View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16764_high_2 (Length: 488)

Name: NF16764_high_2
Description: NF16764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16764_high_2
NF16764_high_2
[»] chr8 (30 HSPs)
chr8 (21-366)||(3655011-3655356)
chr8 (367-481)||(16383377-16383491)
chr8 (367-481)||(16056387-16056501)
chr8 (367-481)||(24307779-24307893)
chr8 (367-481)||(30479460-30479574)
chr8 (367-481)||(34307216-34307330)
chr8 (367-481)||(32032725-32032838)
chr8 (367-448)||(24307629-24307710)
chr8 (366-471)||(15048178-15048282)
chr8 (367-471)||(4854859-4854963)
chr8 (369-471)||(10621083-10621185)
chr8 (365-471)||(15197331-15197437)
chr8 (365-471)||(43414577-43414683)
chr8 (372-481)||(5957835-5957944)
chr8 (364-437)||(20074964-20075037)
chr8 (366-471)||(40423939-40424044)
chr8 (367-471)||(12831047-12831151)
chr8 (365-471)||(504117-504223)
chr8 (367-481)||(37038479-37038593)
chr8 (374-471)||(14547929-14548026)
chr8 (411-481)||(32707989-32708061)
chr8 (367-471)||(1179936-1180040)
chr8 (364-471)||(23122593-23122700)
chr8 (364-471)||(34012292-34012399)
chr8 (367-481)||(15258915-15259029)
chr8 (367-481)||(17443825-17443939)
chr8 (388-481)||(8841418-8841511)
chr8 (367-472)||(10284626-10284731)
chr8 (367-471)||(44507083-44507187)
chr8 (367-472)||(42221515-42221620)
[»] chr5 (24 HSPs)
chr5 (367-481)||(2252154-2252268)
chr5 (367-481)||(3921251-3921365)
chr5 (365-471)||(28177773-28177879)
chr5 (367-477)||(39688887-39688997)
chr5 (366-481)||(26720515-26720630)
chr5 (366-481)||(26990264-26990379)
chr5 (367-452)||(6679698-6679783)
chr5 (367-471)||(2740274-2740378)
chr5 (365-481)||(14831812-14831928)
chr5 (367-471)||(15409606-15409710)
chr5 (372-471)||(18520880-18520979)
chr5 (372-432)||(16327906-16327966)
chr5 (363-471)||(40145403-40145511)
chr5 (365-471)||(42414298-42414404)
chr5 (367-432)||(33825359-33825424)
chr5 (371-430)||(10356638-10356698)
chr5 (367-471)||(36732938-36733042)
chr5 (364-471)||(33149634-33149741)
chr5 (367-481)||(31008988-31009102)
chr5 (366-432)||(35785198-35785264)
chr5 (367-432)||(35943927-35943992)
chr5 (374-470)||(13811659-13811755)
chr5 (367-450)||(9603813-9603896)
chr5 (372-426)||(36875644-36875698)
[»] chr6 (15 HSPs)
chr6 (366-481)||(15508010-15508125)
chr6 (367-481)||(15990028-15990142)
chr6 (367-481)||(30341346-30341460)
chr6 (366-481)||(4231547-4231662)
chr6 (367-471)||(31976248-31976352)
chr6 (365-481)||(31953016-31953132)
chr6 (364-471)||(32869675-32869782)
chr6 (372-481)||(28536474-28536581)
chr6 (367-471)||(31110757-31110859)
chr6 (367-438)||(12732482-12732553)
chr6 (372-471)||(22880654-22880753)
chr6 (365-471)||(17598552-17598658)
chr6 (388-471)||(11427639-11427722)
chr6 (388-471)||(31109396-31109479)
chr6 (411-481)||(30870058-30870128)
[»] chr3 (33 HSPs)
chr3 (366-481)||(45058539-45058653)
chr3 (389-481)||(36331315-36331407)
chr3 (360-481)||(42823104-42823225)
chr3 (367-481)||(14623825-14623939)
chr3 (367-471)||(41189760-41189864)
chr3 (364-471)||(26141528-26141635)
chr3 (372-481)||(13898041-13898150)
chr3 (362-471)||(53982006-53982115)
chr3 (366-471)||(20764911-20765016)
chr3 (367-471)||(11347918-11348022)
chr3 (367-471)||(47531865-47531969)
chr3 (367-471)||(51419356-51419460)
chr3 (370-481)||(26754698-26754809)
chr3 (367-481)||(8076393-8076507)
chr3 (366-471)||(33644199-33644304)
chr3 (367-471)||(11907371-11907475)
chr3 (371-471)||(52629304-52629404)
chr3 (367-470)||(27714888-27714991)
chr3 (372-471)||(31456694-31456793)
chr3 (388-471)||(48587087-48587170)
chr3 (367-449)||(24699972-24700054)
chr3 (371-481)||(25395319-25395429)
chr3 (367-481)||(35536626-35536740)
chr3 (367-432)||(11095388-11095453)
chr3 (367-432)||(49607414-49607479)
chr3 (367-481)||(8956762-8956876)
chr3 (367-437)||(36331408-36331478)
chr3 (367-432)||(33118886-33118951)
chr3 (367-432)||(54868930-54868995)
chr3 (372-472)||(30801728-30801828)
chr3 (372-481)||(25407133-25407243)
chr3 (367-437)||(35965804-35965874)
chr3 (367-471)||(17470405-17470509)
[»] chr1 (29 HSPs)
chr1 (366-481)||(50590986-50591101)
chr1 (366-481)||(41608479-41608594)
chr1 (365-481)||(47748441-47748556)
chr1 (367-481)||(5958986-5959100)
chr1 (408-481)||(44332357-44332430)
chr1 (367-471)||(32813247-32813351)
chr1 (367-481)||(37926424-37926538)
chr1 (367-471)||(3000319-3000423)
chr1 (364-471)||(27564731-27564838)
chr1 (367-481)||(45044546-45044660)
chr1 (366-471)||(9474872-9474977)
chr1 (362-471)||(49811523-49811632)
chr1 (367-467)||(2581915-2582015)
chr1 (367-471)||(38595154-38595258)
chr1 (360-471)||(26440727-26440838)
chr1 (367-481)||(51898669-51898783)
chr1 (367-440)||(23597118-23597191)
chr1 (365-481)||(6260868-6260984)
chr1 (365-437)||(37649196-37649268)
chr1 (372-471)||(44548372-44548471)
chr1 (364-450)||(3302550-3302636)
chr1 (367-481)||(7740733-7740847)
chr1 (365-471)||(47452316-47452422)
chr1 (366-471)||(48716278-48716383)
chr1 (389-471)||(8346384-8346466)
chr1 (394-471)||(41758832-41758909)
chr1 (367-471)||(43132-43236)
chr1 (367-471)||(38632317-38632421)
chr1 (367-471)||(50630458-50630562)
[»] chr4 (30 HSPs)
chr4 (367-481)||(8343149-8343263)
chr4 (367-481)||(19670702-19670816)
chr4 (367-481)||(55475191-55475305)
chr4 (367-480)||(32766958-32767071)
chr4 (367-481)||(29547945-29548059)
chr4 (367-481)||(47986208-47986322)
chr4 (367-481)||(50813878-50813992)
chr4 (388-481)||(17983729-17983822)
chr4 (367-481)||(55079699-55079814)
chr4 (364-481)||(18924481-18924598)
chr4 (375-481)||(29589726-29589831)
chr4 (367-481)||(44536732-44536845)
chr4 (366-481)||(11511448-11511563)
chr4 (367-481)||(50052414-50052528)
chr4 (366-471)||(31910191-31910296)
chr4 (366-471)||(6034043-6034148)
chr4 (390-481)||(29977908-29977999)
chr4 (365-432)||(40574777-40574844)
chr4 (362-471)||(48183045-48183154)
chr4 (366-437)||(50526201-50526272)
chr4 (367-471)||(480443-480547)
chr4 (367-471)||(41236347-41236451)
chr4 (367-481)||(48647712-48647826)
chr4 (367-471)||(42044363-42044467)
chr4 (365-432)||(3481652-3481719)
chr4 (388-471)||(24995103-24995186)
chr4 (367-481)||(29239886-29240000)
chr4 (366-471)||(54473529-54473634)
chr4 (367-471)||(29234241-29234345)
chr4 (411-471)||(41823926-41823986)
[»] chr7 (32 HSPs)
chr7 (366-481)||(32564412-32564527)
chr7 (367-481)||(22343361-22343475)
chr7 (367-481)||(41915741-41915855)
chr7 (367-481)||(38044197-38044311)
chr7 (365-481)||(8238210-8238327)
chr7 (367-481)||(7727906-7728020)
chr7 (367-481)||(40846099-40846213)
chr7 (367-457)||(26296644-26296734)
chr7 (368-471)||(35522877-35522980)
chr7 (367-457)||(46374812-46374902)
chr7 (367-471)||(46033797-46033901)
chr7 (367-471)||(8080379-8080483)
chr7 (365-471)||(19329840-19329946)
chr7 (365-470)||(21234399-21234504)
chr7 (367-471)||(3434562-3434666)
chr7 (367-471)||(7389389-7389493)
chr7 (367-481)||(36208173-36208287)
chr7 (367-472)||(35468850-35468955)
chr7 (366-471)||(38267039-38267144)
chr7 (367-471)||(36361909-36362013)
chr7 (367-481)||(19436173-19436287)
chr7 (365-471)||(35137531-35137637)
chr7 (367-471)||(36362026-36362130)
chr7 (367-471)||(38837217-38837321)
chr7 (366-438)||(39255952-39256024)
chr7 (372-471)||(3784000-3784099)
chr7 (367-438)||(18207180-18207251)
chr7 (365-419)||(31735882-31735936)
chr7 (372-450)||(32045842-32045920)
chr7 (367-432)||(40957707-40957772)
chr7 (372-472)||(2318238-2318338)
chr7 (367-471)||(4999510-4999614)
[»] chr2 (32 HSPs)
chr2 (367-481)||(45097721-45097835)
chr2 (365-481)||(43490119-43490235)
chr2 (367-481)||(13365351-13365467)
chr2 (388-481)||(2997473-2997566)
chr2 (367-481)||(38732354-38732468)
chr2 (365-471)||(40613898-40614004)
chr2 (367-471)||(42257193-42257297)
chr2 (421-481)||(3034969-3035029)
chr2 (358-471)||(38273138-38273251)
chr2 (367-471)||(9058480-9058584)
chr2 (367-471)||(5574484-5574588)
chr2 (367-471)||(36168836-36168940)
chr2 (372-471)||(28863460-28863559)
chr2 (367-441)||(15428766-15428840)
chr2 (367-481)||(26891490-26891604)
chr2 (367-472)||(33436095-33436200)
chr2 (367-472)||(33436211-33436316)
chr2 (366-437)||(17820034-17820105)
chr2 (367-471)||(30915463-30915567)
chr2 (372-471)||(19930816-19930915)
chr2 (364-471)||(28381651-28381758)
chr2 (365-471)||(13438341-13438447)
chr2 (367-471)||(2533124-2533227)
chr2 (367-471)||(7465731-7465835)
chr2 (367-471)||(10249378-10249482)
chr2 (367-471)||(17473020-17473124)
chr2 (367-481)||(20700815-20700929)
chr2 (366-432)||(40701477-40701543)
chr2 (365-473)||(27864702-27864810)
chr2 (367-467)||(32505648-32505748)
chr2 (410-457)||(3737986-3738033)
chr2 (367-432)||(38882849-38882913)
[»] scaffold0018 (1 HSPs)
scaffold0018 (392-481)||(152523-152612)
[»] scaffold0316 (1 HSPs)
scaffold0316 (364-483)||(17055-17170)
[»] scaffold0321 (1 HSPs)
scaffold0321 (367-432)||(10144-10209)
[»] scaffold1268 (1 HSPs)
scaffold1268 (365-481)||(915-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (365-481)||(915-1031)


Alignment Details
Target: chr8 (Bit Score: 322; Significance: 0; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 21 - 366
Target Start/End: Original strand, 3655011 - 3655356
Alignment:
Q  21 tttggctaggttgattcaagggtttgatataaacacaaaagatggtggtccagttgatatgattgaaggagtaggattggcattgcctaaggaaaatcca 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3655011 tttggctaggttgattcaagggtttgatataaacacaaaagatggtggtccagttgatatgattgaaggagtaggattggcattgcctaaggaaaatcca 3655110  T
Q  121 cttgatgttatgctccaaccacgtctcccattggagctttatgaaagcctttgatatttgtatcaagtgtcaaaagaaaatataaaatatagttttgttt 220  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3655111 cttgatgttatgctccaaccacgtctcccattggaactttatgaaagcctttgatatttgtatcaagtgtcaaaagaaaatataaaatatagtttttttt 3655210  T
Q  221 ttcttttctgataaaatacattgtttgaataatatgatatgagatgggagctcatgaataatcatatctctagaaatatacaataatgtaatgtactttt 320  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3655211 ttcttttctgataaaatatattgtttgaataatatgatatgagatgggagctcatgaataatcatatctctagaaatatacaataatgtaatgtactttt 3655310  T
Q  321 tattttggaaatgtgttaaaatccacatgaatgctagaaattatat 366  Q
    |||||||||||||| | || ||||||||||||||||||||||||||    
