View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16766_high_15 (Length: 266)
Name: NF16766_high_15
Description: NF16766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16766_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 47201354 - 47201121
Alignment:
| Q |
14 |
aagaaaatgtgcatatgatgctagaacataactgtaacaacaccaaaagaatcatttcattaattcattatttttcacggatataacaagaattttagca |
113 |
Q |
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| T |
47201354 |
aagaaaatgtgcatatgatgctagaacataactgtaacaacaccaaaagaatcatttcattaattcattatttttcacggatataacaagaattttagca |
47201255 |
T |
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| Q |
114 |
tatgaaactttgcttgaaatgaattattaccagtcatcaggagctgctttaactgcttgatcaaaatatgtctcagcacgaggagcatccttatgacact |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47201254 |
tatgaaactttgcttgaaatgaattattaccagtcatcaggagctgctttaactgcttgatcaaaatatgtctcagcacgaggagcatccttatgacact |
47201155 |
T |
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| Q |
214 |
cccatatcaaatctgcgtaaagtgataaaacgtt |
247 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
47201154 |
cccatatcaaatctgcgtaaagtgataaaacgtt |
47201121 |
T |
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