View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16758_high_49 (Length: 245)
Name: NF16758_high_49
Description: NF16758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16758_high_49 |
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Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 48 - 240
Target Start/End: Original strand, 46401068 - 46401260
Alignment:
| Q |
48 |
gaattctcacttccgatgcagaattctggttacattactggaagtgatgcactgctcaaagtacgttgttattttgcttctagttttttgaattatggat |
147 |
Q |
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| T |
46401068 |
gaattctcacttccgatgcagaattctggttacattactggaagtgatgcactgctcaaagtacgttgttattttgcttctagttttttgaattatggat |
46401167 |
T |
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| Q |
148 |
tcaattttgtgctctgttaataaagcttaagtacatctagttttatttaatttaataatttatttgtcctctgttttgcagagaaagtctgtg |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46401168 |
tcaattttgtgctctgttaataaagcttaagtacatctagttttatttaatttaataatttatttgtcctctgttttgcagagaaagtctgtg |
46401260 |
T |
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