View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16763_high_12 (Length: 346)
Name: NF16763_high_12
Description: NF16763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16763_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 330
Target Start/End: Original strand, 37967586 - 37967915
Alignment:
| Q |
1 |
attattctggaaatgttatgtctgtggaaagcatcggttctgctggacatattacattgcagacagaaaatcaatatgacattgatgctagtttttatcg |
100 |
Q |
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| T |
37967586 |
attatgctggaaatgttatgtctggggaaagcatcggttctgctggacatattacattgcagacagaaaatcaatatgacattgatgctagtttttatcg |
37967685 |
T |
|
| Q |
101 |
taagaggggcatggcaggatacgggtgctgtttacgaaatagagcaggccaatttgtcaaggcgcccacgggttggtatccatctgtaatgcaagtacag |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37967686 |
taataggggcatggcaggatacgggtgctgtttacgaaatagagcaggccaatttgtcaaggcgcccacgggttggtatccatctgtaatgcaagtacag |
37967785 |
T |
|
| Q |
201 |
gaagggtgtaactgctgcattgttgaatgctatgcgatcgatacaagagatgggaattcatagagtgactttccatactgatttacaagttttagctggt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37967786 |
gaagggtgtaactgctgcattgttgaatgctatgcgatcgatacaagagatgggaattcatagagtgactttccatactgatttacaagttttagctggt |
37967885 |
T |
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| Q |
301 |
gccattcatgctagcagaggaggtgtttct |
330 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37967886 |
gccattcatgctagcagaggaggtgtttct |
37967915 |
T |
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