View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16757_low_7 (Length: 641)

Name: NF16757_low_7
Description: NF16757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16757_low_7
NF16757_low_7
[»] chr1 (35 HSPs)
chr1 (305-627)||(3877485-3877803)
chr1 (20-245)||(3877270-3877487)
chr1 (20-169)||(35829195-35829345)
chr1 (28-190)||(43241162-43241325)
chr1 (252-417)||(32066805-32066967)
chr1 (28-190)||(49348175-49348338)
chr1 (28-190)||(51441545-51441708)
chr1 (243-441)||(32083255-32083453)
chr1 (99-185)||(32083531-32083617)
chr1 (252-441)||(35828903-35829092)
chr1 (57-197)||(37463636-37463777)
chr1 (94-190)||(51601463-51601559)
chr1 (247-402)||(28528159-28528314)
chr1 (57-190)||(8671288-8671421)
chr1 (28-169)||(34827888-34828029)
chr1 (252-366)||(40419264-40419378)
chr1 (316-441)||(51441274-51441399)
chr1 (120-175)||(13027297-13027352)
chr1 (57-151)||(40419049-40419143)
chr1 (78-200)||(46227075-46227198)
chr1 (316-441)||(7921574-7921699)
chr1 (325-441)||(19936177-19936294)
chr1 (357-441)||(51234302-51234386)
chr1 (344-403)||(12807635-12807694)
chr1 (315-441)||(1210391-1210517)
chr1 (104-190)||(7813911-7813996)
chr1 (316-441)||(27445545-27445670)
chr1 (242-294)||(7814067-7814119)
chr1 (28-123)||(16142675-16142771)
chr1 (261-366)||(16273417-16273519)
chr1 (243-441)||(8671494-8671692)
chr1 (315-441)||(43240891-43241017)
chr1 (315-441)||(51601704-51601830)
chr1 (247-353)||(52421008-52421114)
chr1 (117-197)||(38205425-38205505)
[»] chr8 (23 HSPs)
chr8 (28-175)||(15216068-15216216)
chr8 (28-190)||(36566022-36566185)
chr8 (28-190)||(42854794-42854957)
chr8 (28-175)||(36544490-36544638)
chr8 (57-190)||(12492623-12492757)
chr8 (252-398)||(38667142-38667286)
chr8 (57-200)||(41445074-41445219)
chr8 (242-405)||(41444849-41445013)
chr8 (252-441)||(36544735-36544924)
chr8 (325-441)||(4033004-4033120)
chr8 (255-402)||(25985128-25985273)
chr8 (252-417)||(33830767-33830929)
chr8 (326-441)||(42854514-42854629)
chr8 (108-197)||(30579002-30579092)
chr8 (315-441)||(36565751-36565877)
chr8 (58-134)||(3284861-3284938)
chr8 (371-425)||(18124878-18124932)
chr8 (312-366)||(18849700-18849754)
chr8 (252-372)||(28300687-28300803)
chr8 (116-184)||(11130727-11130796)
chr8 (315-404)||(12492389-12492478)
chr8 (241-297)||(13984202-13984258)
chr8 (108-176)||(38666986-38667054)
[»] chr3 (29 HSPs)
chr3 (24-190)||(51448490-51448657)
chr3 (76-200)||(29816891-29817016)
chr3 (28-175)||(52138166-52138314)
chr3 (250-441)||(48221365-48221556)
chr3 (250-441)||(25190960-25191151)
chr3 (97-173)||(9258294-9258370)
chr3 (241-402)||(44395002-44395163)
chr3 (246-377)||(19757645-19757776)
chr3 (252-364)||(43111606-43111715)
chr3 (94-200)||(50630092-50630198)
chr3 (316-417)||(27917219-27917320)
chr3 (19-167)||(48221110-48221259)
chr3 (252-340)||(1448224-1448312)
chr3 (261-401)||(32490274-32490414)
chr3 (137-200)||(19736614-19736677)
chr3 (137-200)||(19757432-19757495)
chr3 (109-175)||(26592236-26592302)
chr3 (315-441)||(38849740-38849866)
chr3 (315-441)||(47542221-47542347)
chr3 (243-441)||(51448219-51448417)
chr3 (243-340)||(30724411-30724508)
chr3 (252-340)||(1470708-1470796)
chr3 (241-404)||(15750810-15750973)
chr3 (244-295)||(19757559-19757610)
chr3 (327-418)||(26489975-26490066)
chr3 (28-190)||(38849432-38849595)
chr3 (115-200)||(805377-805462)
chr3 (137-190)||(25190827-25190880)
chr3 (240-365)||(26592022-26592147)
[»] chr7 (34 HSPs)
chr7 (28-190)||(11593291-11593454)
chr7 (28-185)||(46356637-46356795)
chr7 (28-190)||(32629946-32630109)
chr7 (57-190)||(33350587-33350721)
chr7 (57-190)||(39907160-39907294)
chr7 (57-190)||(49028648-49028782)
chr7 (59-190)||(36651363-36651495)
chr7 (67-200)||(43793803-43793938)
chr7 (96-190)||(36870070-36870164)
chr7 (28-168)||(38896949-38897090)
chr7 (243-441)||(38606580-38606777)
chr7 (29-176)||(24426284-24426432)
chr7 (67-176)||(38606415-38606525)
chr7 (67-165)||(20499486-20499585)
chr7 (243-395)||(32630181-32630333)
chr7 (94-183)||(24177983-24178072)
chr7 (57-165)||(48055623-48055732)
chr7 (325-425)||(24177721-24177821)
chr7 (254-334)||(24436514-24436594)
chr7 (116-175)||(21520229-21520288)
chr7 (252-399)||(43793592-43793739)
chr7 (243-441)||(37616490-37616688)
chr7 (315-441)||(46356361-46356487)
chr7 (315-441)||(11593606-11593732)
chr7 (116-190)||(23087896-23087970)
chr7 (243-441)||(33350316-33350514)
chr7 (315-441)||(36651640-36651766)
chr7 (325-366)||(18608275-18608316)
chr7 (325-366)||(18626562-18626603)
chr7 (325-366)||(18637236-18637277)
chr7 (325-366)||(18650671-18650712)
chr7 (137-190)||(31004672-31004725)
chr7 (315-404)||(49028913-49029002)
chr7 (116-198)||(17101259-17101338)
[»] chr2 (33 HSPs)
chr2 (28-190)||(2609866-2610029)
chr2 (57-190)||(24584387-24584521)
chr2 (28-175)||(452412-452560)
chr2 (28-190)||(38453399-38453562)
chr2 (57-190)||(8180162-8180296)
chr2 (57-190)||(45368406-45368540)
chr2 (243-441)||(11992616-11992814)
chr2 (315-441)||(45368134-45368259)
chr2 (57-169)||(876521-876634)
chr2 (58-151)||(16292081-16292175)
chr2 (243-441)||(24584116-24584314)
chr2 (315-441)||(38453130-38453256)
chr2 (108-189)||(13148741-13148822)
chr2 (243-440)||(41763560-41763757)
chr2 (252-416)||(7789074-7789238)
chr2 (242-438)||(37281680-37281878)
chr2 (243-441)||(2610102-2610300)
chr2 (96-190)||(12475202-12475296)
chr2 (68-175)||(14769676-14769785)
chr2 (285-365)||(12904584-12904664)
chr2 (315-441)||(4807238-4807364)
chr2 (109-197)||(7135445-7135533)
chr2 (254-310)||(14769884-14769940)
chr2 (104-155)||(13593172-13593223)
chr2 (252-441)||(8180363-8180552)
chr2 (325-441)||(452132-452248)
chr2 (281-365)||(23866267-23866351)
chr2 (113-148)||(33595091-33595126)
chr2 (315-441)||(13148959-13149085)
chr2 (120-178)||(34502106-34502164)
chr2 (138-200)||(36038669-36038731)
chr2 (111-175)||(7789347-7789411)
chr2 (252-340)||(13592959-13593047)
[»] chr4 (44 HSPs)
chr4 (30-190)||(39707803-39707963)
chr4 (58-190)||(1212088-1212221)
chr4 (242-395)||(10775975-10776128)
chr4 (28-176)||(23907097-23907246)
chr4 (28-176)||(435570-435719)
chr4 (20-190)||(1777796-1777967)
chr4 (104-200)||(17666796-17666892)
chr4 (108-195)||(42037327-42037414)
chr4 (315-441)||(27450683-27450809)
chr4 (57-190)||(48623308-48623442)
chr4 (57-130)||(53703977-53704051)
chr4 (255-366)||(33369356-33369464)
chr4 (252-441)||(41427422-41427610)
chr4 (57-176)||(27450968-27451088)
chr4 (243-441)||(31960324-31960522)
chr4 (241-426)||(20917554-20917739)
chr4 (247-404)||(39708035-39708192)
chr4 (266-407)||(47265748-47265889)
chr4 (315-441)||(435875-436001)
chr4 (343-441)||(3273096-3273194)
chr4 (55-200)||(10776190-10776336)
chr4 (241-339)||(25867163-25867261)
chr4 (315-441)||(33226855-33226981)
chr4 (315-441)||(48623037-48623163)
chr4 (328-441)||(1629090-1629203)
chr4 (76-176)||(3272815-3272916)
chr4 (125-176)||(16002350-16002401)
chr4 (311-402)||(39754920-39755011)
chr4 (315-442)||(56374936-56375063)
chr4 (315-441)||(1777525-1777651)
chr4 (104-190)||(17668104-17668190)
chr4 (315-441)||(23906811-23906937)
chr4 (118-200)||(35556092-35556173)
chr4 (104-150)||(55769198-55769244)
chr4 (95-200)||(15183461-15183566)
chr4 (252-417)||(17666572-17666732)
chr4 (104-176)||(21060188-21060260)
chr4 (96-154)||(20917413-20917471)
chr4 (136-190)||(53707241-53707295)
chr4 (104-150)||(55833454-55833500)
chr4 (136-190)||(56374737-56374791)
chr4 (312-376)||(25597933-25597997)
chr4 (242-294)||(55769034-55769086)
chr4 (242-294)||(55833290-55833342)
[»] chr6 (21 HSPs)
chr6 (28-190)||(6082738-6082901)
chr6 (28-175)||(9706113-9706261)
chr6 (28-190)||(30670226-30670389)
chr6 (51-167)||(2208206-2208323)
chr6 (60-190)||(5258931-5259063)
chr6 (28-150)||(3629568-3629691)
chr6 (242-441)||(5258660-5258859)
chr6 (243-437)||(10100371-10100565)
chr6 (96-176)||(5631224-5631304)
chr6 (58-190)||(20428418-20428551)
chr6 (98-200)||(9369171-9369274)
chr6 (96-168)||(2680853-2680926)
chr6 (256-444)||(7079728-7079909)
chr6 (325-441)||(9706432-9706548)
chr6 (256-441)||(20428146-20428331)
chr6 (243-441)||(5631391-5631590)
chr6 (111-190)||(33495629-33495708)
chr6 (55-174)||(27790521-27790641)
chr6 (266-377)||(3632613-3632724)
chr6 (253-295)||(2680706-2680748)
chr6 (344-444)||(8811840-8811940)
[»] chr5 (36 HSPs)
chr5 (28-190)||(2076255-2076418)
chr5 (28-190)||(1274603-1274766)
chr5 (28-185)||(1288375-1288533)
chr5 (57-190)||(3394078-3394212)
chr5 (28-190)||(20318329-20318492)
chr5 (243-441)||(3394285-3394482)
chr5 (55-176)||(27296-27417)
chr5 (58-185)||(12493148-12493276)
chr5 (28-190)||(24177862-24178025)
chr5 (94-187)||(3301254-3301347)
chr5 (94-190)||(10638703-10638799)
chr5 (243-441)||(3301423-3301621)
chr5 (107-425)||(43558340-43558670)
chr5 (243-441)||(20318565-20318763)
chr5 (260-377)||(25937662-25937780)
chr5 (104-190)||(28977638-28977724)
chr5 (253-398)||(6368478-6368623)
chr5 (315-441)||(12492897-12493023)
chr5 (28-174)||(40383794-40383941)
chr5 (120-174)||(14099757-14099811)
chr5 (57-150)||(31502868-31502962)
chr5 (255-309)||(35685437-35685491)
chr5 (67-176)||(37123946-37124056)
chr5 (252-441)||(1274848-1275037)
chr5 (325-402)||(27302496-27302573)
chr5 (268-403)||(16347950-16348085)
chr5 (104-175)||(35685270-35685340)
chr5 (315-441)||(2075984-2076110)
chr5 (315-441)||(10638943-10639069)
chr5 (120-169)||(3096625-3096674)
chr5 (308-397)||(21363013-21363102)
chr5 (104-200)||(7672588-7672684)
chr5 (126-166)||(16134841-16134881)
chr5 (325-405)||(17341747-17341827)
chr5 (252-340)||(23979815-23979903)
chr5 (325-441)||(24178180-24178296)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-190)||(30806-30969)
[»] scaffold0286 (1 HSPs)
scaffold0286 (51-167)||(305-422)
[»] scaffold0606 (2 HSPs)
scaffold0606 (281-402)||(9269-9390)
scaffold0606 (50-152)||(9028-9131)
[»] scaffold0024 (1 HSPs)
scaffold0024 (325-437)||(82377-82489)
[»] scaffold0045 (1 HSPs)
scaffold0045 (51-145)||(88760-88855)
[»] scaffold0570 (1 HSPs)
scaffold0570 (315-441)||(2780-2906)
[»] scaffold0113 (2 HSPs)
scaffold0113 (121-190)||(12373-12442)
scaffold0113 (325-404)||(12145-12224)
[»] scaffold0220 (2 HSPs)
scaffold0220 (104-164)||(25020-25080)
scaffold0220 (254-309)||(24863-24918)
[»] scaffold0896 (1 HSPs)
scaffold0896 (344-444)||(4286-4386)


Alignment Details
Target: chr1 (Bit Score: 266; Significance: 1e-148; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 305 - 627
Target Start/End: Original strand, 3877485 - 3877803
Alignment:
Q  305 ttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 404  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3877485 ttctgttttagaggtaaaaattggagattatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 3877584  T
Q  405 aatataattcatcaaattcaatatgggtggttgaaattaatgaatgagtttaatggaaatatggtttatgattaaacatggtaacataagccgaccccat 504  Q
    ||||||||||||||||||||||||||||| |||||||||||||    ||| ||  |||||||||||||||||||||||||||||||||||||||||||||    
T  3877585 aatataattcatcaaattcaatatgggtgcttgaaattaatga----gttgaaccgaaatatggtttatgattaaacatggtaacataagccgaccccat 3877680  T
Q  505 ttaatacgaaaatgtttgattcggtaactagtccatgaacggacaaatcggggttcaatctcatcaatcatttgccggacccatttaaagttaaaagaag 604  Q
    |||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3877681 ttaatacgaaaatgtttgattcggtatctagtccatgaaccgacatatcggggttcaatctcatcgatcatttgccggacccatttaaagttaaaagaag 3877780  T
Q  605 aacatgagaagagggagtataat 627  Q
    |||||||||||||||||||||||    
T  3877781 aacatgagaagagggagtataat 3877803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 3877270 - 3877487
Alignment:
Q  20 ttcaactggtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacctaagtccatatctttttaccttag 119  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3877270 ttcaactagtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaaccttagtccatatctttttaccttag 3877369  T
Q  120 ttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggagcattgaataggaggttgga 219  Q
    |||||||||||||||||||||||      ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  3877370 ttttggatgtacttatagaacac------gagctaggatcgagatgtatgttttttgaaaatgatgcagttctacttggagcattga--aggaggttgga 3877461  T
Q  220 gataaaccttaaaaacacacaacttc 245  Q
    ||||| | ||||||||||||||||||    
T  3877462 gataagctttaaaaacacacaacttc 3877487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 35829345 - 35829195
Alignment:
Q  20 ttcaactggtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacct-aagtccatatctttttacctta 118  Q
    ||||||| ||||||| || || |||| |||| || ||||||||||| |||||||| ||||||| |||||||||| || ||| |||||| ||| || ||||    
T  35829345 ttcaactagtgtgagtacacaagatggggtcgccgacgattttcccataacaataggattgcaccaaggatcaaacttaagcccatatatttctaactta 35829246  T
Q  119 gttttggatgtacttatagaacacatccaagagctagcatcgagatgtatg 169  Q
    |||||||||||||||| |||||||||||||||||||||| ||| |||||||    
T  35829245 gttttggatgtacttacagaacacatccaagagctagcaccgatatgtatg 35829195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 43241325 - 43241162
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    |||||||||||||||||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  43241325 gtgtgaggacgcacgatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 43241226  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  43241225 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 43241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 252 - 417
Target Start/End: Complemental strand, 32066967 - 32066805
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||  ||| || |||||  |||||||| ||||||||||||||||||||   |||| |||    
T  32066967 agtagaagcatgacatagtatatgtaatgtaattttagcaaaaggtgaagtagttctaccttagaggtgaaaattggagatcatatcat---acaagtta 32066871  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatc 417  Q
    |||| |||||||||  ||||| |||| || |||| ||  |||||||| |||||||| ||| |||||    
T  32066870 cacagtttaaatattttgggttcatagtacaaaatgacagagaaataaaagcaaatgtaaatcatc 32066805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 49348338 - 49348175
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| ||| || ||||||| ||||||||||| |||||||||||    
T  49348338 gtgtgaggacgcatgatgggactaccgaagattttcccataacaataggattgcaccaagggtcagccctaagtccttatctttttactttagttttgga 49348239  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  49348238 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgtagatgatgtagtc 49348175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 51441708 - 51441545
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||| | |||||||||||    
T  51441708 gtgtgaggacgcaagatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatcttttttctttagttttgga 51441609  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  51441608 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 51441545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 243 - 441
Target Start/End: Complemental strand, 32083453 - 32083255
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||| || ||||||||  ||| |   ||||  || ||||| ||| ||||||||||||||||      
T  32083453 ttccgcctgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcatac 32083354  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| || ||||||||||||||| |||||||||| || |||| || ||||||||||| |||||| ||| |||||  ||||||  ||||||||||||||    
T  32083353 cccaagttgcacaatttaaatatcttgggtccatagtacaaaatgacggagaaatagaggcaaatgtaaatcatcgtattcaagctgggtggttgaaat 32083255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 32083617 - 32083531
Alignment:
Q  99 gtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatg 185  Q
    |||| ||||||||||| ||||||||||||||||| | |||||||||||||||| ||||| ||||||||||| |||||| ||||||||    
T  32083617 gtccttatctttttactttagttttggatgtactgacagaacacatccaagagttagcaccgagatgtatgctttttgcaaatgatg 32083531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 252 - 441
Target Start/End: Complemental strand, 35829092 - 35828903
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||  | || |||||  || ||||| |||  | |||||||||||||  ||||| |||    
T  35829092 agtacaagcaagacaaagtatatgaaatgtaattttagcaaaagacatagtagttctaccttggaggtgaaagctagagatcatatcataccacaagtta 35828993  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | |   ||||| ||| |||||||||| || ||| ||| ||||||||||||||| || ||| ||||| ||||| || || |||||||||||    
T  35828992 cgctgcttaaacatcttgggtccatagtacaaagcgacggagaaatagaagcatatgtaaatcatcgaattcgatctgtgtggttgaaat 35828903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 37463777 - 37463636
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||  |||||||| ||||||| ||||| |||||| |||| || || |||||||| |||||||||||||| ||||  ||||||||||||||| |||    
T  37463777 gattttcctataacaataggattgcaccaagggtcaaccctaagcccttacctttttactttagttttggatgttcttacggaacacatccaagagttag 37463678  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtcctacttg 197  Q
    || ||||||||||| |||||| | |||| | |||||| ||||    
T  37463677 caccgagatgtatgctttttgcagatgacgtagtcctgcttg 37463636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 51601463 - 51601559
Alignment:
Q  94 cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||||||||||||||| ||||||||||||||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  51601463 cctaagtccatatctttttactttagttttggatgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 51601559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 247 - 402