T  3655311 tattttggaaatgtctcaagatccacatgaatgctagaaattatat 3655356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 16383377 - 16383491
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  16383477 tctttcttcttctct 16383491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 16056501 - 16056387
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||| ||| ||||| | || |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  16056401 tctttcttcttctct 16056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 24307893 - 24307779
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| | || |||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  24307793 tctttcttcttctct 24307779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 30479574 - 30479460
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||||||| ||| |||||| ||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  30479474 tctttcttcttctct 30479460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 34307216 - 34307330
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||| ||||||| |||||| ||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  34307316 tctttcttcttctct 34307330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 32032725 - 32032838
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| | || |||||| ||||| |||||||||||||||||||||||||| || || |||||| ||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttc 32032823  T
Q  467 tctttcttcttctct 481  Q
    ||||||| |||||||    
T  32032824 tctttctccttctct 32032838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 367 - 448
Target Start/End: Original strand, 24307629 - 24307710
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacc 448  Q
    |||||||||||||||||||  |||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggccatatggacc 24307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 366 - 471
Target Start/End: Complemental strand, 15048282 - 15048178
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    |||||||||||||||| |||| |||||||||||||| |||| |||||| ||||| |||||||||||| || |||| ||||||||||| |||| | |||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  466 ctcttt 471  Q
    ||||||    
T  15048183 ctcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 4854963 - 4854859
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||||||||| |||| || ||||| |||||||||||||| ||||||||| |||||||| || |||| | ||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  467 tcttt 471  Q
    |||||    
T  4854863 tcttt 4854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 471
Target Start/End: Complemental strand, 10621185 - 10621083
Alignment:
Q  369 gttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctc 468  Q
    ||||||||||||| |||| ||||||||| |||| |||| |||||||||||| |||||||||||| || |||| || || ||||| |||| | ||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  469 ttt 471  Q
    |||    
T  10621085 ttt 10621083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 15197331 - 15197437
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  465 tctcttt 471  Q
    |||||||    
T  15197431 tctcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 471
Target Start/End: Complemental strand, 43414683 - 43414577
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||||||| |||| ||||| |||||| | |||| |||||||||||| |||||||| ||| |||| || ||||| ||||| |||| | ||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactt 43414584  T
Q  465 tctcttt 471  Q
    |||||||    
T  43414583 tctcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 5957835 - 5957944
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||  | |||||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctcttt 5957934  T
Q  472 cttcttctct 481  Q
    | ||| ||||    
T  5957935 cctctcctct 5957944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 437
Target Start/End: Complemental strand, 20075037 - 20074964
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 437  Q
    ||||||| |||||||||| |||| |||||||||||||| || | ||||||||||||||||||| ||||| ||||    
T  20075037 tatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 471
Target Start/End: Complemental strand, 40424044 - 40423939
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| | |  |||||||||||||| |||| |||||| ||||| |||||||||||| || | ||| |||||||||| |||| | |||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  466 ctcttt 471  Q
    ||||||    
T  40423944 ctcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||| ||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  467 tcttt 471  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 471
Target Start/End: Complemental strand, 504223 - 504117
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  |||||||||||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | || |    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacat 504124  T
Q  465 tctcttt 471  Q
    |||||||    
T  504123 tctcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 37038479 - 37038593
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| ||||  ||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  467 tctttcttcttctct 481  Q
    | |||| ||| ||||    
T  37038579 tatttcctctcctct 37038593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 374 - 471
Target Start/End: Original strand, 14547929 - 14548026
Alignment:
Q  374 gatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||| |||  |||||||||||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  14547929 gatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 481
Target Start/End: Complemental strand, 32708061 - 32707989
Alignment:
Q  411 acacccacataaaaatctgacatgtggccatatggaccccgcgcaagt--atactttctctttcttcttctct 481  Q
    ||||||| | |||||||||| ||||||| ||||||||||||| |||||  | |||||||||||||||||||||    
T  32708061 acacccatacaaaaatctgagatgtggctatatggaccccgcacaagtacacactttctctttcttcttctct 32707989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||||||||| || | ||| ||||  |||| |||| | ||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  467 tcttt 471  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 471
Target Start/End: Complemental strand, 23122700 - 23122593
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||| |||||||||| |||  |||| ||||||||| |||  |||||||||||| |||||||||||| || | ||  ||||||||||  ||| | |||    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  23122600 ttctcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 471
Target Start/End: Complemental strand, 34012399 - 34012292
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||| ||||| || | ||  |||| ||||| |||| | |||    
T  34012399 tatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 34012300  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  34012299 ttctcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 15259029 - 15258915
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| | |  ||||| |||||||| | || | |||| ||||||||||||||||||||||| ||  ||||||| || |||| | | ||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  15258929 tctttcctctcctct 15258915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 17443825 - 17443939
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||  |||||||| ||||| ||   || |||| |||| ||||||||||||||| | ||| |||||||| | |||  | ||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||||||||    
T  17443925 tctttcatcttctct 17443939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 8841511 - 8841418
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    ||||||||||| || |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | |||||||||||| ||| ||||    
T  8841511 cttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctct 8841418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 10284731 - 10284626
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||  |||| ||| ||||| || | |||||||||||| |||||| ||||| || | ||  |||||||||| |||| | ||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  467 tctttc 472  Q
    ||||||    
T  10284631 tctttc 10284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 44507187 - 44507083
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||||||| |||| || | || ||||||||| |||||||||||| || | ||  |||||||||  |||| ||||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  467 tcttt 471  Q
    |||||    
T  44507087 tcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 42221515 - 42221620
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||| ||||| |  | | |||||||||| |||||||||||| ||   ||||||||||||   |||| | ||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  467 tctttc 472  Q
    ||||||    
T  42221615 tctttc 42221620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 2252268 - 2252154
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  2252168 tctttcttcttctct 2252154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 3921365 - 3921251
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  3921265 tctttcttcttctct 3921251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 28177773 - 28177879
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| |||| || ||||||||||| |||  | ||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  465 tctcttt 471  Q
    |||||||    
T  28177873 tctcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 367 - 477
Target Start/End: Complemental strand, 39688997 - 39688887
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||| ||||||||| | || |||||||||||| |||||||||| |||||| |||||| |||||||  ||||| ||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  467 tctttcttctt 477  Q
    |||||||||||    
T  39688897 tctttcttctt 39688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 366 - 481
Target Start/End: Original strand, 26720515 - 26720630
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    |||||||||||||||| |||| |||||||||||||| |||| || ||||| ||| |||||||||||| ||||||| ||||| ||||| |||| | |||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  466 ctctttcttcttctct 481  Q
    ||||||  ||||||||    
