View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16766_low_3 (Length: 601)

Name: NF16766_low_3
Description: NF16766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16766_low_3
NF16766_low_3
[»] chr8 (32 HSPs)
chr8 (227-580)||(41831824-41832194)
chr8 (11-229)||(41839785-41840003)
chr8 (227-389)||(41838219-41838381)
chr8 (83-229)||(41833598-41833744)
chr8 (469-580)||(41837615-41837726)
chr8 (384-529)||(22651958-22652107)
chr8 (385-467)||(41838119-41838199)
chr8 (384-488)||(29510273-29510381)
chr8 (384-529)||(36450693-36450831)
chr8 (389-455)||(22595981-22596045)
chr8 (385-457)||(25192353-25192423)
chr8 (385-516)||(5813575-5813699)
chr8 (385-529)||(15816057-15816205)
chr8 (390-496)||(31556985-31557083)
chr8 (384-458)||(24857991-24858065)
chr8 (388-457)||(18407705-18407772)
chr8 (384-457)||(20873051-20873122)
chr8 (387-439)||(13436988-13437038)
chr8 (386-454)||(30271300-30271366)
chr8 (385-456)||(22204622-22204693)
chr8 (390-457)||(24613509-24613573)
chr8 (402-457)||(25566841-25566894)
chr8 (452-516)||(29447498-29447562)
chr8 (388-467)||(44067502-44067579)
chr8 (388-488)||(8343302-8343406)
chr8 (384-457)||(2572062-2572133)
chr8 (388-453)||(4673435-4673498)
chr8 (458-516)||(14134748-14134806)
chr8 (394-496)||(29447071-29447177)
chr8 (387-456)||(30077394-30077461)
chr8 (388-456)||(22197749-22197815)
chr8 (402-455)||(31514872-31514924)
[»] chr4 (31 HSPs)
chr4 (11-229)||(11651747-11651965)
chr4 (227-389)||(11651230-11651394)
chr4 (469-580)||(11650626-11650737)
chr4 (384-516)||(23292938-23293063)
chr4 (385-467)||(11651130-11651210)
chr4 (384-457)||(30298928-30299000)
chr4 (384-457)||(30327796-30327868)
chr4 (388-496)||(3947733-3947839)
chr4 (388-488)||(40481623-40481720)
chr4 (386-457)||(49431009-49431079)
chr4 (389-457)||(42640513-42640582)
chr4 (395-455)||(715615-715674)
chr4 (395-455)||(752941-753000)
chr4 (388-457)||(21945489-21945556)
chr4 (385-496)||(22234851-22234967)
chr4 (394-516)||(24613642-24613768)
chr4 (392-456)||(28084511-28084574)
chr4 (384-457)||(12797344-12797414)
chr4 (385-478)||(4383351-4383447)
chr4 (387-455)||(27706185-27706251)
chr4 (388-455)||(11596360-11596425)
chr4 (384-478)||(12895101-12895192)
chr4 (388-455)||(19482654-19482719)
chr4 (452-488)||(30982847-30982883)
chr4 (384-453)||(28720858-28720924)
chr4 (386-479)||(36635308-36635400)
chr4 (384-473)||(24343489-24343576)
chr4 (384-457)||(35157991-35158062)
chr4 (388-457)||(12708132-12708200)
chr4 (388-421)||(24543967-24544000)
chr4 (384-515)||(12895227-12895351)
[»] chr2 (38 HSPs)
chr2 (11-195)||(2841450-2841635)
chr2 (384-441)||(24894371-24894426)
chr2 (384-457)||(37558959-37559030)
chr2 (384-457)||(19536403-19536475)
chr2 (384-498)||(30404820-30404927)
chr2 (384-457)||(18421945-18422016)
chr2 (387-445)||(27460011-27460068)
chr2 (384-441)||(10547950-10548007)
chr2 (384-457)||(14996229-14996301)
chr2 (384-456)||(21374706-21374776)
chr2 (388-457)||(21624252-21624320)
chr2 (384-516)||(2438671-2438794)
chr2 (384-457)||(6940237-6940308)
chr2 (384-457)||(20539680-20539751)
chr2 (384-457)||(30717536-30717607)
chr2 (384-487)||(15972855-15972951)
chr2 (388-455)||(38117167-38117232)
chr2 (399-457)||(5040729-5040787)
chr2 (384-457)||(15657846-15657917)
chr2 (384-441)||(16069276-16069331)
chr2 (387-488)||(18840993-18841087)
chr2 (388-457)||(20473308-20473375)
chr2 (386-516)||(37419727-37419861)
chr2 (384-457)||(23058448-23058520)
chr2 (388-488)||(28677895-28677993)
chr2 (394-480)||(5891762-5891845)
chr2 (385-456)||(21091706-21091775)
chr2 (393-456)||(33153415-33153476)
chr2 (387-457)||(11223869-11223937)
chr2 (384-457)||(12940941-12941012)
chr2 (384-441)||(21616744-21616799)
chr2 (388-441)||(31808063-31808114)
chr2 (385-473)||(19573962-19574047)
chr2 (389-441)||(21782840-21782890)
chr2 (384-456)||(39323246-39323316)
chr2 (426-478)||(44635520-44635573)
chr2 (393-457)||(12224212-12224276)
chr2 (452-488)||(35056922-35056958)
[»] chr5 (38 HSPs)
chr5 (384-517)||(15382459-15382593)
chr5 (388-516)||(31084309-31084435)
chr5 (385-488)||(39698524-39698631)
chr5 (384-485)||(21522732-21522837)
chr5 (384-485)||(21533298-21533403)
chr5 (384-457)||(14674251-14674322)
chr5 (384-457)||(21191062-21191133)
chr5 (384-457)||(13287405-13287476)
chr5 (387-496)||(42893345-42893447)
chr5 (389-457)||(6247609-6247675)
chr5 (397-457)||(15883982-15884041)
chr5 (384-455)||(4105239-4105310)
chr5 (391-457)||(33178014-33178078)
chr5 (384-457)||(21576751-21576822)
chr5 (394-457)||(7218273-7218334)
chr5 (388-488)||(21542016-21542120)
chr5 (375-457)||(21351911-21351991)
chr5 (384-437)||(19552569-19552620)
chr5 (384-457)||(19579683-19579754)
chr5 (384-418)||(22013396-22013430)
chr5 (384-452)||(22299492-22299557)
chr5 (384-457)||(24906307-24906378)
chr5 (424-480)||(5467961-5468017)
chr5 (386-457)||(8420011-8420080)
chr5 (384-420)||(15410489-15410525)
chr5 (384-455)||(43001782-43001851)
chr5 (402-441)||(2952268-2952306)
chr5 (385-480)||(12641657-12641756)
chr5 (394-457)||(30135305-30135367)
chr5 (384-441)||(6770525-6770580)
chr5 (384-418)||(36642805-36642839)
chr5 (384-457)||(37328850-37328921)
chr5 (384-456)||(6326304-6326374)
chr5 (380-441)||(7677681-7677742)
chr5 (387-441)||(14422889-14422939)
chr5 (386-457)||(10298553-10298622)
chr5 (386-457)||(17177029-17177098)
chr5 (388-439)||(41995457-41995506)
[»] scaffold0103 (1 HSPs)
scaffold0103 (384-485)||(51793-51890)
[»] chr7 (33 HSPs)
chr7 (387-514)||(24339627-24339758)
chr7 (384-530)||(43027402-43027546)
chr7 (384-488)||(13770673-13770775)
chr7 (384-529)||(21864788-21864928)
chr7 (387-516)||(5409783-5409910)
chr7 (384-457)||(11061082-11061153)
chr7 (387-516)||(15680794-15680916)
chr7 (387-455)||(25481887-25481953)
chr7 (388-454)||(13557750-13557817)
chr7 (388-457)||(21560484-21560556)
chr7 (384-457)||(24105660-24105731)
chr7 (402-488)||(9778500-9778584)
chr7 (389-488)||(32093995-32094093)
chr7 (384-467)||(43249975-43250056)
chr7 (389-516)||(7438693-7438824)
chr7 (400-457)||(3991322-3991377)
chr7 (388-457)||(7197303-7197370)
chr7 (384-457)||(18215192-18215263)
chr7 (384-457)||(27945023-27945094)
chr7 (392-457)||(2334238-2334303)
chr7 (381-418)||(12010023-12010060)
chr7 (451-515)||(9933326-9933389)
chr7 (387-457)||(21930614-21930681)
chr7 (394-457)||(25822647-25822708)
chr7 (406-486)||(26033432-26033516)
chr7 (393-488)||(11665409-11665508)
chr7 (387-441)||(32308105-32308157)
chr7 (388-457)||(9408340-9408407)
chr7 (384-441)||(26733286-26733341)
chr7 (457-530)||(598256-598329)
chr7 (424-473)||(5938492-5938541)
chr7 (384-440)||(11722121-11722175)
chr7 (388-457)||(18038981-18039052)
[»] chr6 (38 HSPs)
chr6 (388-516)||(24645466-24645588)
chr6 (384-480)||(12696306-12696400)
chr6 (387-488)||(16766682-16766787)
chr6 (384-515)||(28152081-28152204)
chr6 (387-478)||(10770659-10770748)
chr6 (385-457)||(27904042-27904114)
chr6 (384-454)||(17841598-17841666)
chr6 (384-457)||(9107376-9107447)
chr6 (384-457)||(34595116-34595187)
chr6 (394-528)||(8713971-8714110)
chr6 (388-496)||(16833294-16833395)
chr6 (388-467)||(3209367-3209446)
chr6 (384-516)||(4877924-4878049)
chr6 (384-488)||(8365488-8365596)
chr6 (384-455)||(8776981-8777050)
chr6 (391-457)||(7977836-7977900)
chr6 (384-457)||(426520-426591)
chr6 (384-441)||(9658861-9658916)
chr6 (384-457)||(31959141-31959212)
chr6 (394-516)||(32978851-32978967)
chr6 (451-515)||(5000568-5000632)
chr6 (388-488)||(5970077-5970181)
chr6 (384-456)||(17302538-17302609)
chr6 (384-441)||(3398601-3398655)
chr6 (387-457)||(7938101-7938169)
chr6 (388-451)||(31429015-31429076)
chr6 (403-457)||(9911534-9911587)
chr6 (389-457)||(1681745-1681811)
chr6 (389-457)||(7801162-7801228)
chr6 (384-455)||(17435181-17435250)
chr6 (392-457)||(853865-853928)
chr6 (384-418)||(9027160-9027194)
chr6 (409-457)||(9522898-9522944)
chr6 (384-456)||(17341671-17341741)
chr6 (384-421)||(23771561-23771598)
chr6 (398-457)||(1191706-1191763)
chr6 (386-441)||(7265615-7265668)
chr6 (390-445)||(24115865-24115918)
[»] scaffold0019 (1 HSPs)
scaffold0019 (388-516)||(71709-71843)
[»] chr3 (45 HSPs)
chr3 (389-516)||(4987232-4987363)
chr3 (385-529)||(27505229-27505371)
chr3 (388-478)||(21479104-21479193)
chr3 (388-457)||(16000022-16000089)
chr3 (384-457)||(28917983-28918054)
chr3 (387-463)||(35994738-35994811)
chr3 (384-529)||(55401057-55401195)
chr3 (384-488)||(10954934-10955031)
chr3 (388-452)||(14747547-14747610)
chr3 (391-457)||(26508099-26508163)
chr3 (384-457)||(8587027-8587098)
chr3 (387-456)||(10268493-10268560)
chr3 (394-480)||(14209105-14209195)
chr3 (395-480)||(34307763-34307846)
chr3 (389-457)||(21256992-21257058)
chr3 (380-488)||(14832077-14832189)
chr3 (388-439)||(40052318-40052367)
chr3 (388-457)||(14829676-14829742)
chr3 (385-516)||(28812499-28812633)
chr3 (384-418)||(3865599-3865633)
chr3 (384-418)||(10318077-10318111)
chr3 (384-457)||(10335292-10335363)
chr3 (391-456)||(11610510-11610573)
chr3 (384-457)||(15796300-15796371)
chr3 (388-457)||(20503451-20503518)
chr3 (387-457)||(25775493-25775562)
chr3 (384-453)||(26492215-26492282)
chr3 (388-457)||(34185129-34185196)
chr3 (388-457)||(39756222-39756289)
chr3 (384-456)||(14216874-14216944)
chr3 (384-456)||(14223003-14223073)
chr3 (384-455)||(3164033-3164102)
chr3 (384-463)||(24205041-24205118)
chr3 (384-455)||(25948895-25948964)
chr3 (394-457)||(34910309-34910370)
chr3 (388-516)||(40993287-40993409)
chr3 (402-457)||(51206359-51206412)
chr3 (388-458)||(3610619-3610687)
chr3 (424-483)||(5339128-5339187)
chr3 (402-457)||(8593136-8593190)
chr3 (387-441)||(14979166-14979218)
chr3 (384-457)||(8383239-8383310)
chr3 (402-457)||(1509539-1509592)
chr3 (386-418)||(32400748-32400780)
chr3 (394-457)||(49651792-49651853)
[»] chr1 (46 HSPs)
chr1 (384-516)||(1486656-1486786)
chr1 (384-457)||(18471280-18471353)
chr1 (374-488)||(22515867-22515974)
chr1 (388-457)||(5944267-5944336)
chr1 (388-457)||(31694716-31694785)
chr1 (384-488)||(46348363-46348460)
chr1 (384-488)||(18556425-18556533)
chr1 (394-488)||(51410016-51410104)
chr1 (388-456)||(6427447-6427516)
chr1 (392-455)||(113289-113350)
chr1 (388-516)||(47989484-47989615)
chr1 (384-455)||(13011223-13011293)
chr1 (386-516)||(37598816-37598938)
chr1 (384-441)||(398787-398842)
chr1 (388-457)||(22881622-22881689)
chr1 (384-457)||(38078667-38078738)
chr1 (384-457)||(42359455-42359526)
chr1 (384-457)||(48450593-48450664)
chr1 (385-457)||(1815240-1815310)
chr1 (393-457)||(19058862-19058924)
chr1 (423-516)||(40258885-40258973)
chr1 (386-457)||(9103624-9103692)
chr1 (452-516)||(9828098-9828162)
chr1 (387-453)||(31672905-31672969)
chr1 (402-488)||(52284702-52284792)
chr1 (384-441)||(2896143-2896198)
chr1 (384-457)||(5376506-5376577)
chr1 (384-457)||(6612177-6612248)
chr1 (380-441)||(12443482-12443541)
chr1 (388-456)||(14359529-14359594)
chr1 (388-457)||(24577192-24577259)
chr1 (384-457)||(31015025-31015096)
chr1 (385-457)||(1704998-1705068)
chr1 (388-516)||(5898218-5898339)
chr1 (384-448)||(15641045-15641107)
chr1 (384-457)||(26526762-26526835)
chr1 (384-488)||(40917733-40917839)
chr1 (384-457)||(48040467-48040539)
chr1 (386-457)||(24334711-24334781)
chr1 (384-445)||(1262866-1262925)
chr1 (388-441)||(13997869-13997920)
chr1 (384-457)||(21378560-21378631)
chr1 (388-441)||(36878447-36878498)
chr1 (383-439)||(6427331-6427385)
chr1 (384-441)||(9033029-9033085)
chr1 (388-456)||(29144365-29144431)
[»] scaffold0246 (1 HSPs)
scaffold0246 (388-488)||(19562-19659)
[»] scaffold0306 (1 HSPs)
scaffold0306 (384-479)||(13382-13476)
[»] scaffold0223 (1 HSPs)
scaffold0223 (384-456)||(20154-20224)
[»] scaffold0152 (1 HSPs)
scaffold0152 (384-479)||(21851-21945)
[»] scaffold0004 (2 HSPs)
scaffold0004 (389-457)||(123612-123681)
scaffold0004 (385-456)||(92790-92859)
[»] scaffold0053 (1 HSPs)
scaffold0053 (384-488)||(8780-8877)
[»] scaffold0793 (1 HSPs)
scaffold0793 (395-455)||(4891-4950)
[»] scaffold0066 (1 HSPs)
scaffold0066 (394-472)||(33355-33430)
[»] scaffold0652 (1 HSPs)
scaffold0652 (384-457)||(468-539)
[»] scaffold0027 (1 HSPs)
scaffold0027 (384-457)||(46664-46735)
[»] scaffold0018 (2 HSPs)
scaffold0018 (384-456)||(178825-178896)
scaffold0018 (385-456)||(192256-192325)
[»] scaffold0171 (2 HSPs)
scaffold0171 (388-478)||(23406-23494)
scaffold0171 (389-456)||(23497-23563)
[»] scaffold0136 (1 HSPs)
scaffold0136 (388-528)||(3778-3922)
[»] scaffold0003 (2 HSPs)
scaffold0003 (384-488)||(241576-241684)
scaffold0003 (385-437)||(348083-348135)
[»] scaffold0722 (1 HSPs)
scaffold0722 (385-455)||(7040-7108)
[»] scaffold0025 (1 HSPs)
scaffold0025 (386-457)||(23753-23823)
[»] scaffold0021 (1 HSPs)
scaffold0021 (384-457)||(130464-130535)
[»] scaffold0361 (1 HSPs)
scaffold0361 (394-454)||(14522-14580)
[»] scaffold0083 (1 HSPs)
scaffold0083 (384-457)||(45536-45608)
[»] scaffold0050 (1 HSPs)
scaffold0050 (388-515)||(70264-70384)
[»] scaffold0036 (1 HSPs)
scaffold0036 (452-516)||(9688-9752)
[»] scaffold0007 (1 HSPs)
scaffold0007 (384-467)||(225264-225345)
[»] scaffold0450 (1 HSPs)
scaffold0450 (389-488)||(8604-8707)
[»] scaffold0008 (1 HSPs)
scaffold0008 (451-480)||(263349-263378)
[»] scaffold0011 (1 HSPs)
scaffold0011 (386-457)||(17755-17824)


Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-128; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 227 - 580
Target Start/End: Complemental strand, 41832194 - 41831824
Alignment:
Q  227 ctagcatggacaagctaacaagtggtacattgaagcaaaagcccaagaccacaatgggagaggaaagcgcccttctgggcacgtgattatgtgggaatca 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41832194 ctagcatggacaagctaacaagtggtacattgaagcaaaagcccaagaccacaatgggagaggaaagcgcccttctgggcacgtgattatgtgggaatca 41832095  T
Q  327 caccaactttagagtaatgaaatatctgttgtaat--ccttggcctctagcctaagaagcacgg------------------acactgacacgccgacac 406  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||                  |||| |||| ||||||||    
T  41832094 caccaactttagagtaatgaaatatctgttgtaatccccttggcctctagcctaagaagcacggatacggacacaagatacaacacagacatgccgacac 41831995  T
Q  407 agctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattc 506  Q
    || ||||||||| |  ||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||||||||| || ||||||    
T  41831994 agttaataatttga--aaaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccgacaacaggacacgtctaattc 41831897  T
Q  507 gaggagtgtcatttcttcatagccactagctagtttgttgccatcttttatggatctgggcacatgtgtcatta 580  Q
    ||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41831896 gaggagtgtccattcttcatag-cactagttagtttgttgccatcttttatggatctgggcacatgtgtcatta 41831824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 41840003 - 41839785
Alignment:
Q  11 cataggcaggacaaaatccagaggaatgaaaccaacagcaccaaccacgccattgatgtctccaaaaaacggcaacatggctgccagaaatccacagaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41840003 cataggcaggacaaaatccagaggaatgaaaccaacagcaccaaccacgccattgatgtctccaaaaaacggcaacatggctgccagaaatccacagaaa 41839904  T
Q  111 atcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatctgctgatttcttctccattatctcataag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41839903 atcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatctgctgatttcttctccattatctcataag 41839804  T
Q  211 caacttgagaataaaccta 229  Q
    |||||||||||||||||||    
T  41839803 caacttgagaataaaccta 41839785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 227 - 389
Target Start/End: Complemental strand, 41838381 - 41838219
Alignment:
Q  227 ctagcatggacaagctaacaagtggtacattgaagcaaaagcccaagaccacaatgggagaggaaagcgcccttctgggcacgtgattatgtgggaatca 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41838381 ctagcatggacaagctaacaagtggtacattgaagcaaaagcccaagaccacaatgggagaggaaagcgcccttctgggcacgtgattatgtgggaatca 41838282  T
Q  327 caccaactttagagtaatgaaatatctgttgtaatccttggcctctagcctaagaagcacgga 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41838281 caccaactttagagtaatgaaatatctgttgtaatccttggcctctagcctaagaagcacgga 41838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 41833744 - 41833598
Alignment:
Q  83 caacatggctgccagaaatccacagaaaatcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatct 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41833744 caacatggctgccagaaatccacagaaaatcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatct 41833645  T
Q  183 gctgatttcttctccattatctcataagcaacttgagaataaaccta 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41833644 gctgatttcttctccattatctcataagcaacttgagaataaaccta 41833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 469 - 580
Target Start/End: Complemental strand, 41837726 - 41837615
Alignment:
Q  469 gacacgacacgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagccactagctagtttgttgccatcttttatggatctgggca 568  Q
    ||||||||| |||||||||||||| ||| || |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41837726 gacacgacatgtatccgacaacagaacacgtctaatccgaagagtgtccgttcttcatagccactagctagtttgttgccatcttttatggatctgggca 41837627  T
Q  569 catgtgtcatta 580  Q
    ||||||||||||    
T  41837626 catgtgtcatta 41837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 384 - 529
Target Start/End: Original strand, 22651958 - 22652107
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| ||||| |||||      |||||||||||||||| |||||||||    
T  22651958 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 22652055  T
Q  478 cgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 529  Q
     || ||||||| | ||||| || |||| |||||||||||  | |||||||||    
T  22652056 tgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagc 22652107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 385 - 467
Target Start/End: Complemental strand, 41838199 - 41838119
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 467  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||    
T  41838199 acggacactgacacgtcgacacagctaataatttaaa--aaaatcacataattcagtgcaactacaagtgttgtgtcggtgtc 41838119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 488
Target Start/End: Complemental strand, 29510381 - 29510273
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc------gtgtcggtgtcagacacgaca 477  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||| |||||||||||| ||||||||||      ||||||||||| ||||||||     
T  29510381 cacggacactgacacgccgacacagctaataatttga--aaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacg 29510284  T
Q  478 cgtatccgaca 488  Q
    ||| |||||||    
T  29510283 cgtgtccgaca 29510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 529
Target Start/End: Complemental strand, 36450831 - 36450693
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||||||||||||||||||||| |||||||||| ||  ||||||||| |||||||| ||| ||||||||| |     ||||| |||||||| ||| ||    
T  36450831 cacggacactgacacgccgacacaactaataatttgaa--aaaatcacagaattcagtgtaattacaagtgtag-----gtgtcggacacgacgcgtgtc 36450739  T
Q  484 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 529  Q
    ||||| ||||||| |  |||| |||||||||||  | |||||||||    
T  36450738 cgacaccaggacacgcctaatccgaggagtgtctgtgcttcatagc 36450693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 389 - 455
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||| ||| |||||||||    
T  22595981 acactgacacgccgacacagctaataatttaa--aaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 385 - 457
Target Start/End: Complemental strand, 25192423 - 25192353
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||||||||||||| |  |||| | |||||||||||||||| || ||||||||    
T  25192423 acggacactgacacgccgacacagctaataatttga--aaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 516
Target Start/End: Original strand, 5813575 - 5813699
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatcc 484  Q
    |||||||| ||||||||||||||||||||||||| |  |||| ||||||| || ||| ||| |||||     ||||||||||| |||||||||||| |||    
T  5813575 acggacacggacacgccgacacagctaataatttga--aaaagtcacatattttagtgtaaatacaa-----gtgtcggtgtcggacacgacacgtgtcc 5813667  T
Q  485 gacaacaggacatgtataattcgaggagtgtc 516  Q
    |||| | ||||| |  ||||| ||||||||||    
T  5813668 gacaccgggacacgcctaattggaggagtgtc 5813699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 529
Target Start/End: Complemental strand, 15816205 - 15816057
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacac 478  Q
    ||||||||||||||||||||||| |||||||||| |  ||||||||||||||| ||| ||| || ||      ||||||||| |||||| ||||||||||    
T  15816205 acggacactgacacgccgacacaactaataatttga--aaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacac 15816108  T
Q  479 gtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 529  Q
    | |||||||| | ||||| |  |||| |||| ||||||  | |||||||||    
T  15816107 gaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 15816057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 496
Target Start/End: Original strand, 31556985 - 31557083
Alignment:
Q  390 cactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaa 489  Q
    ||||||||||||||||||| |||||||||    ||||||||||||||||||| ||| |||||     || ||||||||||||||||||| | |||||||     
T  31556985 cactgacacgccgacacagttaataattt---gaaaaatcacataattcagtgtaattacaa-----gtttcggtgtcagacacgacacatgtccgacac 31557076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 24857991 - 24858065
Alignment:
Q  384 cacggacactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtgtcgt 458  Q
    ||||||||  ||||||||||||||| ||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  24857991 cacggacatggacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgtaa-tacaagtgtcgt 24858065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 18407705 - 18407772
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||| |||| ||||||||||||||||||| |||  |||||||||||||||||| ||| |||||||||||    
T  18407705 gacacagacatgccgacacagctaataattcaaa--aaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 20873051 - 20873122
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||| || ||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  20873051 cacggacactgacacgccgacatagataataatttga--aaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 13437038 - 13436988
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattca 439  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  13437038 ggacactgacacgccgacacagctaataatttga--aaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 454
Target Start/End: Complemental strand, 30271366 - 30271300
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg 454  Q
    |||||||||||||||||||||||||||| |||| |  |||||||||||||| |||| ||| ||||||||    
T  30271366 cggacactgacacgccgacacagctaatcatttga--aaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 22204622 - 22204693
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||||||||||||||||||||| ||||||||||||| || |   | |||||||||| ||| ||||||||||    
T  22204622 acggacactgacacgccgacacaactaataatttaaaaaatatatatataattcagtgtaattacaagtgtc 22204693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 390 - 457
Target Start/End: Original strand, 24613509 - 24613573
Alignment:
Q  390 cactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||| |||||||||||||||||||    ||||||||||||||| ||| ||| |||||||||||    
T  24613509 cactgacacaccgacacagctaataattt---gaaaaatcacataattaagtgtaattacaagtgtcg 24613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 25566841 - 25566894
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  25566841 gacacagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 25566894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 516
Target Start/End: Original strand, 29447498 - 29447562
Alignment:
Q  452 gtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 516  Q
    |||||||||||||||||||||||||| || ||||||| | ||||| || ||||  ||||||||||    
T  29447498 gtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtc 29447562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 44067502 - 44067579
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 467  Q
    ||||||||||||||||||| | ||||||||| |   ||||| ||||||| |||| ||| || ||||||||||||||||||    
T  44067502 gacactgacacgccgacacggataataatttgag--aaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc 44067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 488
Target Start/End: Original strand, 8343302 - 8343406
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcg-----gtgtcagacacgacacgta 481  Q
    ||||| ||||| |||||| |||||||||||| ||  |||||||||||||| ||| ||| |||||||||| ||||||     ||||| ||||||||||||     
T  8343302 gacaccgacacaccgacatagctaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtg 8343399  T
Q  482 tccgaca 488  Q
    |||||||    
T  8343400 tccgaca 8343406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 2572133 - 2572062
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| || |||||| ||||||| |||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  2572133 cacggataccgacacgtcgacacacctaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 453
Target Start/End: Complemental strand, 4673498 - 4673435
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 453  Q
    ||||||||||||||||||||| ||||||||| |  |||||||| | |||||||| ||| |||||||    
T  4673498 gacactgacacgccgacacagataataatttga--aaaaatcataaaattcagtgtaattacaagt 4673435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 516
Target Start/End: Original strand, 14134748 - 14134806
Alignment:
Q  458 tgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 516  Q
    ||||||||||| ||||||||||| |||| || ||||||| |  ||||||||||||||||    
T  14134748 tgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtc 14134806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 29447177 - 29447071
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||| ||||||| |||||||||| |   |||||||||||||||| | |||||||||||||||      |||||||||| ||||||||| || || |||    
T  29447177 gacacgtcgacacaactaataatttgag--aaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgac 29447080  T
Q  488 aacaggaca 496  Q
    | |||||||    
T  29447079 accaggaca 29447071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 456
Target Start/End: Complemental strand, 30077461 - 30077394
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||| |||||||| || ||||||||||||| ||  || ||||||||||||||| ||| ||||||||||    
T  30077461 ggacacggacacgccaacgcagctaataatttgaa--aacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 456
Target Start/End: Complemental strand, 22197815 - 22197749
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||| ||||||| |||||||||||||||| |  |||| |||||||||| ||| ||| ||||||||||    
T  22197815 gacactaacacgccaacacagctaataatttga--aaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 31514872 - 31514924
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||| |||||||||| || ||||||||||||||||||  |||||||||||||    
T  31514872 gacacaactaataatttgaa-aaaaatcacataattcagcgtaactacaagtgt 31514924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 229
Target Start/End: Complemental strand, 11651965 - 11651747
Alignment:
Q  11 cataggcaggacaaaatccagaggaatgaaaccaacagcaccaaccacgccattgatgtctccaaaaaacggcaacatggctgccagaaatccacagaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651965 cataggcaggacaaaatccagaggaatgaaaccaacagcaccaaccacgccattgatgtctccaaaaaacggcaacatggctgccagaaatccacagaaa 11651866  T
Q  111 atcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatctgctgatttcttctccattatctcataag 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651865 atcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatctgctgatttcttctccattatctcataag 11651766  T
Q  211 caacttgagaataaaccta 229  Q
    |||||||||||||||||||    
T  11651765 caacttgagaataaaccta 11651747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 227 - 389
Target Start/End: Complemental strand, 11651394 - 11651230
Alignment:
Q  227 ctagcatggacaagctaacaagtggtacattgaagcaaaagcccaagaccacaatgggagaggaaagcgcccttctgggcacgtgattatgtgggaatca 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651394 ctagcatggacaagctaacaagtggtacattgaagcaaaagcccaagaccacaatgggagaggaaagcgcccttctgggcacgtgattatgtgggaatca 11651295  T
Q  327 caccaactttagagtaatgaaatatctgttgtaat--ccttggcctctagcctaagaagcacgga 389  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11651294 caccaactttagagtaatgaaatatctgttgtaatccccttggcctctagcctaagaagcacgga 11651230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 469 - 580
Target Start/End: Complemental strand, 11650737 - 11650626
Alignment:
Q  469 gacacgacacgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagccactagctagtttgttgccatcttttatggatctgggca 568  Q
    ||||||||| |||||||||||||| ||| || |||| ||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11650737 gacacgacatgtatccgacaacagaacacgtctaatccgaagagtgtccgttcttcatagccactagctagtttgttgccatcttttatggatctgggca 11650638  T
Q  569 catgtgtcatta 580  Q
    ||||||||||||    
T  11650637 catgtgtcatta 11650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 384 - 516
Target Start/End: Complemental strand, 23293063 - 23292938
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||| |||||||     ||||||||| |||||||||||| ||    
T  23293063 cacggacaatgacacgccgacacagctaataatttgaa--aaaatcacataattcagtataattacaagt-----gtcggtgtcggacacgacacgtgtc 23292971  T
Q  484 cgacaacaggacatgtataattcgaggagtgtc 516  Q
    ||||| | ||||| |  |||| |||||||||||    
T  23292970 cgacaccgggacacgcctaatccgaggagtgtc 23292938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 385 - 467
Target Start/End: Complemental strand, 11651210 - 11651130
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 467  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||    
T  11651210 acggacactgacacgtcgacacagctaataatttaaa--aaaatcacataattcagtgcaactacaagtgttgtgtcggtgtc 11651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 30298928 - 30299000
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||    
T  30298928 cacggacactgacacgccgacacagctaataatttgaa-aaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 30327796 - 30327868
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||    
T  30327796 cacggacactgacacgccgacacagctaataatttgaa-aaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 496
Target Start/End: Complemental strand, 3947839 - 3947733
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccga 486  Q
    ||||| |||| |||||||||||||||||||| |  ||||||| ||||||||||| ||| |||||||||| ||||| ||||| |||||||||||| |||||    
T  3947839 gacacggacatgccgacacagctaataatttga--aaaaatcgcataattcagtgtaattacaagtgtcagtgtc-gtgtcggacacgacacgtgtccga 3947743  T
Q  487 caacaggaca 496  Q
    || |||||||    
T  3947742 caccaggaca 3947733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 488
Target Start/End: Original strand, 40481623 - 40481720
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||||||||||||| ||| |||||||||| ||   ||||||||||||||||| ||| |||||||||  |||||||||  |||||||||||| ||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaa---aaatcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgac 40481719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 49431009 - 49431079