Target Start/End: Original strand, 28528159 - 28528314
Alignment:
Q  247 gcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcaca 346  Q
    |||| ||||||||||||||| ||||||||  ||||| ||||||||| || ||||   ||||||   ||||||| ||| |||||||||||| |||  ||||    
T  28528159 gcctgagtagaagcaagacaaagtatatgggatatagttttagcaagaggcgaagcgtttctagcctagaggtgaaagttggagatcatagcataccaca 28528258  T
Q  347 aattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaag 402  Q
    | ||||||| |||||||||| |||||| ||  || ||||| |||||||||||||||    
T  28528259 agttacacagtttaaatatcttgggtctatgttacaaaacaatggagaaatagaag 28528314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 8671288 - 8671421
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| ||||||||  |||||| | ||| |||||| ||||||| ||||||||||| ||||||||| ||||| | |  ||||||||||||||| |||    
T  8671288 gattttcccataacaatagaattgcacctagggtcaaccctaagtccttatctttttactttagttttg-atgtattgacggaacacatccaagagttag 8671386  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  8671387 caccgagatgtatgctttttgcagatgatgtagtc 8671421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 169
Target Start/End: Complemental strand, 34828029 - 34827888
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacct-aagtccatatctttttaccttagttttgga 126  Q
    |||||||||| || |||||||| ||||| ||||||||  |||||||| | ||||| |||||||||| || ||| || ||  ||||||| |||||||||||    
T  34828029 gtgtgaggactcaagatgaggttaccaatgattttccaataacaataggcttgca-caaggatcaatcttaagaccttacttttttactttagttttgga 34827931  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatg 169  Q
    ||| |||| | |||||||||||||| ||||||| |||| ||||    
T  34827930 tgttcttacataacacatccaagagttagcatcaagatttatg 34827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 366
Target Start/End: Original strand, 40419264 - 40419378
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||| | ||  |||||||   || |||| ||| ||||||||||||||||  ||||| |||    
T  40419264 agtagaagcacgacatagtatatggaatgtaattttagcaaaaggcaaagcatttctagcgtaaaggtgaaagttggagatcatatcataccacaagtta 40419363  T
Q  352 cacaatttaaatatc 366  Q
    |||| ||||||||||    
T  40419364 cacagtttaaatatc 40419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 51441399 - 51441274
Alignment:
Q  316 aggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattca 415  Q
    |||| ||| ||||||||||||||||  | ||| ||||||| |||||||||| ||||||  | ||| |||| || ||||||||||||||| || |||  ||    
T  51441399 aggtgaaagttggagatcatatcataccccaagttacacagtttaaatatcttgggtctttcatacaaaatgacggagaaatagaagcagatctaagcca 51441300  T
Q  416 tcaaattcaatatgggtggttgaaat 441  Q
    ||| ||||||  ||||||||||||||    
T  51441299 tcatattcaagctgggtggttgaaat 51441274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 13027352 - 13027297
Alignment:
Q  120 ttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    ||||||||||||||| |||| |||||||||||||||||  ||||||||||||||||    
T  13027352 ttttggatgtacttacagaaaacatccaagagctagcactgagatgtatgtttttt 13027297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 40419049 - 40419143
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagag 151  Q
    ||||||||| |||||||| ||||||| ||| | ||||| |||||  | |||||||| ||||||||||||||||||||||  |||||||||||||||    
T  40419049 gattttcccataacaata-gattgcaccaatgttcaacactaagcacttatcttttcaccttagttttggatgtacttacggaacacatccaagag 40419143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 46227198 - 46227075
Alignment:
Q  78 ttgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    ||||| |||||||||||| |||| || || |||||||| |||||||||||||||||||   ||||| |||||||| ||||| | |||||||||  |||||    
T  46227198 ttgcaccaaggatcaaccctaagcccttacctttttactttagttttggatgtacttacgaaacacgtccaagagttagcaccaagatgtatgccttttg 46227099  T
Q  177 aaaatgatgcagtcctacttggag 200  Q
     | |||||| || |||| ||||||    
T  46227098 catatgatgtagccctatttggag 46227075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 441
Target Start/End: Original strand, 7921574 - 7921699
Alignment:
Q  316 aggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattca 415  Q
    |||| ||| |||||||||||||| |  ||||| |||||| ||||| ||||| ||| |||||| || |||||||| |||||||||||| | || |||  ||    
T  7921574 aggtgaaagttggagatcatatcttaccacaagttacacgatttatatatcttggatccatagtacaaaacgattgagaaatagaaggagatgtaaacca 7921673  T
Q  416 tcaaattcaatatgggtggttgaaat 441  Q
    || |||||||  ||||| ||||||||    
T  7921674 tcgaattcaagttgggttgttgaaat 7921699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 19936177 - 19936294
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaac-gatggagaaatagaagcaaatataattcatcaaattc 423  Q
    ||||||||||||||||  | ||| |||||   |||||||||| ||||||||||||| ||||  || ||||||||||||||| || ||| |||||  ||||    
T  19936177 ttggagatcatatcataccccaagttacatggtttaaatatcttgggtccataatacaaaaatgaaggagaaatagaagcatatgtaaatcatcgtattc 19936276  T
Q  424 aatatgggtggttgaaat 441  Q
    ||  ||||||||||||||    
T  19936277 aagctgggtggttgaaat 19936294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 441
Target Start/End: Original strand, 51234302 - 51234386
Alignment:
Q  357 tttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    |||||||||| || ||||||| |  |||| ||||||||||| |||||| || ||| |||||||||||||  ||||||||||||||    
T  51234302 tttaaatatcttgagtccatagtgcaaaatgatggagaaattgaagcagatgtaaatcatcaaattcaagttgggtggttgaaat 51234386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 12807694 - 12807635
Alignment:
Q  344 acaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagc 403  Q
    |||| |||||||||||||||||| ||| |||||| |||||||||| | ||||||||||||    
T  12807694 acaagttacacaatttaaatatcttggatccatagtataaaacgacgaagaaatagaagc 12807635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 1210391 - 1210517
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||| |||||||||| ||||||  |  || |||| |||||||||||| ||||| || |||  |    
T  1210391 gaggtgaaagttggagatcatatcataccccaagttacacagtttaaatatcttgggtctttcgtacaaaatgatggagaaataaaagcagatgtaagcc 1210490  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  1210491 atcgtattcaagctgggtggttgaaat 1210517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 7813911 - 7813996
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||||  ||||||||||||||||||| | |||| ||||||||  || ||| ||||||||||||||||| | |||||| ||||    
T  7813911 tatctttttattttagttttggatgtacttaaaaaaca-atccaagaattaacattgagatgtatgttttttgcagatgatgtagtc 7813996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 441
Target Start/End: Original strand, 27445545 - 27445670
Alignment:
Q  316 aggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattca 415  Q
    |||| ||| ||||||||| ||||||  | ||| ||||||  ||||| |||  |||||||||| || |||| |||||||||||||||||| || ||| |||    
T  27445545 aggtgaaagttggagatcttatcataccccaagttacacggtttaattatgttgggtccatagtacaaaatgatggagaaatagaagcagatgtaaatca 27445644  T
Q  416 tcaaattcaatatgggtggttgaaat 441  Q
    ||  ||||||  ||| ||||||||||    
T  27445645 tcgtattcaagttggttggttgaaat 27445670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 7814067 - 7814119
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaa 294  Q
    ||||||| | ||||||||||||||| |||||||||||| |||||| |||||||    
T  7814067 cttccgcttgagtagaagcaagacagagtatatgaaatgtaatttcagcaaaa 7814119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 16142771 - 16142675
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatc-aacctaagtccatatctttttaccttagtttt 123  Q
    ||||||||| | | |||||| | | |||| |||||| |||||||||| ||||||||||| | || |||||||| || ||||||||||| ||||||||    
T  16142771 gtgtgaggatgtaagatgagattatcaacaattttctcgtaacaataggattgcatcaaaggtcaaacctaagaccttatctttttactttagtttt 16142675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 16273519 - 16273417
Alignment:
Q  261 aagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaattta 360  Q
    ||||||||||||||| ||| |||||| | ||||||| ||| || ||  |  |||||| | ||| ||||||||||||||||   |||| ||||||||||||    
T  16273519 aagacatagtatatgtaatgtaatttcaacaaaagatgaaatagtttgaccttagagatgaaagttggagatcatatcat---acaagttacacaattta 16273423  T
Q  361 aatatc 366  Q
    ||||||    
T  16273422 aatatc 16273417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 8671494 - 8671692
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||  |||||||| ||| ||| || |||| |||  ||| ||  ||||  || ||||| ||| ||||||||||||||||      
T  8671494 ttccgcttgagtagaagcaagacggagtatatggaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatac 8671593  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    |  || ||||||  |||||||||| ||||||| |  || |||| || | ||||||||||||| || ||| |||||  ||||||  ||||||||| ||||    
T  8671594 cctaagttacacggtttaaatatcttgggtccttcgtacaaaatgacgaagaaatagaagcagatgtaagtcatcgtattcaagctgggtggttaaaat 8671692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 43241017 - 43240891
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||| ||| |  || |||| || |||||||| |||||| || |||  |    
T  43241017 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttggatccttcgtacaaaatgacggagaaatggaagcagatgtaagcc 43240918  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||| ||||||  ||||||||||||||    
T  43240917 atcatattcaagctgggtggttgaaat 43240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 51601704 - 51601830
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  51601704 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 51601803  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  |||||||| |||||    
T  51601804 atcgtattcaagctgggtggtggaaat 51601830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 247 - 353
Target Start/End: Original strand, 52421008 - 52421114
Alignment:
Q  247 gcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcaca 346  Q
    |||||||| ||||||||||||  ||||||||||  ||||| ||||||||  ||| ||| ||||  ||| |||| ||| || |||||||||||||  ||||    
T  52421008 gcctaagttgaagcaagacatgatatatgaaatggaatttcagcaaaaggtgaagtatctctaccttataggtgaaagttagagatcatatcatgccaca 52421107  T
Q  347 aattaca 353  Q
    | |||||    
T  52421108 agttaca 52421114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 38205505 - 38205425
Alignment:
Q  117 tagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttg 197  Q
    |||||||||||||| |||   |||| ||||||||| | | | |||||| ||||||||||| |||||||  |||||||||||    
T  38205505 tagttttggatgtagttacgtaacatatccaagagtttgaaccgagatatatgttttttgtaaatgatatagtcctacttg 38205425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 15216216 - 15216068
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||||||  |||   ||||||||| |||||||| || |||| |||||||||||| ||||||| ||||||||||| |||||||||||    
T  15216216 gtgtgaggacgcaggatgaggataccgtagattttcccataacaataggactgcaccaaggatcaaccctaagtccttatctttttactttagttttgga 15216117  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||||| | |||||||||||||||| ||||| |||||||||||||||||    
T  15216116 tgtactgacagaacacatccaagagttagcaccgagatgtatgtttttt 15216068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 36566185 - 36566022
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||||   ||  | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  36566185 gtgtgaggacgcaggatgagactactgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 36566086  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  36566085 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 36566022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 42854957 - 42854794
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||| |  |||   ||||||||  |||||||| || |||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  42854957 gtgtgaggacgcaggatgaagataccgtagattttcctataacaataggactgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 42854858  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||| || |||||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  42854857 tgtcctgatagaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 42854794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 36544490 - 36544638
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||| | ||||||||||| |||||||||||    
T  36544490 gtgtgaggacgcaggatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagttcttatctttttactttagttttgga 36544589  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||| | ||  |||||||||||||| |||||  |||||||||| |||||    
T  36544590 tgtattgatgcaacacatccaagagttagcactgagatgtatgcttttt 36544638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 12492757 - 12492623
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacct-aagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    |||||| || |||||||| ||||||| ||||| |||| || |||| | ||||||||||| ||||||||||||||| | |  ||||||||||||||| |||    
T  12492757 gatttttccataacaataggattgcaccaagggtcaatcttaagttcttatctttttactttagttttggatgtattgacggaacacatccaagagttag 12492658  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  12492657 caccgagatgtatgctttttgcagatgatgtagtc 12492623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 252 - 398
Target Start/End: Original strand, 38667142 - 38667286
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||||||||||| ||||||| ||| || |||||||||||| |||| || ||||||  ||||||| ||| ||||||||||||||||   |||| |||    
T  38667142 agtagaagcaagacatggtatatgtaatgtagttttagcaaaaggcgaagtagttctatcctagaggtgaaacttggagatcatatcat---acaagtta 38667238  T
Q  352 caca-atttaaatatcatgggtccataatataaaacgatggagaaata 398  Q
    || |  |||||||||| ||||| |||| || |||||||| ||||||||    
T  38667239 caaagttttaaatatcttgggttcatagtacaaaacgatagagaaata 38667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 41445219 - 41445074
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctt-tttaccttagttttggatgtacttatagaacacatccaagagcta 154  Q
    ||||||||| |||||||||||||| | ||||| | |||| |||| || ||| || ||||| ||| ||||||||||| |||   ||||||||||| |||||    
T  41445219 gattttcccataacaatatgattgtaccaagggttaaccctaagcccttattttgtttactttaattttggatgtaattacgaaacacatccaaaagcta 41445120  T
Q  155 gcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    ||| |||||||| | ||||||| | |||||| ||||||||||||||    
T  41445119 gcaccgagatgtctattttttgtagatgatgtagtcctacttggag 41445074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 242 - 405
Target Start/End: Complemental strand, 41445013 - 41444849
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatt 341  Q
    ||||||| | |||| |||||||| | |||||||| ||| ||||||||||||||| ||||  |||||||  |||||||| |||  |||||||||||||||     
T  41445013 cttccgcatgagtaaaagcaagataaagtatatggaatgtaattttagcaaaaggcgaagcatttctaacttagaggtgaaaggtggagatcatatcata 41444914  T
Q  342 tcacaaattacacaatttaaatatcatggg-tccataatataaaacgatggagaaatagaagcaa 405  Q
     ||||| ||||    |||||||||| |||| || || ||| |||| |||| ||||||||||||||    
T  41444913 ccacaagttacttggtttaaatatcttgggttcaatgatacaaaatgatgtagaaatagaagcaa 41444849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 441
Target Start/End: Original strand, 36544735 - 36544924
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    ||||||||||||||| |||||||| ||| ||| ||||||  |||  ||| ||  ||||  || ||||| ||| ||||||||||||||||  | ||| |||    
T  36544735 agtagaagcaagacagagtatatggaatgtaactttagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagtta 36544834  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    ||   ||||||||||||||| |  |  || |||| || ||||||||||||||| || ||| |||||  ||||||  ||||||||||||||    
T  36544835 caaggtttaaatatcatggggctttcgtacaaaatgacggagaaatagaagcagatgtaagtcatcgtattcaagttgggtggttgaaat 36544924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 4033120 - 4033004
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattca 424  Q
    ||||||||||||||||  | ||| ||||||  ||||| |||| ||||| |||| || | || |||||||||||| ||||| || ||| |||||| |||||    
T  4033120 ttggagatcatatcataccccaagttacacggtttaagtatcttgggttcatagtacacaatgatggagaaataaaagcatatgtaaatcatcatattca 4033021  T
Q  425 atatgggtggttgaaat 441  Q
    |  ||||||||||||||    
T  4033020 agttgggtggttgaaat 4033004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 402
Target Start/End: Original strand, 25985128 - 25985273
Alignment:
Q  255 agaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacac 354  Q
    |||||||||||| |||||||| ||| ||| |||||||| || ||||  |||||||  |||||||| ||| |||  |||||||||||  ||||| ||||||    
T  25985128 agaagcaagacagagtatatggaatgtaagtttagcaagaggcgaagcatttctagcttagaggtgaaagttg--gatcatatcataccacaagttacac 25985225  T
Q  355 aatttaaatatcatgggtccataatataaaacgatggagaaatagaag 402  Q
      |||||||||  ||| || ||| || ||||  |||||||||||||||    
T  25985226 ggtttaaatatattggatctatagtacaaaaatatggagaaatagaag 25985273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 417
Target Start/End: Complemental strand, 33830929 - 33830767
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    ||||||||||| |||||||||||| ||| ||||||||||||| |||||| || |||||  |||||  | ||| ||||| ||| ||||||   | || |||    
T  33830929 agtagaagcaaaacatagtatatgtaatgtaattttagcaaacgacgaagtagttctaccttagacatgaaagttggatatcttatcat---ataagtta 33830833  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatc 417  Q