T  26720615 ctcttttctcttctct 26720630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 366 - 481
Target Start/End: Original strand, 26990264 - 26990379
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    |||||||||||||||| |||| |||||||||||||| |||| || ||||| ||| |||||||||||| ||||||| ||||| ||||| |||| | |||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  466 ctctttcttcttctct 481  Q
    ||||||  ||||||||    
T  26990364 ctcttttctcttctct 26990379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 367 - 452
Target Start/End: Original strand, 6679698 - 6679783
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgc 452  Q
    ||||||||||||||| ||||  ||||||||||||| |||  |||||||||||| |||||||||||| |||| || |||||||||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgc 6679783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 2740274 - 2740378
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  467 tcttt 471  Q
    |||||    
T  2740374 tcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 14831812 - 14831928
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||| || | ||  |||| ||||| |||| | ||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 14831911  T
Q  465 tctctttcttcttctct 481  Q
    ||| ||| |||| ||||    
T  14831912 tcttttttttctcctct 14831928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 15409710 - 15409606
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| |||||||| ||||| |  | |||||||||||| |||||||||||| || |||| ||||||||||| |||| | ||| ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  467 tcttt 471  Q
    |||||    
T  15409610 tcttt 15409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 471
Target Start/End: Complemental strand, 18520979 - 18520880
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 372 - 432
Target Start/End: Original strand, 16327906 - 16327966
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||||| ||||| || |||||||||||||| | ||||||||||||||||||||||||||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgaca 16327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 471
Target Start/End: Original strand, 40145403 - 40145511
Alignment:
Q  363 atatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatac 462  Q
    |||||||| |||||||||| |||  |||||||||||||| |||| || ||| ||||| |||||||||||| || | ||  |||||||||| |||| | ||    
T  40145403 atatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 40145502  T
Q  463 tttctcttt 471  Q
    |||||||||    
T  40145503 tttctcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 471
Target Start/End: Complemental strand, 42414404 - 42414298
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||    |||||||||||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | ||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 42414305  T
Q  465 tctcttt 471  Q
    | |||||    
T  42414304 tatcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 33825424 - 33825359
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||| ||||| |||| |||| |||||||||||||| || | |||||||||||||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgaca 33825359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 430
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  371 tatgatacataaacatacttaggtggcaatata-cccattgacacccacataaaaatctga 430  Q
    ||||||||||| |||| |||||||||||||| | |||||||||||||||| ||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 36733042 - 36732938
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||||| |||||| |||| |||||||||||| ||||||||||||  | | ||  |||||||||| |||| | ||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  467 tcttt 471  Q
    |||||    
T  36732942 tcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 471
Target Start/End: Complemental strand, 33149741 - 33149634
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||| ||||| || | ||  |||| ||||| |||| | |||    
T  33149741 tatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 33149642  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  33149641 ttctcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 31008988 - 31009102
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||| ||||| |  | |  ||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 31009087  T
Q  467 tctttcttcttctct 481  Q
    | |||| ||||||||    
T  31009088 tatttcctcttctct 31009102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 432
Target Start/End: Original strand, 35785198 - 35785264
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    ||||| |||||||||| |||  |||||||||||||| |||  |||||||||||| ||||||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 35785264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 35943992 - 35943927
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    ||||||||||||||| |||  |||||||||||||| | |  |||||||||||| ||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgaca 35943927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 470
Target Start/End: Original strand, 13811659 - 13811755
Alignment:
Q  374 gatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 470  Q
    |||||||| |||  |||||||||||||| | |  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||||||    
T  13811659 gatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 9603813 - 9603896
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 450  Q
    |||| |||||||||| |||| ||||||||  |||| || |||| ||||| ||| ||||||||||||  ||| ||||||||||||    
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggacccc 9603896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaat 426  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 4e-42; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 15508125 - 15508010
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  15508025 ctctttcttcttctct 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 15990142 - 15990028
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  15990042 tctttcttcttctct 15990028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 30341460 - 30341346
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  30341360 tctttcttcttctct 30341346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 366 - 481
Target Start/End: Original strand, 4231547 - 4231662
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||||||||| |||||||||  ||||||||||||| |||| ||| |||||||| |||||||||||| ||||||||||||||||||| |||||| |||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  4231647 ctctttcttcttctct 4231662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 31976248 - 31976352
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| ||||||||||||||||||| || ||||||||| |||||||||||| |||| || ||| ||||||| |||| | ||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  467 tcttt 471  Q
    |||||    
T  31976348 tcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 365 - 481
Target Start/End: Complemental strand, 31953132 - 31953016
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||| ||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||  ||| |||||| | | |||  | ||||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactt 31953033  T
Q  465 tctctttcttcttctct 481  Q
    |||||||| ||||||||    
T  31953032 tctctttcatcttctct 31953016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 364 - 471
Target Start/End: Original strand, 32869675 - 32869782
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||| | |||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||    
T  32869675 tatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32869774  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  32869775 ttctcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 28536581 - 28536474
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    ||||||||||||||| |||||||||||||| | || |||||||||||| ||||||||||||   || ||| |||||||| | |||| | |||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcacactttctcttt 28536484  T
Q  472 cttcttctct 481  Q
      ||||||||    
T  28536483 tatcttctct 28536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 31110859 - 31110757
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| |||||||||||||| |||| ||||||| |||  |||||||||||| ||  ||| |||||||| || |||| | ||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  467 tcttt 471  Q
    |||||    
T  31110761 tcttt 31110757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 12732482 - 12732553
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggc 438  Q
    |||| |||||||||| |||| |||| |||||||||||  |||||||||||||| |||||||||||| |||||    
T  12732482 gagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggc 12732553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 471
Target Start/End: Complemental strand, 22880753 - 22880654
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| |||| ||||||| || | ||  |||||||||| |||| | |||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 17598552 - 17598658
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  |||||||||||||| | |  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  465 tctcttt 471  Q
    |||||||    
T  17598652 tctcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 471
Target Start/End: Original strand, 11427639 - 11427722
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||||||| | || |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | |||||||||||    
T  11427639 cttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 471
Target Start/End: Complemental strand, 31109479 - 31109396
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||||||| |||| |||||| ||||| |||||||||||| || | ||  | ||||||||  ||||| |||||||||||    
T  31109479 cttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttt 31109396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 481
Target Start/End: Original strand, 30870058 - 30870128
Alignment:
Q  411 acacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    ||||||| |||||||||| |||||||| || ||||||||||| |||| | | |||||||||| ||| ||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctct 30870128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 4e-42; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 45058653 - 45058539
