac 340  Q
    ||||||||| |||||||||    
T  39570115 tttttaaagggtgtgccac 39570097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 16727945 - 16727813
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||| |||||||| |||||||||  | ||||||||||||||  ||||||||| |||||||| |   || | |||||  ||| ||  | |||||||||||    
T  16727945 taacatcaagttaatgttttggatgcatttgactaacggaacagacattgaggaagtttttagttcgttttcttgattcaggaacgtggctgatagcgag 16727846  T
Q  101 ggacactttcagggacccaaatgagggtttact 133  Q
    | |||||||||| ||||||||||||||||||||    
T  16727845 gtacactttcagcgacccaaatgagggtttact 16727813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 394
Target Start/End: Complemental strand, 42331111 - 42331069
Alignment:
Q  352 taattggctaatgttatataacataatggtacacaagtgctat 394  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42331111 taattggctaatgttatataacataatggtacacaagtgctat 42331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 38921588 - 38921455
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||||||||||||  | |||||||||| ||| | ||||| ||||||||||  |   ||   |||||| |||||   | ||||||| |||    
T  38921588 taacaccaagttaacgttttggatgcatttgactaacgaaacaatcattgggggagtttttggttcatttcattgatctagggatgtgcctgatagtgag 38921489  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
      ||||||||||||||||||||||||||||||||    
T  38921488 caacactttcagggacccaaatgagggtttactc 38921455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 340
Target Start/End: Original strand, 42148201 - 42148263
Alignment:
Q  277 gccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccac 340  Q
    ||||| |||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||    
T  42148201 gccacctaccaatgttactttataaatgttttatttgatatat-ttttttaaagggtgtaccac 42148263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 328
Target Start/End: Original strand, 9827788 - 9827894
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| || | ||    ||| ||||||| |||| ||||||| |||||||||||||  |||||||||||||| |    
T  9827788 ccacttgtgtaccattaaggtaccaatggtatatacctttagtcaattagagtgtaccacctaccaatattactttataaatattttatttgatatatct 9827887  T
Q  322 tttttaa 328  Q
    |||||||    
T  9827888 tttttaa 9827894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16306741 - 16306875
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    |||| ||||||||||||||| |||  | |||||||||  |||  ||||| ||| ||||||| ||   |||  |||||| ||| |||| ||||||||||||    
T  16306741 taactccaagttaacgttttagatgcatttgactaacataacatacattaaggaagtttttgattcattaaattgatccaggaactgatctgatagcgag 16306840  T
Q  101 ggacactttcagggacccaaatgagggtttactct 135  Q
    ||||  |||||  ||| ||||||||||||| ||||    
T  16306841 ggactttttcaatgactcaaatgagggttttctct 16306875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 4408405 - 4408372
Alignment:
Q  363 tgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||||||||||| |||||||||||||||    
T  4408405 tgttatataacataatggcacacaagtgctatcc 4408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 1e-82; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 217 - 396
Target Start/End: Original strand, 47186170 - 47186349
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47186170 ggacaccacttgtgtaccattaaggtaccaatgttatataacattggccaataagagtgtgccacataccaatgttactttataaatactttatttgata 47186269  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47186270 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 47186349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 211 - 396
Target Start/End: Original strand, 42664662 - 42664847
Alignment:
Q  211 atttgtggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttat 310  Q
    |||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||||    
T  42664662 atttctggacaccacttgtgtaccattaaggtaccaaagttatataacattgaccaataagagtgtgccacataccaatgttattttataaatgttttat 42664761  T
Q  311 ttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42664762 ttgatatatgttttttaaagtgtgtgccacatgtcacaccttaattagctaatgttatataacataatggtacacaagtgctatcc 42664847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 216 - 391
Target Start/End: Complemental strand, 31187247 - 31187072
Alignment:
Q  216 tggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgat 315  Q
    |||||||||||| | ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31187247 tggacaccacttatgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacataccaatgttactttataaatgttttatttgat 31187148  T
Q  316 atatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgc 391  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31187147 atatattttttaaagtgtgtgccacatgtcacaccttaattggctaatgttatataacataatggtacacaagtgc 31187072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 218 - 397
Target Start/End: Complemental strand, 34029466 - 34029287
Alignment:
Q  218 gacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatat 317  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  34029466 gacaccacttgtttaccattaaggtaccaatgttatataacattgatcaataagagtgtgccacatactaatgttactttataaatgttttatttgatat 34029367  T
Q  318 atgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccc 397  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34029366 atgttttttaaagtgtgtgtcacatatcacaccttaattggctaatgttatataacataatggtacacaagtgctatccc 34029287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36164504 - 36164638
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  36164504 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagagagtttttaataatttctgttgatcgagggactggtctgatagcgag 36164603  T
Q  101 ggacactttcagggacccaaatgagggtttactct 135  Q
    |||||||||||||||||||||||||||||||||||    
T  36164604 ggacactttcagggacccaaatgagggtttactct 36164638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 222 - 396
Target Start/End: Original strand, 44380254 - 44380427
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| ||  |||||| ||| | |||||| ||| || |||| ||||||||||||||||||||||||||||  |    
T  44380254 ccacttgtgtaccattaaggtaccaatggtatatactattgaccaattatagtgtgtcacctatcaatattactttataaatgctttatttgatata-ct 44380352  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||| ||||||||| || ||||   |||||||  |||| |||||| ||| |||||||||||||| |||||    
T  44380353 tttttaaagggtgtgccacgtgacacattctaattggacaatggtatataccattatggtacacaagtgttatcc 44380427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 36163516 - 36163383
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||||||||||||  | |||||||||  |||  |||||| |||||||||| ||   |||  ||||| |||||| |||||||||||||||    
T  36163516 taacaccaagttaacgttttggatgcatttgactaacataacgtacattgggggagtttttgattcattaaattgattgagggattggtctgatagcgag 36163417  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||||| |||||||| |||||||||    
T  36163416 ggacactttcagggatccaaatgaaggtttactc 36163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 226 - 394
Target Start/End: Original strand, 33509684 - 33509851
Alignment:
Q  226 ttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttt 325  Q
    |||| ||||||||||| || |||  ||| || ||||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||||| ||| |||||    
T  33509684 ttgtgtaccattaaggtactaatagtatatatcattgaccaattagagtgtgccacctaccaatattactttatagatgctttatttgatgtat-ttttt 33509782  T
Q  326 taaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctat 394  Q
    |||||  ||||||||||||||||   ||||| |  |||| |||||| ||| || |||||||||||||||    
T  33509783 taaaggatgtgccacatggcacattctaattagacaatgatatataccattattgtacacaagtgctat 33509851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 50934501 - 50934613
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| ||||||||||| ||||||| ||| || ||||| | ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||    
T  50934501 cacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacttaccaatgttactttataaatgcattatttgatatatttt 50934600  T
Q  323 ttttaaagtgtgt 335  Q
     ||||||| ||||    
T  50934601 atttaaagggtgt 50934613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 344
Target Start/End: Original strand, 47426349 - 47426471
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||||||||||| ||||||  ||| || ||||| | ||| |||||||| ||| || ||||||||||||||| ||||||||||||||||||     
T  47426349 accacttgtgtaccattaaggtaccaatagtatataccattggccaattagagtgtgtcacctatcaatgttactttatagatgctttatttgatatat- 47426447  T
Q  321 ttttttaaagtgtgtgccacatgg 344  Q
    |||||||||| |||||||||||||    
T  47426448 ttttttaaagggtgtgccacatgg 47426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 235 - 397
Target Start/End: Original strand, 37742738 - 37742899
Alignment:
Q  235 attaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtg 334  Q
    ||||||| ||||||| ||| || |||||   ||| ||||| |||||| |||||||||||| |||  ||||||||||||||||||| |||||||||| |||    
T  37742738 attaaggtaccaatggtatatatcattggtcaattagagtatgccacctaccaatgttacattaccaatgctttatttgatatat-ttttttaaagagtg 37742836  T
Q  335 tgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccc 397  Q
    |||||| |||||||   |||||||  |||| |||||| ||| ||| |||||||||||||||||    