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||| ||| || ||||||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaa-aaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 457
Target Start/End: Original strand, 42640513 - 42640582
Alignment:
Q  389 acactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||| |||||||||||    
T  42640513 acacggacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcg 42640582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 455
Target Start/End: Complemental strand, 715674 - 715615
Alignment:
Q  395 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  715674 acacaccgacacagctaataatttaaa-aaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 455
Target Start/End: Complemental strand, 753000 - 752941
Alignment:
Q  395 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  753000 acacaccgacacagctaataatttaaa-aaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 21945489 - 21945556
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| |||||||||||||||||||| |  |||||| |||||||||||| ||| |||||||||||    
T  21945489 gacactgacatgccgacacagctaataatttga--aaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 496
Target Start/End: Complemental strand, 22234967 - 22234851
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacac 478  Q
    |||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||||| ||| |  | ||||||      |||||||||| ||||||||||    
T  22234967 acggacacggacacgccgacaccgctaaaaatttgaa-aaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacac 22234869  T
Q  479 gtatccgacaacaggaca 496  Q
    || ||||||| |||||||    
T  22234868 gtgtccgacaccaggaca 22234851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 516
Target Start/End: Complemental strand, 24613768 - 24613642
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||| ||||||| |||||||||| |   |||||||||||||||| | ||| |||||||||||      ||||||||||||||||||||||| || |||    
T  24613768 gacacgtcgacacaactaataatttgag--aaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgac 24613671  T
Q  488 aacaggacatgtataattcgaggagtgtc 516  Q
    | ||||||| || |||| | |||||||||    
T  24613670 accaggacacgtctaatcctaggagtgtc 24613642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 456
Target Start/End: Original strand, 28084511 - 28084574
Alignment:
Q  392 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||| | ||| ||||||||||    
T  28084511 ctgacacgccgacacagctaagaatttgaa-aaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 12797414 - 12797344
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||| || | |||||||||| ||   ||||||||||||||||| ||| |||||||||||    
T  12797414 cacggacactgacacgccggcaaaactaataatttgaa---aaatcacataattcagtgtaattacaagtgtcg 12797344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 478
Target Start/End: Original strand, 4383351 - 4383447
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacac 478  Q
    ||||||||||||||| ||| ||| ||||||||||    ||||||||||||||||||| ||| ||||      |||||||||||||||||| |||||||||    
T  4383351 acggacactgacacgtcgatacaactaataattt---gaaaaatcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 27706251 - 27706185
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    ||||||||||||| |||||||  |||||||||||  ||||||||||||||| ||| ||| |||||||||    
T  27706251 ggacactgacacgtcgacacaattaataatttaa--aaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 455
Target Start/End: Complemental strand, 11596425 - 11596360
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||| ||||| ||| |||||||||||| ||  |||||||||||||||||| ||| |||||||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 478
Target Start/End: Complemental strand, 12895192 - 12895101
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 478  Q
    ||||||||| |||||||||| |||||||||||||| |  |||||||||||||||||   ||| |||||||||| ||||| ||||| ||||||||||    
T  12895192 cacggacac-gacacgccgaaacagctaataatttga--aaaaatcacataattcaaagtaattacaagtgtcggtgtc-gtgtcggacacgacac 12895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 455
Target Start/End: Original strand, 19482654 - 19482719
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||||||||||||||| |||||||||| |  ||| |||||||||||| || ||| |||||||||    
T  19482654 gacactgacacgccgacacaactaataatttga--aaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 30982883 - 30982847
Alignment:
Q  452 gtgtcgtgtcggtgtcagacacgacacgtatccgaca 488  Q
    ||||||||||||||||||||||||||||| |||||||    
T  30982883 gtgtcgtgtcggtgtcagacacgacacgtgtccgaca 30982847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 453
Target Start/End: Original strand, 28720858 - 28720924
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 453  Q
    |||| ||||||||| ||||||||||||||||||||    |||||||| ||||| |||| |||||||||||    
T  28720858 cacgaacactgacatgccgacacagctaataattt---gaaaaatcatataatgcagtgtaactacaagt 28720924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 479
Target Start/End: Original strand, 36635308 - 36635400
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg-tcgtgtcggtgtcagacacgacacg 479  Q
    |||||||||||||||| ||||  |||||||||| |   |||||||||||||||||| ||| || | ||| ||||||  |||||||||||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttga--gaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacg 36635400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 473
Target Start/End: Original strand, 24343489 - 24343576
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 473  Q
    ||||||| | ||||||||||||| | ||||||||| |   ||||| |||||||||||| ||| || | |||||||||||||||| |||||    
T  24343489 cacggacgccgacacgccgacacggataataatttgag--aaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacac 24343576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 35158062 - 35157991
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||| || ||||||||||    ||||||||||||||| ||| ||| || ||||||||    
T  35158062 cacggacactgacacgccgacgcaactaataattt--ggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 12708132 - 12708200
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||| |||||| ||||||||||  | |||||| | |||||||||| ||| |||||||||||    
T  12708132 gacactgacacgcagacacaactaataattttta-aaaaatgaaataattcagtgtaattacaagtgtcg 12708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 421
Target Start/End: Original strand, 24543967 - 24544000
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaa 421  Q
    |||||||||||||||||||| |||||||||||||    
T  24543967 gacactgacacgccgacacaactaataatttaaa 24544000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 515
Target Start/End: Complemental strand, 12895351 - 12895227
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||| ||| |||||||||||||||  ||||||||| |  |||||||||||||||  || ||| || ||     ||||||||||| ||||||||| |||||    
T  12895351 cacgaacaatgacacgccgacacaaataataatttga--aaaaatcacataattttgtgtaattataa-----gtgtcggtgtcggacacgacatgtatc 12895259  T
Q  484 cgacaacaggacatgtataattcgaggagtgt 515  Q
    ||||| | ||||| |  |||| ||||||||||    
T  12895258 cgacatcgggacacgcctaatccgaggagtgt 12895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 8e-72; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 2841635 - 2841450
Alignment:
Q  11 cataggcaggacaaaatccagaggaatgaaaccaacagcaccaaccacgccattgatgtctccaaaaaa-cggcaacatggctgccagaaatccacagaa 109  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2841635 cataggcagaacaaaatccagaggaatgaaaccaacagcaccaaccatgccattgatgtctccaaaaaaacggcaacatggctgccagaaatccacagaa 2841536  T
Q  110 aatcatgtaagttgttcgaagaatcaggcgaggaagaagatttcttttggaaaacatcccttgcttcacatctgctgatttcttct 195  Q
    || ||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||||    
T  2841535 aaacatgtaaattgttcgaagagtcaagcgaggaagaagatttcttttggaaaacatctctggcttcacatctgccgatctcttct 2841450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 24894371 - 24894426
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  24894371 cacggacactgacacgccgacacagctaataatttaa--aaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 37558959 - 37559030
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||| | ||| |||||||||||    
T  37558959 cacggacactgacacgccgacacagctaataattt--gtaaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 19536475 - 19536403
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||||    
T  19536475 cacggacaatgacacgccgacacaactaataatttgaa-aaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 384 - 498
Target Start/End: Complemental strand, 30404927 - 30404820
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    ||||||||||||||||||||||| | ||||||||| ||  |||||||||||||||||| ||| |||||||     ||||| ||| |||||||||| | ||    
T  30404927 cacggacactgacacgccgacacggttaataatttgaa--aaaatcacataattcagtgtaattacaagt-----gtcggcgtcggacacgacacatgtc 30404835  T
Q  484 cgacaacaggacatg 498  Q
    ||||| |||||||||    
T  30404834 cgacaccaggacatg 30404820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 18421945 - 18422016
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||  |||||||||||  ||| ||||||||||||||| ||| |||||||||||    
T  18421945 cacggacactgacacgccgacacaattaataatttaa--aaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 27460011 - 27460068
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataa 445  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaa-aaaaatgacataattcagtataa 27460068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 10548007 - 10547950
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||    
T  10548007 cacggacactgacacgtcgacaccgttaataatttaaataaaaatcatataattcagt 10547950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 14996301 - 14996229
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||| |||||||||||||||||||| || |||||||| |||||| ||| ||| |||||||||||    
T  14996301 cacggacactgacaagccgacacagctaataatttgaa-aaaaatcatataatttagtgtaattacaagtgtcg 14996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 21374776 - 21374706
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||| |||||||||||||||||||||||| |  |||||| |||||||||||| ||| ||||||||||    
T  21374776 cacggacactaacacgccgacacagctaataatttga--aaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 21624252 - 21624320
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||||| || ||||||  ||||||||||| ||| |||||||||||    
T  21624252 gacactgacacgccgacacagctaataattttaa-aaaaatagcataattcagtgtaattacaagtgtcg 21624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 516
Target Start/End: Complemental strand, 2438794 - 2438671
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||||||||||  || ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||     ||||||||| |||||||||| | ||    
T  2438794 cacggacactgac--gctgacacagctaataatttcaa--aaaatcacataattcagtgtaattacaagt-----gtcggtgtcggacacgacacatgtc 2438704  T
Q  484 cgacaacaggacatgtataattcgaggagtgtc 516  Q
    ||||| | ||||| |  |||| |||||||||||    
T  2438703 cgacaccgggacacgcctaatccgaggagtgtc 2438671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 6940237 - 6940308
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||||||||| |  |||| | |||||||| ||| ||| |||||||||||    
T  6940237 cacggacactgacacgccgacacagctaataatttta--aaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 20539751 - 20539680
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||| |||||||||||||||||| |  |||||||| |||||| ||| ||| |||||||||||    
T  20539751 cacggacactgacacgtcgacacagctaataatttga--aaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 30717607 - 30717536
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||  |||||| |||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  30717607 cacggacactgacaaaccgacaaagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 487
Target Start/End: Original strand, 15972855 - 15972951
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    ||||||||||||||||||||||||  ||||||||| |  |||||| ||| |||||||| ||| |||||     ||||||||||| |||||||||||| ||    
T  15972855 cacggacactgacacgccgacacaattaataatttga--aaaaattacacaattcagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 15972947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 455
Target Start/End: Complemental strand, 38117232 - 38117167
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| ||| || ||| |||||||||    
T  38117232 gacactgacacgccgacacagctaataatttga--aaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 457
Target Start/End: Original strand, 5040729 - 5040787
Alignment:
Q  399 gccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||| |||||||||||||| || ||||||||||||||||| | ||| |||||||||||    
T  5040729 gccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcg 5040787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 15657846 - 15657917
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| |||||||||| || ||||||||||   |||||||||||||||||||| ||| ||||| |||||    
T  15657846 cacggacactaacacgccgactcaactaataatttg--taaaaatcacataattcagtgtaattacaaatgtcg 15657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 16069331 - 16069276
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||||||||||| | |||||||||||  |||||||| ||||||||||    
T  16069331 cacggacactgacacgccgacaccgttaataatttaa--aaaaatcatataattcagt 16069276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 488
Target Start/End: Complemental strand, 18841087 - 18840993
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccga 486  Q
    |||||||||||||| |||||| |||||||||| ||  ||||| |||||||| ||| ||| |||||||||||     |||||||||||||||| | |||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaa--aaaattacataattaagtgtaattacaagtgtcg-----gtgtcagacacgacacatgtccga 18840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 20473308 - 20473375
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| ||||||||| ||||||||||||  |||| ||| |||||||||| ||| |||||||||||    
T  20473308 gacactgacatgccgacacaactaataatttaa--aaaactcatataattcagtgtaattacaagtgtcg 20473375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 516
Target Start/End: Original strand, 37419727 - 37419861
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacg 479  Q
    ||||||||||||||||||||  || |||||||| |  |||||||||| |||||||| ||| |||||      |||||||||||||||| |||||||  ||    
T  37419727 cggacactgacacgccgacatggcaaataatttga--aaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcg 37419824  T
Q  480 tatccgacaacaggacatgtataattcgaggagtgtc 516  Q
    | ||||||| | ||||| |  |||| |||||||||||    
T  37419825 tgtccgacaccgggacacgcctaatccgaggagtgtc 37419861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 23058520 - 23058448
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||||||| |||||  ||||||||| || |||||||||||||| |||| ||| |||||||||||    
T  23058520 cacggacagtgacacgcccacacaattaataatttgaa-aaaaatcacataatccagtgtaattacaagtgtcg 23058448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 488
Target Start/End: Original strand, 28677895 - 28677993
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||||  |||||||||| ||||||||||| ||  |||||||||||||||||| ||| || | ||   |||||||||||| |||||||| || ||||||    
T  28677895 gacactggaacgccgacaccgctaataatttgaa--aaaatcacataattcagtgtaattatatgttcggtgtcggtgtcaaacacgacaagtgtccgac 28677992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 480
Target Start/End: Complemental strand, 5891845 - 5891762
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgt 480  Q
