View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16765_high_17 (Length: 271)
Name: NF16765_high_17
Description: NF16765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16765_high_17 |
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Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 29727038 - 29727294
Alignment:
| Q |
1 |
tgagtttgtatctgagtgatcccccgatgaacatggttagtagtagtagctgtctttagtagtagtggcatgggaagtgttaaggaaaacatgttagtga |
100 |
Q |
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| T |
29727038 |
tgagtttgtatctgagtgatcccccgatgaacatggttagtagtaatagctgtctttagtagtagtggcatgggaagtgttaaggaaaacatgttagtaa |
29727137 |
T |
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| Q |
101 |
taatgtgaatatggttagtgataacgatttggctaatgtgggaaatggaaggtggttattgttattacgtag--taatgtagtttagtaggatgtcttat |
198 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
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| T |
29727138 |
taatgtgaatatggttagggataacgatttggctaatgtgggaaatggaaggtggttattgtttttacgtagtataatgtagtttagtaggatgtcttat |
29727237 |
T |
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| Q |
199 |
ttataattaaaaaatgtgttgttgaaacttgattggttgtgctgtaccgtagaaatt |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29727238 |
ttataattaaaaaatgtgttgttgaaacttgattggttgtgctgtaccgtagaaatt |
29727294 |
T |
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