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatacttt 45058555  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  45058554 ctctttcttcttctct 45058539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 389 - 481
Target Start/End: Complemental strand, 36331407 - 36331315
Alignment:
Q  389 ttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    ||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 36331315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 360 - 481
Target Start/End: Original strand, 42823104 - 42823225
Alignment:
Q  360 attatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagta 459  Q
    |||||| || ||||||||||||||||   ||| |||| |||| |||| |||||||||||| |||||| |||||||||| ||||||||||||||  |||||    
T  42823104 attataggaattatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagta 42823203  T
Q  460 tactttctctttcttcttctct 481  Q
    ||||||||||||||| ||||||    
T  42823204 tactttctctttcttattctct 42823225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 14623939 - 14623825
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||  ||| |||||| | | |||| | ||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||||||||    
T  14623839 tctttcatcttctct 14623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 41189864 - 41189760
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| |||||||||||||| | |  ||||||||||||||||||| ||||| ||||||| ||||||||||| |||| | ||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  467 tcttt 471  Q
    |||||    
T  41189764 tcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 364 - 471
Target Start/End: Complemental strand, 26141635 - 26141528
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    |||||||||||||||||| |||| |||||||||||||| |||| || ||||||||| |||||||||||| |||| || ||||||||| | |||| | |||    
T  26141635 tatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacact 26141536  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  26141535 ttctcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 13898150 - 13898041
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||| |||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |||  ||| |||||| | | |||| | |||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  472 cttcttctct 481  Q
    | ||||||||    
T  13898050 catcttctct 13898041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 471
Target Start/End: Original strand, 53982006 - 53982115
Alignment:
Q  362 tatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtata 461  Q
    ||||||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |    
T  53982006 tatatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T
Q  462 ctttctcttt 471  Q
    ||||||||||    
T  53982106 ctttctcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 471
Target Start/End: Complemental strand, 20765016 - 20764911
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    |||||||||| ||||| |||| ||||||||| |||| || | || ||||||||| |||||||||||| ||||||| ||||||||||  |||| | |||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  466 ctcttt 471  Q
    ||||||    
T  20764916 ctcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 11348022 - 11347918
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| |||||||| ||||| | || |||||| ||||| |||||||||||| ||||||| |||||||| ||  ||| | ||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  467 tcttt 471  Q
    |||||    
T  11347922 tcttt 11347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| ||||| |||||||| |||  || ||| ||||| || ||||||||| ||||||||||| ||||||| |||| | ||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  467 tcttt 471  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 51419460 - 51419356
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| ||||| || ||||| | || || ||||||||| |||||||||||| ||||||| || |||||||| |||| | ||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  467 tcttt 471  Q
    |||||    
T  51419360 tcttt 51419356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 26754698 - 26754809
Alignment:
Q  370 ttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctct 469  Q
    ||||||| |||| |||  |||||||||||||| |||| | |||| ||||| ||||||||||||||||| || ||||||||||| |||| | | |||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  470 ttcttcttctct 481  Q
    ||| ||| ||||    
T  26754798 ttcctctcctct 26754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 8076393 - 8076507
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| ||||||||||||||  ||||||||||| || |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | ||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  8076493 tctttcctctcctct 8076507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 471
Target Start/End: Original strand, 33644199 - 33644304
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  ||| |||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  466 ctcttt 471  Q
    ||||||    
T  33644299 ctcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 11907371 - 11907475
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||  |||||||| ||||| || | |  |||| |||| ||||||||||||||||| |||||||||||||| |||| | | ||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  467 tcttt 471  Q
    |||||    
T  11907471 tcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 471
Target Start/End: Original strand, 52629304 - 52629404
Alignment:
Q  371 tatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 470  Q
    ||||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  471 t 471  Q
    |    
T  52629404 t 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 27714991 - 27714888
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||   |||||||| |||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | ||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  467 tctt 470  Q
    ||||    
T  27714891 tctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 31456694 - 31456793
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  | |||| ||||||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | |||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 471
Target Start/End: Complemental strand, 48587170 - 48587087
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||||||| |||| |||||||| |||||||||||||||| || | ||  |||| ||||| |||||| |||||||||||    
T  48587170 cttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 449
Target Start/End: Complemental strand, 24700054 - 24699972
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccc 449  Q
    |||| |||||||||| |||| ||||| |||||||| |||  |||||||||||||||||||||| || |||||||  |||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccc 24699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 25395429 - 25395319
Alignment:
Q  371 tatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 470  Q
    |||||||||||||||| |||| ||||| ||| | || || | ||||||| |||||||||||||||||| |||| |||||| | |||  | | ||||||||    
T  25395429 tatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctt 25395330  T
Q  471 tcttcttctct 481  Q
    || ||||||||    
T  25395329 tcatcttctct 25395319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 35536626 - 35536740
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||| ||||||||| |||  ||||||||||||||||||| ||||| |||| ||| ||||||   | |||| | |||| |    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcc 35536725  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||||||||    
T  35536726 tctttcatcttctct 35536740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 11095453 - 11095388
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 11095388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 49607414 - 49607479
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 49607479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 8956762 - 8956876
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||| ||||||||| | || ||||||||||||||||||| ||||| |||  ||| ||||||   | |||| | |||| |    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttcc 8956861  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||||||||    
T  8956862 tctttcatcttctct 8956876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 36331478 - 36331408
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 437  Q
    |||||||||||||||||||  ||||| |||||||  |||| |||||| ||||| ||||||||| |||||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtgg 36331408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 33118951 - 33118886
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    ||||||||||||||| |||  |||||||| ||||| |||| |||||||||||| |||||| |||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgaca 33118886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 54868995 - 54868930
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||||||||| ||||||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 54868930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 472
Target Start/End: Complemental strand, 30801828 - 30801728
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  ||||||||  |||| |||| |||| ||||||| |||||| |||||||| | |||||||||||| | |||| | | |||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  472 c 472  Q
    |    
T  30801728 c 30801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 25407243 - 25407133
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccaca-taaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctt 470  Q
    |||||||||| |||  | ||||||||||||||||| ||||||| ||||  |||||||||||| |||  |||||||| ||| | |||  | ||||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctt 25407144  T
Q  471 tcttcttctct 481  Q
    || ||| ||||    
T  25407143 tcatctcctct 25407133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 437
Target Start/End: Complemental strand, 35965874 - 35965804
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 437  Q