    ||||| ||||||||| |||||||||   ||||||| ||||||||  || ||| || |||||||||||||||||  ||||||||||||    
T  5891845 gacacaccgacacagttaataattt---taaaaattacataattatgtgtaattataagtgtcgtgtcggtgtttgacacgacacgt 5891762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 21091706 - 21091775
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||||| ||||||| |||||||||||||   ||||| ||||| |||||| ||| ||||||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaa--gaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 33153415 - 33153476
Alignment:
Q  393 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||||||||| ||| ||||| |||||||  |||||||||||||||||| ||| ||||||||||    
T  33153415 tgacacgccgaaacatctaatgatttaaa--aaaatcacataattcagtgtaattacaagtgtc 33153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 457
Target Start/End: Complemental strand, 11223937 - 11223869
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| ||||||| ||||||||||||| ||| ||  ||||| |||||||||||| ||| |||||||||||    
T  11223937 ggacacagacacgctgacacagctaatattttgaa--aaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 12941012 - 12940941
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||  |||||| |||||||||| |  |||||||| |||||||||| ||| ||||| |||||    
T  12941012 cacggacactgacacgttgacacaactaataatttga--aaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 21616744 - 21616799
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||| ||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  21616744 cacggacacggacacgccgacaccgctaataatttga--gaaaatcacataattcagt 21616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 31808063 - 31808114
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||| ||||||| |||||||||||||   ||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaa--caaaatcacataattcagt 31808114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 473
Target Start/End: Original strand, 19573962 - 19574047
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 473  Q
    |||||||| ||||||||||||| | |||||||||||   ||||| |||||||||||| ||| || | ||| |||||||||||| |||||    
T  19573962 acggacac-gacacgccgacaccgataataatttaag--aaaataacataattcagtgtaattataggtggcgtgtcggtgtcggacac 19574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 21782890 - 21782840
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttga--gaaaatcacataattcagt 21782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 39323246 - 39323316
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||| ||| |||||| ||||||||||| |   ||||| |||||||||||| ||| ||||||||||    
T  39323246 cacggacactgaaacgtcgacaccgctaataatttga--caaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 478
Target Start/End: Original strand, 44635520 - 44635573
Alignment:
Q  426 aatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 478  Q
    |||||| ||||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  44635520 aatcacgtaattcagtgtaattacaagtgtcggtgtcggtgtcggacacgacac 44635573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 457
Target Start/End: Original strand, 12224212 - 12224276
Alignment:
Q  393 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||| ||| |||||||||||| || ||||||| |||||| || | ||| |||||||||||    
T  12224212 tgacacgccaacatagctaataatttgaaaaaaaatcccataatccaatgtaattacaagtgtcg 12224276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 488
Target Start/End: Original strand, 35056922 - 35056958
Alignment:
Q  452 gtgtcgtgtcggtgtcagacacgacacgtatccgaca 488  Q
    |||||||||||||||| |||||||||||| |||||||    
T  35056922 gtgtcgtgtcggtgtcggacacgacacgtgtccgaca 35056958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 384 - 517
Target Start/End: Original strand, 15382459 - 15382593
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtat 482  Q
    |||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||||||  |||||||||| | |    
T  15382459 cacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcggtgttggacacgacacatgt 15382558  T
Q  483 ccgacaacaggacatgtataattcgaggagtgtca 517  Q
    |||||| | ||||| |  |||| ||||||||||||    
T  15382559 ccgacaccgggacacgcctaatccgaggagtgtca 15382593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 31084309 - 31084435
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-tgtcggtgtcagacacgacacgtatccga 486  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||||||| | ||| ||||||||||| |||| ||||| |||||||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttga--aaaaatcacataattcaatgtaattacaagtgtcgatgtc-gtgtcggacacgacacgtgtccga 31084405  T
Q  487 caacaggacatgtataattcgaggagtgtc 516  Q
    ||   |||||||  |||| |||||||||||    
T  31084406 cactgggacatgcctaatccgaggagtgtc 31084435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 39698524 - 39698631
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacac 478  Q
    |||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||| ||| ||||      ||||||||||||||||| |||||||||     
T  39698524 acggacactgacacgctgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacat 39698621  T
Q  479 gtatccgaca 488  Q
    ||||||||||    
T  39698622 gtatccgaca 39698631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 21522732 - 21522837
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||      |||||||||||||||| |||||||||    
T  21522732 cacggacactgacacgccgacacagctaataatttta--aaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgaca 21522829  T
Q  478 cgtatccg 485  Q
    ||| ||||    
T  21522830 cgtgtccg 21522837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 21533298 - 21533403
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||      |||||||||||||||| |||||||||    
T  21533298 cacggacactgacacgccgacacagctaataatttta--aaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgaca 21533395  T
Q  478 cgtatccg 485  Q
    ||| ||||    
T  21533396 cgtgtccg 21533403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 14674251 - 14674322
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  14674251 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 21191133 - 21191062
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||||    
T  21191133 cacggacactgacatgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 13287476 - 13287405
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| ||||| |||||||| ||||||||| ||  |||||||||||||||||| |||||||||||||||    
T  13287476 cacggacactaacacgtcgacacagataataatttgaa--aaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 496
Target Start/End: Original strand, 42893345 - 42893447
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccga 486  Q
    |||||| ||||| ||||||||||||||||||| ||  ||||||||||||| |||| ||| |||||||||     ||||||||||||| |||||| |||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaa--aaaatcacataatccagtgtaattacaagtgt-----cggtgtcagacacaacacgtgtccga 42893437  T
Q  487 caacaggaca 496  Q
    || |||||||    
T  42893438 caccaggaca 42893447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 457
Target Start/End: Original strand, 6247609 - 6247675
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||| |||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 397 - 457
Target Start/End: Original strand, 15883982 - 15884041
Alignment:
Q  397 acgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  15883982 acgccgacacagcaaataatttaaa-aaaaatcacataattcagtgtaattacaagtgtcg 15884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 4105239 - 4105310
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||| ||||||||||||||| | |||||||||| || ||| ||||||||||||||| ||| |||||||||    
T  4105239 cacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 457
Target Start/End: Original strand, 33178014 - 33178078
Alignment:
Q  391 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||| ||| |||||||||||    
T  33178014 actgacacgccgacacaactaataatttaa--aaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 21576822 - 21576751
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| ||||||| ||||| |||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  21576822 cacgaacactgatacgccaacacagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 7218334 - 7218273
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| ||||| |||||||||||||||||||  |||||||||||||| ||| |||||||||||    
T  7218334 gacacgtcgacagagctaataatttaaataaa--tcacataattcagtgtaattacaagtgtcg 7218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 488
Target Start/End: Original strand, 21542016 - 21542120
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgta 481  Q
    |||| ||||| ||||||||| ||||||||||||  ||| || |||||||||||| ||| |||||      |||||||||||||||| ||||||||||||     
T  21542016 gacattgacatgccgacacaactaataatttaa--aaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtg 21542113  T
Q  482 tccgaca 488  Q
    |||||||    
T  21542114 tccgaca 21542120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 457
Target Start/End: Complemental strand, 21351991 - 21351911
Alignment:
Q  375 cctaagaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| |||||| |||||||||||| |||||||| |||||||||  |  |||| |||||||||||||| ||| |||||||||||    
T  21351991 cctatgaagcatggacactgacacaccgacacaactaataattgga--aaaagtcacataattcagtgtaattacaagtgtcg 21351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Complemental strand, 19552620 - 19552569
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataatt 437  Q
    ||||||||||||||||||||||||| ||||||||| |  |||||||||||||||    
T  19552620 cacggacactgacacgccgacacagttaataatttga--aaaaatcacataatt 19552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 19579683 - 19579754
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||| |||||||||||||||||||||| |   |||||||||||||| |||  || |||||||||||    
T  19579683 cacggacactgatacgccgacacagctaataatttga--gaaaatcacataatttagtgcaattacaagtgtcg 19579754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 22013396 - 22013430
Alignment:
Q  384 cacggacactgacacgccgacacagctaataattt 418  Q
    |||||||||||||||||||||||||||||||||||    
T  22013396 cacggacactgacacgccgacacagctaataattt 22013430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 22299557 - 22299492
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaag 452  Q
    |||||| | |||||| ||||||||||||||||||||   ||||||||||| ||||||||||| ||||||    
T  22299557 cacggatattgacacaccgacacagctaataattta---aaaaatcacatgattcagtataattacaag 22299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 24906378 - 24906307
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| ||||||||||||| |||||| ||||||||| ||  ||||| |||||||||||| ||| |||||||||||    
T  24906378 cacgaacactgacacgccaacacagataataatttgaa--aaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 480
Target Start/End: Complemental strand, 5468017 - 5467961
Alignment:
Q  424 aaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgt 480  Q
    |||||||||||||||||| ||| || | ||||||||||||||||| | |||||||||    
T  5468017 aaaatcacataattcagtgtaattataggtgtcgtgtcggtgtcacatacgacacgt 5467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 8420011 - 8420080
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| ||||||||||||| |||||||||||| |  |||||| |||||||||| | ||| |||||||||||    
T  8420011 cggacaatgacacgccgacatagctaataatttga--aaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 420
Target Start/End: Complemental strand, 15410525 - 15410489
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaa 420  Q
    ||||||||||||||||||||||| |||||||||||||    
T  15410525 cacggacactgacacgccgacaccgctaataatttaa 15410489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 43001782 - 43001851
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||||||||| | |||||| ||||||||||| |  |||||| |||||||||||| ||| |||||||||    
T  43001782 cacggacactgacatgtcgacactgctaataatttga--aaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 441
Target Start/End: Original strand, 2952268 - 2952306
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2952268 gacacagctaataatttaaa-aaaaatcacataattcagt 2952306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 480
Target Start/End: Original strand, 12641657 - 12641756
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacac 478  Q
    ||||||| ||||||| ||||| || |||||||||||  ||||||||||||||| ||||||| | ||      |||||||||| |||||||||||| ||||    
T  12641657 acggacaatgacacgtcgacatagttaataatttaa--aaaaatcacataatttagtataattgcacgtgtcagtgtcgtgttggtgtcagacacaacac 12641754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 30135305 - 30135367
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||| |||||||||| || ||||||||||||| ||| | ||| |||||||||||    
T  30135305 gacacgccgacacaactaataatttgaa-aaaaatcacataactcattgtaattacaagtgtcg 30135367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 6770525 - 6770580
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||| | |||||| ||||||||||||   ||||||||||||||||||    
T  6770525 cacggacactgacacactgacacaactaataatttaa--gaaaatcacataattcagt 6770580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 36642839 - 36642805
Alignment:
Q  384 cacggacactgacacgccgacacagctaataattt 418  Q
    ||||||||||||||||||||||||| |||||||||    
T  36642839 cacggacactgacacgccgacacagttaataattt 36642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 37328921 - 37328850
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||| || |||||||||| ||||||||   ||||||||||| |||||||| ||| |||| ||||||    
T  37328921 cacggacactgatacaccgacacagcaaataattt--gtaaaaatcacaaaattcagtgtaattacatgtgtcg 37328850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 6326374 - 6326304
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||||||||||||||||||||  |||| |||||| |   ||||| |||||||||||| ||| ||||||||||    
T  6326374 cacggacactgacacgccgacatcgctagtaatttga--gaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Original strand, 7677681 - 7677742
Alignment:
Q  380 gaagcacggacactgacacg--ccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||| || ||||||  ||||||||||||||||||| |  |||||||||||||||||||    
T  7677681 gaagcacggaaacggacacggaccgacacagctaataatttga--aaaaatcacataattcagt 7677742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 14422889 - 14422939
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||| |||| |||||||||||||    ||||||||||||||||||||    
T  14422889 ggacactgacacaccgatacagctaataatt----taaaaatcacataattcagt 14422939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 10298553 - 10298622
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||||||||||| |||||||||| |  |||| ||||||||| || | ||| |||||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttga--aaaagtcacataatacaatgtaattacaagtgtcg 10298622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 17177098 - 17177029
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| ||||| |||||||||||||||| |  |||||||| | |||||| | ||| |||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttga--aaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 439
Target Start/End: Original strand, 41995457 - 41995506
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattca 439  Q
    |||||||||||||||||||| |||||||||  |  |||||||||||||||||    
T  41995457 gacactgacacgccgacacaactaataattcga--aaaaatcacataattca 41995506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 51793 - 51890
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||  |||||||||||||||||| |||| ||    
