View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16763_low_8 (Length: 432)
Name: NF16763_low_8
Description: NF16763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16763_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 16201577 - 16201999
Alignment:
| Q |
1 |
taacctcctcttcacttcttcactctcagtcaccttccctcttggcctatgcacttcctttccatcatctcc---tctcttgtgcacagcatcagaaacc |
97 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
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| T |
16201577 |
taacctcctcttcacttcttcactctcagtcaccttccctcttggcctatgcacttcctttccatcatctcctcctctcttgtgcacagcattggaaacc |
16201676 |
T |
|
| Q |
98 |
acttttctcgcatttcgtccttctccttcatcataaacatcttccacagcttcatctacatttttcttgtacagcttctcagatattacctcagagagag |
197 |
Q |
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||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16201677 |
actttccttgcatttcgtccttctccttcatcataaacatcttccacagcttcatctacatttttcttgtacagcttctcagatattacctcagagagag |
16201776 |
T |
|
| Q |
198 |
ctctatcttcttcacctggtcttaacttttcggagaaatagtctttcattgatactcctttatcttgttctacaccagcagttactctttcagttcctgt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16201777 |
ctctatcttcttcacctggtcttaacttttcggagaaatagtctttcattgatactcctttatcttgttctacaccagcagttactctttcagttcctgt |
16201876 |
T |
|
| Q |
298 |
gccggtaactttgccagtaaccggagataacttctctgtcaaggaagctgcaatattctttccatattctgcaggtgaaactccagaattgttctcttca |
397 |
Q |
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|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
16201877 |
gccgataactttgccagtaactggagataacttctctgtcaaggaagctgcaatattctttccatattctgcaggtgagactccagaattgttctcttcg |
16201976 |
T |
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| Q |
398 |
taggttgtcattttctctgtctc |
420 |
Q |
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|||||||||||| |||||||||| |
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| T |
16201977 |
taggttgtcattctctctgtctc |
16201999 |
T |
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