    |||| |||||||||  |||||||||  || |||| || | ||||||| ||||| || ||| |||||    
T  33830832 cacagtttaaatattttgggtccattgtacaaaatgacgaagaaataaaagcatatgtaaatcatc 33830767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 326 - 441
Target Start/End: Complemental strand, 42854629 - 42854514
Alignment:
Q  326 tggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaa 425  Q
    |||||||||||||||  | ||| ||||||  |||||||||| |||||||||  || |||| | | |||||||||||||| || ||| |||||  ||||||    
T  42854629 tggagatcatatcataccccaagttacacggtttaaatatcttgggtccatcgtacaaaatgtttgagaaatagaagcagatgtaaatcatcgtattcaa 42854530  T
Q  426 tatgggtggttgaaat 441  Q
      ||||||||||||||    
T  42854529 gctgggtggttgaaat 42854514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 30579092 - 30579002
Alignment:
Q  108 tttttaccttagttttg-gatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttg 197  Q
    ||||||| ||||||||  |||||||||| ||||||||| ||||||||||||  ||||||| || |||||||| ||| || |||||| ||||    
T  30579092 tttttactttagttttttgatgtacttacagaacacatacaagagctagcactgagatgtttgctttttgaagatggtgtagtccttcttg 30579002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 36565877 - 36565751
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  36565877 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtcctttgtacaaaatgacggagaaatagaagcagatgtaagcc 36565778  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  36565777 atcgtattcaagctgggtggttgaaat 36565751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 3284861 - 3284938
Alignment:
Q  58 attttcccgtaacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtactta 134  Q
    |||||| | ||||||||  |||||| ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||    
T  3284861 attttctcataacaatagtattgcaccaaggttcaacactaagcccttatcttttcaccttagttttggatgtactta 3284938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 18124878 - 18124932
Alignment:
Q  371 gtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaa 425  Q
    |||||||||| |||| |||||||||||||||||| || ||| ||||| |||||||    
T  18124878 gtccataatacaaaatgatggagaaatagaagcagatgtaactcatcgaattcaa 18124932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 366
Target Start/End: Complemental strand, 18849754 - 18849700
Alignment:
Q  312 ttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatc 366  Q
    |||||||||||||||||||||||||||||  | ||| ||||||  ||||||||||    
T  18849754 ttagaggtaaaaattggagatcatatcataccccaagttacacggtttaaatatc 18849700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 372
Target Start/End: Complemental strand, 28300803 - 28300687
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||||| ||||||||||||  ||| | |||| | ||||||||||| || ||| |  |||||||| |||  |||||||||||||||   |||| |||    
T  28300803 agtagaagca-gacatagtatatttaatgtgatttcatcaaaagacgaagtagttcgaccttagaggtgaaagctggagatcatatcat---acaagtta 28300708  T
Q  352 cacaatttaaatatcatgggt 372  Q
    |||| |||||||||| |||||    
T  28300707 cacagtttaaatatcttgggt 28300687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 11130796 - 11130727
Alignment:
Q  116 ttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtat-gttttttgaaaatgat 184  Q
    |||||||| |||||||||||  || |||||||| | |||||||| ||||||||  |||||||||||||||    
T  11130796 ttagtttttgatgtacttatgaaagacatccaaaatctagcatcaagatgtatatttttttgaaaatgat 11130727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 404
Target Start/End: Complemental strand, 12492478 - 12492389
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 404  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || |||||||||||||||    
T  12492478 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagca 12492389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 13984202 - 13984258
Alignment:
Q  241 acttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagac 297  Q
    |||||||| | ||||||||||||||| |||||||| ||| ||| || ||||||||||    
T  13984202 acttccgcatgagtagaagcaagacagagtatatggaatgtaacttcagcaaaagac 13984258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 38666986 - 38667054
Alignment:
Q  108 tttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    ||||||| ||||||||| ||||||||  | ||||||||||| ||||||||  || |||||| |||||||    
T  38666986 tttttacattagttttgaatgtacttgcaaaacacatccaatagctagcactgaaatgtattttttttg 38667054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 51448657 - 51448490
Alignment:
Q  24 actggtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttt 122  Q
    ||||||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||    
T  51448657 actggtgtgaggacgcaggatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttt 51448558  T
Q  123 tggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||||| | |  ||||||||||||||| ||||||||||||||||| |||||| | |||||| ||||    
T  51448557 tggatgtattgacggaacacatccaagagttagcatcgagatgtatgctttttgcagatgatgtagtc 51448490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 76 - 200
Target Start/End: Original strand, 29816891 - 29817016
Alignment:
Q  76 gattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttt 174  Q
    ||||||| ||||| |||||| |||| || || ||||||||||||| |||||||||||||| | ||||||||| |||| ||||| ||||||||||||||||    
T  29816891 gattgcaccaaggctcaaccctaagcccttacctttttaccttaggtttggatgtacttacaaaacacatcctagagttagcaccgagatgtatgttttt 29816990  T
Q  175 tgaaaatgatgcagtcctacttggag 200  Q
    |||| ||||| |||||||||||||||    
T  29816991 tgaagatgatacagtcctacttggag 29817016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 52138166 - 52138314
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| ||||||||  |||||| |||||||||||| ||||||| ||||||||||| |||||||||||    
T  52138166 gtgtgaggacgcaggatgggactaccgaagattttcccataacaatagaattgcaccaaggatcaaccctaagtccttatctttttactttagttttgga 52138265  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||    
T  52138266 tgtattgacggaacacatccaagagttagcaccgagatgtatgcttttt 52138314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 250 - 441
Target Start/End: Original strand, 48221365 - 48221556
Alignment:
Q  250 taagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaat 349  Q
    |||||||||| ||||||||||||||| ||| |||||| ||||||||  | | || |||||| |||||||| ||| ||| ||||||||||||  ||||| |    
T  48221365 taagtagaagtaagacatagtatatgtaatgtaatttcagcaaaaggtgtagtagttctatcttagaggtgaaagttgaagatcatatcataccacaagt 48221464  T
Q  350 tacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    |||||| |||||||||| ||| | |||| || |||| ||  ||||| |||||||| || ||| ||||| |||||||  ||| ||||||||||    
T  48221465 tacacattttaaatatcttggattcatagtacaaaatgacagagaagtagaagcatatgtaaatcatcgaattcaaactggatggttgaaat 48221556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 250 - 441
Target Start/End: Original strand, 25190960 - 25191151
Alignment:
Q  250 taagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaat 349  Q
    ||||||||||||||||  |||||||| ||| ||| || ||||||||  ||| |   ||||  || ||||| ||| ||||||||||||||||  | ||| |    
T  25190960 taagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcatagcccaagt 25191059  T
Q  350 tacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    |||||  |||||||||| |||||| ||| || |||| ||||||||||||||||||||| ||| |||||  ||||||  ||||||||||||||    
T  25191060 tacacggtttaaatatcttgggtctatagtacaaaatgatggagaaatagaagcaaatgtaaatcatcgtattcaagctgggtggttgaaat 25191151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 97 - 173
Target Start/End: Original strand, 9258294 - 9258370
Alignment:
Q  97 aagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtttt 173  Q
    |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||| ||||| |||||||||||||||    
T  9258294 aagtccttatctttttactttagttttggatgtacttacggaacacatccaagagttagcaccgagatgtatgtttt 9258370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 402
Target Start/End: Original strand, 44395002 - 44395163
Alignment:
Q  241 acttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    ||||||||||| |||||||||||| | |||||||| |||  || ||||||||||| | ||  ||||||| ||||||| | ||| |||||||||||| ||     
T  44395002 acttccgcctatgtagaagcaagatagagtatatggaatgcaactttagcaaaaggcaaagcatttctagtttagagatgaaagttggagatcataccac 44395101  T
Q  341 ttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaag 402  Q
      | ||| |||||| |||||||||||  ||||||||| ||  |||| |  ||||||||||||    
T  44395102 aacgcaagttacacgatttaaatatctcgggtccatagtactaaacaacagagaaatagaag 44395163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 377
Target Start/End: Original strand, 19757645 - 19757776
Alignment:
Q  246 cgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcac 345  Q
    ||||| ||||||||||||||| |||||||| ||| ||| ||||||||||| | || || | |||  || ||||| ||| ||||||||||||||||  | |    
T  19757645 cgccttagtagaagcaagacagagtatatggaatgtaactttagcaaaaggcaaagtagtcctaccttggaggtgaaagttggagatcatatcatacccc 19757744  T
Q  346 aaattacacaatttaaatatcatgggtccata 377  Q
    || |||||   |||||||||| ||||||||||    
T  19757745 aagttacatggtttaaatatcttgggtccata 19757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 364
Target Start/End: Complemental strand, 43111715 - 43111606
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||| ||||||||||||||| ||| |||||| ||||||||| ||| || || ||  |||||||| | | ||||||||||||||||   | || |||    
T  43111715 agtagaagtaagacatagtatatgtaatgtaatttcagcaaaagaagaagtagttgtaccttagaggtgacagttggagatcatatcat---ataagtta 43111619  T
Q  352 cacaatttaaata 364  Q
    |||||||||||||    
T  43111618 cacaatttaaata 43111606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 50630198 - 50630092
Alignment:
Q  94 cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtccta 193  Q
    |||||| || ||||||||||| |||||||||||| ||||||  ||||||||||||| ||||||| | || || ||| |||||| ||| |||  ||| |||    
T  50630198 cctaagcccttatctttttactttagttttggatttacttacggaacacatccaagtgctagcaccaaggtgcatgatttttgcaaacgatatagttcta 50630099  T
Q  194 cttggag 200  Q
    |||||||    
T  50630098 cttggag 50630092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 27917219 - 27917320
Alignment:
Q  316 aggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattca 415  Q
    |||| ||| |||||||||||||||| || ||| ||||||  |||||||||| || ||||||| || |||| || ||||||||| ||||| |||||| |||    
T  27917219 aggtgaaagttggagatcatatcatatcccaagttacacggtttaaatatcttgagtccatagtacaaaatgacggagaaatataagcatatataaatca 27917318  T
Q  416 tc 417  Q
    ||    
T  27917319 tc 27917320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 48221110 - 48221259
Alignment:
Q  19 attcaactggtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacctaagtc-catatctttttacctt 117  Q
    ||||| || ||||||||| ||| |||| |  |||| |||| ||| || |||||||| ||||||| |||| | |||||| ||   ||||  ||||||| ||    
T  48221110 attcagctagtgtgaggatgcaggatgcgaccaccgacgaattttccataacaataggattgcaccaagaaccaaccttaggatcataaatttttacttt 48221209  T
Q  118 agttttggatgtacttatagaacacatccaagagctagcatcgagatgta 167  Q
    |||||| |||||||||  | |||||||||||||| |||||||||||||||    
T  48221210 agttttagatgtacttgcaaaacacatccaagagttagcatcgagatgta 48221259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 1448312 - 1448224
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    |||||||| |||||| | ||||||||||| ||||||| ||| ||  |||  |||||||  |||||||||||| ||||||||||||||||    
T  1448312 agtagaagaaagacaaaatatatgaaataaaattttaacaagaggtgaaacatttctagcttagaggtaaaagttggagatcatatcat 1448224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 261 - 401
Target Start/End: Complemental strand, 32490414 - 32490274
Alignment:
Q  261 aagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaattta 360  Q
    |||||| ||||||||||||  || |||||||||||  ||| | ||||||  ||| || | ||| ||| ||||||||||||  ||||| ||||||||||||    
T  32490414 aagacagagtatatgaaatgcaagtttagcaaaaggtgaagtgtttctaacttatagatgaaagttgaagatcatatcataccacaagttacacaattta 32490315  T
Q  361 aatatcatgggtccataatataaaacgatggagaaatagaa 401  Q
    ||| || |||||| ||| ||||| |||| | | ||||||||    
T  32490314 aatttcttgggtctatattataagacgacgaaaaaatagaa 32490274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 19736614 - 19736677
Alignment:
Q  137 gaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    ||||||||||||||| ||||| | ||||||||| |||||| | ||||||||||||| |||||||    
T  19736614 gaacacatccaagagttagcaccaagatgtatgctttttgcagatgatgcagtcctgcttggag 19736677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 19757432 - 19757495
Alignment:
Q  137 gaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    ||||||||||||||| ||||| | ||||||||| |||||| | ||||||||||||| |||||||    
T  19757432 gaacacatccaagagttagcaccaagatgtatgctttttgcagatgatgcagtcctgcttggag 19757495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 26592302 - 26592236
Alignment:
Q  109 ttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||||| ||| ||| ||||||||||| ||||||| |||||||| |||||| | ||||||||||||||    
T  26592302 ttttactttactttgggatgtacttacagaacacgtccaagagttagcattgtgatgtatgtttttt 26592236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 38849740 - 38849866
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| |||||||| | || |||| || ||||||||||||||| || |||  |    
T  38849740 gaggtgaaagttggagatcatatcatacctcaatttacacggtttaaatatcttgggtccacagtacaaaatgacggagaaatagaagcagatgtaagcc 38849839  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    ||   ||||||  ||||||||||||||    
T  38849840 attgtattcaagctgggtggttgaaat 38849866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 47542347 - 47542221
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||| ||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  47542347 gaggtgaaagttggagatcatttcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 47542248  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||| ||||||  ||||||||||||||    
T  47542247 atcatattcaagctgggtggttgaaat 47542221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 441
Target Start/End: Complemental strand, 51448417 - 51448219
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||  |||||||||||| ||| || |||  |||  ||| ||  ||||  || ||||| ||| ||||||||||||||||      
T  51448417 ttccgcttgagtagaagcaagacggagtatatgaaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatac 51448318  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||   |||  ||||||  ||||||||||||||    
T  51448317 cccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagctatcgtattcaagctgggtggttgaaat 51448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 243 - 340
Target Start/End: Complemental strand, 30724508 - 30724411
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    ||||||||||| |||||||| ||| |||||||||||| || | |||||||||| | || | |||||  |||| |||| ||  ||||||||||||||||    
T  30724508 ttccgcctaagaagaagcaaaacaaagtatatgaaatgtattattagcaaaaggcaaagtgtttctcgtttataggtgaacgttggagatcatatcat 30724411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 1470796 - 1470708
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    |||||||  |||||| ||||||||||||| ||||||||||| ||  |||| |||| |   |||||||| ||| ||||||||||||||||    
T  1470796 agtagaataaagacagagtatatgaaataaaattttagcaagaggtgaatcatttattgcttagaggtgaaagttggagatcatatcat 1470708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 404
Target Start/End: Original strand, 15750810 - 15750973
Alignment:
Q  241 acttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    ||||| ||||||||||||| |||| | |||||||| ||| |||||| |||||||| | || || || ||| ||| |  | ||| ||||||||||||| |     
T  15750810 acttctgcctaagtagaagtaagataaagtatatggaatgtaatttcagcaaaaggcaaagtagttttatcttacatttgaaagttggagatcatatgac 15750909  T
Q  341 ttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 404  Q
     || |||||||||  ||||||| ||  ||||| ||||||  ||||||| ||||| || ||||||    
T  15750910 atctcaaattacatgatttaaacattttgggttcataatgcaaaacgaaggagacatcgaagca 15750973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 19757559 - 19757610
Alignment:
Q  244 tccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaag 295  Q
    ||||||| ||||||||||||||| |||||||| ||| ||| |||||||||||    
T  19757559 tccgccttagtagaagcaagacagagtatatggaatgtaactttagcaaaag 19757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 418
Target Start/End: Original strand, 26489975 - 26490066
Alignment:
Q  327 ggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatca 418  Q
    ||||||||||||||    ||| |||||  ||||||||||| ||| ||||| |||||||| || ||||||||||||||| || ||| ||||||    
T  26489975 ggagatcatatcatactccaagttacatgatttaaatatcttggttccatgatataaaatgacggagaaatagaagcagatgtaaatcatca 26490066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 38849432 - 38849595
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    |||||||||||||  ||| ||  ||||| |||||| || ||||| || ||||||| ||||| ||||   ||||||| |||||||||   |||||||||||    
T  38849432 gtgtgaggacgcaaaatggggctaccaaagatttttccataacagtaggattgcaccaagggtcaattgtaagtccttatcttttttatttagttttgga 38849531  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||     |||||| ||||||||  |||| ||||||||||| |||||| | |||||| ||||    