T  51793 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgt--tgtcggtgtcagacacgatacgtgtc 51888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 7e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 387 - 514
Target Start/End: Original strand, 24339627 - 24339758
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgt 480  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||      |||||||||||||||| ||||||||||||    
T  24339627 ggacattgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgt 24339724  T
Q  481 atccgacaacaggacatgtataattcgaggagtg 514  Q
    |||||||| | ||||| |  |||| |||||||||    
T  24339725 atccgacaccgggacacgcctaatccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 384 - 530
Target Start/End: Complemental strand, 43027546 - 43027402
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtat 482  Q
    |||||||||||||||| |||| ||||||||||||| |  |||||||||||||| |||| ||| |||||||||| ||||| |||||||||||||||||| |    
T  43027546 cacggacactgacacggcgacccagctaataatttga--aaaaatcacataatgcagtgtaaatacaagtgtcggtgtc-gtgtcagacacgacacgtgt 43027450  T
Q  483 ccgacaacaggacatgtataattcgaggagtgtcatttcttcatagcc 530  Q
    |||||| | ||||| |  |||| ||| |||||||  | ||||||||||    
T  43027449 ccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatagcc 43027402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 13770673 - 13770775
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-tgtcggtgtcagacacgacacgtat 482  Q
    |||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||| ||| ||||||||||| |||| ||||| ||||| |||||| |    
T  13770673 cacggacactgatacgccgacacagctaataatttaa--aaaaattacataattcagtgtaattacaagtgtcgttgtc-gtgtcggacacaacacgtgt 13770769  T
Q  483 ccgaca 488  Q
    ||||||    
T  13770770 ccgaca 13770775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 529
Target Start/End: Original strand, 21864788 - 21864928
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    ||||||||| ||||| | ||||||||||||||||| || |||||||| |||||| ||| ||| |||||||||||      |||| |||||||||||| ||    
T  21864788 cacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgc-----tgtcggacacgacacgtgtc 21864882  T
Q  484 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 529  Q
    ||||| | ||||| || ||||||||||||||||  | |||||||||    
T  21864883 cgacaccgggacacgtctaattcgaggagtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 387 - 516
Target Start/End: Complemental strand, 5409910 - 5409783
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccg 485  Q
    |||||||||||||| || |||||||||||||| |  |||||||||||||||||||  || |||||||||| ||||| ||||| |||||||||||| ||||    
T  5409910 ggacactgacacgctgatacagctaataatttga--aaaaatcacataattcagtgcaattacaagtgtcggtgtc-gtgtcggacacgacacgtgtccg 5409814  T
Q  486 acaacaggacatgtataattcgaggagtgtc 516  Q
    ||| | ||||| |  |||| |||||||||||    
T  5409813 acaccgggacacgcctaatccgaggagtgtc 5409783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 11061153 - 11061082
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||||||||| ||||||| |||||||||||    
T  11061153 cacggacactgacacaccgacacagctaataatttga--aaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 516
Target Start/End: Original strand, 15680794 - 15680916
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccga 486  Q
    ||||||||||||||||||| |||||||||||  || ||||||||||||||| ||| ||| || ||     ||||||||||| |||||||||||| |||||    
T  15680794 ggacactgacacgccgacatagctaataatt--aaaaaaaatcacataatttagtgtaattataa-----gtgtcggtgtcggacacgacacgtgtccga 15680886  T
Q  487 caacaggacatgtataattcgaggagtgtc 516  Q
    || |  |||| || ||||||||||||||||    
T  15680887 caccgagacacgtctaattcgaggagtgtc 15680916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 455
Target Start/End: Original strand, 25481887 - 25481953
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    ||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||    
T  25481887 ggacaatgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 454
Target Start/End: Complemental strand, 13557817 - 13557750
Alignment:
Q  388 gacactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtg 454  Q
    |||||||||||||||||| | |||||||||| ||| ||||||||||||||||||| ||| ||||||||    
T  13557817 gacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 21560484 - 21560556
Alignment:
Q  388 gacactgacacgccgacacagctaataattt---aaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||| ||||||||||||||    || ||||||||||||||||||| ||| |||||||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcg 21560556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 24105660 - 24105731
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||  ||| ||||||| ||| |||||||||||    
T  24105660 cacggacactgacacgccgacacagctaataatttga--aaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 488
Target Start/End: Original strand, 9778500 - 9778584
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccgaca 488  Q
    ||||||||| ||||||| ||  |||||||||||||||||||||| |||||||||| ||||| ||||| ||||| |||||| |||||||    
T  9778500 gacacagctgataatttgaa--aaaatcacataattcagtataattacaagtgtcggtgtc-gtgtcggacacaacacgtgtccgaca 9778584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 488
Target Start/End: Complemental strand, 32094093 - 32093995
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtatccgac 487  Q
    ||||| ||| ||| ||||| |||||||||| || ||||||||||||||||||| ||| ||||| |||| ||||| ||||| |||||||||||| ||||||    
T  32094093 acactaacatgccaacacaactaataatttgaa-aaaaatcacataattcagtgtaattacaaatgtcggtgtc-gtgtcggacacgacacgtgtccgac 32093996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 467
Target Start/End: Original strand, 43249975 - 43250056
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 467  Q
    ||||||||||||||||||||||| | ||||||||| |   ||||| ||||||| |||| ||| || ||||||||||||||||||    
T  43249975 cacggacactgacacgccgacacggataataatttga--gaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtc 43250056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 516
Target Start/End: Original strand, 7438693 - 7438824
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtat 482  Q
    ||||||||| |||||||||| ||||||||| ||  |||||||||||||||| | ||| |||||||||||      ||||||||||| ||||||||| | |    
T  7438693 acactgacatgccgacacagttaataatttgaa--aaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgt 7438790  T
Q  483 ccgacaacaggacatgtataattcgaggagtgtc 516  Q
     |||||  |||||| |  |||||| |||||||||    
T  7438791 gcgacactaggacacgcctaattcaaggagtgtc 7438824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 457
Target Start/End: Original strand, 3991322 - 3991377
Alignment:
Q  400 ccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  3991322 ccgacacaactaataatttgaa--aaaatcacataattcagtataattacaagtgtcg 3991377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 7197370 - 7197303
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| ||||||||||||||||||||||||||||  ||||||||  ||||||| | ||| |||||||||||    
T  7197370 gacattgacacgccgacacagctaataatttaa--aaaaatcatttaattcaatgtaattacaagtgtcg 7197303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 18215263 - 18215192
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| |||||||||| ||||||||||||| |  |||||||||||||| |||| ||  |||||||||||    
T  18215263 cacggacactaacacgccgacgcagctaataatttga--aaaaatcacataatgcagtgtagttacaagtgtcg 18215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 27945023 - 27945094
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||  |||||||||| |   ||||| |||||||||||| ||| |||||||||||    
T  27945023 cacggacactgacacgccgacaccactaataatttga--gaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 2334238 - 2334303
Alignment:
Q  392 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||| || ||||||||| || ||||||||||||||| ||| ||| |||||||||||    
T  2334238 ctgacacggcgacaaagttaataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcg 2334303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 381 - 418
Target Start/End: Complemental strand, 12010060 - 12010023
Alignment:
Q  381 aagcacggacactgacacgccgacacagctaataattt 418  Q
    |||||||||||||||||||| |||||||||||||||||    
T  12010060 aagcacggacactgacacgctgacacagctaataattt 12010023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 451 - 515
Target Start/End: Original strand, 9933326 - 9933389
Alignment:
Q  451 agtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgt 515  Q
    ||||||||||||||||| |||||||||| | || ||| ||| ||||||||||||| |||||||||    
T  9933326 agtgtcgtgtcggtgtcggacacgacacatgtctgac-acaagacatgtataatttgaggagtgt 9933389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 21930614 - 21930681
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||| ||||||||||||||   |||||| | |||||||| | ||| |||||||||||    
T  21930614 ggacactgacacgccgactcagctaataattta---aaaaattagataattcattttaattacaagtgtcg 21930681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 25822647 - 25822708
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||| |||||||||| || |||||||||  |||||||| ||| |||||||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcac--aattcagtgtaattacaagtgtcg 25822708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 26033516 - 26033432
Alignment:
Q  406 cagctaataatttaaataaaaatcacataattcagtataactacaagtg------tcgtgtcggtgtcagacacgacacgtatccga 486  Q
    ||||||||||||| ||  |||||||||||||||||| ||| ||||||||      |||||||||||||||||| ||||||| |||||    
T  26033516 cagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccga 26033432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 488
Target Start/End: Complemental strand, 11665508 - 11665409
Alignment:
Q  393 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg------tgtcggtgtcagacacgacacgtatccga 486  Q
    |||||||| |||||| |||||||||| ||  |||||||||||||||||| ||| || ||||||||      ||||||||||  ||||||||||| |||||    
T  11665508 tgacacgctgacacaactaataatttgaa--aaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccga 11665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 32308105 - 32308157
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttga--gaaaatcacataattcagt 32308157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 9408407 - 9408340
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||| ||||||||  ||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 26733286 - 26733341
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||| |||||| ||||||||||| |   ||||||||||||||||||    
T  26733286 cacggacactgacacgtcgacaccgctaataatttga--caaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 598256 - 598329
Alignment:
Q  457 gtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtcatttcttcatagcc 530  Q
    |||||||||||||||||||||||| ||||||| | ||||| |  |||| |||| ||||||  | ||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagcc 598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 473
Target Start/End: Original strand, 5938492 - 5938541
Alignment:
Q  424 aaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 473  Q
    ||||| |||||||||||||||| || | |||| |||||||||||||||||    
T  5938492 aaaataacataattcagtataattataggtgttgtgtcggtgtcagacac 5938541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 11722175 - 11722121
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcag 440  Q
    ||||||||||||||||||||||| ||||| ||||| |   |||||||||||||||||    
T  11722175 cacggacactgacacgccgacaccgctaacaatttga--gaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 18038981 - 18039052
Alignment:
Q  388 gacactgacacgccgacacagctaataat--ttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||  |||||||| ||||||||  ||  | ||||||||||||||||||| ||| |||||||||||    
T  18038981 gacactgacattccgacacaactaataataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 18039052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 24645466 - 24645588
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||||||| | |||||||||||||||||| || ||||||||||||||||||||||  |||||     |||||||||||||||||||||||| ||||||    
T  24645466 gacactgacatgtcgacacagctaataatttgaa-aaaaatcacataattcagtatagttacaa-----gtgtcggtgtcagacacgacacgtgtccgac 24645559  T
Q  488 aacaggacatgtataattcgaggagtgtc 516  Q
    | || |||| || |||| ||| |||||||    
T  24645560 accaagacacgtctaatccgaagagtgtc 24645588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 480
Target Start/End: Original strand, 12696306 - 12696400
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgt 480  Q
    ||||||||||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||||||| ||||| ||||| ||||||||||||    
T  12696306 cacggacactgacacgccgacacagctaataatttga--aaaaattacataattcagtgtaattacaagtgtcagtgtc-gtgtcggacacgacacgt 12696400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 387 - 488
Target Start/End: Original strand, 16766682 - 16766787
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgt 480  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||      |||||||||||||||| ||||| ||||||    
T  16766682 ggacactgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgt 16766779  T
Q  481 atccgaca 488  Q
     |||||||    
T  16766780 gtccgaca 16766787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 515
Target Start/End: Original strand, 28152081 - 28152204
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||| ||| |||||     ||||||||||| |||||||||||| ||    
T  28152081 cacggacactgacacgccgacaaagctaataattt---gaaaaatcacataattcagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 28152172  T
Q  484 cgacaacaggacatgtataattcgaggagtgt 515  Q
    ||||| | ||||| |  |||| ||||||||||    
T  28152173 cgacaccgggacaggcctaatccgaggagtgt 28152204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 387 - 478
Target Start/End: Complemental strand, 10770748 - 10770659
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 478  Q
    ||||||||||||||| ||||| |||||||||| ||  |||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcggtgtc-gtgtcagacacgacac 10770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 457
Target Start/End: Complemental strand, 27904114 - 27904042
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||    
T  27904114 acggacattgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcg 27904042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 17841666 - 17841598
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg 454  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||| ||| ||| ||||||||    
T  17841666 cacggacactgacacgccgacacagctaataatttga--aaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 9107447 - 9107376
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||||| |||||||| ||| |||||||||||    
T  9107447 cacggacactaacacgccgacacagctaataatttga--aaaaatcacaaaattcagtgtaattacaagtgtcg 9107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 34595116 - 34595187
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||||||||||||| |||||||||| |  ||||||||||||||||||| ||| |||||||||||    
T  34595116 cacggacaatgacacgccgacacaactaataatttga--aaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 528
Target Start/End: Original strand, 8713971 - 8714110
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||| |||||||| ||||||||| || ||||||||||||||||||| ||| |||||      |||||||||||||||| |||||||||| | ||||||    
T  8713971 gacacgtcgacacagttaataatttgaa-aaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgac 8714069  T
Q  488 aacaggacatgtataattcgaggagtgtcatttcttcatag 528  Q
    | | ||||| |   ||| ||||||||||| || ||||||||    
T  8714070 atcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 496
