View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16758_high_30 (Length: 352)
Name: NF16758_high_30
Description: NF16758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16758_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 16 - 342
Target Start/End: Original strand, 10158796 - 10159122
Alignment:
| Q |
16 |
gttgcaacgtatatatcatccacaaaccctagtttcatactaaagcaatgtaactcttcacctttcttcaacagagatggacctgcacatgcacaaagta |
115 |
Q |
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| T |
10158796 |
gttgcaacgtatatatcatccacaaaccctagtttcatactaaagcaatgtaactcttcacctttcttcaacagagatggacctgcacatgcacaaagta |
10158895 |
T |
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| Q |
116 |
agctgcaaatcgtggttgagttaggttttacattctcggcttgcatttgactgaaaatctttagggcgtccatgtacttctcgttttgagaacacccaga |
215 |
Q |
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| T |
10158896 |
agctgcaaatcgtggttgagttaggttttacattctcggcttgcatttgactgaaaatctttagggcgtccatgtacttctcgttttgagaacacccaga |
10158995 |
T |
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| Q |
216 |
tatcaaagcagtccaagacaccacattaggagtgattccggaactcttgatccgattgatgatagtcaaagcttcatcgatacggccttgcattgaataa |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10158996 |
tatcaaagcagtccaagacaccacattaggagtgattccggaactcttgatccgattgatgatagtcaaagcttcatcgatacggccttgcattgaataa |
10159095 |
T |
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| Q |
316 |
ccagaaaccaaaccgtttcatatcact |
342 |
Q |
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| T |
10159096 |
ccagaaaccaaaccgttccatgtcact |
10159122 |
T |
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