T  38849532 tgtacgggcggaacacgtccaagagtaagcaccgagatgtatgctttttgtagatgatgtagtc 38849595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 805377 - 805462
Alignment:
Q  115 cttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    |||||||| |||||| ||||  |||||||||||||||| |||  | ||||||||  |||||| | ||||| | |||||||||||||    
T  805377 cttagtttgggatgtgcttacggaacacatccaagagcaagcgccaagatgtatactttttgcatatgatacggtcctacttggag 805462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 25190827 - 25190880
Alignment:
Q  137 gaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  25190827 gaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 25190880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 365
Target Start/End: Complemental strand, 26592147 - 26592022
Alignment:
Q  240 aacttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatca 339  Q
    ||||||||| | ||||||| ||||| |||  | ||| |||  ||||||||||||||||  | ||||||||| |||||||| ||| ||||| | |||||||    
T  26592147 aacttccgcatgagtagaaacaagatataacaaatggaatgcaattttagcaaaagacagaatatttctatcttagaggtgaaagttggataacatatca 26592048  T
Q  340 tttcacaaattacacaatttaaatat 365  Q
    |  ||||  ||| ||| |||||||||    
T  26592047 taccacatgttatacattttaaatat 26592022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 11593291 - 11593454
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||||   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  11593291 gtgtgaggacgcaggatgagactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 11593390  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  11593391 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 11593454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 46356795 - 46356637
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||||| ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  46356795 gtgtgaggacgcaggatgggactaccaaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 46356696  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatg 185  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | ||||||    
T  46356695 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatg 46356637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 32629946 - 32630109
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| ||  |||   ||||||||| |||||||| || |||| ||||| |||||| ||||||| |||||||||||  ||||||||||    
T  32629946 gtgtgaggacgcaggatggggataccgtagattttcccataacaataggactgcaccaagggtcaaccctaagtccttatctttttactctagttttgga 32630045  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||| |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  32630046 tgtactaacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 32630109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 33350721 - 33350587
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| ||||||| ||||| |||||| ||| ||| ||||||||||| ||||||||||||||| | |  ||||||||||||||| |||    
T  33350721 gattttcccataacaataggattgcaccaagggtcaaccctaactccttatctttttactttagttttggatgtattgacggaacacatccaagagttag 33350622  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  33350621 caccgagatgtatgctttttgcagatgatgtagtc 33350587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 39907294 - 39907160
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| ||||||| ||||| |||||| ||||||| |||||||| || ||||||||||||||| | |  ||||||||||||||| |||    
T  39907294 gattttcccataacaataggattgcaccaagggtcaaccctaagtccttatcttttcactttagttttggatgtattgacggaacacatccaagagttag 39907195  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  39907194 caccgagatgtatgctttttgcagatgatgtagtc 39907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 49028648 - 49028782
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| ||||||||||||||| | |  ||||||||||||||| |||    
T  49028648 gattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttggatgtattgacggaacacatccaagagttag 49028747  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || | ||||||||| |||||| | |||||| ||||    
T  49028748 caccaagatgtatgctttttgcagatgatgtagtc 49028782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 36651363 - 36651495
Alignment:
Q  59 ttttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagca 157  Q
    ||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||| |||||| | |  ||||||||||||||| |||||    
T  36651363 ttttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttagatgtattgacggaacacatccaagagttagca 36651462  T
Q  158 tcgagatgtatgttttttgaaaatgatgcagtc 190  Q
     ||||||||||| |||||| | |||||| ||||    
T  36651463 ccgagatgtatgctttttgcagatgatgtagtc 36651495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 43793938 - 43793803
Alignment:
Q  67 taacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatg 165  Q
    |||||||| ||||||| ||||| | ||| ||||| || |||||||| |||||||| ||||||||||||| | ||||||||||||||| |||| | |||||    
T  43793938 taacaataagattgcaccaaggttgaacactaagcccttatcttttcaccttagtgttggatgtacttacaaaacacatccaagagcgagcaccaagatg 43793839  T
Q  166 tatg-ttttttgaaaatgatgcagtcctacttggag 200  Q
    |||| ||||||| |||||||  ||||||||||||||    
T  43793838 tatgcttttttgcaaatgatatagtcctacttggag 43793803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 36870164 - 36870070
Alignment:
Q  96 taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||| ||||||||||| ||||||||||||||||| |  ||||||||||||||||||||| ||||||||||| |||||| | |||||| ||||    
T  36870164 taagtccttatctttttactttagttttggatgtactgacggaacacatccaagagctagcaccgagatgtatgctttttgcagatgatgtagtc 36870070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 28 - 168
Target Start/End: Original strand, 38896949 - 38897090
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||| | |||||||||||    
T  38896949 gtgtgaggacgcaggatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttgctttagttttgga 38897048  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtat 168  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||    
T  38897049 tgtattgacggaacacatccaagagttagcaccgagatgtat 38897090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 38606580 - 38606777
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||||||| |||||||  ||| |   ||||  || ||||| ||| |||||||||||||||| |    
T  38606580 ttccgcctgagtagaagcaagacggagtatatggaatgtaatttttgcaaaaggagaagtgggtctacctt-gaggtgaaagttggagatcatatcatat 38606678  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| |||||||||| || |||| || | ||||||||||||| || |||  ||||  ||||||  ||||||||||||||    
T  38606679 cccaagttacacggtttaaatatcttgggtccatagtacaaaatgacgaagaaatagaagcagatgtaaaccatcgtattcaagctgggtggttgaaat 38606777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 24426432 - 24426284
Alignment:
Q  29 tgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggat 127  Q
    |||||||| ||| |||||||| ||  | |||||| |  |||||| ||||||||| ||||| |||||| ||||| | |||||||||||  || ||||||||    
T  24426432 tgtgaggatgcaagatgaggttactgatgatttttctataacaacatgattgcaccaagggtcaaccataagtgcttatctttttactataattttggat 24426333  T
Q  128 gtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    ||||||||  |||||||  ||||| |||||||||||||||| |||||||    
T  24426332 gtacttatgcaacacatttaagagttagcatcgagatgtatattttttg 24426284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 38606415 - 38606525
Alignment:
Q  67 taacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatg 165  Q
    |||||||| || |||| ||||| |||||| | ||||| ||||||||| | ||||||||||||||||| | |||||||||||||||| ||||| | |||||    
T  38606415 taacaataggactgcaccaagggtcaacccttagtccttatctttttgctttagttttggatgtactgacagaacacatccaagagttagcaccaagatg 38606514  T
Q  166 tatgttttttg 176  Q
    |||| ||||||    
T  38606515 tatgctttttg 38606525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 165
Target Start/End: Original strand, 20499486 - 20499585
Alignment:
Q  67 taacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatg 165  Q
    |||||||| ||||||| ||||| | |||| |||| || ||||||||||| ||| ||||||||||||||   ||||||||||||||||||||| |||||||    
T  20499486 taacaataggattgcaccaaggttgaaccataagcccttatctttttactttacttttggatgtacttgcggaacacatccaagagctagcaccgagatg 20499585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 395
Target Start/End: Original strand, 32630181 - 32630333
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||| || ||||||||  ||| |   ||||  || ||||| ||| ||||||||||||||||      
T  32630181 ttccgcctgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcatac 32630280  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaa 395  Q
    | ||| ||||||  |||||||||| |||||||||| || |||| |||||||||    
T  32630281 cccaagttacacggtttaaatatcttgggtccatattacaaaatgatggagaa 32630333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 183
Target Start/End: Complemental strand, 24178072 - 24177983
Alignment:
Q  94 cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatga 183  Q
    ||||||| | ||||||||||  ||||||||||||||||| |  ||||||  ||||||| ||||| ||||||||||| |||||| ||||||    
T  24178072 cctaagttcttatctttttattttagttttggatgtactgacggaacacgcccaagagttagcaccgagatgtatgctttttgcaaatga 24177983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 48055732 - 48055623
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    |||||| || |||||||| ||||||| ||||| | |||| |||| || ||||||||||| ||| |||||||||||| |   || ||||||||||||||||    
T  48055732 gatttttccataacaataggattgcaccaaggctgaaccataagcccttatctttttactttacttttggatgtacctgcggagcacatccaagagctag 48055633  T
Q  156 catcgagatg 165  Q
    || |||||||    
T  48055632 caccgagatg 48055623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 24177821 - 24177721
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattca 424  Q
    ||||||||||||||||  | ||| ||||||  ||||||||||| ||||| ||| || |||| || ||||||||||||||| || ||| |||||| |||||    
T  24177821 ttggagatcatatcataccccaatttacacggtttaaatatcacgggtcaatagtacaaaatgacggagaaatagaagcagatgtaaatcatcatattca 24177722  T
Q  425 a 425  Q
    |    
T  24177721 a 24177721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 24436594 - 24436514
Alignment:
Q  254 tagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatca 334  Q
    ||||||||||||| |||||||||||| |||||||| |||||| |||| ||||| |||| | ||||| ||| || |||||||    
T  24436594 tagaagcaagacaaagtatatgaaatgtaattttaacaaaaggcgaaatatttttattgttgaggtgaaagtttgagatca 24436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 21520288 - 21520229
Alignment:
Q  116 ttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    ||||||||||||||| |||  ||||||||||||||| ||||| ||||||||||| |||||    
T  21520288 ttagttttggatgtatttacggaacacatccaagagttagcaccgagatgtatgcttttt 21520229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 252 - 399
Target Start/End: Complemental strand, 43793739 - 43793592
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    ||||||||||||||| |||||| | ||| ||| |||||||| || ||||   |||| | | ||||||| ||| || |||||||||||||  ||| | |||    
T  43793739 agtagaagcaagacagagtatacggaatgtaaatttagcaagaggcgaagcgtttcgagtgtagaggtgaaagttagagatcatatcataccactagtta 43793640  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatag 399  Q
    |||| |||||||||| |||||| ||| || |||| || | ||||||||    
T  43793639 cacattttaaatatcttgggtctatagtacaaaatgacgaagaaatag 43793592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 37616490 - 37616688
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||  |||||||| ||| ||| || |||| |||  ||| ||  ||||  || ||||| |||  |||||||||||||||      
T  37616490 ttccgcttgagtagaagcaagacggagtatatggaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaaggtggagatcatatcatac 37616589  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| |||||| ||||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |||   ||||||  ||||||||||||||    
T  37616590 cccaagttacacgatttaaatatcttgggtcctttgtacaaaatgacggagaaatagaagcagatgtaagccattgtattcaagctgggtggttgaaat 37616688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 46356487 - 46356361
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  46356487 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtcctttgtacaaaatgacggagaaatagaagcagatgtaagcc 46356388  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  46356387 atcgtattcaagttgggtggttgaaat 46356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 11593606 - 11593732
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||| ||||||||||||  | ||| ||| ||  |||||||||| ||||||| |  || |||| |||||||||||||||||| || |||  |    
T  11593606 gaggtgaaagttgaagatcatatcataccccaagttagacggtttaaatatcttgggtccttcgtacaaaatgatggagaaatagaagcagatgtaagcc 11593705  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  11593706 atcgtattcaagctgggtggttgaaat 11593732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 23087970 - 23087896
Alignment:
Q  116 ttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||||||||| |||||| | ||||||||||| || |||||  ||||||||||| ||||| | |||||| ||||    
T  23087970 ttagttttggatatacttacaaaacacatccaacagatagcactgagatgtatgtattttgcagatgatgtagtc 23087896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 441
Target Start/End: Complemental strand, 33350514 - 33350316
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||  |||||||| ||| ||| || |||  |||| ||| ||  ||||  || ||||| ||| ||||||||||||||||      
T  33350514 ttccgcttgagtagaagcaagacgaagtatatggaatgtaacttcagcggaagaagaagtaggtctaccttggaggtgaaagttggagatcatatcatac 33350415  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  ||||||||||  |||||  |  || |||| || ||||||||||||||| || |||  ||||  ||||||  ||||||||||||||    
T  33350414 cccaagttacacggtttaaatatctagggtctttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattcaagctgggtggttgaaat 33350316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 36651640 - 36651766
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| |||| |  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  36651640 gaggtgaaagttggagatcatatcataccccaagttacgcggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 36651739  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  36651740 atcgtattcaagctgggtggttgaaat 36651766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Complemental strand, 18608316 - 18608275
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatc 366  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  18608316 ttggagatcatatcatatcacaagttacacattttaaatatc 18608275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 18626562 - 18626603
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatc 366  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  18626562 ttggagatcatatcatatcacaagttacacattttaaatatc 18626603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 18637236 - 18637277
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatc 366  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  18637236 ttggagatcatatcatatcacaagttacacattttaaatatc 18637277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 366
Target Start/End: Original strand, 18650671 - 18650712
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatc 366  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  18650671 ttggagatcatatcatatcacaagttacacattttaaatatc 18650712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 31004672 - 31004725
Alignment:
Q  137 gaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  31004672 gaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 31004725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 404
Target Start/End: Original strand, 49028913 - 49029002
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 404  Q
    ||||| ||| |||||||||| |||||  | ||| ||||||  |||||||||| ||||||| |  || |||| ||||||||||||||||||    
T  49028913 gaggtgaaagttggagatcagatcataccccaagttacacggtttaaatatcttgggtcctttgtacaaaatgatggagaaatagaagca 49029002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 17101338 - 17101259
Alignment:
Q  116 ttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttgg 198  Q
    ||||||||||||||||| ||||||||   || | |||||||| ||||||||| | |||||||| |||||  |||| |||||||    
T  17101338 ttagttttggatgtactaatagaaca---cctatagctagcaccgagatgtaggctttttgaagatgatttagtcttacttgg 17101259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 5e-30; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 2609866 - 2610029
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||||| ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  2609866 gtgtgaggacgcaggatgggactaccaaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 2609965  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  2609966 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 2610029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 24584521 - 24584387
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |  ||||||||||||||| ||     
T  24584521 gattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttggatgtactaacggaacacatccaagagttat 24584422  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || |||||||||||||||||| | |||||| ||||    
T  24584421 caccgagatgtatgttttttgcagatgatgtagtc 24584387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 452560 - 452412