Target Start/End: Original strand, 16833294 - 16833395
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||||||||||||||||| |||||||||| |  |||||||||||| |||||| ||| |||||     |||||||||| ||||||||||||  ||||||    
T  16833294 gacactgacacgccgacacaactaataatttga--aaaaatcacatacttcagtgtaattacaa-----gtgtcggtgttagacacgacacgcgtccgac 16833386  T
Q  488 aacaggaca 496  Q
    | |||||||    
T  16833387 accaggaca 16833395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 467
Target Start/End: Original strand, 3209367 - 3209446
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtc 467  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||| ||| | | |||||||||| |||||||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaa-aaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtc 3209446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 516
Target Start/End: Original strand, 4877924 - 4878049
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||| | |||||| ||||||||||||||||||| || |||| |||||||||| ||||||| |||||     ||||||||||| |||||||||| | ||    
T  4877924 cacggatagtgacacaccgacacagctaataatttgaa-aaaagtcacataattaagtataattacaa-----gtgtcggtgtcggacacgacacatgtc 4878017  T
Q  484 cgacaacaggacatgtataattcgaggagtgtc 516  Q
    |||| |||||||| |  |||| |||||||||||    
T  4878018 cgac-acaggacacgcctaatccgaggagtgtc 4878049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 488
Target Start/End: Complemental strand, 8365596 - 8365488
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    |||||||||||||||||||||||| |||||||||| |  ||| |||||||||||| || ||| |||||      ||||||||||||| || |||||||||    
T  8365596 cacggacactgacacgccgacacaactaataatttga--aaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgaca 8365499  T
Q  478 cgtatccgaca 488  Q
    ||| |||||||    
T  8365498 cgtgtccgaca 8365488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 8777050 - 8776981
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||||| |||||||| ||| |||||||||    
T  8777050 cacggacactgacacgccgacacaactaataatttga--aaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 457
Target Start/End: Complemental strand, 7977900 - 7977836
Alignment:
Q  391 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||||||| |  |||||| |||||||||||| ||| |||||||||||    
T  7977900 actgacacgccgacacagctaataatttga--aaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 426591 - 426520
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| | | ||| |||||||||||    
T  426591 cacggacactgacacgccgacacagttaataatttga--aaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 9658861 - 9658916
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  9658861 cacggacactgacacgccgacaccgctaataatttaa--gaaaatcacataattcagt 9658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 31959141 - 31959212
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| |||||||||||||| ||||||||||||||| |  |||||||||||||| |||| ||| |||||||||||    
T  31959141 cacgaacactgacacgccgtcacagctaataatttga--aaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 516
Target Start/End: Complemental strand, 32978967 - 32978851
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaacagg 493  Q
    ||||||||||||||||||||||||| || ||||| ||||||||| ||| ||| |||||     ||||||||||| |||||||||| | ||||||| | ||    
T  32978967 gacacgccgacacagctaataatttgaa-aaaaaacacataattaagtgtaattacaa-----gtgtcggtgtcggacacgacacatgtccgacaccggg 32978874  T
Q  494 acatgtataattcgaggagtgtc 516  Q
    ||| || |||| | |||||||||    
T  32978873 acacgtctaatccaaggagtgtc 32978851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 515
Target Start/End: Complemental strand, 5000632 - 5000568
Alignment:
Q  451 agtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgt 515  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||||| || |||| ||| ||||||    
T  5000632 agtgtcatgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgt 5000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 488
Target Start/End: Complemental strand, 5970181 - 5970077
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgta 481  Q
    ||||| |||||| |||||||| ||||||||| ||  |||||||||||||||||| ||| |||||      |||||||||||||||| |||||||||| |     
T  5970181 gacacggacacgtcgacacagttaataatttgaa--aaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatt 5970084  T
Q  482 tccgaca 488  Q
    |||||||    
T  5970083 tccgaca 5970077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 17302538 - 17302609
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||| |||||||||||| |||||| |||||||||| || ||||||||||||||||| | ||| ||||||||||    
T  17302538 cacgaacactgacacgctgacacaactaataatttgaa-aaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 384 - 441
Target Start/End: Original strand, 3398601 - 3398655
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||||||||||||||||||||||    |||||||| ||||||||||    
T  3398601 cacggacactgacacgccgacacagctaataattt---gaaaaatcatataattcagt 3398655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 7938101 - 7938169
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||||||||||| |  |||||||| |||||| ||| ||| || ||||||||    
T  7938101 ggacactgacacgccgacacagctaataatttga--aaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 451
Target Start/End: Complemental strand, 31429076 - 31429015
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa 451  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||| |||||    
T  31429076 gacactgacacgcc-acccagctaataatttaaa-aaaaatcacataattcagtgtaattacaa 31429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 457
Target Start/End: Complemental strand, 9911587 - 9911534
Alignment:
Q  403 acacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||    
T  9911587 acacagctaataatttaaa-agaaatcacataattcagtgtaattacaagtgtcg 9911534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 457
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||| ||||||||||||| |||||||||| ||  |||||||| ||||||||| ||| |||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaa--aaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 457
Target Start/End: Complemental strand, 7801228 - 7801162
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||| ||||||||||||| |||||||||| ||  |||||||||||||||||  ||| |||||||||||    
T  7801228 acactaacacgccgacacaactaataatttgaa--aaaatcacataattcagcgtaattacaagtgtcg 7801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 17435181 - 17435250
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||||||| ||| ||||| |||||||||||| |  |||||| |||||||||||| ||| |||||||||    
T  17435181 cacggacactgatacgtcgacatagctaataatttta--aaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 853928 - 853865
Alignment:
Q  392 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||| |||||||||| |  ||||||||||||||| |||  || |||||||||||    
T  853928 ctgacacgccgacacaactaataatttga--aaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 9027160 - 9027194
Alignment:
Q  384 cacggacactgacacgccgacacagctaataattt 418  Q
    ||||||||||||||||||||||| |||||||||||    
T  9027160 cacggacactgacacgccgacaccgctaataattt 9027194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 457
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  409 ctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  9522898 ctaataatttaaa--aaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 17341741 - 17341671
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||| ||||||||||||||||| | ||||||||| |   |||||||||||||||||| ||| || |||||||    
T  17341741 cacgggcactgacacgccgacaccgttaataatttga--taaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 421
Target Start/End: Original strand, 23771561 - 23771598
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaa 421  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  23771561 cacggacacggacacgccgacacagttaataatttaaa 23771598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 457
Target Start/End: Complemental strand, 1191763 - 1191706
Alignment:
Q  398 cgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||| |  |||| ||||| |||||||| ||| |||||||||||    
T  1191763 cgccgacacagctaataatttga--aaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 7265668 - 7265615
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||| |||| ||||||||||| |   ||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttga--gaaaatcacataattcagt 7265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 24115918 - 24115865
Alignment:
Q  390 cactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataa 445  Q
    ||||||||||| |||||| |||||||||| |  ||||||||||||||||| |||||    
T  24115918 cactgacacgctgacacaactaataatttca--aaaaatcacataattcaatataa 24115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 71709 - 71843
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactac------aagtgtcgtgtcggtgtcagacacgacacgta 481  Q
    ||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||| |||       ||||||||||||||||| ||||| ||||||     
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtg 71808  T
Q  482 tccgacaacaggacatgtataattcgaggagtgtc 516  Q
    ||||||| | ||||| |  |||| |||||||||||    
T  71809 tccgacaccgggacacgactaatccgaggagtgtc 71843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 389 - 516
Target Start/End: Complemental strand, 4987363 - 4987232
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt------cgtgtcggtgtcagacacgacacgtat 482  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||      |||||||||||  |||||||||||| |    
T  4987363 acactgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgt 4987266  T
Q  483 ccgacaacaggacatgtataattcgaggagtgtc 516  Q
    |||||| | ||||| |  |||| |||||||||||    
T  4987265 ccgacaccgggacacgcctaatccgaggagtgtc 4987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 385 - 529
Target Start/End: Original strand, 27505229 - 27505371
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-tgtcggtgtcagacacgacacgtatc 483  Q
    ||||| || |||| ||||||||||||||||||||   |||||||||||||||| ||| ||| ||||||||||| ||||| |||| |||||||||||| ||    
T  27505229 acggatacggacaagccgacacagctaataatttt--taaaaatcacataattaagtgtaattacaagtgtcggtgtcg-tgtctgacacgacacgtgtc 27505325  T
Q  484 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 529  Q
    ||||| | |||||||  |||| |||||||||||  | |||||||||    
T  27505326 cgacaccgggacatgcctaatccgaggagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 21479104 - 21479193
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 478  Q
    ||||||||||||||||||||||||||||||| |  |||||||||| |||||||| ||| ||| |||||| ||||||||||| ||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttga--aaaaatcacacaattcagtgtaattactagtgtcggtgtcggtgtcggacacgacac 21479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 16000089 - 16000022
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||| ||||||||||||  |||||| |||||||||||| |||||||||||||||    
T  16000089 gacactgacacgccgacacaactaataatttaa--aaaaataacataattcagtgtaactacaagtgtcg 16000022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 28917983 - 28918054
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| ||||||||||||||| |||||||||||| |  ||||||||||||||||||| ||| |||||||||||    
T  28917983 cacggaaactgacacgccgacatagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 35994811 - 35994738
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcgg 463  Q
    ||||| ||||| |||||||||||||||||||| ||   ||||||||||||||||| ||| |||||||||||||||||    
T  35994811 ggacaatgacaagccgacacagctaataatttgaa---aaatcacataattcagtgtaattacaagtgtcgtgtcgg 35994738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 529
Target Start/End: Original strand, 55401057 - 55401195
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||||||||| ||||||||||| |||||||||| |  ||||||||||||||| ||| ||| |||||     ||||||||||| |||||||||||| ||    
T  55401057 cacggacactgatacgccgacacaactaataatttga--aaaaatcacataatttagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 55401149  T
Q  484 cgacaacaggacatgtataattcgaggagtgtcatttcttcatagc 529  Q
    ||||| |  |||| |  |||| |||||||||||  | |||||||||    
T  55401150 cgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagc 55401195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 10954934 - 10955031
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||| ||||||||||||||||||| |||||||||| |  ||||||||||||||||||| |||  ||||     ||||||||||| |||||||||||| ||    
T  10954934 cacgaacactgacacgccgacacaactaataatttga--aaaaatcacataattcagtgtaatcacaa-----gtgtcggtgtcggacacgacacgtgtc 10955026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 14747547 - 14747610
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaag 452  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||| ||| ||| ||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaa-aaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 457
Target Start/End: Original strand, 26508099 - 26508163
Alignment:
Q  391 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  26508099 actgacacgctgacacagctaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 8587098 - 8587027
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||| ||| |||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  8587098 cacggacactgacacgccgacacatctagtaatttga--aaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 456
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||| ||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttga--aaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 480
Target Start/End: Original strand, 14209105 - 14209195
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacacgt 480  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||| ||| ||||      ||||||||||||||||| ||||||||||||    
T  14209105 gacacgccgacacaactaataattttaa--aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgt 14209195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 480
Target Start/End: Complemental strand, 34307846 - 34307763
Alignment:
Q  395 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgt 480  Q
    |||||| ||||| ||||||||||| |   ||||||||||| |||||| ||| || |||||||||||||||||| ||||||||||||    
T  34307846 acacgctgacaccgctaataatttgag--aaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtcggacacgacacgt 34307763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 457
Target Start/End: Complemental strand, 21257058 - 21256992
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| ||||||  ||||||||||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  21257058 acaccgacacgatgacacagctaataatttgaa--aaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 488
Target Start/End: Original strand, 14832077 - 14832189
Alignment:
Q  380 gaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacac 473  Q
    |||||||||| || |||||||||| |||||||||||||| |  ||||||||||||| ||| | ||| ||||      |||||||||||||| || |||||    
T  14832077 gaagcacggatacggacacgccgatacagctaataatttga--aaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacac 14832174  T
Q  474 gacacgtatccgaca 488  Q
    ||||||| |||||||    
T  14832175 gacacgtgtccgaca 14832189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 439
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattca 439  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttga--aaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 14829676 - 14829742
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||   ||| |||||||||||    
