View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16758_low_47 (Length: 268)
Name: NF16758_low_47
Description: NF16758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16758_low_47 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 46763206 - 46762949
Alignment:
| Q |
1 |
attcctacttccatattcaacctcacctcctaaagaaagaaaacagtaactgagtttatttggatgccaagaaattgtagcaatctaacttattattcaa |
100 |
Q |
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| T |
46763206 |
attcctacttccatattcaacctcacctcctaaagaaggaaaacagtaactgagtttatttggatgccaagaaattgtagcaatctaacttattattcaa |
46763107 |
T |
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| Q |
101 |
caaagataataattgaagaataaattgttgaaattgatcactattaaaaagtgaattttgaagaaaaaacaaagatactaacctccataaacaacagcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46763106 |
caaagataataattgaagaataaattgttgaaattgatcactattaaaaagtgaattttgaagaaaaaacaaagatactaacctccataaacaacagcat |
46763007 |
T |
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| Q |
201 |
ctgcttgaatatcttcacatttgcttttgaaattaaaaaactttctaaccatattctt |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
46763006 |
ctgcttgaatatcttcacatttgcttttgaaattaaaaaactttctaaccattttctt |
46762949 |
T |
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