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||||   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  452560 gtgtgaggacgcaggatgagactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 452461  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||    
T  452460 tgtattgacggaacacatccaagagttagcaccgagatgtatgcttttt 452412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 38453562 - 38453399
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| | | ||| | ||||||||| |||||||| ||||||| ||||| |||||| |||||||  |||| ||||| |||||||||||    
T  38453562 gtgtgaggacgcaggatgggattaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtcctcatctctttactttagttttgga 38453463  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | | | |||||||||||||| ||||| |||||||||||| ||||| | |||||| ||||    
T  38453462 tgtattgacaaaacacatccaagagttagcaccgagatgtatgtattttgcagatgatgtagtc 38453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 8180162 - 8180296
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| ||||||  ||||| |||||| ||||||| ||||||||||| ||||||||||||||| | |   |||||||||||||| |||    
T  8180162 gattttcccataacaataggattgcgccaagggtcaaccataagtccttatctttttactttagttttggatgtattgacgaaacacatccaagagttag 8180261  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  8180262 caccgagatgtatgctttttgcagatgatgtagtc 8180296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 45368540 - 45368406
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| || |||| ||||| |||||| ||||||| ||||||||||| ||||||||||||||| | |  ||||||||||||||  |||    
T  45368540 gattttcccataacaataggactgcaccaagggtcaaccctaagtccttatctttttactttagttttggatgtattgacggaacacatccaagaattag 45368441  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  45368440 caccgagatgtatgctttttgcagatgatgtagtc 45368406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 243 - 441
Target Start/End: Complemental strand, 11992814 - 11992616
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||| || || ||||   ||| |   ||||  |||||||| ||| ||||||||||||||||      
T  11992814 ttccgcctgagtagaagcaagacgaagtatatggaatgtaacttcagtaaaaagagaagtgggtctaccttagaggtgaaagttggagatcatatcatac 11992715  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| |||||| ||| || |||| |||||||||||||||||| || ||| |||||  ||||||  ||||||||||||||    
T  11992714 cccaagttacacggtttaaatatcttgggtctatagtacaaaatgatggagaaatagaagcagatgtaaatcatcgtattcaagctgggtggttgaaat 11992616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 45368259 - 45368134
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||||||||||  |||||||||| ||||||||||||| |||| |||||||||||||||||| || ||| |     
T  45368259 gaggtgaaagttggagatcatatcatacc-caaattacacggtttaaatatcttgggtccataatacaaaatgatggagaaatagaagcagatgtaaatt 45368161  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  45368160 atcgtattcaagctgggtggttgaaat 45368134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 876521 - 876634
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||| | ||||||| ||||| ||||| ||||| || |||||||| ||||| ||||||||||||||||  |||||||||||||||| ||    
T  876521 gattttcccataacaacaggattgcaccaaggttcaacactaagcccttatcttttcaccttcgttttggatgtacttacggaacacatccaagagcgag 876620  T
Q  156 catcgagatgtatg 169  Q
    || | |||||||||    
T  876621 caccaagatgtatg 876634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 16292081 - 16292175
Alignment:
Q  58 attttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagag 151  Q
    |||||||| ||||| || ||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||| | |  |||||||||||||||    
T  16292081 attttcccataacattaggattgcatcaagggtcaaccctaagtccttatctttttactttagttttggatgtattgacggaacacatccaagag 16292175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 441
Target Start/End: Complemental strand, 24584314 - 24584116
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||| ||||||  |||||||| ||| ||| || ||||||||  ||||||| ||||  || ||||| ||| |||||||||||||||       
T  24584314 ttccgcttgagtagaaacaagacggagtatatggaatgtaacttcagcaaaaggagaattatgtctaccttggaggtgaaagttggagatcatatcagac 24584215  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| |||||||||| || |||| |||||||||||| | ||| || |||  ||||| ||||||  |||||||| |||||    
T  24584214 cgcaagttacacggtttaaatatcttgggtccatagtacaaaatgatggagaaatataggcagatttaagccatcatattcaagctgggtggtggaaat 24584116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 38453256 - 38453130
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| |||||| ||||||||||| ||||||| | ||| |||| || ||||||||||||||| || |||  |    
T  38453256 gaggtgaaagttggagatcatatcataccccaagttacacgatttaaatatcttgggtccttcatacaaaatgacggagaaatagaagcatatgtaagcc 38453157  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||| ||||||  ||||||||||||||    
T  38453156 atcatattcaagctgggtggttgaaat 38453130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 13148741 - 13148822
Alignment:
Q  108 tttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagt 189  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||   |||||||||  ||||| | ||||||||||    
T  13148741 tttttactttagttttggatgtacttacagaacacatccaagagctagcactaagatgtatgcattttgtagatgatgcagt 13148822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 243 - 440
Target Start/End: Complemental strand, 41763757 - 41763560
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||| || ||||||||  ||| |   ||||  || ||||| ||| |||||||| |||||||      
T  41763757 ttccgcctgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagattatatcatac 41763658  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaa 440  Q
    | ||| || ||| ||||||||||| |||||||||| || |||| |  ||||||||||||||| || ||| |||||  ||||||  |||||||||||||    
T  41763657 cccaagttgcacgatttaaatatcttgggtccatagtacaaaatgtcggagaaatagaagcagatgtaaatcatcgtattcaagctgggtggttgaaa 41763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 252 - 416
Target Start/End: Complemental strand, 7789238 - 7789074
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||| |||||||||| |||||||||||| |||||| || |||||| ||| ||||| || |||||| || ||  || |||||||||| ||  || || |||    
T  7789238 agtaaaagcaagacaaagtatatgaaatgtaatttcagtaaaagatgaagtatttatactttagatgtgaaggtttgagatcatatgataccataagtta 7789139  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcat 416  Q
    | || |||||||||||||||| ||||||| ||||  |  |||||||| ||||| |||||| ||||    
T  7789138 cgcattttaaatatcatgggttcataatacaaaataacagagaaatataagcatatataaatcat 7789074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 438
Target Start/End: Original strand, 37281680 - 37281878
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataat--tttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatca 339  Q
    ||||||| | ||||||||||||||| |||||||||||| || |  || | |||||||| || || |||||  || ||||| ||| || |||||||| |||    
T  37281680 cttccgcttgagtagaagcaagacaaagtatatgaaatgtagtacttcaacaaaagacaaagtagttctaccttggaggtgaaagtttgagatcatgtca 37281779  T
Q  340 tttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttga 438  Q
    |  | ||| ||||||| |||||||||| | | |||||| ||||||| || ||||||||||||| | || ||| |||||  ||||||  |||||||||||    
T  37281780 taccccaagttacacattttaaatatcttagctccatagtataaaatgaaggagaaatagaagtagatgtaaatcatcctattcaagttgggtggttga 37281878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 2610102 - 2610300
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||  |||||||||||| ||| || |||| |||  ||| ||  ||||  || ||||| ||| ||||||||||||||||      
T  2610102 ttccgcttgagtagaagcaagacggagtatatgaaatgtaacttcagcagaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatac 2610201  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| ||||||| |  || |||| ||  |||||||||||||| || |||  ||||| ||||||  ||||||||||||||    
T  2610202 cccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacagagaaatagaagcagatgtaaaccatcatattcaagctgggtggttgaaat 2610300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 190
Target Start/End: Complemental strand, 12475296 - 12475202
Alignment:
Q  96 taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||| | ||||||||| ||||||||||||||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  12475296 taagtccttttctttttactttagttttggatgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 12475202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14769676 - 14769785
Alignment:
Q  68 aacaatatgattgcatcaaggatcaacc-taagtcca-tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatg 165  Q
    ||||||||||||||| ||||| |||||| |||| ||  ||||||||||| ||| ||||||||||||||| |  |||||| |||||||||||| | | |||    
T  14769676 aacaatatgattgcaccaagggtcaaccctaagccctgtatctttttactttaattttggatgtacttacatcacacattcaagagctagcaccaatatg 14769775  T
Q  166 tatgtttttt 175  Q
    ||||||||||    
T  14769776 tatgtttttt 14769785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 285 - 365
Target Start/End: Original strand, 12904584 - 12904664
Alignment:
Q  285 tttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatat 365  Q
    ||||||||||| ||||   |||||| |||||||||| ||||||||||||||||||| |||||| ||||||  |||||||||    
T  12904584 tttagcaaaaggcgaaacgtttctagtttagaggtacaaattggagatcatatcatatcacaagttacacggtttaaatat 12904664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 4807238 - 4807364
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||| |||||||||| ||||||  |  || |||| || ||||||||||||||| || |||  |    
T  4807238 gaggtgaaagttggagatcatatcataccccaagttacacagtttaaatatcttgggtctttcgtacaaaatgacggagaaatagaagcagatgtaagcc 4807337  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  |||||| |||||||||||||||    
T  4807338 atcgtattcaagatgggtggttgaaat 4807364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 7135533 - 7135445
Alignment:
Q  109 ttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttg 197  Q
    |||||| ||| |||||||||||||||   |||||| |||||||||| ||| ||||||||||  ||||| |||||||| |||||| ||||    
T  7135533 ttttactttaattttggatgtacttaccaaacacaaccaagagctaccattgagatgtatgcattttgcaaatgatgtagtcctgcttg 7135445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 14769884 - 14769940
Alignment:
Q  254 tagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctat 310  Q
    ||||||||||||| |||||||| ||| |||||||||| |||| ||||||||||||||    
T  14769884 tagaagcaagacagagtatatggaatgtaattttagctaaaggcgaattatttctat 14769940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 13593223 - 13593172
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||||| ||||||||||||||||||||| |||||||| || ||||||    
T  13593223 tatctttttacattagttttggatgtacttataaaacacatctaatagctag 13593172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 252 - 441
Target Start/End: Original strand, 8180363 - 8180552
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    ||||||||||||||| |||||||| ||| |||||| ||   |||  ||| ||  ||||  || ||||| ||| ||||||||||||||||    ||| |||    
T  8180363 agtagaagcaagacagagtatatggaatgtaatttcagtggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatactccaagtta 8180462  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    |||  |||||||||  ||||||| |  ||||||| || ||||||||||||||| || |||  ||||  ||||||  ||||||||||||||    
T  8180463 cacggtttaaatattttgggtccttcttataaaatgacggagaaatagaagcagatgtaagccatcgtattcaagctgggtggttgaaat 8180552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 325 - 441
Target Start/End: Complemental strand, 452248 - 452132
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattca 424  Q
    ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  ||||  |||||    
T  452248 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattca 452149  T
Q  425 atatgggtggttgaaat 441  Q
    |  ||||||||||||||    
T  452148 agctgggtggttgaaat 452132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 365
Target Start/End: Original strand, 23866267 - 23866351
Alignment:
Q  281 taattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatat 365  Q
    |||||||| |||||| | || || |||||  ||||| || ||| || |||||||||||||  |||||||||||||||||||||||    
T  23866267 taattttaacaaaaggcaaagtagttctaacttagatgtgaaagttagagatcatatcataccacaaattacacaatttaaatat 23866351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 148
Target Start/End: Complemental strand, 33595126 - 33595091
Alignment:
Q  113 accttagttttggatgtacttatagaacacatccaa 148  Q
    |||||||||||||||||||||||| |||||||||||    
T  33595126 accttagttttggatgtacttataaaacacatccaa 33595091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 13148959 - 13149085
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  ||||||||||   |||||||| || |||| || ||||||||||||| | ||| || ||    
T  13148959 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatctcaggtccatagtacaaaatgacggagaaatagaagtagatacaaatc 13149058  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||| ||||||||||    
T  13149059 atcgtattcaagttggatggttgaaat 13149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 34502164 - 34502106
Alignment:
Q  120 ttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaa 178  Q
    |||||||||||| ||   ||||||| |||||||||||| | ||||||||||||||||||    
T  34502164 ttttggatgtacctacgaaacacatgcaagagctagcaccaagatgtatgttttttgaa 34502106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 138 - 200
Target Start/End: Original strand, 36038669 - 36038731
Alignment:
Q  138 aacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    |||||||||||||| | ||||  |||||||||||||||||| ||||||  ||||| |||||||    
T  36038669 aacacatccaagagtttgcatgaagatgtatgttttttgaagatgatgttgtcctgcttggag 36038731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 7789411 - 7789347
Alignment:
Q  111 ttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||| ||||||||| |||||| || | || ||| ||||||||| ||||||||||||||| |||||    
T  7789411 ttactttagttttgaatgtacctagaaaatacaaccaagagctggcatcgagatgtatgattttt 7789347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 340
Target Start/End: Complemental strand, 13593047 - 13592959
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    |||||||||||||||| |||| || ||| ||| || | ||||||||||| || ||| |  |||||||| ||| ||| ||||||||||||    
T  13593047 agtagaagcaagacatggtatgtgtaatgtaacttcaacaaaagacgaagtagttcaaacttagaggtgaaagttgaagatcatatcat 13592959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 30 - 190
Target Start/End: Original strand, 39707803 - 39707963
Alignment:
Q  30 gtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatg 128  Q
    ||||||||||| |||| | | ||||| ||||||||| |||||||| |||||||  |||| | |||| ||||||| ||||||||||| |||||||||||||    
T  39707803 gtgaggacgcatgatgggct-accaaagattttcccataacaataggattgcactaagggttaaccctaagtccttatctttttactttagttttggatg 39707901  T
Q  129 tacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||| |||||||||||||||| | ||| ||| |||||||||||||| | |||||| ||||    
T  39707902 tacttacagaacacatccaagagtttgcaccgatatgtatgttttttgcagatgatgtagtc 39707963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 1212221 - 1212088
Alignment:
Q  58 attttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagc 156  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||||||| |||||||| || ||||||||||||||||||| | |||||||| ||||| ||||    
T  1212221 attttcccataacaataggattgcaccaaggttcaaccctaagtccttatcttttcactttagttttggatgtacttacataacacatctaagagttagc 1212122  T
Q  157 atcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    | ||||||||||| |||||| | |||||| ||||    
T  1212121 accgagatgtatgctttttggagatgatgtagtc 1212088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 242 - 395
Target Start/End: Complemental strand, 10776128 - 10775975
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatt 341  Q
    ||||||||| || ||||||| |||||| |||||| ||| ||||||||||||||| |||| | |||||| ||||||||  ||| ||||||||||||||||     
T  10776128 cttccgcctgagcagaagcacgacatactatatggaatgtaattttagcaaaaggcgaaatgtttctagtttagaggggaaagttggagatcatatcata 10776029  T
Q  342 tcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaa 395  Q
     ||||| |||||   |||||||||| |||||| |||||| |||| |||||||||    
T  10776028 ccacaagttacatggtttaaatatcttgggtctataatacaaaatgatggagaa 10775975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 23907246 - 23907097
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||||   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  23907246 gtgtgaggacgcaggatgagactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 23907147  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    |||| | |  ||||||| ||||||| ||||| ||||||||||| ||||||    
T  23907146 tgtattgacggaacacaaccaagagttagcaccgagatgtatgctttttg 23907097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 176
Target Start/End: Original strand, 435570 - 435719
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| || |||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  435570 gtgtgaggacgcaagatgggactaccgaagattttcccataacaataggagtgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 435669  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| ||||||    
T  435670 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttg 435719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 1777967 - 1777796
Alignment:
Q  20 ttcaactggtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttacctta 118  Q