    |||| |||||||||| |||| |||| |||  |||| | || ||||||||||||||||||||||||| ||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg 35965804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 17470405 - 17470509
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||   ||||||||||||| |||  || ||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  467 tcttt 471  Q
    |||||    
T  17470505 tcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 50591101 - 50590986
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  50591001 ctctttcttcttctct 50590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 41608594 - 41608479
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||  |||||| |||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  41608494 ctctttcttcttctct 41608479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 47748441 - 47748556
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||||||||| |  |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  465 tctctttcttcttctct 481  Q
    |||||||||||||||||    
T  47748540 tctctttcttcttctct 47748556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 5959100 - 5958986
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||| ||||||||| |||  |||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  5959000 tctttcttcttctct 5958986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 408 - 481
Target Start/End: Complemental strand, 44332430 - 44332357
Alignment:
Q  408 ttgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  44332430 ttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctctttcttcttctct 44332357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 32813247 - 32813351
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| |||||||||||||| |||| || ||||||||| |||||||||||| |||| || ||||||||||| |||| | ||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  467 tcttt 471  Q
    |||||    
T  32813347 tcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 37926538 - 37926424
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| | ||  ||||||||||||| | |  || |||||||||||||||||||||| ||||||| ||||| ||||  |||||| ||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  467 tctttcttcttctct 481  Q
    |||||  ||||||||    
T  37926438 tcttttctcttctct 37926424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| ||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  467 tcttt 471  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 364 - 471
Target Start/End: Complemental strand, 27564838 - 27564731
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||| |||||||||| |||| |||||||||||||| |||  |||||||||||| |||||||||||| ||   ||  |||||||||| |||| | |||    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  27564738 ttctcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 45044660 - 45044546
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |  | |||||||||||||| |||  |||||||||| | ||||||||||||||| |||| ||||||||||| |||  | | ||||    
T  45044660 gagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttc 45044561  T
Q  467 tctttcttcttctct 481  Q
    |||||  ||||||||    
T  45044560 tcttttctcttctct 45044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 471
Target Start/End: Complemental strand, 9474977 - 9474872
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||  | |||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  466 ctcttt 471  Q
    ||||||    
T  9474877 ctcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 471
Target Start/End: Complemental strand, 49811632 - 49811523
Alignment:
Q  362 tatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtata 461  Q
    |||| ||||||||||| ||| |||| |||||||| ||||| |||  |||||| ||||| |||||||||||| || ||||||| ||| |||| |||| | |    
T  49811632 tataagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T
Q  462 ctttctcttt 471  Q
    ||||||||||    
T  49811532 ctttctcttt 49811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 2581915 - 2582015
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  467 t 467  Q
    |    
T  2582015 t 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 38595154 - 38595258
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| ||||||||||||||   ||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  467 tcttt 471  Q
    |||||    
T  38595254 tcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 471
Target Start/End: Original strand, 26440727 - 26440838
Alignment:
Q  360 attatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagta 459  Q
    |||| |||||||| |||| ||| |||| ||||| || ||||| |||| || ||||||||| |||||||||||| ||||||| ||||| |||||  ||| |    
T  26440727 attaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagca 26440826  T
Q  460 tactttctcttt 471  Q
     |||||||||||    
T  26440827 cactttctcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 51898783 - 51898669
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| ||||  ||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  467 tctttcttcttctct 481  Q
    | |||| ||| ||||    
T  51898683 tatttcctctcctct 51898669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 440
Target Start/End: Complemental strand, 23597191 - 23597118
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggcca 440  Q
    |||| |||||||||| ||||  ||||||||||||| || | |||| |||||||||||||||||||| |||||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggcca 23597118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 6260868 - 6260984
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||| ||| | || ||||||||| |||| |||| |  |||||||||||||||||| |||||||| ||  ||||||||||  ||| | | ||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattt 6260967  T
Q  465 tctctttcttcttctct 481  Q
    ||| |||||||| ||||    
T  6260968 tctatttcttctcctct 6260984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 437
Target Start/End: Original strand, 37649196 - 37649268
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 437  Q
    |||||| |||||||||| ||||  ||||||||||||| || | |||||||||||| |||||||||||| ||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtgg 37649268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 471
Target Start/End: Complemental strand, 44548471 - 44548372
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| ||||  ||||||||||||| |||  |||| ||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 3302636 - 3302550
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 450  Q
    ||||||| |||||||||| |||| |||||||| |||||||  | | |||||||||| |||||||||||| ||   ||||||||||||    
T  3302636 tatgagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggacccc 3302550  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 7740733 - 7740847
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||  |||  |||| ||| ||||| | ||||||||||| |||||||||| ||||| ||||| || |||||||| | ||| |||| ||||    
T  7740733 gagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaatatattttc 7740832  T
Q  467 tctttcttcttctct 481  Q
    | |||| ||| ||||    
T  7740833 tttttcatctcctct 7740847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 471
Target Start/End: Complemental strand, 47452422 - 47452316
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  ||||||||| |||| |||| |||||||||||| |||||||| ||| || | ||  |||| ||||| |||| | ||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  465 tctcttt 471  Q
    |||||||    
T  47452322 tctcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 366 - 471
Target Start/End: Complemental strand, 48716383 - 48716278
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  |||||||||||||| |||  |||||| ||||| |||||||||||| || | ||  |||||||||| |||| | |||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T
Q  466 ctcttt 471  Q
     |||||    
T  48716283 atcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 471
Target Start/End: Complemental strand, 8346466 - 8346384
Alignment:
Q  389 ttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    ||||||||||||| |||  |||||||||||| |||||||||||| || | ||  ||||||| || |||| | |||||||||||    
T  8346466 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctcttt 8346384  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 471
Target Start/End: Original strand, 41758832 - 41758909
Alignment:
Q  394 tggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||| |||| |||||| ||||| |||||||||||| || | || ||||||||||| |||  | |||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttt 41758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||| | ||||| | || |||||||||||| |||||||||||| || | ||  ||||| |||| |||| | ||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  467 tcttt 471  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 38632421 - 38632317
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||  || ||| ||||| |||||||||||| || | ||  |||||||||| |||| | |||||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  467 tcttt 471  Q
    |||||    
T  38632321 tcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 50630458 - 50630562
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| | |  |||||||||||||| | || |||  ||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  467 tcttt 471  Q
    |||||    
T  50630558 tcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 8343263 - 8343149
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  8343163 tctttcttcttctct 8343149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 19670816 - 19670702
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  19670716 tctttcttcttctct 19670702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 55475191 - 55475305
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||  ||||| ||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttc 55475290  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  55475291 tctttcttcttctct 55475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 367 - 480
Target Start/End: Original strand, 32766958 - 32767071
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||| | ||||||||||||||||||||||||||||| || |||||| ||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  467 tctttcttcttctc 480  Q
