View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16757_low_75 (Length: 238)
Name: NF16757_low_75
Description: NF16757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16757_low_75 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 9511388 - 9511168
Alignment:
| Q |
1 |
atatccaattaaccatcccgcactgaataaactgtcaacaccaacttacggcctggaaaatcattccttactattcatgtagcttcaaattaattaatta |
100 |
Q |
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| T |
9511388 |
atatccaattaaccatcccgcactgaataacttgtcaacaccaacttacggcctggaaaatcattccttactattcatgtagcttcaaattaattaatta |
9511289 |
T |
|
| Q |
101 |
gacatatttggcaaaaccatgcaaatttgatttcaaaactctattgatcttcaactgattcattaatccacctagtaattagaagaagtaaaagagtggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
9511288 |
gacatatttggcaaaaccatgcaaatttgatttcaaaactctattgatcttcaactgattcattaatccacctagtaattagaagaagtaaaagagtagt |
9511189 |
T |
|
| Q |
201 |
gtgaccaaatcaataagagtt |
221 |
Q |
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||||||||||||||||||||| |
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| T |
9511188 |
gtgaccaaatcaataagagtt |
9511168 |
T |
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