    ||||||| ||||||||||| | |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||| ||| |||||||| || |||    
T  1777967 ttcaactagtgtgaggacgtaggatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaaatccttatcttttaacttta 1777868  T
Q  119 gttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||||||||| | |  ||||||||||||||| ||||| ||||||||||| ||| || | |||||| ||||    
T  1777867 gttttggatgtattgacggaacacatccaagagttagcaccgagatgtatgctttatgcagatgatgtagtc 1777796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 104 - 200
Target Start/End: Complemental strand, 17666892 - 17666796
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| | |||||| |||||||||||  ||||||| |||||| |||| || ||||||    
T  17666892 tatctttttacattagttttggatgtacttacataacacatccaacaactagcaccgagatgtatgcattttgaatatgatgtagtcttaattggag 17666796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 42037327 - 42037414
Alignment:
Q  108 tttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctact 195  Q
    |||| |||||||||||||||||||||| | ||||||||||||||| |||| |||||||||| ||||||| | |||||  |||||||||    
T  42037327 ttttcaccttagttttggatgtacttagaaaacacatccaagagcgagcaccgagatgtattttttttgcagatgatatagtcctact 42037414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 27450809 - 27450683
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||| |||| ||||| |||||||||| |  |||| |||||||||||||||||| || ||| ||    
T  27450809 gaggtgaaagttggagatcatatcataccccaagttacacagtttacatatcttgggtccatagtgcaaaatgatggagaaatagaagcagatgtaaatc 27450710  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  27450709 atcgtattcaagctgggtggttgaaat 27450683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 48623442 - 48623308
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||| | || ||||| ||||||| ||||| |||||| ||||| | ||||||||||| ||||||||||||||| | |   |||||||||||||| |||    
T  48623442 gattttctcttatcaataggattgcaccaaggttcaaccctaagttcttatctttttactttagttttggatgtattgacgtaacacatccaagagttag 48623343  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||| ||||    
T  48623342 caccgagatgtatgctttttgcagatgatgtagtc 48623308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 53703977 - 53704051
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgta 130  Q
    |||||||||||||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||||||    
T  53703977 gattttcccgtaacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttggatgta 53704051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 255 - 366
Target Start/End: Original strand, 33369356 - 33369464
Alignment:
Q  255 agaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacac 354  Q
    |||||||| | | |||||||||||| |||||||||   |||||||| ||||| ||||||||| |||||| || |||||||||||||  |||||||||||     
T  33369356 agaagcaaaatagagtatatgaaatgtaattttag---aagacgaaatatttttattttagatgtaaaagttagagatcatatcataccacaaattacat 33369452  T
Q  355 aatttaaatatc 366  Q
     |||||||||||    
T  33369453 gatttaaatatc 33369464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 252 - 441
Target Start/End: Original strand, 41427422 - 41427610
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||||||||||| ||||||||||| |||||| ||||||| ||||| || |||||  ||| | || ||||||| ||||||||||||  | ||| |||    
T  41427422 agtagaagcaagacatggtatatgaaatgtaatttcagcaaaaaacgaagtagttctaccttaaaagtgaaaattgaagatcatatcataccccaagtta 41427521  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    ||| | ||||||||| || |  |||| || | || || ||||||||| |||||| || ||  ||||| ||||||  ||||||||||||||    
T  41427522 cacgacttaaatatcttgtgctcatagtacagaatgacggagaaatataagcaagtacaa-acatcacattcaagttgggtggttgaaat 41427610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 27451088 - 27450968
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| ||||||||  | |||| ||||| |||||| ||||||| | ||||||||| ||||||||||||||||| |   |||||||||||||| ||     
T  27451088 gattttcccataacaatagaactgcaccaagggtcaaccctaagtccttctctttttactttagttttggatgtactaacgaaacacatccaagagttaa 27450989  T
Q  156 catcgagatgtatgttttttg 176  Q
    || ||||||||||| ||||||    
T  27450988 caccgagatgtatgctttttg 27450968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 243 - 441
Target Start/End: Complemental strand, 31960522 - 31960324
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||| |||||||| ||| ||| || |||  |||  ||| ||  ||||  || ||||| ||| ||||||||||||||||      
T  31960522 ttccgcttgagtagaagcaagacagagtatatggaatgtaacttcagcggaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcatac 31960423  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  ||||| ||||||  ||||||||||||||    
T  31960422 cccaatttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattcaagctgggtggttgaaat 31960324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 426
Target Start/End: Original strand, 20917554 - 20917739
Alignment:
Q  241 acttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    |||||||| |||||||||| ||||||||||||||| |||||| ||| ||| |||   | | || || ||| |||  ||| ||| ||| ||||||||||||    
T  20917554 acttccgcttaagtagaagtaagacatagtatatggaatatagtttcagcgaaatgtgtagtagttttatcttaagggtgaaagttgaagatcatatcat 20917653  T
Q  341 ttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaat 426  Q
      || || ||||||| ||||||||||   | |||||| |||||||| | |||||||||||| || || ||| ||||| ||||||||    
T  20917654 accataagttacacagtttaaatatccgagctccatagtataaaacaacggagaaatagaaacatatgtaagtcatcgaattcaat 20917739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 247 - 404
Target Start/End: Original strand, 39708035 - 39708192
Alignment:
Q  247 gcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcaca 346  Q
    |||| ||||||||||||||  |||||||| ||||||| || ||||||||  ||||||  ||||| || ||||| ||| ||||||||||||| ||  | ||    
T  39708035 gcctgagtagaagcaagacggagtatatggaatataacttcagcaaaaggagaattaggtctatcttggaggtgaaatttggagatcatattatacctca 39708134  T
Q  347 aattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 404  Q
    | |||  |  |||||||||| |||||| ||| || |||| || |||||||||||||||    
T  39708135 agttatgcggtttaaatatcttgggtcgatagtacaaaatgacggagaaatagaagca 39708192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 266 - 407
Target Start/End: Complemental strand, 47265889 - 47265748
Alignment:
Q  266 atagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatat 365  Q
    |||||||||||||| ||| || ||||||||  ||| ||  ||||  || ||||| ||| |||||| |||||||||  | ||| ||||| | |||||||||    
T  47265889 atagtatatgaaatgtaacttcagcaaaaggagaagtaggtctaccttggaggtgaaagttggaggtcatatcataccccaagttacatagtttaaatat 47265790  T
Q  366 catgggtccataatataaaacgatggagaaatagaagcaaat 407  Q
    | ||| |||||| ||||||| || ||||||||||||||||||    
T  47265789 cttggatccatagtataaaatgacggagaaatagaagcaaat 47265748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 435875 - 436001
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  ||||||| || ||||||||||||||| || ||| ||    
T  435875 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtataaaatgacggagaaatagaagcagatgtaagtc 435974  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  || |||||||||||    
T  435975 atcgtattcaagctgagtggttgaaat 436001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 441
Target Start/End: Original strand, 3273096 - 3273194
Alignment:
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    ||||| |||||||||||||| ||| | |||||||| || |||||||   ||||||||||||||||||||  |||| |||||||  ||| ||||||||||    
T  3273096 cacaagttacacaatttaaacatcttaggtccatagtacaaaacgacaaagaaatagaagcaaatataaaccatcgaattcaagttggatggttgaaat 3273194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 200
Target Start/End: Complemental strand, 10776336 - 10776190
Alignment:
Q  55 acgattttcccgtaacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagct 153  Q
    ||||||||||| | |||||| ||||||| ||||| ||||| | ||| || |||||||| |  |||||||||||||||||||  |||||||| |||||||     
T  10776336 acgattttcccatgacaataggattgcaccaaggttcaacaccaagcccttatcttttcattttagttttggatgtacttacggaacacattcaagagcg 10776237  T
Q  154 agcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
      || | ||||||||| |||||| | |||||  |||||||| |||||    
T  10776236 gacaccaagatgtatgctttttgcagatgatatagtcctacatggag 10776190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 339
Target Start/End: Original strand, 25867163 - 25867261
Alignment:
Q  241 acttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatca 339  Q
    ||||||||||||| ||||||||||||||  ||||||||| ||||||||| ||||| ||||   || ||| ||||||||| ||| ||  |||||||||||    
T  25867163 acttccgcctaagcagaagcaagacataacatatgaaatgtaattttaggaaaaggcgaagcgttactagtttagaggtgaaagttcaagatcatatca 25867261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 33226855 - 33226981
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  33226855 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 33226954  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||| ||||||  ||||||||||||||    
T  33226955 atcatattcaagctgggtggttgaaat 33226981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 48623163 - 48623037
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||| ||||||||  | |||||||||| ||||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  48623163 gaggtgaaagttggagagcatatcataccccaaattacacgatttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 48623064  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  48623063 atcgtattcaagctgggtggttgaaat 48623037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 441
Target Start/End: Original strand, 1629090 - 1629203
Alignment:
Q  328 gagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaata 427  Q
    ||||||||||| |  ||||| ||||| | |||||||||| ||  | |||| |||||||||||||||||||||||||| || ||| |||||  ||||||      
T  1629090 gagatcatatcgtgccacaagttacatagtttaaatatcttgaattcatagtataaaacgatggagaaatagaagcagatgtaaatcatcgtattcaact 1629189  T
Q  428 tgggtggttgaaat 441  Q
    || |||||||||||    
T  1629190 tgagtggttgaaat 1629203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 76 - 176
Target Start/End: Original strand, 3272815 - 3272916
Alignment:
Q  76 gattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttt 174  Q
    ||||||| |||||||||||| ||||||  ||| ||||||| |||||||||||| || |||||||||  ||| ||| | |||||| |||||||||| ||||    
T  3272815 gattgcaccaaggatcaaccctaagtctttatatttttacattagttttggatctatttatagaacgaatctaagcgttagcattgagatgtatgctttt 3272914  T
Q  175 tg 176  Q
    ||    
T  3272915 tg 3272916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 16002350 - 16002401
Alignment:
Q  125 gatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    ||||||||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  16002350 gatgtacttacggaacacatccaagagttagcaccgagatgtatgttttttg 16002401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 311 - 402
Target Start/End: Complemental strand, 39755011 - 39754920
Alignment:
Q  311 tttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaag 402  Q
    ||||||||| ||| ||| ||||||||||||  ||||| | ||||| ||||||||||||||||| ||| || |||||||   |||||||||||    
T  39755011 tttagaggtgaaagttgaagatcatatcataccacaagtcacacactttaaatatcatgggtctatagtacaaaacgacaaagaaatagaag 39754920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 315 - 442
Target Start/End: Original strand, 56374936 - 56375063
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||| ||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| ||||||  |    
T  56374936 gaggtgaaagttggagagcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatataagcc 56375035  T
Q  415 atcaaattcaatatgggtggttgaaatt 442  Q
    |||  ||||||  |||||||||||||||    
T  56375036 atcgtattcaagctgggtggttgaaatt 56375063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 1777651 - 1777525
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||| ||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| ||  ||||||||||||||||| ||| ||    
T  1777651 gaggtgaaagttggaaatcatatcataccccaagttacacgttttaaatatcttgggtccttcgtacaaaatgacagagaaatagaagcaaatgtaagtc 1777552  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  1777551 atcgtattcaagctgggtggttgaaat 1777525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 17668190 - 17668104
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||||| || ||||||| ||||||||   ||||||||||| | |||||| | |||||||||| ||||||| |||||| ||||    
T  17668190 tatctttttacatttgttttgggtgtacttacgaaacacatccaacaactagcaccaagatgtatgtgttttgaagatgatgtagtc 17668104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 23906937 - 23906811
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  23906937 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 23906838  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  23906837 atcgtattcaagctgggtggttgaaat 23906811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 35556173 - 35556092
Alignment:
Q  118 agttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    ||||||||||||||||| ||||||| ||||||||| |||| | | ||||||| |||||| | |||||  ||||||||||||||    
T  35556173 agttttggatgtacttacagaacacctccaagagcgagca-ccaaatgtatgctttttgtagatgatatagtcctacttggag 35556092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 55769244 - 55769198
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaaga 150  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  55769244 tatctttttactttagttttggatgtatttatggaacacatccaaga 55769198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 95 - 200
Target Start/End: Original strand, 15183461 - 15183566
Alignment:
Q  95 ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctac 194  Q
    ||||| || |||||||| || ||||||||||||||| ||| | || |||||||||||| |||| | | || ||||||||||| | |||||  ||||| ||    
T  15183461 ctaagcccttatcttttcactttagttttggatgtatttacataatacatccaagagcgagcaccaatatatatgttttttgcatatgatatagtccaac 15183560  T
Q  195 ttggag 200  Q
    ||||||    
T  15183561 ttggag 15183566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 417
Target Start/End: Complemental strand, 17666732 - 17666572
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    |||||||||||||||   |||||| |||  ||||| | |||||| |||| ||||||||| |||||||| ||  || |||||||||||||   |||| |||    
T  17666732 agtagaagcaagacaa--tatatgtaatgcaatttcatcaaaaggcgaagtatttctatcttagaggtgaacgttagagatcatatcat---acaagtta 17666638  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatc 417  Q
    |||| |||||||||| ||||| || | || |||| |  | ||||||| |||||||| ||| |||||    
T  17666637 cacagtttaaatatcttgggttcaaagtacaaaatgtcgaagaaataaaagcaaatgtaaatcatc 17666572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 21060188 - 21060260
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    |||| |||||| ||||||||||||||||||| | |||||||||||||| || | || | |||||||| |||||    
T  21060188 tatccttttactttagttttggatgtacttacataacacatccaagagataacttccaaatgtatgtattttg 21060260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 20917413 - 20917471
Alignment:
Q  96 taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagcta 154  Q
    |||||||||||||||||| | || |||||||| || |||| |||||||||||| |||||    
T  20917413 taagtccatatctttttatcctaattttggatttatttatggaacacatccaaaagcta 20917471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 53707241 - 53707295
Alignment:
Q  136 agaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  53707241 agaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 53707295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 55833500 - 55833454
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaaga 150  Q
    ||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  55833500 tatctttttactttagttttggatgtgtttatggaacacatccaaga 55833454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 56374737 - 56374791
Alignment:
Q  136 agaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  56374737 agaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 56374791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 25597997 - 25597933
Alignment:
Q  312 ttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccat 376  Q
    ||||||| |||||||||||||||||  ||  ||||| | |||||| ||||||||| |||||||||    
T  25597997 ttagaggcaaaaattggagatcatactataccacaagtcacacaacttaaatatcttgggtccat 25597933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 55769086 - 55769034
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaa 294  Q
    ||||||||||||||||| ||| | | ||||||| |||| ||||||||||||||    
T  55769086 cttccgcctaagtagaaacaataaagagtatataaaatgtaattttagcaaaa 55769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 55833342 - 55833290
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaa 294  Q
    ||||||||||||||||| ||| | | ||||||| |||| ||||||||||||||    
T  55833342 cttccgcctaagtagaaacaataaagagtatataaaatgtaattttagcaaaa 55833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 6082738 - 6082901
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||||   ||| | ||||||| |||||||||| ||||||| ||||| |||||| ||||| | ||||||||||| |||||||||||    
T  6082738 gtgtgaggacgcaagatgagactaccgaagattttctcgtaacaataggattgcaccaagggtcaaccctaagttcttatctttttactttagttttgga 6082837  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  6082838 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 6082901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 28 - 175
