View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16757_low_83 (Length: 216)
Name: NF16757_low_83
Description: NF16757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16757_low_83 |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 33445975 - 33446155
Alignment:
| Q |
20 |
ctaaggtcatgtagacttctctgtcatccaggctcaccatgagagagtatacacatctaatttgcagttagacttgggagaagttgaatcctgtgtttca |
119 |
Q |
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| T |
33445975 |
ctaaggtcatgtagacttctctgtcatccaggctcaccatgagagagtatacacatctaatttgcagttagacttgggagaagttgaatcctgtgtttca |
33446074 |
T |
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| Q |
120 |
gggcccaaaaggtatgataaccaactaatagacatagtttaacgcctgtattcctttatattattgtactgtctctttctt |
200 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33446075 |
gggcccaaaaggtatgataaccgactaatagacatagtttaacgcctgtattcctttatattattgtactgtctctttctt |
33446155 |
T |
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