    ||||||||||||||    
T  32767058 tctttcttcttctc 32767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 29548059 - 29547945
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||||||||| | || |||||||||||| |||||||||||||||||||||||||| |||||  ||||| |||||     
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttt 29547960  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  29547959 tctttcttcttctct 29547945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 47986208 - 47986322
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| | || |||||| ||||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  467 tctttcttcttctct 481  Q
    |||||||| ||||||    
T  47986308 tctttcttattctct 47986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 50813992 - 50813878
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  ||||||||| |||| |||| |||||||||||| ||||||||||||||||| |||||| ||||||| |||||| ||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  50813892 tctttcttcttctct 50813878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 17983822 - 17983729
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  17983822 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 17983729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 55079814 - 55079699
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatgga-ccccgcgcaagtatacttt 465  Q
    |||||||||||||||||||  |||||||||||||| |||  |||||||||| | |||||||||||||||||||||||||| |||| | |||||| |||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  55079714 ctctttcttcttctct 55079699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 364 - 481
Target Start/End: Complemental strand, 18924598 - 18924481
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||||||||| |||||| |  |||||||||||||| |||| |||| | ||||| |||||||||||||||||| ||||| || |||| |||||| |||    
T  18924598 tatgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacact 18924499  T
Q  464 ttctctttcttcttctct 481  Q
    ||||||||||||||||||    
T  18924498 ttctctttcttcttctct 18924481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 375 - 481
Target Start/End: Complemental strand, 29589831 - 29589726
Alignment:
Q  375 atacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttctt 474  Q
    |||||||||||  ||||| || ||||| |||| |||||||||||| |||||||||| ||||||||||||||||||| | |||||| ||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttctt 29589733  T
Q  475 cttctct 481  Q
    |||||||    
T  29589732 cttctct 29589726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 44536845 - 44536732
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||   ||||||||||||| |||| |||||| ||||| ||||||||||||||||| ||||| |||||| |  ||||| ||||||    
T  44536845 gagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttc 44536747  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  44536746 tctttcttcttctct 44536732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 11511563 - 11511448
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||| || | ||  |||||||||| |||| | |||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  466 ctctttcttcttctct 481  Q
    ||||||  ||||||||    
T  11511463 ctcttttctcttctct 11511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 50052528 - 50052414
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  50052428 tctttcctctcctct 50052414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 471
Target Start/End: Original strand, 31910191 - 31910296
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    |||||||||||||||| |||| |||||||| ||||| || | |||||||||||| ||||||||||||  | |||| ||||||||||| |||| | |||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  466 ctcttt 471  Q
    ||||||    
T  31910291 ctcttt 31910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 471
Target Start/End: Original strand, 6034043 - 6034148
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  |||||||||||||| |||| |||||||||||| ||||||||||||||| | ||  |||| ||||| |||| | |||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  466 ctcttt 471  Q
    ||||||    
T  6034143 ctcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 390 - 481
Target Start/End: Original strand, 29977908 - 29977999
Alignment:
Q  390 taggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    |||||||||||| |||| || ||||||||| |||||||||||| || | |||||||||||| | |||| | |||||||||||| ||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttctct 29977999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 40574777 - 40574844
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    ||||||||||||||||| |||| ||||||||| |||| |||| |||||||||||| ||||||||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 471
Target Start/End: Complemental strand, 48183154 - 48183045
Alignment:
Q  362 tatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtata 461  Q
    |||| |||| |||||||||| |||  |||| ||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |    
T  48183154 tataagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T
Q  462 ctttctcttt 471  Q
    ||||||||||    
T  48183054 ctttctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 50526272 - 50526201
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtgg 437  Q
    ||||| |||||||||| ||||  ||||||||||||| |||| |||||||||||| |||||||||||| ||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtgg 50526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 480547 - 480443
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||| ||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||  |||| | ||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  467 tcttt 471  Q
    |||||    
T  480447 tcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||| ||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  467 tcttt 471  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 48647826 - 48647712
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||| |||||||||| |||||||  ||||| |||  || |||||||||||||||||| ||| |||| ||  ||||| |||| |||| | | ||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  48647726 tctttcctctcctct 48647712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 42044467 - 42044363
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| | || |  ||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  467 tcttt 471  Q
    |||||    
T  42044367 tcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 3481652 - 3481719
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||||| |||||||||| |||   ||||||||||||| || | |||||||||||| ||||||||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgaca 3481719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 471
Target Start/End: Complemental strand, 24995186 - 24995103
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    ||||| |||||||| |||| ||||||||||||||||||| ||||| || | ||  |||||||||| |||| | | |||||||||    
T  24995186 cttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 29239886 - 29240000
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||  |||||| ||||| |||||||| ||| || | ||  |||||||| | |||| | ||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  29239986 tctttcctctcctct 29240000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 471
Target Start/End: Complemental strand, 54473634 - 54473529
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  |||||||| ||||| |||  |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | |||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T
Q  466 ctcttt 471  Q
     |||||    
T  54473534 atcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 29234345 - 29234241
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||| |||||||| |||| |||| |||  || |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  467 tcttt 471  Q
    |||||    
T  29234245 tcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 41823926 - 41823986
Alignment:
Q  411 acacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    ||||||||| |||||||||||| || | || ||||||||||| |||| | |||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttt 41823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 1e-39; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 32564527 - 32564412
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  466 ctctttcttcttctct 481  Q
    ||||||||||||||||    
T  32564427 ctctttcttcttctct 32564412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 22343361 - 22343475
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  22343461 tctttcttcttctct 22343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 41915741 - 41915855
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  41915841 tctttcttcttctct 41915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 38044197 - 38044311
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||||||||||||| |||| |||||| ||||| ||||||||||||||| |||||||||||||||| |||||| ||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  38044297 tctttcttcttctct 38044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 8238210 - 8238327
Alignment:
Q  365 atgagttatgatacataaacatact-taggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    |||||||||||||||||||||  || |||||||||||| |||| |||||||||||| ||||||||||||||| | |||||||||||||| |||||| |||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  464 ttctctttcttcttctct 481  Q
    ||||||||||||||||||    
T  8238310 ttctctttcttcttctct 8238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 7727906 - 7728020
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  ||||||||| |||| |||  ||||||  |||||||||||||||||||||| |||||||||||||| |||||| ||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  467 tctttcttcttctct 481  Q
    | |||||||||||||    
T  7728006 tgtttcttcttctct 7728020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 40846213 - 40846099