Target Start/End: Original strand, 9706113 - 9706261
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacct-aagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||||||  |||   ||||||||| ||||||||||| |||| ||||| ||||||| |||||| ||||||||||| |||||||||||    
T  9706113 gtgtgaggacgcaggatgaggataccgtagattttcccataacaatatgactgcaccaagggtcaaccttaagtccttatctttttactttagttttgga 9706212  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    |||||| |   |||||||||||||| ||||| |||| |||||| |||||    
T  9706213 tgtactgacgaaacacatccaagagttagcaccgagttgtatgcttttt 9706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 30670226 - 30670389
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||| ||| |||||||| ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||| ||| | ||||||||| ||||||||||     
T  30670226 gtgtgaggatgcatgatgaggttacctaagattttcccataacaataagattgcaccaagggtcaaccataaatccttgtctttttactttagttttggg 30670325  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||| |  ||| ||||||||||| |||||| |||||||||| |||||| | |||||| ||||    
T  30670326 tgtactgacggaatacatccaagagttagcattgagatgtatgctttttgcagatgatgtagtc 30670389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 2208323 - 2208206
Alignment:
Q  51 accaacgattttcccgtaacaatatgattgcatcaaggatcaa-cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaag 149  Q
    |||||||||||| || || ||||||||||||| ||||| |||| |||||| || || |||||||| |||||||||||||||||||  |||||||||||||    
T  2208323 accaacgatttttccatatcaatatgattgcaccaagggtcaatcctaagcccttacctttttactttagttttggatgtacttacggaacacatccaag 2208224  T
Q  150 agctagcatcgagatgta 167  Q
    || ||||| | |||||||    
T  2208223 agttagcaccaagatgta 2208206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 60 - 190
Target Start/End: Complemental strand, 5259063 - 5258931
Alignment:
Q  60 tttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatcttttt-accttagttttggatgtacttatagaacacatccaagagctagca 157  Q
    |||||| |||||||| ||||||| ||||| | |||| ||||||| ||||||||| || ||||||||||||||||| |  ||||||||||||||| |||||    
T  5259063 tttcccataacaataggattgcaccaagggtaaaccctaagtccttatcttttttactttagttttggatgtactgacggaacacatccaagagttagca 5258964  T
Q  158 tcgagatgtatgttttttgaaaatgatgcagtc 190  Q
     ||||||||||| |||||| | |||||| ||||    
T  5258963 ccgagatgtatgctttttgcagatgatgaagtc 5258931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 3629568 - 3629691
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacct-aagtccatatctttttaccttagttttgga 126  Q
    ||||||| ||||| |||  ||| ||| ||||||||||| |||||||| |||||||  |||| ||||||| ||| || ||||||||||| |||||||||||    
T  3629568 gtgtgagaacgcaagatagggttaccgacgattttcccataacaataggattgcactaagggtcaaccttaagcccttatctttttactttagttttgga 3629667  T
Q  127 tgtacttatagaacacatccaaga 150  Q
    ||||||||| |||||||| |||||    
T  3629668 tgtacttatggaacacattcaaga 3629691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 242 - 441
Target Start/End: Complemental strand, 5258859 - 5258660
Alignment:
Q  242 cttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatt 341  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||| || ||||||||  ||| |   ||||  || || || ||| ||||||||||||||||     
T  5258859 cttccgcctgagtagaagcaagacaaagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaagtgaaagttggagatcatatcata 5258760  T
Q  342 tcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
     | ||| ||||||| |||||||||| |||||||||| || |||| || ||||||||||||||  || ||  |||||  ||||||  ||||||||||||||    
T  5258759 ccccaagttacacagtttaaatatcttgggtccatagtacaaaatgacggagaaatagaagctgatgtacatcatcgtattcaagctgggtggttgaaat 5258660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 243 - 437
Target Start/End: Complemental strand, 10100565 - 10100371
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||| ||||||||||   ||| ||  ||||  || ||||| ||| ||||||||||||||||      
T  10100565 ttccgcctgagtagaagcaagacggagtatatggaatgtaactttagcaaaatgagaagtaggtctaccttggaggtgaaagttggagatcatatcatac 10100466  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttg 437  Q
    | ||| ||||||  |||||||||| |||||||||| || |||| |  ||||||||||||||  |||||| |||||  ||||||  ||||||||||    
T  10100465 cccaagttacacggtttaaatatcttgggtccatagtacaaaatgtcggagaaatagaagctgatataaatcatcgtattcaagctgggtggttg 10100371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 5631224 - 5631304
Alignment:
Q  96 taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttg 176  Q
    ||||||| ||||||||||| ||||||||||||||||| |  ||||||||||||||| ||||| ||||||| ||||||||||    
T  5631224 taagtccttatctttttactttagttttggatgtactgacggaacacatccaagagttagcaccgagatgcatgttttttg 5631304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 20428551 - 20428418
Alignment:
Q  58 attttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagc 156  Q
    |||||||| |||||||| || |||| ||||| |||||| |||||   |||||| |||| |||| ||||||||||||||  |||||||| |||||| ||||    
T  20428551 attttcccataacaataggactgcaccaagggtcaaccctaagtttttatcttattactttagctttggatgtacttacggaacacattcaagagttagc 20428452  T
Q  157 atcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    | ||||||||||| |||||| | |||||| ||||    
T  20428451 accgagatgtatgctttttgcagatgatgtagtc 20428418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 9369274 - 9369171
Alignment:
Q  98 agtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtt-ttttgaaaatgatgcagtcctactt 196  Q
    ||||| |||||||| ||||||||||||||||||||||   ||||||||||| ||| |||| | ||||||||||| ||||| |||||||  |||| |||||    
T  9369274 agtccttatcttttcaccttagttttggatgtacttacgaaacacatccaaaagcgagcaccaagatgtatgtttttttgcaaatgatatagtcttactt 9369175  T
Q  197 ggag 200  Q
    ||||    
T  9369174 ggag 9369171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 2680926 - 2680853
Alignment:
Q  96 taagtccatatcttttt-accttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtat 168  Q
    ||||||| ||||||||| || ||||||||||||||||||| | |||||||||||| | ||||||||||||||||    
T  2680926 taagtccttatcttttttactttagttttggatgtacttacataacacatccaagtgttagcatcgagatgtat 2680853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 256 - 444
Target Start/End: Original strand, 7079728 - 7079909
Alignment:
Q  256 gaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacaca 355  Q
    ||||||| ||| ||||||||||||||||||| |  ||||| ||||  ||||||| |||| |||| || ||||||||||||| ||     ||| ||||| |    
T  7079728 gaagcaaaacaaagtatatgaaatataattt-attaaaag-cgaagcatttctaatttacaggtgaacattggagatcatacca-----caagttacaaa 7079820  T
Q  356 atttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaattaa 444  Q
    |||| |||||| | |||| ||| || |||||||||||||||| |||| |||| |||  ||| ||||||||  ||| |||||||||||||    
T  7079821 atttgaatatcttaggtctatagtacaaaacgatggagaaattgaaggaaatctaaaccataaaattcaagctggatggttgaaattaa 7079909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 9706432 - 9706548
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattca 424  Q
    ||||||||||||||||  | ||| ||||||  |||||||||| |||||||||  || |||| ||||||||||||||||||  | ||| |||||  |||||    
T  9706432 ttggagatcatatcataccccaagttacacggtttaaatatcttgggtccatggtacaaaatgatggagaaatagaagcaggtgtaaatcatcgtattca 9706531  T
Q  425 atatgggtggttgaaat 441  Q
    |  ||||||||||||||    
T  9706532 agctgggtggttgaaat 9706548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 256 - 441
Target Start/End: Complemental strand, 20428331 - 20428146
Alignment:
Q  256 gaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacaca 355  Q
    ||||||||||  |||||||| ||| ||| || ||||||||  ||||||  ||||  |  ||||| ||| ||||||||||||||||  ||||| |||| |     
T  20428331 gaagcaagacggagtatatggaatgtaacttcagcaaaaggagaattaggtctacctaggaggtgaaagttggagatcatatcataccacaagttacgcg 20428232  T
Q  356 atttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
     |||||||||  |||||||| | || ||||||| ||| ||||||||||| || ||| |||||  || |||  ||||||||||||||    
T  20428231 gtttaaatatattgggtccacagtacaaaacgacggaaaaatagaagcagatgtaaatcatcgtatccaagctgggtggttgaaat 20428146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 5631391 - 5631590
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||| |||||||| ||| ||| || ||||||||  ||| |   ||||  ||  |||| ||| || |||||||||||||      
T  5631391 ttccgcatgagtagaagcaagacaaagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttgcaggtgaaagttagagatcatatcatac 5631490  T
Q  343 cacaaattacacaatttaaatatcat-gggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||  | ||||||||| || |||| || ||||||||||||||| || ||| |||||  ||||||  ||||||||||||||    
T  5631491 cccaagttacacggtttaaatatttttgggtccatagtacaaaatgacggagaaatagaagcagatgtaaatcatcgtattcaagctgggtggttgaaat 5631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 33495629 - 33495708
Alignment:
Q  111 ttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| ||||||||| ||||||| |  ||||||||||||||  ||||||||||||||||| |||||| | |||||| ||||    
T  33495629 ttactttagttttgaatgtactgacggaacacatccaagatttagcatcgagatgtatgctttttgcatatgatgtagtc 33495708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 27790521 - 27790641
Alignment:
Q  55 acgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagct 153  Q
    ||||||||||| |||||| | ||||  | ||||| |||||| |||  || || |||||||| ||||||||| ||| ||||||  ||||||||||| || |    
T  27790521 acgattttcccataacaaaaggattataccaagggtcaaccctaaacccttacctttttactttagttttgaatgcacttatgaaacacatccaaaagtt 27790620  T
Q  154 agcatcgagatgtatgttttt 174  Q
    |||||| ||||||||| ||||    
T  27790621 agcatcaagatgtatgctttt 27790641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 377
Target Start/End: Original strand, 3632613 - 3632724
Alignment:
Q  266 atagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatat 365  Q
    |||||||||  |||||||||| |  |||| ||||| || |||||  || ||||| ||| ||||||||||||||||  |  ||||||||| ||||||||||    
T  3632613 atagtatattgaatataatttaacaaaaatacgaagtagttctacctttgaggtgaaagttggagatcatatcataccctaaattacacgatttaaatat 3632712  T
Q  366 catgggtccata 377  Q
    | ||| ||||||    
T  3632713 cttggatccata 3632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 2680748 - 2680706
Alignment:
Q  253 gtagaagcaagacatagtatatgaaatataattttagcaaaag 295  Q
    |||||||||||||| |||||||||||| |||||| ||||||||    
T  2680748 gtagaagcaagacagagtatatgaaatgtaatttcagcaaaag 2680706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 8811940 - 8811840
Alignment:
Q  344 acaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaatta 443  Q
    |||| ||||| |||||||||||| | |||| ||| || ||||||||||| |||| |||| |||| |||  ||| | ||||||  ||| ||||||||||||    
T  8811940 acaagttacaaaatttaaatatcttaggtctatagtacaaaacgatggataaattgaagaaaatctaaaccataagattcaagctggatggttgaaatta 8811841  T
Q  444 a 444  Q
    |    
T  8811840 a 8811840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 1e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 2076418 - 2076255
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| ||||||   ||| | |||||||||  ||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  2076418 gtgtgaggacgcatgatgagactaccgaagattttcccacaacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 2076319  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  2076318 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 2076255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 1274603 - 1274766
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| ||||||||  |||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  1274603 gtgtgaggacgcaggatgggactaccgaagattttcccataacaatagaattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 1274702  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  1274703 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 1274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 1288533 - 1288375
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||| ||||||| |||||||||||    
T  1288533 gtgtgaggacgcaggatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatatttttactttagttttgga 1288434  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatg 185  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | ||||||    
T  1288433 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatg 1288375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 3394078 - 3394212
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctag 155  Q
    ||||||||| |||||||| ||||||| ||||| | |||| ||||||| ||||| |||||  |||||||||||||||| |  ||||||||||||||| |||    
T  3394078 gattttcccataacaataggattgcaccaagggtaaaccctaagtccttatctctttactctagttttggatgtactgacggaacacatccaagagttag 3394177  T
Q  156 catcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    || ||||||||||| |||||| | |||||||||||    
T  3394178 caccgagatgtatgctttttgcagatgatgcagtc 3394212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 20318329 - 20318492
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||| |||||||| ||||||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  20318329 gtgtgaggacgcaggatgggactaccgaagattttcccataacaataggattgcaccaagggtcaaccctaagtccttatctttttactttagttttgga 20318428  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |   ||||||| |||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  20318429 tgtattgacgaaacacattcaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 20318492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 3394285 - 3394482
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||| |||||||| ||| |||||  ||||||||  ||| |   ||||  || ||||| ||| ||||||||||||||||      
T  3394285 ttccgcctgagtagaagcaagacagagtatatggaatgtaattc-agcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcatac 3394383  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| |||||||||| || |||| || ||||||||||||||| || ||| |||||  ||||||  ||||||||||||||    
T  3394384 cccaagttacacggtttaaatatcttgggtccatagtacaaaatgacggagaaatagaagcagatgtaaatcatcgtattcaagctgggtggttgaaat 3394482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 27296 - 27417
Alignment:
Q  55 acgattttcccgtaacaatatgattgcatcaaggatcaacctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagcta 154  Q
    |||||||||||||||||||| |||||||  |||||||||||||||  | || |||||||  || |||||||||||||||   || || ||||||||| ||    
T  27296 acgattttcccgtaacaataggattgcacgaaggatcaacctaagctcttacctttttatttttgttttggatgtacttgcggaccatatccaagagtta 27395  T
Q  155 gcatcgagatgtatgttttttg 176  Q
    ||| ||||||||||||||||||    
T  27396 gcaacgagatgtatgttttttg 27417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 12493276 - 12493148
Alignment:
Q  58 attttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagc 156  Q
    |||||||| |||||||| ||||||| ||||| |||||| ||| ||| ||||||||||| ||||||||||||||| | |  ||||||||||||||| ||||    
T  12493276 attttcccataacaataggattgcaccaagggtcaaccctaactccttatctttttactttagttttggatgtattgacggaacacatccaagagttagc 12493177  T
Q  157 atcgagatgtatgttttttgaaaatgatg 185  Q
    | | ||||||||| |||||| | ||||||    
T  12493176 accaagatgtatgctttttgcagatgatg 12493148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 24177862 - 24178025
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | ||||||||  |||||||| ||||||| ||||| |||||| |||||||  |||||||||| ||||||| |||    
T  24177862 gtgtgaggacgcaggatgggactaccgaagattttccgataacaataggattgcaccaagggtcaaccctaagtcctaatctttttactttagtttggga 24177961  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  24177962 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 24178025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 3301254 - 3301347
Alignment:
Q  94 cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgca 187  Q
    ||||||||| ||||| |||||  |||||||||||||||| | |||||||||||||||| ||||| ||||||||||| |||||| | ||||||||    
T  3301254 cctaagtccttatctctttactctagttttggatgtactgacagaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgca 3301347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 10638703 - 10638799
Alignment:
Q  94 cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||| ||||||||||| ||||||||||||||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  10638703 cctaagtccttatctttttactttagttttggatgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 10638799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 3301423 - 3301621
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||||| ||||||||||||||  |||||||| ||| ||| || ||||||||  ||| |   ||||  || ||||| ||| ||||||||||||||||      
T  3301423 ttccgcctgagtagaagcaagacggagtatatggaatgtaacttcagcaaaaggagaagtgggtctaccttggaggtgaaagttggagatcatatcatac 3301522  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| |||||||||| ||  ||| || ||||||||||||||| ||  || |||||  ||||||  ||||||||||||||    
T  3301523 cccaagttacacggtttaaatatcttgggtccatagtaccaaatgaaggagaaatagaagcagatgcaaatcatcgtattcaagctgggtggttgaaat 3301621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 107 - 425
Target Start/End: Complemental strand, 43558670 - 43558340
Alignment:
Q  107 ctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggagcattga 206  Q
    ||||| || |||||||||||||||||||  |||||||||||||||||| || |||||| ||||  ||||| | |||||| |||||| |||||||  ||||    