T  37742837 tgccacgtggcacattataattgggcaatggtatataccattatgttacacaagtgctatccc 37742899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 398
Target Start/End: Original strand, 6022998 - 6023129
Alignment:
Q  274 tgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgc-------cacatggcacaccttaattggctaatgtt 366  Q
    |||||||||||| ||||||| ||| ||| | ||||||||||||||| |||||||||| ||||||       ||| |||||||||||||||||| ||| ||    
T  6022998 tgtgccacatactaatgttattttgtaagtactttatttgatatatattttttaaagggtgtgccacgtggcacgtggcacaccttaattggccaatatt 6023097  T
Q  367 atataacataatggtacacaagtgctatccca 398  Q
    |||||| || ||||||||||| || |||||||    
T  6023098 atataatattatggtacacaaatgatatccca 6023129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 392
Target Start/End: Original strand, 35094555 - 35094717
Alignment:
Q  231 taccattaagggaccaatgttatgtaacattgactaataa--gagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaa 328  Q
    ||||||||| | |||| || ||| || ||||||||||| |  |||| |||||| |||||||||||||||||||||  |||||||||||||| ||||||||    
T  35094555 taccattaaagtaccagtggtatataccattgactaattatagagtatgccacctaccaatgttactttataaatattttatttgatatat-ttttttaa 35094653  T
Q  329 agtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgct 392  Q
    ||  |||| ||| || ||||   |||||||  |||| || ||| ||| ||||||||||| ||||    
T  35094654 aggatgtgtcacgtgacacattctaattggacaatgatacataccattatggtacacaaatgct 35094717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 9099693 - 9099560
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    |||||| |||||||||||||||| | | |||||||||||||| ||||||||  ||||||||  |   ||   |||||  |||||   |  ||||||||||    
T  9099693 taacactaagttaacgttttggacttatttgactaacggaaccaacattgaaagagtttttggttcgtttcattgattcagggatgtgcttgatagcgag 9099594  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
    | ||||||| ||||||||||||||||||||||||    
T  9099593 gtacactttaagggacccaaatgagggtttactc 9099560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 20997757 - 20997633
Alignment:
Q  10 gttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacacttt 109  Q
    |||||||||||||| | | |||||||||| ||| |||||||| |||||||||  |   || | ||||||  ||||   |  ||||||||||| ||| |||    
T  20997757 gttaacgttttggacttatttgactaacgaaaccaacattgaaggagtttttggtttgttttattgatcctgggatgtgcttgatagcgaggtacatttt 20997658  T
Q  110 cagggacccaaatgagggtttactc 134  Q
    |||||||||||||||||||||||||    
T  20997657 cagggacccaaatgagggtttactc 20997633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 18939872 - 18939915
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||| | ||||||||||||||||||||||||||||||||    
T  18939872 tgatagcgaagtacactttcagggacccaaatgagggtttactc 18939915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 17466321 - 17466390
Alignment:
Q  270 agagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccac 340  Q
    |||||||| ||| || ||||||||||||||||||| |||| ||||||||| |||||||||| || ||||||    
T  17466321 agagtgtgtcacctatcaatgttactttataaatgatttagttgatatat-ttttttaaagggtatgccac 17466390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 37465005 - 37465051
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactcta 136  Q
    |||||||||||  |||||||||||||||||||| |||||||||||||    
T  37465005 ctgatagcgagcaacactttcagggacccaaattagggtttactcta 37465051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 18912589 - 18912548
Alignment:
Q  93 atagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  18912589 atagtgaggtacactttcagggacccaaatgagggtttactc 18912548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 19801830 - 19801786
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||||||||| |||||||||||||||  |||||||||||||||    
T  19801830 ctgatagcgaggtacactttcagggaccggaatgagggtttactc 19801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 21963132 - 21963073
Alignment:
Q  216 tggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtg 275  Q
    |||||| ||||| | ||||||||||| | ||||||||| |||||||||| ||||||||||    
T  21963132 tggacatcacttatgtaccattaaggtatcaatgttatataacattgaccaataagagtg 21963073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 25859019 - 25859067
Alignment:
Q  327 aaagtgtgtgccacatggcacaccttaattggctaatgttatataacat 375  Q
    |||| |||||||||||| |||||  |||||||| |||||||||||||||    
T  25859019 aaagggtgtgccacatgacacactctaattggccaatgttatataacat 25859067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 5e-79; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 217 - 394
Target Start/End: Complemental strand, 8809816 - 8809639
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  8809816 ggacaccacttgtgtaccattaaggtaccaatgttatataacattgaccaataagagtgtgccacgtaccaatgttactttataaatgttttatttgata 8809717  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctat 394  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8809716 tatgttttttaaagtgtgtgccacatgtcacaccttaattggctaatgttatataacataatggtacacaagtgctat 8809639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 219 - 396
Target Start/End: Original strand, 35998249 - 35998426
Alignment:
Q  219 acaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatata 318  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||| || ||||||| |||||    
T  35998249 acaccacttgtataccattaaggtaccaatgttatataacattgattaataagagtgtgccacatatcaatgttattttataagtgttttattttatata 35998348  T
Q  319 tgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  35998349 tgttttttaaagtgtgtgccacatggcacatcttaattggctaatgttatataacataatggtacacaggtgctatcc 35998426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 221 - 394
Target Start/End: Complemental strand, 29119496 - 29119324
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||||||||||| ||||||| ||| || ||||| | ||| |||||||||||| || || |||||||||||| ||||||||||||||||||     
T  29119496 accacttgtgtaccattaaggtaccaatggtatataccattggccaattagagtgtgccacctatcattgttactttatagatgctttatttgatatat- 29119398  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctat 394  Q
    |||||||||| |||||||||||||||||   |||||||  |||  |||||| | | ||||||||||| ||||||    
T  29119397 ttttttaaagggtgtgccacatggcacattctaattgggcaattgtatatacccttatggtacacaaatgctat 29119324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 392
Target Start/End: Original strand, 32676136 - 32676305
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| || ||||| | ||| ||| ||  |||| ||||||||||||||||||||||||||||||||||||| |    
T  32676136 ccacttgtgtaccattaaggtaccaatggtatataccattggccaattagaatgcaccacctaccaatgttactttataaatgctttatttgatatat-t 32676234  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgct 392  Q
    |||||||||  ||||||||||||||||   |||||||  |||| |||||| ||| || |||||||| ||||    
T  32676235 tttttaaagcatgtgccacatggcacaatctaattggacaatggtatataccattatagtacacaaatgct 32676305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 26529641 - 26529508
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||| ||||||||||||||||||  | ||||||||| |||| ||||||||||||||||||| |   || | |||||  ||||||  |||||||||||||    
T  26529641 taacatcaagttaacgttttggatgcatttgactaacagaacaaacattgagggagtttttagttcgttttcttgattcagggacgtgtctgatagcgag 26529542  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
    | ||||||||||||||||||||||||||||||||    
T  26529541 gtacactttcagggacccaaatgagggtttactc 26529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 234 - 397
Target Start/End: Original strand, 35534418 - 35534577
Alignment:
Q  234 cattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgt 333  Q
    |||||||  ||||||||||| ||||||||   | | |||||||||||||||| ||||| | ||||||| || ||||||| ||||    ||||||||| ||    
T  35534418 cattaagataccaatgttatataacattggacactgagagtgtgccacatactaatgtcaatttataagtgttttatttaatat----tttttaaagggt 35534513  T
Q  334 gtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccc 397  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||||| |||||||    
T  35534514 gtgccacatgacacaccttaattggccaatattatataacattatggttcacaagttctatccc 35534577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 396
Target Start/End: Original strand, 2569037 - 2569209
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| || ||||  | ||| |||||||||||| |||||||||||| |||  ||||||||||||||||||  |    
T  2569037 ccacttgtgtaccattaaggtaccaatggtatatatcatttgccaattagagtgtgccacctaccaatgttacattaccaatgctttatttgatata--t 2569134  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||| ||||||||  |||||||   ||||| |  |||  |||||| ||| ||| ||||||||||||||||    
T  2569135 tttttaaagggtgtgccatgtggcacattctaattaggcaatagtatatatcattatgttacacaagtgctatcc 2569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 36574089 - 36573961
Alignment:
Q  7 caagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggac-tggtctgatagcgagggaca 105  Q
    ||||||||||||||||||  | ||||||||||||||  |||||||||||||||||| |   || | |||||  |||||| |||| ||||||||||| |||    
T  36574089 caagttaacgttttggatgcatttgactaacggaacagacattgagggagtttttagttcgttttcttgattcagggacgtggt-tgatagcgaggtaca 36573991  T
Q  106 ctttcagggacccaaatgagggtttactct 135  Q
    |||||||||||| ||||||| |||||||||    
T  36573990 ctttcagggacctaaatgagtgtttactct 36573961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 36575552 - 36575599