T  14829676 gacactgacacgccgacacagctaataattt---gaaaaatcacataattcatggtaattacaagtgtcg 14829742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 516
Target Start/End: Original strand, 28812499 - 28812633
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacac 478  Q
    |||||||| |||||||||||||| |||||||||| |  | ||||||||||||||||| ||  |||||      ||||||||| |||||||||||||| ||    
T  28812499 acggacac-gacacgccgacacaactaataatttga--agaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatac 28812595  T
Q  479 gtatccgacaacaggacatgtataattcgaggagtgtc 516  Q
     | ||||||| ||||||| |  |||| |||||||||||    
T  28812596 atgtccgacagcaggacacgcctaatccgaggagtgtc 28812633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 3865633 - 3865599
Alignment:
Q  384 cacggacactgacacgccgacacagctaataattt 418  Q
    |||||||||||||||||||||||||||||||||||    
T  3865633 cacggacactgacacgccgacacagctaataattt 3865599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Complemental strand, 10318111 - 10318077
Alignment:
Q  384 cacggacactgacacgccgacacagctaataattt 418  Q
    |||||||||||||||||||||||||||||||||||    
T  10318111 cacggacactgacacgccgacacagctaataattt 10318077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 10335363 - 10335292
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||| |||||||||| |  |||| ||||||| || ||| ||| |||||||||||    
T  10335363 cacggacactgacacgccgacacaactaataatttga--aaaagtcacatattttagtgtaaatacaagtgtcg 10335292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 11610510 - 11610573
Alignment:
Q  391 actgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||||||| ||  ||||||||||    
T  11610510 actgacacgccaacaccgctaataatttaa--aaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 15796371 - 15796300
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| |||||||||||||||| ||||||||| |  |||||||| |||||||||| ||| ||||| |||||    
T  15796371 cacggacaatgacacgccgacacagttaataatttga--aaaaatcatataattcagtgtaattacaattgtcg 15796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 20503451 - 20503518
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||| | |||||||| |  |||||| |||||||||||| ||| |||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttga--aaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 25775493 - 25775562
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||| |||||  ||||||||| || || |||||||||||||||| ||| |||||||||||    
T  25775493 ggacactgacacgccaacacatttaataatttgaa-aataatcacataattcagtgtaattacaagtgtcg 25775562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 453
Target Start/End: Complemental strand, 26492282 - 26492215
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 453  Q
    |||||||||||||||||||||| |||||||||||| |  |||||||| | |||||||| ||| |||||||    
T  26492282 cacggacactgacacgccgacagagctaataatttga--aaaaatcatacaattcagtgtaattacaagt 26492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 34185196 - 34185129
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| |||||||||||||| ||||||||||| ||  ||||||||| |||||||| ||| |||||||||||    
T  34185196 gacagtgacacgccgacacggctaataatttcaa--aaaatcacacaattcagtgtaattacaagtgtcg 34185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 39756222 - 39756289
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||| |  ||||||||||||  |||||||||||||| | ||||| |||||||||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaa--aaaatcacataatttaatataattacaagtgtcg 39756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 14216874 - 14216944
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||||||| ||||||| |||||||||| |  ||| |||| |||||||||| ||| ||||||||||    
T  14216874 cacggacactgacacgtcgacacaactaataatttta--aaatatcatataattcagtgtaattacaagtgtc 14216944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 14223003 - 14223073
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||||||| ||||||| |||||||||| |  ||| |||| |||||||||| ||| ||||||||||    
T  14223003 cacggacactgacacgtcgacacaactaataatttta--aaatatcatataattcagtgtaattacaagtgtc 14223073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 3164102 - 3164033
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||| || |||| |||||||||||||||||| |  ||||||||||||||||||| |||  ||||||||    
T  3164102 cacggacaatggcacgtcgacacagctaataatttga--aaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 463
Target Start/End: Complemental strand, 24205118 - 24205041
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcgg 463  Q
    ||||||||||||||||||||||| | ||||||||| |   ||||| ||||||| |||| ||| || ||||||||||||||    
T  24205118 cacggacactgacacgccgacacggataataatttga--gaaaatgacataatacagtgtaattataagtgtcgtgtcgg 24205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 25948964 - 25948895
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||||||||||||| ||||| || ||||||||||| |  ||||||||||||||||||| ||| || ||||||    
T  25948964 cacggacactgacatgccgatacggctaataatttga--aaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 457
Target Start/End: Original strand, 34910309 - 34910370
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||| ||| |||||| ||||    
T  34910309 gacacgccgacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagagtcg 34910370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 40993409 - 40993287
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    ||||| |||||  |||||| |||||||||||||| ||||||||||||||||||| ||| || |      ||||||||||| |||||||||| | ||||||    
T  40993409 gacacggacacctcgacaccgctaataatttaaa-aaaaatcacataattcagtgtaattata-----tgtgtcggtgtcggacacgacacatgtccgac 40993316  T
Q  488 aacaggacatgtataattcgaggagtgtc 516  Q
    | | ||||| |  |||| |||||||||||    
T  40993315 accgggacacgcctaatccgaggagtgtc 40993287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 51206412 - 51206359
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  51206412 gacacagctaataatttgaa--aaaatcacataattcagtgtaaatacaagtgtcg 51206359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 458
Target Start/End: Original strand, 3610619 - 3610687
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgt 458  Q
    |||||||||||||| |||||| |||||||||||  |||||| |||||| ||||| ||| ||| ||||||||    
T  3610619 gacactgacacgccaacacagttaataatttaa--aaaaataacataactcagtgtaattaccagtgtcgt 3610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 5339128 - 5339187
Alignment:
Q  424 aaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    |||||||||||||| | | |||  ||||||||||| |||||||| |||||||||||||||    
T  5339128 aaaatcacataatttaatgtaaaaacaagtgtcgtatcggtgtcggacacgacacgtatc 5339187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 8593136 - 8593190
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| ||||||  | ||||||||||||||||||||||| |||||||||||    
T  8593136 gacacagctactaatttgga-aaaaatcacataattcagtataattacaagtgtcg 8593190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 14979166 - 14979218
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||| || ||||||||||||||||||||||| |  |||||||||||||||||||    
T  14979166 ggacaatggcacgccgacacagctaataatttga--aaaaatcacataattcagt 14979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 8383239 - 8383310
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| |||||||||||||| ||||||||||| |   ||||||| |||||||||| ||| || ||||||||    
T  8383239 cacggacattgacacgccgacaccgctaataatttga--gaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 1509539 - 1509592
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  1509539 gacacagctaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 1509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 32400780 - 32400748
Alignment:
Q  386 cggacactgacacgccgacacagctaataattt 418  Q
    |||||||||||||| ||||||||||||||||||    
T  32400780 cggacactgacacggcgacacagctaataattt 32400748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 457
Target Start/End: Complemental strand, 49651853 - 49651792
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| |||||||| ||||||||||| ||  |||||||||||||||| | ||| |||||||||||    
T  49651853 gacatgccgacacggctaataatttgaa--aaaatcacataattcactgtaattacaagtgtcg 49651792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 6e-20; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 384 - 516
Target Start/End: Complemental strand, 1486786 - 1486656
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacgtat 482  Q
    |||||| |||||||||| ||||||||||||||||| |  ||||||||||||||||||| ||| || ||||||| ||||| ||||| |||||||||||| |    
T  1486786 cacggatactgacacgctgacacagctaataatttga--aaaaatcacataattcagtgtaattataagtgtcggtgtc-gtgtcggacacgacacgtgt 1486690  T
Q  483 ccgacaacaggacatgtataattcgaggagtgtc 516  Q
    |||||| | ||||| |  |||| |||||||||||    
T  1486689 ccgacaccgggacacgcctaatccgaggagtgtc 1486656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 18471280 - 18471353
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| |||| || |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  18471280 cacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcg 18471353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 374 - 488
Target Start/End: Complemental strand, 22515974 - 22515867
Alignment:
Q  374 gcctaagaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacac 473  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||| |  ||||||||||||||| ||| ||| |||||     ||||||||||| |||||    
T  22515974 gcctatgaagcacggacacggacacgcagacacagctaataatttga--aaaaatcacataatttagtgtaattacaa-----gtgtcggtgtcggacac 22515882  T
Q  474 gacacgtatccgaca 488  Q
    ||||| |||||||||    
T  22515881 gacacatatccgaca 22515867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 5944267 - 5944336
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||| || ||||||||    
T  5944267 gacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 31694785 - 31694716
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||| ||||| |||||||||||| || ||||||||||||||||||||||| |||||||||||    
T  31694785 gacactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcg 31694716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 488
Target Start/End: Complemental strand, 46348460 - 46348363
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||| |||||| ||| ||| |||||     ||||||||||| |||||||||||| ||    
T  46348460 cacggacactgacacgccgacacagctaataatttga--aaaaatcatataatttagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 46348368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 488
Target Start/End: Complemental strand, 18556533 - 18556425
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    ||||||||||||||||||||||||||||||||||| |  ||| ||||||||||| | | ||| |||||      |||||||| ||||||||||| |||||    
T  18556533 cacggacactgacacgccgacacagctaataatttga--aaatatcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgaca 18556436  T
Q  478 cgtatccgaca 488  Q
    |||||||||||    
T  18556435 cgtatccgaca 18556425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 394 - 488
Target Start/End: Original strand, 51410016 - 51410104
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgaca 488  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| ||| |||||||||     ||||||| ||||||||||||||||||||    
T  51410016 gacatgccgacacatctaataatttgaa-aaaaatcacataattcagtgtaattacaagtgt-----cggtgtcggacacgacacgtatccgaca 51410104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 456
Target Start/End: Original strand, 6427447 - 6427516
Alignment:
Q  388 gacactgacacgccgacacagctaataattt-aaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||| | ||||||||||||||    
T  6427447 gacactgacatgccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtc 6427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 392 - 455
Target Start/End: Original strand, 113289 - 113350
Alignment:
Q  392 ctgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||| ||| |||||||||    
T  113289 ctgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 47989484 - 47989615
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgta 481  Q
    ||||||||||||||||||||  ||||||||||||  |||||||||||||||||| ||| |||||      |||||||||||||||| |||||||||| |     
T  47989484 gacactgacacgccgacacaa-taataatttaaa--aaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatg 47989580  T
Q  482 tccgacaacaggacatgtataattcgaggagtgtc 516  Q
    || |||| | ||||| |  |||| |||||||||||    
T  47989581 tctgacatcgggacacgcctaatccgaggagtgtc 47989615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 455
Target Start/End: Complemental strand, 13011293 - 13011223
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||| ||||||||| |||||||||||||||||||| || ||||||||||||||| ||| ||| |||||||||    
T  13011293 cacgaacactgacatgccgacacagctaataatttgaa-aaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 516
Target Start/End: Original strand, 37598816 - 37598938
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccg 485  Q
    |||||||||||||||||||||| |||||||||| |  |||||||||| |||||||| ||| || ||     ||||||||||| |||||||||||| ||||    
T  37598816 cggacactgacacgccgacacaactaataatttga--aaaaatcaca-aattcagtgtaattataa-----gtgtcggtgtcggacacgacacgtgtccg 37598907  T
Q  486 acaacaggacatgtataattcgaggagtgtc 516  Q
    ||||  ||||| |  |||| |||||||||||    
T  37598908 acaatgggacacgcctaatccgaggagtgtc 37598938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 398842 - 398787
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||||||||||| ||||||||||| |  |||||||||||||||||||    
T  398842 cacggacactgacacgccgacaccgctaataatttga--aaaaatcacataattcagt 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 22881689 - 22881622
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||| |||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttga--aaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 38078738 - 38078667
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||| ||||||||||| |||||||||||||||||| |  ||||||||||||||||| | ||| |||||||||||    
T  38078738 cacgaacactgacacgtcgacacagctaataatttga--aaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 42359526 - 42359455
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||| |||||| |||||||||| |  |||||||||| |||||||| ||| |||||||||||    
T  42359526 cacggacactgacacgctgacacatctaataatttga--aaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 48450664 - 48450593
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||| |||||||||||||||| |  |||||| |||||||| ||| ||| |||||||||||    
T  48450664 cacggacactgacacgccaacacagctaataatttga--aaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 457
Target Start/End: Original strand, 1815240 - 1815310
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||||||||||  |||| |||| ||  |||||||||||||||||| ||| |||||||||||    
T  1815240 acggacactgacacgccgacacaaataattattttaa--aaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 457
Target Start/End: Complemental strand, 19058924 - 19058862
Alignment:
Q  393 tgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||||||  ||| || |||||||||||| ||| |||||||||||    
T  19058924 tgacacgccgacacagctaataatttaa--aaagataacataattcagtgtaattacaagtgtcg 19058862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 516
Target Start/End: Complemental strand, 40258973 - 40258885
Alignment:
Q  423 aaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 516  Q
    ||||||||||||||||||| ||| |||||||||||     |||||||||||||||| | ||||||| ||||||| |  |||| |||||||||||    