T  43558670 cttttcactttagttttggatgtacttacggaacacatccaagagctaacaccgagatatatgcgttttgtagatgatgtagtccttcttggagagttga 43558571  T
Q  207 ------------ataggaggttggagataaaccttaaaaacacacaacttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaa 294  Q
                || ||| |||||||| |||||||| || |  |  |||| || |  |||| |||||||| | |||||||| ||| ||  ||||||||||    
T  43558570 gggaggaatttaatgggatgttggagacaaaccttagaagcgtatgactttcgtcggagtacaagcaagataaagtatatggaatgtagatttagcaaaa 43558471  T
Q  295 gacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggaga 394  Q
    | | || | ||||||  | |||||| ||| |||||||||||| |||  ||||| |||||| ||||||||||| | |||||||  || ||||| |  ||||    
T  43558470 ggcaaagtgtttctagctcagaggtgaaagttggagatcatagcataccacaagttacacgatttaaatatcttaggtccattgtacaaaaccacagaga 43558371  T
Q  395 aatagaagcaaatataattcatcaaattcaa 425  Q
    |||||||||| || ||| ||||| |||||||    
T  43558370 aatagaagcagatgtaaatcatcgaattcaa 43558340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 243 - 441
Target Start/End: Original strand, 20318565 - 20318763
Alignment:
Q  243 ttccgcctaagtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcattt 342  Q
    |||||| | ||||||||||||||  |||||||| ||| ||| || |||  |||  ||| || |||||  || ||||| ||| ||||||||||||||||      
T  20318565 ttccgcttgagtagaagcaagacggagtatatggaatgtaacttcagcggaaggagaagtagttctaccttggaggtgaaagttggagatcatatcatac 20318664  T
Q  343 cacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  ||||| ||||||  ||||||||||||||    
T  20318665 cccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattcaagctgggtggttgaaat 20318763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 377
Target Start/End: Original strand, 25937662 - 25937780
Alignment:
Q  260 caagacatagtatatgaaatataattttagcaaaagacgaattatttctattttaga-ggtaaaaattggagatcatatcatttcacaaattacacaatt 358  Q
    ||||||| ||||||||||   |||||| ||||||||  ||| ||||||||  ||| | ||| ||| ||||||||||||||||| | |||||||||||| |    
T  25937662 caagacaaagtatatgaagagtaatttcagcaaaaggagaagtatttctaccttaaaaggtgaaagttggagatcatatcattccccaaattacacaaat 25937761  T
Q  359 taaatatcatgggtccata 377  Q
    |||||||| ||||||||||    
T  25937762 taaatatcttgggtccata 25937780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 28977724 - 28977638
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    ||||||||||| ||||||||||||||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  28977724 tatctttttactttagttttggatgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 28977638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 398
Target Start/End: Complemental strand, 6368623 - 6368478
Alignment:
Q  253 gtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattac 352  Q
    ||||||||||||||  ||||||| | | |||||||||||| ||  |||  ||||||| | ||||||| |||  ||||||||||| |||  ||||| ||||    
T  6368623 gtagaagcaagacaaggtatatggattgtaattttagcaagaggtgaaacatttctaatgtagaggtgaaagatggagatcataacataccacaagttac 6368524  T
Q  353 acaatttaaatatcatgggtccataatataaaacgatggagaaata 398  Q
    |||||||||||||| ||  || ||| || ||||||| |||||||||    
T  6368523 acaatttaaatatcttgtatctatagtacaaaacgacggagaaata 6368478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 12493023 - 12492897
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||||||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  12493023 gaggtaaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 12492924  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  12492923 atcgtattcaagctgggtggttgaaat 12492897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 40383794 - 40383941
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaacctaagtccat-atctttttaccttagttttgga 126  Q
    ||||||||| ||| |||  || |||| |||||||| |  ||||| |||||| ||| ||| ||||||| | |  |||| |||||||||| ||||| |||||    
T  40383794 gtgtgaggaagcaagatagggccaccgacgatttttcaataacattatgatcgcaccaatgatcaacattaaaccattatctttttactttagtcttgga 40383893  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttt 174  Q
    |||||||| | |||| || ||||||||||||  |||||||||| ||||    
T  40383894 tgtacttacataacatattcaagagctagcactgagatgtatgctttt 40383941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 14099757 - 14099811
Alignment:
Q  120 ttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttt 174  Q
    |||||||| |||||||  ||||||| |||||||||||| ||||||||||||||||    
T  14099757 ttttggatatacttatgaaacacatgcaagagctagcaccgagatgtatgttttt 14099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 31502962 - 31502868
Alignment:
Q  57 gattttcccgtaacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaaga 150  Q
    ||||| ||| |||||||| ||||| | ||||| ||||| ||| |||| |||||||| |||||| ||||||||||||||| | |||| ||||||||    
T  31502962 gatttccccttaacaataggattgtaccaaggttcaacactacgtccttatcttttcaccttaattttggatgtacttacaaaacaaatccaaga 31502868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 35685437 - 35685491
Alignment:
Q  255 agaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttcta 309  Q
    |||||||||||| |||||||| ||| |||||||||||||||||| | ||||||||    
T  35685437 agaagcaagacaaagtatatgtaatgtaattttagcaaaagacgtagtatttcta 35685491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 37123946 - 37124056
Alignment:
Q  67 taacaatatgattgcatcaaggatcaacc-taagtccatatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatg 165  Q
    |||||||| |||| || |||| ||||| | |||| || |||||| |||| ||||||||||||||| |||||||| |||| ||| |||||| |||||||      
T  37123946 taacaataagattacaccaagaatcaatcataagcccttatcttcttactttagttttggatgtatttatagaatacattcaatagctagtatcgagaca 37124045  T
Q  166 tatgttttttg 176  Q
    |||| ||||||    
T  37124046 tatgctttttg 37124056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 252 - 441
Target Start/End: Original strand, 1274848 - 1275037
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaatta 351  Q
    ||||||||||||||  |||||||| ||| ||| || ||| ||||  ||| ||  ||||  || ||| | ||| ||||||||||||||||  | ||| |||    
T  1274848 agtagaagcaagacggagtatatggaatgtaacttcagcgaaaggagaagtaggtctaccttggagatgaaagttggagatcatatcataccccaagtta 1274947  T
Q  352 cacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaat 441  Q
    |||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  ||||  ||||||  ||||||||||||||    
T  1274948 cacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcgtattcaagctgggtggttgaaat 1275037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 27302573 - 27302496
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaag 402  Q
    ||||||||||||||||  | |||| |||||  |||||||||| || |||||||||| ||||||  |||||||||||||    
T  27302573 ttggagatcatatcatacctcaaactacacggtttaaatatcttgtgtccataatacaaaacggcggagaaatagaag 27302496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 403
Target Start/End: Complemental strand, 16348085 - 16347950
Alignment:
Q  268 agtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatca 367  Q
    |||||||||||| ||| || ||||||||  ||| ||  ||||  || ||||| ||| ||||||||||||||||  | ||| ||||||  ||||||||||     
T  16348085 agtatatgaaatgtaacttcagcaaaaggagaagtaggtctaccttggaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatct 16347986  T
Q  368 tgggtccataatataaaacgatggagaaatagaagc 403  Q
    || ||||||| || |||| || ||||||||| ||||    
T  16347985 tgtgtccatagtacaaaatgacggagaaataaaagc 16347950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 35685270 - 35685340
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgtttttt 175  Q
    ||||||||| | ||||||||||| ||| |||| |||||||| |||||| ||||| | |||||||||||||||    
T  35685270 tatctttttgctttagttttgga-gtatttatggaacacattcaagaggtagcaccaagatgtatgtttttt 35685340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 2076110 - 2075984
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| ||  |||||||||||||| || |||  |    
T  2076110 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacagagaaatagaagcagatgtaagcc 2076011  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  2076010 atcgtattcaagttgggtggttgaaat 2075984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 441
Target Start/End: Original strand, 10638943 - 10639069
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||| ||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || ||||||||||||||| || |||  |    
T  10638943 gaggtgaaagttggaaatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagcc 10639042  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  10639043 atcgtattcaagctgggtggttgaaat 10639069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 3096625 - 3096674
Alignment:
Q  120 ttttggatgtacttatagaacacatccaagagctagcatcgagatgtatg 169  Q
    ||||||||||||||| ||||||||||||| ||| |||| | |||||||||    
T  3096625 ttttggatgtacttacagaacacatccaaaagcgagcaccaagatgtatg 3096674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 397
Target Start/End: Complemental strand, 21363102 - 21363013
Alignment:
Q  308 tattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaat 397  Q
    ||||||| |||| |||| || | ||||||||||| ||||| ||||| | ||| |||||| ||| | |||| ||||||||||| |||||||    
T  21363102 tattttataggtgaaaaatgaacatcatatcattacacaagttacagagtttgaatatcttggattcatagtataaaacgatagagaaat 21363013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 200
Target Start/End: Original strand, 7672588 - 7672684
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtcctacttggag 200  Q
    ||||||||||| || |||||| || |||| ||  |||| ||| ||| ||||  ||||||||||||||||||| || ||| || ||||||| ||||||    
T  7672588 tatctttttacttttgttttgaatatactaatgtaacatatctaagtgctaatatcgagatgtatgttttttaaagatgttgtagtcctatttggag 7672684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 16134881 - 16134841
Alignment:
Q  126 atgtacttatagaacacatccaagagctagcatcgagatgt 166  Q
    ||||||||||||||||||||||||||  |||||| ||||||    
T  16134881 atgtacttatagaacacatccaagagtgagcatcaagatgt 16134841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 405
Target Start/End: Complemental strand, 17341827 - 17341747
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaa 405  Q
    ||||||||||||||||  |  ||||||||   |||||||||  |||||||||| || |||| ||| |||||||||||||||    
T  17341827 ttggagatcatatcatacctgaaattacatggtttaaatatattgggtccatagtagaaaatgatagagaaatagaagcaa 17341747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 23979815 - 23979903
Alignment:
Q  252 agtagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcat 340  Q
    |||| ||||||||||| ||||||| ||| ||| || | |||||||| || || ||| |  |||||||| ||| ||||||||||||||||    
T  23979815 agtaaaagcaagacatggtatatgtaatgtaacttcaacaaaagacaaagtagttcaaccttagaggtgaaagttggagatcatatcat 23979903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 441
Target Start/End: Original strand, 24178180 - 24178296
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattca 424  Q
    ||||||||||||||||  |  || ||||||  |||||| ||| ||||||| |  || |||| || ||||||||||||||| || |||  ||||| |||||    
T  24178180 ttggagatcatatcataccctaagttacacggtttaaagatcttgggtccttcgtacaaaatgacggagaaatagaagcagatgtaagccatcatattca 24178279  T
Q  425 atatgggtggttgaaat 441  Q
    |  ||||||||||||||    
T  24178280 agttgggtggttgaaat 24178296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 30806 - 30969
Alignment:
Q  28 gtgtgaggacgcacgatgaggtcaccaacgattttcccgtaacaatatgattgcatcaaggatcaa-cctaagtccatatctttttaccttagttttgga 126  Q
    ||||||||||||| |||| |   ||| | |||||||||  ||||||| || |||| ||||| |||| ||||||||| ||||||||||| |||||||||||    
T  30806 gtgtgaggacgcaggatgggactaccgaagattttcccaaaacaataggactgcaccaagggtcaatcctaagtccttatctttttactttagttttgga 30905  T
Q  127 tgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||| | |  ||||||||||||||| ||||| ||||||||||| |||||| | |||||| ||||    
T  30906 tgtattgacggaacacatccaagagttagcaccgagatgtatgctttttgcagatgatgtagtc 30969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 422 - 305
Alignment:
Q  51 accaacgattttcccgtaacaatatgattgcatcaaggatcaa-cctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaag 149  Q
    |||||||||||| || || ||||||||||||| ||||| |||| |||||| || || |||||||| |||||||||||||||||||  |||||||||||||    
T  422 accaacgatttttccatatcaatatgattgcaccaagggtcaatcctaagcccttacctttttactttagttttggatgtacttacggaacacatccaag 323  T
Q  150 agctagcatcgagatgta 167  Q
    || ||||| | |||||||    
T  322 agttagcaccaagatgta 305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 281 - 402
Target Start/End: Original strand, 9269 - 9390
Alignment:
Q  281 taattttagcaaaagacgaattatttctattttagaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataata 380  Q
    |||||||||||||||  ||||| |||||| ||||||||||||| |||||||||||||||| | |  | |||||| ||||||||||| | |||  ||| ||    
T  9269 taattttagcaaaaggtgaattgtttctagtttagaggtaaaagttggagatcatatcatattattagttacacgatttaaatatcttaggtttatatta 9368  T
Q  381 taaaacgatggagaaatagaag 402  Q
    |||||||||| |||||| ||||    
T  9369 taaaacgatgaagaaatggaag 9390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0606; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 9028 - 9131
Alignment:
Q  50 caccaacgattttcccgtaacaatatgattgcatcaaggatcaac-ctaagtccatatctttttaccttagttttggatgtacttatagaacacatccaa 148  Q
    |||| ||||||||||| |||||||| ||||||| |||||  |||| ||||  |  |||||||| |  ||||||||||||||||||| | |||||||||||    
T  9028 caccgacgattttcccataacaataggattgcaccaaggtacaacactaaaccattatcttttcattttagttttggatgtacttacaaaacacatccaa 9127  T
Q  149 gagc 152  Q
    ||||    
T  9128 gagc 9131  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 437
Target Start/End: Original strand, 82377 - 82489
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattca 424  Q
    |||||||| |||||||  ||||| ||||||  |||||||||| |||||||||| || |||| || ||||||||||||||| || ||| |||||  |||||    
T  82377 ttggagattatatcataccacaagttacacggtttaaatatcttgggtccatagtaaaaaatgacggagaaatagaagcagatgtaaatcatcgtattca 82476  T
Q  425 atatgggtggttg 437  Q
    |  ||||||||||    
T  82477 agctgggtggttg 82489  T

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Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 88855 - 88760
Alignment:
Q  51 accaacgattttcccgtaacaatatgattgcatcaaggatcaa-cctaagtccatatctttttaccttagttttggatgtacttatagaacacatc 145  Q
    ||||| |||||||||||||| ||| ||||||| ||||| |||| ||||||||| || |||||||| ||| ||||||||||||| |  |||||||||    
T  88855 accaaagattttcccgtaaccataggattgcaccaagggtcaaccctaagtccttaactttttacattacttttggatgtactaaaggaacacatc 88760  T

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Target: scaffold0570 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 441
Target Start/End: Complemental strand, 2906 - 2780
Alignment:
Q  315 gaggtaaaaattggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattc 414  Q
    ||||| ||| ||||||||||||||||  | ||| ||||||  |||||||||| ||||||| |  || |||| || | ||||||||||||| || ||| ||    
T  2906 gaggtgaaagttggagatcatatcataccccaagttacacggtttaaatatcttgggtccttcgtacaaaatgacgaagaaatagaagcagatgtaagtc 2807  T
Q  415 atcaaattcaatatgggtggttgaaat 441  Q
    |||  ||||||  ||||||||||||||    
T  2806 atcgtattcaagctgggtggttgaaat 2780  T

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Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 12442 - 12373
Alignment:
Q  121 tttggatgtacttatagaacacatccaagagctagcatcgagatgtatgttttttgaaaatgatgcagtc 190  Q
    |||||||||| | | ||||||||| |||||| ||||| ||||||||||| |||||||| |||||| ||||    
T  12442 tttggatgtattgacagaacacattcaagagttagcaccgagatgtatgctttttgaagatgatgtagtc 12373  T

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Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 12224 - 12145
Alignment:
Q  325 ttggagatcatatcatttcacaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagca 404  Q
    ||||||||||||||||  | ||| |||||   |||||||||| |||||||||| || |||| || |||||||||||||||    
T  12224 ttggagatcatatcataccccaagttacatggtttaaatatcttgggtccatagtacaaaatgacggagaaatagaagca 12145  T

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Target: scaffold0220 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 25080 - 25020
Alignment:
Q  104 tatctttttaccttagttttggatgtacttatagaacacatccaagagctagcatcgagat 164  Q
    ||||||||||| ||||||||| |||| ||||| ||||||||| ||||| ||||| ||||||    
T  25080 tatctttttactttagttttgaatgttcttatggaacacatctaagagttagcaccgagat 25020  T

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Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 24918 - 24863
Alignment:
Q  254 tagaagcaagacatagtatatgaaatataattttagcaaaagacgaattatttcta 309  Q
    ||||||||||||| |||||||||||| ||| ||||| |||||||||| || |||||    
T  24918 tagaagcaagacagagtatatgaaatgtaactttagtaaaagacgaagtagttcta 24863  T

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Target: scaffold0896 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 4386 - 4286
Alignment:
Q  344 acaaattacacaatttaaatatcatgggtccataatataaaacgatggagaaatagaagcaaatataattcatcaaattcaatatgggtggttgaaatta 443  Q
    |||| ||||| |||||||||||| | |||| ||| || ||||||||||| |||| |||| |||| |||  ||| | ||||||  ||| ||||||||||||    
T  4386 acaagttacaaaatttaaatatcttaggtctatagtacaaaacgatggataaattgaagaaaatctaaaccataagattcaagctggatggttgaaatta 4287  T
Q  444 a 444  Q
    |    
T  4286 a 4286  T

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