Alignment:
Q  88 gtctgatagcgagggacactttcagggacccaaatgagggtttactct 135  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  36575552 gtctgatagcgaggtacactttcagggactcaaatgagggtttactct 36575599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 397
Target Start/End: Complemental strand, 46435564 - 46435462
Alignment:
Q  294 ctttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgcta 393  Q
    ||||||| |||||||||||||||||| ||||| |||| ||||| |||||| ||||   |||||||  |||| |||||| ||| ||||||||||||| |||    
T  46435564 ctttatagatgctttatttgatatatattttt-aaagggtgtgtcacatgacacattctaattgggcaatggtatataccattatggtacacaagtccta 46435466  T
Q  394 tccc 397  Q
    ||||    
T  46435465 tccc 46435462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 26530563 - 26530501
Alignment:
Q  73 ttgatcgagggactggtctgatagcgagggacactttcagggacccaaatgagggtttactct 135  Q
    |||||| ||||||  || ||||||||||| |||||||||||||||||||||| ||||||||||    
T  26530563 ttgatccagggacatgtttgatagcgaggtacactttcagggacccaaatgaaggtttactct 26530501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 315
Target Start/End: Original strand, 25161309 - 25161402
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgat 315  Q
    |||||||| ||||||||| |   ||||| ||| || ||||||| ||| | |||||||||| || ||||||||||||||||||| ||||||||||    
T  25161309 ccacttgtgtaccattaaagtctcaatggtatataccattgaccaattacagtgtgccacctaacaatgttactttataaatgttttatttgat 25161402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 371
Target Start/End: Original strand, 8462149 - 8462276
Alignment:
Q  243 accaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacat 342  Q
    ||||||| ||| || ||||||  ||| | |||||||||| ||||||||||| |||||||||| ||||||| |||||  |||||||||| | ||||||| |    
T  8462149 accaatggtatatatcattgatcaattatagtgtgccacctaccaatgttattttataaatgttttatttaatata-cttttttaaagggcgtgccacgt 8462247  T
Q  343 ggcacaccttaattggctaatgttatata 371  Q
    | ||||  ||||||||  |||| ||||||    
T  8462248 gacacattttaattggacaatggtatata 8462276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 26531105 - 26531151
Alignment:
Q  88 gtctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  26531105 gtctaatagcgaggtacactttcagggaccaaaatgagggtttactc 26531151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 36575017 - 36574955
Alignment:
Q  73 ttgatcgagggactggtctgatagcgagggacactttcagggacccaaatgagggtttactct 135  Q
    |||||| ||||||  || ||||||||||| ||||||||||||||||||||||  |||||||||    
T  36575017 ttgatccagggacatgtttgatagcgaggtacactttcagggacccaaatgaaagtttactct 36574955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 16679744 - 16679829
Alignment:
Q  274 tgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggc 359  Q
    ||||||| |||| ||| ||  ||||||| ||||||||||||||||| |||||||||| ||||| ||| || |||| | ||||||||    
T  16679744 tgtgccatatacaaatattcttttataagtgctttatttgatatatattttttaaagggtgtgtcacgtgacacatcctaattggc 16679829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 3688973 - 3688917
Alignment:
Q  258 cattgactaataagagtgtgccacataccaatgttactttataaatgctttatttga 314  Q
    ||||||| ||| ||||||| | || |||||||||||||||||||||| |||||||||    
T  3688973 cattgaccaattagagtgtacaacctaccaatgttactttataaatgttttatttga 3688917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 35063550 - 35063686
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||||||||||||  | |||||||||| ||| |  |||| ||||||||||  |   ||   |||||| || ||   | ||||||| |||    
T  35063550 taacaccaagttaacgttttggatgcatttgactaacgaaacaataattgggggagtttttggttcgtttcattgatctagagatgtgcctgatagtgag 35063649  T
Q  101 ggacactttcagggacccaaatgagggtttactctaa 137  Q
      |||||||||| ||||||||||||||||||||||||    
T  35063650 caacactttcagagacccaaatgagggtttactctaa 35063686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 46150786 - 46150743
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||||||||||||| || ||| |||||||||||||    
T  46150786 tgatagcgagggacactttcaggaactcaagtgagggtttactc 46150743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 8555481 - 8555522
Alignment:
Q  274 tgtgccacataccaatgttactttataaatgctttatttgat 315  Q
    |||| ||||||||||||||| |||||||||| ||||||||||    
T  8555481 tgtgtcacataccaatgttattttataaatgttttatttgat 8555522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 17431709 - 17431754
Alignment:
Q  332 gtgtgccacatggcacaccttaattggctaatgttatataacataa 377  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||    
T  17431709 gtgtgccacatggcacaccctgattggacaatgttatataacataa 17431754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 283
Target Start/End: Complemental strand, 18056199 - 18056134
Alignment:
Q  218 gacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacat 283  Q
    |||||||||||| |||||||||   ||||||||||| ||| |||||| ||| | ||||||||||||    
T  18056199 gacaccacttgtgtaccattaaactaccaatgttatataatattgaccaatgaaagtgtgccacat 18056134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 49919718 - 49919762
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||||||| | ||||||||| ||||||||||||| ||||||||    
T  49919718 ctgatagcgatgcacactttcaaggacccaaatgagagtttactc 49919762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 8e-78; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 217 - 396
Target Start/End: Original strand, 52012773 - 52012952
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  52012773 ggacaccacttgtgtaccattaaggtaccaatgttatataacattgaccaataaaagtgtgccacataccaatgttactttataaatgttttatttgata 52012872  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52012873 tatgttttttaaagtgtgtgccacatgtcacaccttaattagctaatgttatataacataatggtacacaagtgctatcc 52012952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 9799535 - 9799360
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9799535 accacttgtataccattaaggtaccaatgttatataacattgaccaacaagaatgtgccacataccaatgttactttataaatgttttatttaatatatg 9799436  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9799435 ttttttaaagtgtgtgtcacatgtcacaccttaattagctaatgttatataacataatggtacacaagtgctatcc 9799360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 12473703 - 12473877
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||||||||||||||| ||||||| ||| || ||||| | ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  12473703 accacttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgatatat- 12473801  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||| ||||| |||||| ||||   ||||||   |||| |||||| ||| ||||||||||||||||||||    
T  12473802 ttttttaaagggtgtggcacatgacacattctaattgagcaatggtatataccattatggtacacaagtgctatcc 12473877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 12528112 - 12528286
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||||||||||||||| ||||||| ||| || ||||| | ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  12528112 accacttgtataccattaaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatgttactttatagatgctttatttgatatat- 12528210  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||| ||||| |||||| ||||   ||||||   |||| |||||| ||| ||||||||||||||||||||    
T  12528211 ttttttaaagggtgtggcacatgacacattctaattgagcaatggtatataccattatggtacacaagtgctatcc 12528286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 222 - 380
Target Start/End: Original strand, 21260794 - 21260951
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||| ||||||||||||| ||||||| ||| || ||||| | ||| |||||||| ||| |||||||||||||||||||||| |||||||||||||| |    
T  21260794 ccacttatataccattaaggtaccaatgatatatatcattggccaattagagtgtgtcacctaccaatgttactttataaatgttttatttgatatat-t 21260892  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatgg 380  Q
    ||||||||| |||||||||||||||||   ||||||| |||||||||||| ||| ||||    
T  21260893 tttttaaagggtgtgccacatggcacattctaattgggtaatgttatataccattatgg 21260951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 47943152 - 47943302
Alignment:
Q  216 tggacaccacttgtataccattaagggaccaatgttatgtaacatt-gactaataagagtgtgccacataccaatgttactttataaatgctttatttga 314  Q
    |||||||||||||| |||||||||   ||||||||||| ||| ||| ||| ||||| | |||||||||||||||| ||| |||||||||  |||||||||    
T  47943152 tggacaccacttgtgtaccattaaaataccaatgttatataatatttgaccaataaaaatgtgccacataccaatattattttataaatattttatttga 47943251  T
Q  315 tatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgt 365  Q
    ||||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  47943252 tatatgttttttaaaatgtgtgccacatgtcacaccttaattagctaatgt 47943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 307 - 397
Target Start/End: Original strand, 46720200 - 46720291
Alignment:
Q  307 ttatttgatatatgtttt-ttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccc 397  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||||||||    
T  46720200 ttatttgatatatgtttttttaaagtgtgtgccacatgacacaccttaattgactaatgttatataacataatggtaaagaagtgctatccc 46720291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 33249544 - 33249420
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| ||||||||||| || |||| ||| ||  |||| | ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||  |    
