View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16766_high_19 (Length: 223)
Name: NF16766_high_19
Description: NF16766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16766_high_19 |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 10 - 204
Target Start/End: Complemental strand, 6224933 - 6224738
Alignment:
| Q |
10 |
gagaagaaaagagagggggaccaaagtccaaagcatctgcttatttctcaataacatgcgtgaattaaagtgactcaattcaaaagcacttaaaatagtg |
109 |
Q |
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| T |
6224933 |
gagaagaaaagagagggggaccaaagtccaaagcatctgcttatttctcaataacatgcgtgaattaaagtgactcaattcaaaagcacttaaaatagtg |
6224834 |
T |
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| Q |
110 |
-ttgtaaaatgtgcttttggaagaagctagcatgcgtgtgtgctctttatcttttgaatccaattttcgctcagcattttctgcttcattcttcat |
204 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6224833 |
tttgtaaaatgtgcttttgcaagaagctagcatgcgtgtgtgctctttatcttttgaatccaattttcgctcagcattttctgcttcattcttcat |
6224738 |
T |
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