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||| ||||| |||||||| |||||| |  ||||||||||||| ||| || ||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  40846113 tctttcttcttctct 40846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 457
Target Start/End: Original strand, 26296644 - 26296734
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 457  Q
    ||||||||||||||| |||| |||||||| |||||||||| || ||| |||||||||||||||| | ||||||||||||||||||| ||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaag 26296734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 471
Target Start/End: Original strand, 35522877 - 35522980
Alignment:
Q  368 agttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttct 467  Q
    |||||||||||||| |||| |||| ||||||||| |||  || ||||||||| |||||||||||| ||||||||||||| ||||| |||| | |||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  468 cttt 471  Q
    ||||    
T  35522977 cttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 367 - 457
Target Start/End: Complemental strand, 46374902 - 46374812
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 457  Q
    ||||||||||||||| |||| |||||||||||| | |||| || ||||||||| |||||||||||| ||||||| ||||||||||| ||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaag 46374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 46033901 - 46033797
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| | || |||||||||||||| |||| || |||||||||||||||||||||| |||| || ||| || |||| |||| ||| ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  467 tcttt 471  Q
    |||||    
T  46033801 tcttt 46033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 8080483 - 8080379
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||| |||||||||||||||| || | ||  |||||||||| |||| | ||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  467 tcttt 471  Q
    |||||    
T  8080383 tcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 19329840 - 19329946
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||| |||||||||||||| |||  |||||||||||| |||||||||||| ||   ||  |||||||||| |||| | ||||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 19329939  T
Q  465 tctcttt 471  Q
    |||||||    
T  19329940 tctcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 365 - 470
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||||||| |||| |||||||| ||||| |||| ||||||| |||| |||||| ||||| || |||| ||| ||||||| |||| | | ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  465 tctctt 470  Q
    ||||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 3434562 - 3434666
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||||||||| |||| |||||||||||| ||||| |||||| || | ||  |||| ||||| |||| | ||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  467 tcttt 471  Q
    |||||    
T  3434662 tcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 7389389 - 7389493
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| || | |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  467 tcttt 471  Q
    |||||    
T  7389489 tcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 36208173 - 36208287
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||  ||||||||| |||| |  |||||||||||||| ||||| ||||||||||| ||  ||||||| || |||| | | ||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  36208273 tctttcctctcctct 36208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 35468955 - 35468850
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| ||||| |||||||| | |  ||||||||||||||||||||| | ||||| |||| ||||||| || |||  | ||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttc 35468856  T
Q  467 tctttc 472  Q
    ||||||    
T  35468855 tctttc 35468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 471
Target Start/End: Original strand, 38267039 - 38267144
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatacttt 465  Q
    ||||| |||||||||| |||  |||| ||| ||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  466 ctcttt 471  Q
    ||||||    
T  38267139 ctcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 36362013 - 36361909
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| | || |||||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  467 tcttt 471  Q
    |||||    
T  36361913 tcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 19436287 - 19436173
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||||||| ||||| |||  |||||||||||| |||||||||||| || | ||  |||| |||||  ||| | ||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  467 tctttcttcttctct 481  Q
    |||||  ||||||||    
T  19436187 tcttttctcttctct 19436173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 35137531 - 35137637
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||| ||| |||  |||||||||||||| |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||  | ||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  465 tctcttt 471  Q
    |||||||    
T  35137631 tctcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 36362026 - 36362130
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||||||| |||| | || |||||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  467 tcttt 471  Q
    |||||    
T  36362126 tcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 38837217 - 38837321
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| |  ||||| ||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  467 tcttt 471  Q
    |||||    
T  38837317 tcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 438
Target Start/End: Complemental strand, 39256024 - 39255952
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggc 438  Q
    |||||||||||||||| |||  |||||||||||||| |||  |||| ||||| | |||||||||||| |||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtggc 39255952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 3784000 - 3784099
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  |||||||||||||| | |  |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | |||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 18207180 - 18207251
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggc 438  Q
    ||||||||||||||| |||  |||||||||||||| |||  |||||||||| | |||||||| ||| |||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtggc 18207251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 419
Target Start/End: Original strand, 31735882 - 31735936
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccaca 419  Q
    ||||||||||||||||| |||| |||||||||||||| || | || |||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccaca 31735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 32045842 - 32045920
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggacccc 450  Q
    |||||||||| | || ||||||||||||||||    | ||||||||||||||||||||||| ||  |||||| ||||||    
T  32045842 atgatacatatatattcttaggtggcaatatattactggacacccacataaaaatctgacacgtaaccatatagacccc 32045920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 40957707 - 40957772
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||| |||||||||| |||  |||||||||||||| || | |||| ||||||| ||||||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgaca 40957772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 472
Target Start/End: Complemental strand, 2318338 - 2318238
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    ||||||||| ||||  | |||||||||| | |||  |||||||||||| ||||||||||| ||||| ||  |||||||  |  ||| |||||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  472 c 472  Q
    |    
T  2318238 c 2318238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 4999614 - 4999510
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||| |||||||| |||  |||||||||||| |||||||||| | || | ||  |||||||||| |||  | ||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  467 tcttt 471  Q
    |||||    
T  4999514 tcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 4e-39; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 45097835 - 45097721
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||| |||||||||||||| | || |||||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  45097735 tctttcttcttctct 45097721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 365 - 481
Target Start/End: Original strand, 43490119 - 43490235
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||||||||||||||||||  |||||||| ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  465 tctctttcttcttctct 481  Q
    | |||||||||||||||    
T  43490219 tatctttcttcttctct 43490235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 13365351 - 13365467
Alignment:
Q  367 gagttatgatacataaacatac--ttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||||||||| ||  |||| ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||    
T  13365351 gagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactt 13365450  T
Q  465 tctctttcttcttctct 481  Q
    |||||||||||||||||    
T  13365451 tctctttcttcttctct 13365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 388 - 481
Target Start/End: Complemental strand, 2997566 - 2997473
Alignment:
Q  388 cttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  2997566 cttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 2997473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 38732354 - 38732468
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||||||  |||| ||| ||||| | || |||||||||||| ||||||||||||||||| |||||||||||||| |||||| ||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  467 tctttcttcttctct 481  Q
    |||||||||||||||    
T  38732454 tctttcttcttctct 38732468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 365 - 471
Target Start/End: Complemental strand, 40614004 - 40613898
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    ||||||||||||||||| |||| |||||||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||||||| |||| | ||||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactt 40613905  T
Q  465 tctcttt 471  Q
    |||||||    
T  40613904 tctcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 42257193 - 42257297
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| ||||  ||||||||||||| | |  ||||||||||||||||||||||||| ||||||| ||||||||||| |||| | ||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  467 tcttt 471  Q