T  33249544 cacttgtgtaccattaaggtacaaatggtatatacaattggccaattagagtgtgtcacctaccaatgttactttataaatgctttatttgatatat-at 33249446  T
Q  323 ttttaaagtgtgtgccacatggcaca 348  Q
    |||||||| |||||||||||||||||    
T  33249445 ttttaaagggtgtgccacatggcaca 33249420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 222 - 396
Target Start/End: Original strand, 22343337 - 22343510
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| | ||||| ||| || ||||||| ||| |||||||| ||  || |||||||||||||||||||||||||||||||||| |    
T  22343337 ccacttgtgtaccattaaggtatcaatggtatatatcattgaccaattagagtgtgtcatctatcaatgttactttataaatgctttatttgatatat-t 22343435  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
     ||||||||  ||||||||||| ||||   ||||||   |||| |||||| ||| |||||||||| ||| |||||    
T  22343436 attttaaaggatgtgccacatgacacattctaattgaacaatgatatataccattatggtacacaggtgatatcc 22343510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 35869742 - 35869575
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| || ||||||| ||| | | |||||||| ||||||||||||| |||||||| |||||||||||||  |    
T  35869742 ccacttgtgtaccattaaggtaccaatggtatataccattgaccaattataatgtgccacctaccaatgttactatataaatgttttatttgatata-ct 35869644  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtg 390  Q
    ||||||||| ||||||||| || ||||   ||||||   |||| |||||| ||| |||||| |||||||    
T  35869643 tttttaaagggtgtgccacgtgacacattctaattgaacaatggtatataccattatggtagacaagtg 35869575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 315
Target Start/End: Original strand, 46719953 - 46720023
Alignment:
Q  245 caatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgat 315  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  46719953 caatgttatataacattgaccaataagagtgtgccacatacaaatgttactttataaatactttatttgat 46720023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 52189313 - 52189183
Alignment:
Q  7 caagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacac 106  Q
    ||||||||||||||||||  | ||||||||||||||  |||||||| |||||||| ||   ||   |||||| |||||   | ||||||||||||  |||    
T  52189313 caagttaacgttttggatgcatttgactaacggaacatacattgagcgagtttttgatttgtttaattgatccagggatgtggctgatagcgaggtgcac 52189214  T
Q  107 tttcagggacccaaatgagggtttactctaa 137  Q
    |||||||||||||||||||||||||||||||    
T  52189213 tttcagggacccaaatgagggtttactctaa 52189183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 223 - 394
Target Start/End: Complemental strand, 52910219 - 52910050
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| |||||| | || ||||||||||| || ||||| | ||| | |||||||||| ||||||| |||||||||||||||||||||||||| |        
T  52910219 cacttgtgtaccataatggtaccaatgttatataccattggccaattaaagtgtgccacctaccaatattactttataaatgctttatttgataaa--aa 52910122  T
Q  323 ttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctat 394  Q
      |||||  || |||||| ||||||||| ||||||   |||| |||||| |||||||||||| |||||||||    
T  52910121 aattaaaaggtatgccacgtggcacaccctaattgatcaatggtatataccataatggtacataagtgctat 52910050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 30830060 - 30829926
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||||||||||||  | |||||||||| ||| | ||||| ||||||||||  |   ||   |||||| |||||   | |||||||||||    
T  30830060 taacaccaagttaacgttttggatgcatttgactaacgaaacaatcattgggggagtttttggttcgtttcattgatctagggatgtgcctgatagcgag 30829961  T
Q  101 ggacactttcagggacccaaatgagggtttactct 135  Q
      |||||||||||||||||||||||||||||||||    
T  30829960 caacactttcagggacccaaatgagggtttactct 30829926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 49999758 - 49999662
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatat 319  Q
    ||||||| |||||| |||  || ||||||||||  |||||   ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  49999758 cacttgtgtaccatcaagatactaatgttatgtgtcattggtcaattagagtgtgtcacataccaatgttattttataaatgctttatttgatatat 49999662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 396
Target Start/End: Original strand, 51811962 - 51812087
Alignment:
Q  270 agagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttata 369  Q
    ||||| |||||| |||||||||||||||||||||  ||| |||||||||| |||||||||| ||||||||  || ||||   ||||||| ||||| ||||    
T  51811962 agagtatgccacctaccaatgttactttataaattttttttttgatatat-ttttttaaagggtgtgccatgtgacacattctaattggataatggtata 51812060  T
Q  370 taacataatggtacacaagtgctatcc 396  Q
    || ||| ||| || ||||||| |||||    
T  51812061 taccattatgatatacaagtgttatcc 51812087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 41774687 - 41774644
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  41774687 tgatagcgaggtacactttcagggacccaaatgagagtttactc 41774644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 41780271 - 41780314
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||| |||||||||| |||||||||||||||||||||    
T  41780271 tgatagcgaggtacactttcagagacccaaatgagggtttactc 41780314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 52190297 - 52190431
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgaggga-ctggtctgatagcga 99  Q
    ||||||||||||||||||||||||  | |||||||||  |||  |||||| ||||||||||  |   ||   |||||| | ||| |||| ||||||||||    
T  52190297 taacaccaagttaacgttttggatgcatttgactaacaaaacagacattgggggagtttttggttcgtttaattgatccatggatctgg-ctgatagcga 52190395  T
Q  100 gggacactttcagggacccaaatgagggtttactct 135  Q
    |   ||||||||||||||||||||||||||||||||    
T  52190396 gatgcactttcagggacccaaatgagggtttactct 52190431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 55590482 - 55590559
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttat 299  Q
    |||||||| ||||||||||| ||||||| ||| || ||||||  ||| | |||||| ||| |||||||||||||||||    
T  55590482 ccacttgtgtaccattaaggtaccaatggtatatatcattgatcaattatagtgtgtcacctaccaatgttactttat 55590559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 33174581 - 33174636
Alignment:
Q  288 atgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggca 346  Q
    ||||||||||||||||| |||||||||||||   ||||||||| ||||||||| |||||    
T  33174581 atgttactttataaatgttttatttgatata---tttttaaagggtgtgccacgtggca 33174636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31409443 - 31409402
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaac 42  Q
    ||||||||||||||||||||||||  | ||||||||||||||    
T  31409443 taacaccaagttaacgttttggatgcatttgactaacggaac 31409402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 34829241 - 34829168
Alignment:
Q  235 attaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgcttt 308  Q
    ||||||| ||||||| ||| || || || | ||| | |||||| ||| ||||||||||||||||||||||||||    
T  34829241 attaaggtaccaatgatatatatcaatggccaattaaagtgtgtcacctaccaatgttactttataaatgcttt 34829168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 2e-69; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 217 - 398
Target Start/End: Original strand, 34245562 - 34245743
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| |  |||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||    
T  34245562 ggacaccacttgtgtaccattaaggtattaatgttatataacattgaccaataaaagtgtgccacgtaccaatgttactttataaatactttatttgata 34245661  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccca 398  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  34245662 tatgttttttaaagtgtgtgccacatgacacaccttaattggctaatgttatataatataatggtacacaagtgttatccca 34245743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18192933 - 18193067
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18192933 taacaccaagttaacgttttggattaaattgactaacagaactaacattgagggagtttttaataatttatgttgatcgagggactggcctgatagcgag 18193032  T
Q  101 ggacactttcagggacccaaatgagggtttactct 135  Q
    |||||||||||||||||||||||||||||||||||    
T  18193033 ggacactttcagggacccaaatgagggtttactct 18193067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 11020316 - 11020449
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  11020316 taacaccaagttaacattttggattaaattgactaatggaactaacattgagggagtttttaataatttctgttgatcgagggattggtctgatagcgag 11020415  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||||||||||||||||||||||||    
T  11020416 ggacactttcagggacccaaatgagggtttactc 11020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 11020294 - 11020178
Alignment:
Q  17 ttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacactttcagggac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  11020294 ttttggattaaattgactaacggaactaacattgagggagtttttaataatttctgttgattgagggactggtctgatagtgagggacactttcagggac 11020195  T
Q  117 ccaaatgagggtttact 133  Q
    ||||||||| |||||||    
T  11020194 ccaaatgagagtttact 11020178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 223 - 389
Target Start/End: Original strand, 11113557 - 11113718
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||||||||     ||    
T  11113557 cacttgtgtaccattaaggtaccaatgctatataacattgactaataagagtgtgtcacatactaatgttactttgtaagtgctttatttgat-----tt 11113651  T
Q  323 ttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagt 389  Q
    ||||||||  || |||||||||||||||||||||| | ||||||||||| ||| |||||||| ||||    
