View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16763_high_16 (Length: 305)
Name: NF16763_high_16
Description: NF16763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16763_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 34501676 - 34501379
Alignment:
| Q |
1 |
ttaaccaacgagtctcagagagatgttaatgtgttagagtggaggcctaatggtgggaggatgcttgctgttggtagcaagtgagtttctgtctttgtgc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501676 |
ttaaccaacgagtctcagagagatgttaatgtgttagagtggaggcctaatggtgggaggatgcttgctgttggtagcaagtgagtttctgtctttgtgc |
34501577 |
T |
|
| Q |
101 |
tcggttgtacagtgtcaattgttgggtcattggattttttgttaactggacttgggtttactgatgcaggagtggaatttgcttgtggtctgcttcatat |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501576 |
tcggttgtacaatgtcaattgttgggtcattggattttttgttaactggacttgggtttactgatgcaggagtggaatttgcttgtggtctgcttcatat |
34501477 |
T |
|
| Q |
201 |
cctggaaatgccgcatctgctagatctggcactatttcctttgtaggaagtttatctagaggctctggaattcggtatctcctagtcgattttcttcg |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34501476 |
cctggaaatgccgcatctgctagatctggcactatttcctttgtaggaagtttatctagaggctctggaattcggtatctcctagtcgattttcttcg |
34501379 |
T |
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