View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16759_low_5 (Length: 282)
Name: NF16759_low_5
Description: NF16759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16759_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 269
Target Start/End: Complemental strand, 5911991 - 5911740
Alignment:
| Q |
18 |
atattatgtagtagaaagaagaaagagaataatagagttgttttttggtgggagttgtcattttctgcttattttgttgcttaatttgtctacttagaga |
117 |
Q |
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| T |
5911991 |
atattatgtagtagaaagaagaaagagaataatagagttgttttttggtgggagttgtcattttctgcttattttgttgcttaatttgtctacttagaga |
5911892 |
T |
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| Q |
118 |
gagtgtttttgattgtgggctcaatttttgagtttacaaatttcttataactttttgttccaatgagactctcttcagctagttttagtcctccacccca |
217 |
Q |
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| T |
5911891 |
gagtgtttttgattgtgggctcaatttttgagtttacaaatttcttataactttttgttccaatgagactctcttcagctagttttagtcctccacccca |
5911792 |
T |
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| Q |
218 |
agaaggtacttaacaatttcttgcagattcttcttcctttttcttttcatct |
269 |
Q |
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| T |
5911791 |
agaaggtacttaacaatttcttgcagattcttcttcctttttcttttcatct |
5911740 |
T |
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