T  11113652 ttttaaaggatgcgccacatggcacaccttaattgaccaatgttatataccattatggtacataagt 11113718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 223 - 398
Target Start/End: Complemental strand, 1212014 - 1211840
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| ||||||||||| ||||||| ||| || ||||| ||||| || ||||||||| |  ||||||||||||||  |||||||||||||||||| ||    
T  1212014 cacttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatatat-tt 1211916  T
Q  323 ttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatccca 398  Q
    |||||||| ||||||||| |||||||   |||| ||  |||| |||||| ||| |||||||||||||| |||||||    
T  1211915 ttttaaagggtgtgccacgtggcacattctaatggggcaatggtatataccattatggtacacaagtgatatccca 1211840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 18191875 - 18191746
Alignment:
Q  5 accaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggac 104  Q
    ||||||||||||||||||||  | |||||||||  |||  |||||| |||||||||| ||   |||  ||||| |||||||||||||||||||| |||||    
T  18191875 accaagttaacgttttggatgcatttgactaacataacatacattgggggagtttttgattcattaaattgattgagggactggtctgatagcgtgggac 18191776  T
Q  105 actttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||||||||||||||||||||    
T  18191775 actttcagggacccaaatgagggtttactc 18191746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 30757482 - 30757352
Alignment:
Q  7 caagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggac-tg-gtctgatagcgagggac 104  Q
    |||||||||||||  || ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | | || || || |||||||||| |||    
T  30757482 caagttaacgtttcagactaaattgacgaacggaactaacattgaaggagtttttaataatttatgttgatccaagaacgtgtgtgtgatagcgagagac 30757383  T
Q  105 actttcagggacccaaatgagggtttactct 135  Q
    |||||||| || | ||||||| |||||||||    
T  30757382 actttcagagatctaaatgagagtttactct 30757352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30758800 - 30758936
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaat--aatttatgttgatcgagggactggtctgatagcg 98  Q
    |||||||||||||| |||||||||  | |||||||||  |||  ||||||||||||||||| ||  |||||||  ||||| |  ||| ||| ||| ||||    
T  30758800 taacaccaagttaatgttttggatgcatttgactaacaaaacatacattgagggagtttttgattcaatttat--tgatcaaatgacgggtgtgacagcg 30758897  T
Q  99 agggacactttcagggacccaaatgagggtttactctaa 137  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  30758898 agggacactttcaaggacccaaatgagggtttactctaa 30758936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 5404048 - 5403874
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||||||||||| || |||| ||| ||  ||||   | | ||||| |||||| |||||||||||||||||| ||| ||||||||||||||     
T  5404048 accacttgtgtaccattaaggtactaatggtatatattattggtcagttagagtctgccacctaccaatgttactttatagatgttttatttgatatat- 5403950  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||| | ||  |||||| ||||   |||||||  |||| |||||| ||| ||||||||||||||||||||    
T  5403949 ttttttaaagggcgtatcacatgacacattctaattggacaatggtatataccattatggtacacaagtgctatcc 5403874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 31857098 - 31857222
Alignment:
Q  11 ttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacactttc 110  Q
    |||||||||  ||||||||| ||||||  || ||||||||| ||||||||||||| ||| | |||||  | || ||| ||||||||  || |||||||||    
T  31857098 ttaacgtttcagattaaattaactaacaaaattaacattgatggagtttttaatagtttctattgattcacggtctgatctgatagtaagtgacactttc 31857197  T
Q  111 agggacccaaatgagggtttactct 135  Q
    |||||| ||||||||| ||||||||    
T  31857198 agggactcaaatgaggatttactct 31857222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 9448781 - 9448828
Alignment:
Q  88 gtctgatagcgagggacactttcagggacccaaatgagggtttactct 135  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  9448781 gtctgatagcgaggtacactttcagggacccaaatgagggtttactct 9448828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 226165 - 226120
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactct 135  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||    
T  226165 ctgatagcgaggcacactttcaaggacccaaatgagggtttactct 226120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 394
Target Start/End: Complemental strand, 17330555 - 17330515
Alignment:
Q  354 attggctaatgttatataacataatggtacacaagtgctat 394  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  17330555 attggctaatattatataacataatggtacacaagtgctat 17330515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 9447711 - 9447607
Alignment:
Q  30 tgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacactttcagggacccaaatgagggtt 129  Q
    ||||||||| |  ||||| |||||||| |||| |||||||  ||||||  ||||||  |||||||| ||||| | ||||||||| || ||||| ||||||    
T  9447711 tgactaacgaagttaacaatgagggagcttttgataattttcgttgattcagggacgtgtctgataacgaggtatactttcaggaactcaaataagggtt 9447612  T
Q  130 tactc 134  Q
    |||||    
T  9447611 tactc 9447607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 396
Target Start/End: Complemental strand, 32644956 - 32644836
Alignment:
Q  273 gtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataa 372  Q
    ||||| ||| ||| |||||||||||| |||| ||||||||| ||||| |||||||||| ||||||||||||  |||   ||||||   |||| ||||||     
T  32644956 gtgtgtcacctacaaatgttacttta-aaatactttatttgttatat-ttttttaaagggtgtgccacatgatacaatctaattgaacaatggtatatac 32644859  T
Q  373 cataatggtacacaagtgctatcc 396  Q
    ||| || |||||||||||||||||    
T  32644858 cattat-gtacacaagtgctatcc 32644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 31855784 - 31855651
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||| |||| |||||||||  | |||||||||  |||  |||||  |||||||||| ||   |||  |||||  ||| |||||||||||||||||    
T  31855784 taacaccaaattaatgttttggatacatttgactaacataacatacattaggggagtttttgattcattaaattgattcaggaactggtctgatagcgag 31855685  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
     ||||||||||  ||  |||||||| ||||||||    
T  31855684 agacactttcaaagattcaaatgagagtttactc 31855651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 377
Target Start/End: Original strand, 10126546 - 10126602
Alignment:
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataa 377  Q
    ||||| |||| ||||||||| ||||||||| | |||||  |||||||||||||||||    
T  10126546 tttttaaaagggtgtgccacgtggcacacccttattggacaatgttatataacataa 10126602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 32564640 - 32564510
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32564640 taacaccaagttaacgttttggattaaattgactgatggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 32564541  T
Q  101 ggacactttcagggacccaaatgagggttta 131  Q
    ||||||||||| |||||||||||||||||||    
T  32564540 ggacactttcaaggacccaaatgagggttta 32564510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 217 - 370
Target Start/End: Original strand, 1514798 - 1514951
Alignment:
Q  217 ggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata 316  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  1514798 ggacaccacttgtgtaccattaaggtaccaatgttatataacattgatcaataagagtgtaccacataccaatgttactttataaatgttttatttgata 1514897  T
Q  317 tatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatat 370  Q
    ||| ||||||||| ||||| ||| ||| |||||||||||||| |||||||||||    
T  1514898 tatattttttaaaatgtgtaccatatgtcacaccttaattggttaatgttatat 1514951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 221 - 399
Target Start/End: Complemental strand, 24338002 - 24337825
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||| ||||||| | ||||| ||| || ||| |   ||| |||||||||||  |||||||||||||||||| ||||||||||||||||||     
T  24338002 accacttgtgtactattaaggtagcaatggtatataccatcggtcaattagagtgtgccatctaccaatgttactttatagatgctttatttgatatat- 24337904  T
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcccac 399  Q
     ||||||||| ||||||||||| |||||   |||||||  |||| |||||| ||| |||||||||||||||||||||||    
T  24337903 atttttaaagggtgtgccacatagcacattctaattggacaatggtatataccattatggtacacaagtgctatcccac 24337825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 32565562 - 32565695
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||| ||||||||||||||||||  | |||||||||  |||  |||||| |||||||||| ||   |||  ||||||||||||||||||||||||||||    
T  32565562 taacatcaagttaacgttttggatgcatttgactaacataacgtacattgggggagtttttgattcattaaattgatcgagggactggtctgatagcgag 32565661  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||||||| ||| ||||||||||||    
T  32565662 ggacactttcagggacctaaacgagggtttactc 32565695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 41179734 - 41179567
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| || ||||| | ||| | |||||| ||| |||| ||||||||||||||||| ||||||| |||||| |    
T  41179734 ccacttgtgtaccattaaggtaccaatgatatatatcattggccaattaaagtgtgtcacctaccgatgttactttataaatgttttatttaatatat-t 41179636  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtg 390  Q
    ||||||| |  ||||||||||||||||   |||||||  |||| |||||| ||| ||||||||||||||    
T  41179635 tttttaatggatgtgccacatggcacattctaattgggcaatggtatataccattatggtacacaagtg 41179567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 231 - 396
Target Start/End: Original strand, 18168394 - 18168559
Alignment:
