View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16766_low_14 (Length: 282)
Name: NF16766_low_14
Description: NF16766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16766_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 24 - 264
Target Start/End: Original strand, 33203121 - 33203361
Alignment:
| Q |
24 |
gttgtgctacgaaccgaggtccgttctcgagctttgtcgtagccctagcccagaaaagaaaccatctcaacaagaacaagaacataatccagaagtggaa |
123 |
Q |
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| T |
33203121 |
gttgtgctacgaaccgaggtccgttctcgagctttgtcgtagccctagcccagaaaagaaaccatctcaacaagaacaagaacataatccagaagtggaa |
33203220 |
T |
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| Q |
124 |
caagaggatcatgcttccttgccaaatttggattggtgggattccatcatgaaagatttaggtttacaagacgactcttcaactcccataatacccctct |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33203221 |
caagaggatcatgcttccttgccaaatttggattggtgggattccatcatgaaagatttaggtttacaagacgactcttcaactcccataatacccctct |
33203320 |
T |
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| Q |
224 |
tgaaaaacaccaataatacctcagaaatttaccctaaccct |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
33203321 |
tgaaaaacaccaataatacctcagaaatttaccctaaccct |
33203361 |
T |
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