    |||||    
T  42257293 tcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 3035029 - 3034969
Alignment:
Q  421 aaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  3035029 aaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttcttcttctct 3034969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 471
Target Start/End: Complemental strand, 38273251 - 38273138
Alignment:
Q  358 aaattatatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 457  Q
    |||||| | ||||||||||||||| |||| ||||| |||||||| |||| || ||||||||| |||||||||||| || |||| ||||||||||| | ||    
T  38273251 aaattaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactag 38273152  T
Q  458 tatactttctcttt 471  Q
     | |||||||||||    
T  38273151 cacactttctcttt 38273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 9058480 - 9058584
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||| |||||||||| |||| | ||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  467 tcttt 471  Q
    |||||    
T  9058580 tcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 5574588 - 5574484
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  467 tcttt 471  Q
    |||||    
T  5574488 tcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 36168836 - 36168940
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| ||||| || ||||| | || || || |||||| |||||| ||||| ||||||| ||||||||||| |||| ||||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  467 tcttt 471  Q
    |||||    
T  36168936 tcttt 36168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 471
Target Start/End: Original strand, 28863460 - 28863559
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||||| |||| | |||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 441
Target Start/End: Complemental strand, 15428840 - 15428766
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccat 441  Q
    |||||||||||||||||||| |||| ||||| ||| |||| || |||| |||| |||||||||||||||||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccat 15428766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 481
Target Start/End: Complemental strand, 26891604 - 26891490
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||||||||||||||  ||  |||||||||||||| |||| | |||||||||| ||||||||||||||||| ||  |||||| ||  |||| | | ||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||||||||    
T  26891504 tctttcctcttctct 26891490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 33436200 - 33436095
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||||||||| |||||||| ||| || | ||  |||||||||| |||| | ||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  467 tctttc 472  Q
    ||||||    
T  33436100 tctttc 33436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 33436211 - 33436316
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| ||||| |||||||| |||  ||||||||||||||||||||||||| ||| |||| |||||   || |||| | ||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttc 33436310  T
Q  467 tctttc 472  Q
    ||||||    
T  33436311 tctttc 33436316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 17820105 - 17820034
Alignment:
Q  366 tgagttatgatacataaacatact-taggtggcaatatacccattgacacccacataaaaatctgacatgtgg 437  Q
    |||||||||||||||| ||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||    
T  17820105 tgagttatgatacatagaca-actataggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 17820034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 30915463 - 30915567
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||||||||| |||| ||||| ||||||||||||||||||| || | ||  |||||||||  |||| | ||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  467 tcttt 471  Q
    |||||    
T  30915563 tcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 471
Target Start/End: Complemental strand, 19930915 - 19930816
Alignment:
Q  372 atgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctcttt 471  Q
    |||||||||| |||  |||||||||||||| |||| |||||| ||||| |||||||||||| || | ||| |||||||||| |||  | |||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 471
Target Start/End: Complemental strand, 28381758 - 28381651
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||| |||||||||| |||  |||||||||||||| |||  | |||||||||| |||||||||||| || | || |||||| |||| |||| | |||    
T  28381758 tatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacact 28381659  T
Q  464 ttctcttt 471  Q
    ||||||||    
T  28381658 ttctcttt 28381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 13438341 - 13438447
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  |||||||| ||||| | || |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  465 tctcttt 471  Q
    |||||||    
T  13438441 tctcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 2533124 - 2533227
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    ||||||||||||||| |||| |||| ||||||||| | || |||||| ||||| |||||||||||| || |||| || |||||||| |||| | |||||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  467 tcttt 471  Q
    |||||    
T  2533223 tcttt 2533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 7465835 - 7465731
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||| |||||||| |||| |||||||||||| |||||||||||| || | ||  |||||||| | |||| | ||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  467 tcttt 471  Q
    |||||    
T  7465735 tcttt 7465731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Complemental strand, 10249482 - 10249378
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||| ||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  467 tcttt 471  Q
    |||||    
T  10249382 tcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  ||||| |||||||| |||| |||||||||||| |||||||||||| || | ||  |||| ||||| |||| | ||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  467 tcttt 471  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 481
Target Start/End: Original strand, 20700815 - 20700929
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||| |||| ||||||||| |||| ||||| || ||| |||||||||||| || | ||  ||||||||||  ||| | ||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  467 tctttcttcttctct 481  Q
    |||||| ||| ||||    
T  20700915 tctttcctctcctct 20700929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 432
Target Start/End: Original strand, 40701477 - 40701543
Alignment:
Q  366 tgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    ||||| |||||||||| |||  |||||||||||||| |||  |||||||||||| ||||||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgaca 40701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 473
Target Start/End: Original strand, 27864702 - 27864810
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| |||  |||| ||||||||| |||| |||||| ||||| |||||||||||| ||   ||  ||||||||||  ||| | ||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  465 tctctttct 473  Q
    |||||||||    
T  27864802 tctctttct 27864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 32505748 - 32505648
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttc 466  Q
    |||| |||||||||| |||  |||||||| ||||| |||  |||||||||||| |||||||||||| || | ||  |||||||||| |||| | ||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  467 t 467  Q
    |    
T  32505648 t 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 457
Target Start/End: Original strand, 3737986 - 3738033
Alignment:
Q  410 gacacccacataaaaatctgacatgtggccatatggaccccgcgcaag 457  Q
    |||||||||| ||||||||||||||||| ||| |||||||||| ||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaag 3738033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 38882913 - 38882849
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    |||| |||||||||| |||  |||||||||||||| |||| |||||| ||||| ||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgaca 38882849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 392 - 481
Target Start/End: Original strand, 152523 - 152612
Alignment:
Q  392 ggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactttctctttcttcttctct 481  Q
    |||||||||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||| ||| || |||||||||||||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctct 152612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 364 - 483
Target Start/End: Original strand, 17055 - 17170
Alignment:
Q  364 tatgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatact 463  Q
    ||||||||||||| |||| |||||    ||| |||||| | || | |||| ||||| ||||||||||||||||| || ||||||||||| |||| | | |    
T  17055 tatgagttatgattcatagacata----ggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacatt 17150  T
Q  464 ttctctttcttcttctctct 483  Q
    ||||||||| ||||||||||    
T  17151 ttctctttcctcttctctct 17170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 10209 - 10144
Alignment:
Q  367 gagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgaca 432  Q
    ||||||||||||||| |||   ||||||||||||| | || |||||| ||||||||||||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgaca 10144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 481
Target Start/End: Complemental strand, 1031 - 915
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| ||||  ||||||||||||| |||| || ||| ||||| ||||| |||||| || | ||  || | ||||| |||| | ||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  465 tctctttcttcttctct 481  Q
    |||||||| ||| ||||    
T  931 tctctttcctctcctct 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 481
Target Start/End: Complemental strand, 1031 - 915
Alignment:
Q  365 atgagttatgatacataaacatacttaggtggcaatatacccattgacacccacataaaaatctgacatgtggccatatggaccccgcgcaagtatactt 464  Q
    |||||| |||||||||| ||||  ||||||||||||| |||| || ||| ||||| ||||| |||||| || | ||  || | ||||| |||| | ||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  465 tctctttcttcttctct 481  Q
    |||||||| ||| ||||    
T  931 tctctttcctctcctct 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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