Q  231 taccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaag 330  Q
    ||||||||||| ||||||| ||| || ||||||  ||| ||||||| |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  18168394 taccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatatattttttttaaag 18168493  T
Q  331 tgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
      |||||||| || ||||   ||||| | ||||  |||||| ||| ||||||||||  ||||||||    
T  18168494 gatgtgccacgtgacacaatctaattaggtaataatatataccattatggtacacagatgctatcc 18168559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 231 - 396
Target Start/End: Original strand, 18631951 - 18632116
Alignment:
Q  231 taccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaag 330  Q
    ||||||||||| ||||||| ||| || ||||||  ||| ||||||| |||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  18631951 taccattaaggtaccaatggtatatatcattgatcaattagagtgtcccacctaccaatcttactttataaatactttatttgatatattttttttaaag 18632050  T
Q  331 tgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
      |||||||| || ||||   ||||| | ||||  |||||| ||| ||||||||||  ||||||||    
T  18632051 gatgtgccacgtgacacaatctaattaggtaataatatataccattatggtacacagatgctatcc 18632116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 4708428 - 4708353
Alignment:
Q  272 agtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcaca 348  Q
    |||||| ||| |||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||||| |||||||    
T  4708428 agtgtgtcacctaccaatgttactttataaatgttttatttgatatat-atttttaaagggtgtgccacgtggcaca 4708353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 375
Target Start/End: Complemental strand, 32826005 - 32825854
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| ||||||||| | | ||||||| | || ||||| | ||| ||||| || |||||| |||||||| ||||||  || |||||||||||||| ||    
T  32826005 cacttgtgtaccattaaagtatcaatgttgtataccattggccaattagagtatgtcacatatcaatgttattttatatgtgttttatttgatatat-tt 32825907  T
Q  323 ttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacat 375  Q
    ||| ||||  |||| |||||| |||| |||||||||| |||  ||||||||||    
T  32825906 tttaaaaggttgtgtcacatgacacatcttaattggccaattatatataacat 32825854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 5005751 - 5005708
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  5005751 tgatagcgaggtacactttcagggacccaaatgagggtttactc 5005708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Original strand, 5014842 - 5014885
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  5014842 tgatagcgaggtacactttcagggacccaaatgagggtttactc 5014885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 278 - 396
Target Start/End: Complemental strand, 11254143 - 11254026
Alignment:
Q  278 ccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataa 377  Q
    |||| |||||||||||||||||||||| |||||||||||||   ||||||||| ||||||||| || ||||   ||| ||   |||| |||||| ||| |    
T  11254143 ccacctaccaatgttactttataaatgttttatttgatata-catttttaaagggtgtgccacgtgacacattctaactgagcaatggtatataccatta 11254045  T
Q  378 tggtacacaagtgctatcc 396  Q
    |||||||||| ||||||||    
T  11254044 tggtacacaaatgctatcc 11254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 12887740 - 12887786
Alignment:
Q  88 gtctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  12887740 gtctgatcgcgaggtacactttcagggacccaaatgagggtttactc 12887786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 12888224 - 12888305
Alignment:
Q  53 ggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||||||||||| || | ||||||  |||||  |||||||||||||| ||| |||||||||| ||||||||| |||||||    
T  12888224 ggagtttttaataacttttcttgatcttgggacgtgtctgatagcgaggtacaatttcagggactcaaatgaggatttactc 12888305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 17863510 - 17863466
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||  |||||||||||||||||||||||||||||||    
T  17863510 ctgatagcgaggtgcactttcagggacccaaatgagggtttactc 17863466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 3872215 - 3872346
Alignment:
Q  2 aacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagg 101  Q
    |||| ||| |||||||||||||  ||||||||||||||||  | ||||||| ||||||||  |   ||   |||||  ||||||  | ||||||||||||    
T  3872215 aacaacaacttaacgttttggacgaaattgactaacggaataaccattgagagagtttttggttcgtttaattgatacagggacgtggctgatagcgagg 3872314  T
Q  102 gacactttcagggacccaaatgagggtttact 133  Q
      |||||||||||||||||| |||||||||||    
T  3872315 tgcactttcagggacccaaacgagggtttact 3872346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3870901 - 3870765
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    |||||| || |||||||||||||  ||||||||||||||||| |  |||| |||||||||| ||    |   |||||| ||||||  | ||||||||||     
T  3870901 taacacgaacttaacgttttggacgaaattgactaacggaacaactattgggggagtttttgattcgcttaattgatctagggacgtggctgatagcgaa 3870802  T
Q  101 ggacactttcagggacccaaatgagggtttactctaa 137  Q
       || |||||||||||||| ||||||||||||||||    
T  3870801 atgcattttcagggacccaagtgagggtttactctaa 3870765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 397 - 538
Target Start/End: Original strand, 7164039 - 7164180
Alignment:
Q  397 cacatttgttccccacataatgttaaacaaaaaatttctttaaggnnnnnnnn-ttcatcttgatgaaattgaagaaacaagtgaccaattagcatgtct 495  Q
    |||||||||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||| |||||||||||||    
T  7164039 cacatttgtttcccacataatgttaaacaaaaaatttctttaaggaaaaaaaaattcatcttgatgaaattgaagaaacaagtgac-aattagcatgtct 7164137  T
Q  496 attccaccttcattaacaattcattattacatatgtttgattt 538  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  7164138 attccgccttcattaacaattcattattacatatgtttgattt 7164180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 222 - 396
Target Start/End: Original strand, 35341536 - 35341709
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| || ||||||| ||| | |||||||||| |||||||||||||||||||||| |||||||||||||  |    
T  35341536 ccacttgtgtaccattaaggtaccaatgatatataccattgaccaattatagtgtgccacctaccaatgttactttataaatgttttatttgatata-ct 35341634  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||| ||||||||| || ||||   |||||||  |||| |||||| ||| |||||| | ||||| |||||    
T  35341635 tttttaaagggtgtgccacgtgacacattctaattggacaatgatatatatcattatggtagataagtgttatcc 35341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 48250153 - 48250329
Alignment:
Q  221 accacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatg 320  Q
    ||||||||| ||||||||||| ||||||| ||| || |||||   ||| |||||||||||| |||||||||||||||||| |||||||||||||||| |     
T  48250153 accacttgtgtaccattaaggtaccaatgatatatatcattggtcaattagagtgtgccacctaccaatgttactttatagatgctttatttgatat-tt 48250251  T
Q  321 ttttttaaagtgtgtgccaca--tggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||||| || ||| |||  || ||||   |||||||  |||| |||||| ||| ||||||||||||||||||||    
T  48250252 ttttttaaagggtatgctacatgtgtcacattctaattggacaatggtatataccattatggtacacaagtgctatcc 48250329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 7163971 - 7164047
Alignment:
Q  140 aacaccgcatgataaatagtgagatcatagatagtcaacacatggttgtatattataggagacacgaacacatttgt 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  7163971 aacaccgtatgataaatagtgagatcatagatagtcaacacatagctgtatattattggagacacgaacacatttgt 7164047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 396
Target Start/End: Original strand, 48072389 - 48072560
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||| ||||||| ||||||  |||  | ||||||  ||| ||||||||||||||  |||||||| |||||||||  |||||||||| ||| |    
T  48072389 ccacttgtgtactattaaggtaccaatagtat--accattgatcaattagagtgtgccacatttcaatgttattttataaatattttatttgatgtat-t 48072485  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||| ||||||||| |||||||   |||||||  |||| |||||| ||| ||||||||||||||||||||    
T  48072486 tttttaaagggtgtgccacgtggcacattctaattgggcaatggtatataccattatggtacacaagtgctatcc 48072560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 38517689 - 38517812
Alignment:
Q  11 ttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacactttc 110  Q
    ||||||||||||| |||  |||||||||||  ||||| |||||||| |||| |||||||  ||||||| ||||||  |||||||||||| | | |||||     
T  38517689 ttaacgttttggactaatatgactaacggagttaacaatgagggagcttttgataattttcgttgatccagggacgtgtctgatagcgatgtatactttt 38517788  T
Q  111 agggacccaaatgagggtttactc 134  Q
    |||||| |||||||||||||||||    
T  38517789 agggactcaaatgagggtttactc 38517812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 396
Target Start/End: Complemental strand, 32694677 - 32694568
Alignment:
Q  286 caatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacac 385  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| || ||||   ||||| |  |||| |||||| ||| || ||||||    
T  32694677 caatgttactttataaattctttatttgatatat-ttttttaaagggtgtgccacgtgacacattctaattaggcaatggtatataccattatagtacac 32694579  T
Q  386 aagtgctatcc 396  Q
    |||||||||||    
T  32694578 aagtgctatcc 32694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 45291970 - 45292014
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  45291970 ctgatagcgaggtacactttcagggacccaaatgagggtttactc 45292014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 40601839 - 40601882
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttact 133  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  40601839 ctgatagcgaggcacactttcagggacccaaatgagggtttact 40601882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 38516666 - 38516620
Alignment:
Q  88 gtctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||    
T  38516666 gtctgatagcgatgtacactttcagggacccaaatgagggtttactc 38516620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 41739755 - 41739622
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    ||||||||||||||||||||||||  | |||||||||| ||| | ||||| ||||||||||  |   ||   |||||| |||||   | |||||||||||    
T  41739755 taacaccaagttaacgttttggatgcatttgactaacgaaacaatcattgggggagtttttggttcgtttcattgatctagggatgtgcctgatagcgag 41739656  T
Q  101 ggacactttcagggacccaaatgagggtttactc 134  Q
      | ||||||||| ||||||||||||||||||||    
T  41739655 caatactttcaggaacccaaatgagggtttactc 41739622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 45296095 - 45296139
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  45296095 ctgatagcgaggtacacttttagggacccaaatgagggtttactc 45296139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 315
Target Start/End: Complemental strand, 31306994 - 31306951
Alignment:
Q  272 agtgtgccacataccaatgttactttataaatgctttatttgat 315  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  31306994 agtgtgctacctaccaatgttactttataaatgctttatttgat 31306951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 40600755 - 40600709
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactcta 136  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  40600755 ctgatagagaggcacattttcagggacccaaatgagggtttactcta 40600709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 42537760 - 42537718
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttac 132  Q
    |||||||||||  |||||||||||||||||| |||||||||||    
T  42537760 ctgatagcgagcaacactttcagggacccaactgagggtttac 42537718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5225556 - 5225625
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataattta 70  Q
    |||||| ||||||| ||||  || ||| || |||||| |||||| |||||||||||| ||||||||||||    
T  5225556 taacactaagttaatgtttcagactaatttaactaacagaactagcattgagggagtgtttaataattta 5225625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 325
Target Start/End: Original strand, 40856478 - 40856534
Alignment:
Q  269 aagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttt 325  Q
    ||||||||| ||| ||||||||||| |||||| ||| |||||||||| ||| |||||    
T  40856478 aagagtgtgtcacctaccaatgttattttatagatgttttatttgatgtattttttt 40856534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 243 - 381
Target Start/End: Original strand, 10163503 - 10163641
Alignment:
Q  243 accaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacat 342  Q
    ||||||||||| |||||||||| ||||| | ||||||||||||  || |||||||||||||  |||||||||||||||||||||||||| ||||| ||||    
T  10163503 accaatgttatataacattgaccaataaaaatgtgccacatactgatattactttataaataatttatttgatatatgttttttaaagtatgtgctacat 10163602  T
Q  343 ggcacaccttaattggctaatgttatataacataatggt 381  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  10163603 ggcataccttaattgactaatgttatataacataatggt 10163641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 222 - 395
Target Start/End: Complemental strand, 34392252 - 34392080
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||| ||| ||||||| ||| || ||||| | ||| |||||||||||| ||||||| ||||||||||||||||||||||||||||| |    
T  34392252 ccacttgtgtaccattgaggtaccaatggtatataccattggccaattagagtgtgccacctaccaatcttactttataaatgctttatttgatatat-t 34392154  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatc 395  Q
    ||||||||| |||||||||||||||||   |||||||  |||| |||||| ||| |||||||||||||||||||    
T  34392153 tttttaaagggtgtgccacatggcacaatctaattggacaatggtatataccattatggtacacaagtgctatc 34392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 291 - 395
Target Start/End: Complemental strand, 3668112 - 3668008
Alignment:
Q  291 ttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtg 390  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  3668112 ttactttataagtgctttattttatatatgttttttaaagtgagtgccacatggcacatcttaattggctaatattatataatataatggtacacaagtg 3668013  T
Q  391 ctatc 395  Q
    |||||    
T  3668012 ctatc 3668008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4754965 - 4755094
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgag 100  Q
    |||||||||||||||||||  || ||| |||||||||| ||||||||||||| ||  ||||||||||||||||||||| ||||||  |||||||||||||    
T  4754965 taacaccaagttaacgtttcagactaatttgactaacg-aactaacattgagagatgttttaataatttatgttgatctagggacgtgtctgatagcgag 4755063  T
Q  101 ggacactttcagggacccaaatgagggttta 131  Q
    |||||||||||| ||||||||||||||||||    
T  4755064 ggacactttcagagacccaaatgagggttta 4755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 270 - 398
Target Start/End: Complemental strand, 23863926 - 23863799
Alignment:
Q  270 agagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttata 369  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||   |||||||  |||| ||||    
T  23863926 agagtgtgccacctaccaatgttactttataaatgctttatttgatatat-atttttaaagggtgtgccacatggcacattctaattggacaatgatata 23863828  T
Q  370 taacataatggtacacaagtgctatccca 398  Q
    || ||| ||||||||| ||||||||||||    
T  23863827 tatcattatggtacactagtgctatccca 23863799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4753661 - 4753527
Alignment:
Q  1 taacaccaagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaata-atttatgttgatcgagggactggtctgatagcga 99  Q
    ||||||||||||||||||||||||  | |||||||||  |||  ||||||||||||||||| ||  |||||  |||||| ||||||||||||||||||||    
T  4753661 taacaccaagttaacgttttggatgcatttgactaacaaaacatacattgagggagtttttgattcatttaa-ttgatccagggactggtctgatagcga 4753563  T
Q  100 gggacactttcagggacccaaatgagggtttactct 135  Q
    | |||||||||||||||||||| |||||||||||||    
T  4753562 gagacactttcagggacccaaacgagggtttactct 4753527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 278 - 396
Target Start/End: Complemental strand, 41095901 - 41095784
Alignment:
Q  278 ccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataa 377  Q
    |||| |||||||||||||||||||||||||||||||||| || |||||||||  || |||||||||||||||| ||| |||| |||| |||||| ||| |    
T  41095901 ccacctaccaatgttactttataaatgctttatttgatagat-ttttttaaaaggtatgccacatggcacaccctaaatggccaatggtatataccatta 41095803  T
Q  378 tggtacacaagtgctatcc 396  Q
    ||||||  |||||||||||    
T  41095802 tggtacctaagtgctatcc 41095784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 396
Target Start/End: Complemental strand, 37358092 - 37357915
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgata---ta 318  Q
    |||||||| || |||||||| ||||||| ||| || ||||||||||| |||||||| ||| || ||||||||||||||||||||||||||| |||   |     
T  37358092 ccacttgtgtatcattaaggtaccaatgatatataccattgactaattagagtgtgtcacctatcaatgttactttataaatgctttatttaatattttt 37357993  T
Q  319 tgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    | ||||||||| | |||||||| || ||||   |||||||  |||| ||||||  || ||| ||||||||||||||||    
T  37357992 ttttttttaaactatgtgccacgtgacacattctaattggacaatggtatatactattatgatacacaagtgctatcc 37357915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 31622039 - 31622169
Alignment:
Q  7 caagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggac-tggtctgatagcgagggaca 105  Q
    ||||||||||||||||||  | ||||| |||||||| ||||||||||||||||||| |   || | |||||  |||||| |||| ||||| ||||| |||    
T  31622039 caagttaacgttttggatgcatttgacaaacggaacaaacattgagggagtttttagtttgttttcttgattcagggacgtggt-tgataacgaggtaca 31622137  T
Q  106 ctttcagggacccaaatgagggtttactctaa 137  Q
    ||||||||||||||||| ||||||||||||||    
T  31622138 ctttcagggacccaaataagggtttactctaa 31622169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 21603959 - 21604055
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatata 318  Q
    |||||||| ||||||||||| ||||||| ||| || ||||||| ||| | |||||  ||| |||||||||||||||||||||| |||||||||||||    
T  21603959 ccacttgtgtaccattaaggtaccaatggtatataccattgaccaattatagtgtatcacctaccaatgttactttataaatgttttatttgatata 21604055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 225 - 324
Target Start/End: Original strand, 7381695 - 7381794
Alignment:
Q  225 cttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtttt 324  Q
    ||||| ||||||||||| ||||||| ||| ||  |||| | ||| |||||||||||  ||||||||||||||||||||| ||||||||||||||| ||||    
T  7381695 cttgtgtaccattaaggtaccaatggtatatactattggccaattagagtgtgccatctaccaatgttactttataaattctttatttgatatatttttt 7381794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 40893367 - 40893244
Alignment:
Q  11 ttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacactttc 110  Q
    ||||| |||||||||||| ||| ||| |||  |||| |||| |||||||||||||||||  ||||||  |||||   ||||||||||||| | |||||||    
T  40893367 ttaaccttttggattaaaatgattaatggagttaactttgaaggagtttttaataattttcgttgattcagggatgtgtctgatagcgagtgtcactttc 40893268  T
Q  111 agggacccaaatgagggtttactc 134  Q
    | ||||  ||||||||||||||||    
T  40893267 aaggacgaaaatgagggtttactc 40893244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 397
Target Start/End: Original strand, 4779635 - 4779759
Alignment:
Q  272 agtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatata 371  Q
    |||||||| | || |||||||||||||||||| ||||||||||||||| ||||||||||  |||| ||| || ||||   |||||||  |||| ||||||    
T  4779635 agtgtgccgcctaacaatgttactttataaatactttatttgatatat-ttttttaaaggatgtgtcacgtgacacattctaattggacaatggtatata 4779733  T
Q  372 acataatggtacacaagtgctatccc 397  Q
     ||| ||| |||||||||| ||||||    
T  4779734 ccattatgatacacaagtgttatccc 4779759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 36669089 - 36669218
Alignment:
Q  7 caagttaacgttttggattaaattgactaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagggacac 106  Q
    ||||||||||||||||||  | ||||||||| ||||  |||||||||||||||||| |   || | |||||  ||||||  | ||||||||||||  |||    
T  36669089 caagttaacgttttggatgcatttgactaacagaacagacattgagggagtttttagtttgttttcttgattcagggacgtggctgatagcgaggtgcac 36669188  T
Q  107 tttcagggacccaaatgagggtttactcta 136  Q
    ||||| ||| |||||| |||||||||||||    
T  36669189 tttcatggatccaaattagggtttactcta 36669218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 283 - 396
Target Start/End: Original strand, 4775695 - 4775808
Alignment:
Q  283 taccaatgttactttataaat-gctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggt 381  Q
    ||||||| ||||||||| ||| | ||||||| |||||| ||||||||||  ||||||||||||||||  ||||||||  |||| |||||| ||| |||||    
T  4775695 taccaatcttactttattaattgttttatttaatatat-ttttttaaaggatgtgccacatggcacaatttaattggacaatggtatataccattatggt 4775793  T
Q  382 acacaagtgctatcc 396  Q
    |||||| || |||||    
T  4775794 acacaaatgttatcc 4775808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 35306127 - 35306173
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactctaa 137  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  35306127 tgatagcgaggtacactttcagggacctaaatgagggtttactctaa 35306173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 31620570 - 31620525
Alignment:
Q  89 tctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||    
T  31620570 tctgatagcgaggtacactttcagggactcaaatgagggtttactc 31620525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 14566015 - 14565908
Alignment:
Q  231 taccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaag 330  Q
    ||||| ||||| ||||||||||| || ||||||  ||  ||||||||| |||||||||| ||| ||||||| | ||| |||||||||| |||||||||||    
T  14566015 taccactaaggtaccaatgttatatatcattgatcaagtagagtgtgctacataccaatattattttataagtacttcatttgatata-gttttttaaag 14565917  T
Q  331 tgtgtgcca 339  Q
      |||||||    
T  14565916 gatgtgcca 14565908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 35298599 - 35298556
Alignment:
Q  91 tgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  35298599 tgatagcgaggtacactttcaggaacccaaatgagggtttactc 35298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 31621112 - 31621174
Alignment:
Q  73 ttgatcgagggactggtctgatagcgagggacactttcagggacccaaatgagggtttactct 135  Q
    |||||| ||||||  || ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  31621112 ttgatccagggacatgtttgatagcgaggtacacttttagggacccaaatgaaggtttactct 31621174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 40894888 - 40894938
Alignment:
Q  90 ctgatagcgagggacactttcagggacccaaatgagggtttactctaagaa 140  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||| |||||    
T  40894888 ctgatagcgaggtacacttttagggatccaaatgagggtttactcaaagaa 40894938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 401
Target Start/End: Complemental strand, 25275741 - 25275615
Alignment:
Q  273 gtgtgccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataa 372  Q
    ||||||||| || |||||||||||| ||||| ||||||||||||||  ||||||||||  |||||||| ||  |||   |||||||  |||| ||||||     
T  25275741 gtgtgccacctatcaatgttacttt-taaatactttatttgatatac-ttttttaaaggatgtgccacgtgatacattctaattggacaatgatatatac 25275644  T
Q  373 cataatggtacacaagtgctatcccacat 401  Q
    ||| ||| |||| ||||||||||| ||||    
T  25275643 cattatgatacagaagtgctatccgacat 25275615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 9207278 - 9207308
Alignment:
Q  366 tatataacataatggtacacaagtgctatcc 396  Q
    |||||||||||||||||||||||||||||||    
T  9207278 tatataacataatggtacacaagtgctatcc 9207308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 324
Target Start/End: Original strand, 34903962 - 34904004
Alignment:
Q  282 ataccaatgttactttataaatgctttatttgatatatgtttt 324  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||    
T  34903962 atactaatgttattttataaatgctttatttgatatatttttt 34904004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 19619418 - 19619350
Alignment:
Q  327 aaagtgtgtgccacatggcacaccttaattggctaatgttatataacat-aatggtacacaagtgctat 394  Q
    |||| ||||||||| || || |||||| ||||| |||||||||||| || | |||||||||||||||||    
T  19619418 aaagggtgtgccacgtgacataccttatttggccaatgttatataatatcagtggtacacaagtgctat 19619350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 37811085 - 37811153
Alignment:
Q  216 tggacaccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacata 284  Q
    |||||||||||||| |||||||  |  ||||||||||| |||||||| | ||| | |||||||||||||    
T  37811085 tggacaccacttgtgtaccattgggataccaatgttatataacattggccaatgaaagtgtgccacata 37811153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 43154176 - 43154124
Alignment:
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataac 373  Q
    |||||||||| ||||||||| ||||||||| | |||||  |||||||||||||    
T  43154176 ttttttaaagggtgtgccacgtggcacaccctgattggacaatgttatataac 43154124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 43159344 - 43159396
Alignment:
Q  321 ttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataac 373  Q
    |||||||||| ||||||||| ||||||||| | |||||  |||||||||||||    
T  43159344 ttttttaaagggtgtgccacgtggcacaccctgattggacaatgttatataac 43159396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 223 - 396
Target Start/End: Complemental strand, 13176 - 13003
Alignment:
Q  223 cacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgtt 322  Q
    ||||||| ||||||||||| ||||||| ||| || ||||| ||||| || ||||||||| |  ||||||||||||||  |||||||||||||||||| ||    
T  13176 cacttgtgtaccattaaggtaccaatggtatataccattggctaattagtgtgtgccacctttcaatgttactttatcgatgctttatttgatatat-tt 13078  T
Q  323 ttttaaagtg-tgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    |||||||| | |||||||| |||||||   |||| ||  |||| |||||| ||| ||||||||||||||||||||    
T  13077 ttttaaagggttgtgccacgtggcacattctaatggggcaatggtatataccattatggtacacaagtgctatcc 13003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 396
Target Start/End: Original strand, 34194 - 34365
Alignment:
Q  222 ccacttgtataccattaagggaccaatgttatgtaacattgactaataagagtgtgccacataccaatgttactttataaatgctttatttgatatatgt 321  Q
    |||||||| ||||||||||| ||||||| ||| ||  |||| | ||| |||||||||||| ||||||| |||||||||||||  |||||||||||||  |    
T  34194 ccacttgtgtaccattaaggtaccaatggtatatattattggccaattagagtgtgccacttaccaatattactttataaatattttatttgatata--t 34291  T
Q  322 tttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataatggtacacaagtgctatcc 396  Q
    ||||||||| ||||| ||| || ||||   ||||||| ||||||||||| || | ||||||||||| ||||||||    
T  34292 tttttaaagggtgtgtcacgtgacacattctaattggataatgttatat-accttatggtacacaaatgctatcc 34365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 278 - 396
Target Start/End: Original strand, 11250 - 11367
Alignment:
Q  278 ccacataccaatgttactttataaatgctttatttgatatatgttttttaaagtgtgtgccacatggcacaccttaattggctaatgttatataacataa 377  Q
    |||| |||||||||||||||||||||| |||||||||||||   ||||||||| ||||||||| || ||||   ||| ||   |||| |||||| ||| |    
T  11250 ccacctaccaatgttactttataaatgttttatttgatata-catttttaaagggtgtgccacgtgacacattctaactgagcaatggtatataccatta 11348  T
Q  378 tggtacacaagtgctatcc 396  Q
    |||||||||| ||||||||    
T  11349 tggtacacaaatgctatcc 11367  T

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Target: scaffold0115 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 6087 - 6141
Alignment:
Q  80 agggactggtctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||| || |||||||||||| |||||||||||||| |||||||||||||||||    
T  6087 agggacggggctgatagcgaggtacactttcagggactcaaatgagggtttactc 6141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 13827 - 13881
Alignment:
Q  80 agggactggtctgatagcgagggacactttcagggacccaaatgagggtttactc 134  Q
    |||||| || |||||||||||| |||||||||||||| |||||||||||||||||    
T  13827 agggacggggctgatagcgaggtacactttcagggactcaaatgagggtttactc 13881  T

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Target: scaffold0263 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 23222 - 23168
Alignment:
Q  270 agagtgtgccacataccaatgttactttataaatgctttatttgatatatgtttt 324  Q
    |||||||||||| ||||||| |||||||||||||  |||||||||||||| ||||    
T  23222 agagtgtgccacctaccaattttactttataaatattttatttgatatatttttt 23168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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