T  40258973 aaaaatcacataattcagtgtaattacaagtgtcg-----gtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtc 40258885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 9103624 - 9103692
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||| ||||||||| |  ||||||||||||||| ||| ||| |||||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttga--aaaaatcacataatttagtttaa-tacaagtgtcg 9103692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 452 - 516
Target Start/End: Original strand, 9828098 - 9828162
Alignment:
Q  452 gtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 516  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||| || |||| |||||||||||    
T  9828098 gtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtc 9828162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 453
Target Start/End: Complemental strand, 31672969 - 31672905
Alignment:
Q  387 ggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagt 453  Q
    |||||||||||| ||||||||||||||||||| |  ||||||||| ||||||||| ||| |||||||    
T  31672969 ggacactgacacaccgacacagctaataatttga--aaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 488
Target Start/End: Original strand, 52284702 - 52284792
Alignment:
Q  402 gacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg-----tgtcggtgtcagacacgacacgtatccgaca 488  Q
    |||||||||||||||||||| |||||  | |||||||||||||| |||||||||||     | ||||||||||||||||||| | |||||||    
T  52284702 gacacagctaataatttaaa-aaaaaaaatataattcagtataattacaagtgtcggtgaatatcggtgtcagacacgacacatgtccgaca 52284792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 2896198 - 2896143
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  2896198 cacggacactgacacgccgacaccgctaataatttga--gaaaatcacataattcagt 2896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 5376577 - 5376506
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| |||||||||||| |||||||||||||   ||||| |||||||||||| ||| || ||||||||    
T  5376577 cacggacactaacacgccgacaccgctaataatttaa--gaaaataacataattcagtgtaattaaaagtgtcg 5376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 6612248 - 6612177
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||||||||| |||| ||||||||| ||  ||||| |||||||||||| ||| |||||||||||    
T  6612248 cacggacaatgacacgccgatacagttaataatttgaa--aaaattacataattcagtgtaattacaagtgtcg 6612177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 12443541 - 12443482
Alignment:
Q  380 gaagcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||| || ||||||||||||||||||||||||| |   ||||||||||||||||||    
T  12443541 gaagcacggatacggacacgccgacacagctaataatttga--gaaaatcacataattcagt 12443482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 456
Target Start/End: Complemental strand, 14359594 - 14359529
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    ||||| |||||||||||||||||||||||||    ||||||||||||||| ||| ||| ||||||||||    
T  14359594 gacacggacacgccgacacagctaataattt---gaaaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 457
Target Start/End: Complemental strand, 24577259 - 24577192
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||| ||||||| |||||| |||||||||| ||  |||||||||||||||||| ||| |||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 31015025 - 31015096
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||| ||||||| |||| |||||||||||||||| |   |||||||||||||||||| ||| |||||||||||    
T  31015025 cacgggcactgacgcgcctacacagctaataatttgag--aaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 457
Target Start/End: Complemental strand, 1705068 - 1704998
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||| |||||||| |||||||||| ||  |||||||||||||||||  ||| |||||||||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaa--aaaatcacataattcagggtaattacaagtgtcg 1704998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 5898339 - 5898218
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||||| |||||||||| ||||||||| | ||  |||||||||||||||||| ||| || | | ||||     |||||||||||||||||| ||| ||    
T  5898339 gacactgagacgccgacaccgctaataatctgaa--aaaatcacataattcagtgtaattatatgcgtcg-----gtgtcagacacgacacgtgtccaac 5898247  T
Q  488 aacaggacatgtataattcgaggagtgtc 516  Q
    | | ||||| || |||| |||||||||||    
T  5898246 accgggacacgtctaatccgaggagtgtc 5898218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 448
Target Start/End: Complemental strand, 15641107 - 15641045
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataacta 448  Q
    |||||||||||||| |||||||| |||||||||||||   |||||||||| ||||||| ||||||    
T  15641107 cacggacactgacatgccgacactgctaataatttaa--gaaaatcacatgattcagtgtaacta 15641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 26526835 - 26526762
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||| |||| |  || |||||||||||||||| ||||| ||||||||| | ||||| |||||||||||    
T  26526835 cacggacactaacacactaacgcagctaataatttaaaaaaaaaacacataatttaatataattacaagtgtcg 26526762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 40917733 - 40917839
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    |||||| |||||||||||||||||||||||||||| |  |||||||||  |||| ||| ||| |||||      |||||||||||||||  |||||||||    
T  40917733 cacggatactgacacgccgacacagctaataatttga--aaaaatcac--aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgaca 40917828  T
Q  478 cgtatccgaca 488  Q
    ||| |||||||    
T  40917829 cgtgtccgaca 40917839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 48040539 - 48040467
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||||||||||||||| ||||||||| || |||  ||||||| || ||| ||| |||||||||||    
T  48040539 cacggacactgacacgccgacacagataataatttgaa-aaaggtcacatattttagtgtaaatacaagtgtcg 48040467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 24334781 - 24334711
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||| ||||| |||||||||||||| |||| || ||||||  ||||||||||| ||| |||||||||||    
T  24334781 cggacacggacacaccgacacagctaatcatttgaaaaaaaat-gcataattcagtgtaattacaagtgtcg 24334711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 1262866 - 1262925
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataa 445  Q
    |||| |||| ||||||||||||||||||||||||| |   |||||||||||||||| |||||    
T  1262866 cacgaacacggacacgccgacacagctaataatttga--gaaaatcacataattcaatataa 1262925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 13997869 - 13997920
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||||||| | |||| ||||||  |||||||||||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaa--aaaaatcacataattcagt 13997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 21378560 - 21378631
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||  ||||| |||||||||||||||| || ||  ||||| |||||||||||| ||| |||||||||||    
T  21378560 cacggacatggacacaccgacacagctaataaattgaa--aaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 36878447 - 36878498
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    ||||||||||||||||||| ||||||||||| |   ||||||||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttga--gaaaatcacataattcagt 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 439
Target Start/End: Original strand, 6427331 - 6427385
Alignment:
Q  383 gcacggacactgacacgccgacacagctaataatttaaataaaaatcacataattca 439  Q
    ||||||||||||||||||| |||| ||||||||||| |   ||||||||||||||||    
T  6427331 gcacggacactgacacgccaacaccgctaataatttga--gaaaatcacataattca 6427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 9033085 - 9033029
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagt 441  Q
    |||||||||||||||| | ||||  |||||||||| || |||||||||||||||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaa-aaaaatcacataattcagt 9033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 456
Target Start/End: Complemental strand, 29144431 - 29144365
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||| |||||||||||||||||||||| || |||||| | ||||| |||| ||| ||||||||||    
T  29144431 gacactgatacgccgacacagctaataatttgaa-aaaaat-agataatgcagtgtaattacaagtgtc 29144365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 488
Target Start/End: Original strand, 19562 - 19659
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    |||||||||||||||| ||| |||||||||| ||   ||||||||||||||||| ||| |||||||||  |||||||||  |||||||||||| ||||||    
T  19562 gacactgacacgccgatacaactaataatttgaa---aaatcacataattcagtgtaattacaagtgttatgtcggtgttggacacgacacgtgtccgac 19658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 479
Target Start/End: Original strand, 13382 - 13476
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacg 479  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||||||||  || |||||| ||| ||||||||||| |||||||||||    
T  13382 cacggacactgacacgccgacacaactaataatttga--gaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacg 13476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 20154 - 20224
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||| ||| ||||||||||    
T  20154 cacggacaatgacacgccgacacagctaataatttga--aaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 479
Target Start/End: Complemental strand, 21945 - 21851
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacacg 479  Q
    |||||||||||||||||||||||| |||||||||| |   ||||||||||||||||||  || |||||| ||| ||||||||||| |||||||||||    
T  21945 cacggacactgacacgccgacacaactaataatttga--gaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacg 21851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 389 - 457
Target Start/End: Original strand, 123612 - 123681
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaa-aatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcg 123681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 92790 - 92859
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||||||||||||| ||||||||||| |   ||||| |||||||||||| ||| ||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttga--gaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 8780 - 8877
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatc 483  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||| || ||| ||| ||| |||||     ||||||||||| |||||||||||| ||    
T  8780 cacggacactgacacgccgacacagctaataatttga--aaaaatcatattatttagtgtaattacaa-----gtgtcggtgtcggacacgacacgtgtc 8872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 455
Target Start/End: Complemental strand, 4950 - 4891
Alignment:
Q  395 acacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  4950 acacaccgacacagctaataatttaaa-aaaaatcacataattcagtgtaattacaagtgt 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 472
Target Start/End: Complemental strand, 33430 - 33355
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagaca 472  Q
    ||||||||||||||||||||||||| |  |||||| |||||||||||| ||| ||||| ||||||||||||||| ||||    
T  33430 gacacgccgacacagctaataatttga--aaaaataacataattcagtgtaattacaa-tgtcgtgtcggtgtccgaca 33355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 539 - 468
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||| |||||||||| ||||||||||| |  |||||||||| |||||||| ||| |||||||||||    
T  539 cacggacactgatacgccgacactgctaataatttga--aaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 46664 - 46735
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| |||||||||||||||| ||||||||| |  ||||||||||||||||||| ||| ||||| |||||    
T  46664 cacggacaatgacacgccgacacagttaataatttga--aaaaatcacataattcagtgtaattacaaatgtcg 46735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 384 - 456
Target Start/End: Complemental strand, 178896 - 178825
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatca-cataattcagtataactacaagtgtc 456  Q
    |||||||||||||||||||||||| |||||||||| |  |||||||| ||||||||||| ||| ||||||||||    
T  178896 cacggacactgacacgccgacacaactaataatttga--aaaaatcatcataattcagtgtaattacaagtgtc 178825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 456
Target Start/End: Complemental strand, 192325 - 192256
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||||||||||||||| | ||||||||| |   ||||| ||||||||| || ||| ||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttga--gaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 478
Target Start/End: Original strand, 23406 - 23494
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc-gtgtcggtgtcagacacgacac 478  Q
    ||||||||||||||||||||| |||||| | ||  ||||||||||||||||||| ||| || ||||||| ||||| ||||| ||||||||||    
T  23406 gacactgacacgccgacacagataataactcaa--aaaaatcacataattcagtgtaattataagtgtcggtgtc-gtgtcggacacgacac 23494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 456
Target Start/End: Original strand, 23497 - 23563
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtc 456  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||||||||||||| ||| || |||||||    
T  23497 acactgacacaccgacacagttaataacttaaa-aaaaatcacataattcagtgtaattataagtgtc 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 528
Target Start/End: Complemental strand, 3922 - 3778
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactaca------agtgtcgtgtcggtgtcagacacgacacgta 481  Q
    |||||||| | |||||||| | ||||||||||||  |||||||||||||||||| ||| ||||      |||||||||| |||||| |||||||||| |     
T  3922 gacactgatatgccgacacggttaataatttaaa--aaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatg 3825  T
Q  482 tccgacaacaggacatgtataattcgaggagtgtcatttcttcatag 528  Q
    ||||||| |  |||| |  |||| ||||||||||| || ||||||||    
T  3824 tccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 488
Target Start/End: Original strand, 241576 - 241684
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgaca 477  Q
    |||||||||||||||||||||||||||||||||||    ||||||||||||||| ||| ||| ||  |      ||||||||| |||||| |||||||||    
T  241576 cacggacactgacacgccgacacagctaataattt--ggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgaca 241673  T
Q  478 cgtatccgaca 488  Q
    ||| |||||||    
T  241674 cgtgtccgaca 241684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 348083 - 348135
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataatt 437  Q
    |||||||||||||| || || ||||||| |||||||| |||||||||||||||    
T  348083 acggacactgacacaccaacccagctaaaaatttaaaaaaaaatcacataatt 348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 7108 - 7040
Alignment:
Q  385 acggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgt 455  Q
    ||||||||||| ||| |||||||||||||||||| |  |||||| |||||||| ||||||| |||||||||    
T  7108 acggacactgatacgtcgacacagctaataatttga--aaaaattacataatttagtataattacaagtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 386 - 457
Target Start/End: Original strand, 23753 - 23823
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    ||||||||||||| | | ||||| ||||||||| || ||||||||||||||||||| ||| |||||||||||    
T  23753 cggacactgacacactgtcacagttaataatttgaa-aaaaatcacataattcagtgtaattacaagtgtcg 23823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 130464 - 130535
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||| ||||| |||||||||| ||||| ||| ||  |||||||||||||||||| ||| |||||||||||    
T  130464 cacggacaatgacaagccgacacagttaatagtttgaa--aaaatcacataattcagtgtaattacaagtgtcg 130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 14522 - 14580
Alignment:
Q  394 gacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtg 454  Q
    |||||||||||||| |||||||||| ||  |||||||||||||||||| ||| ||||||||    
T  14522 gacacgccgacacaactaataatttgaa--aaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 45608 - 45536
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||||||||||||| |||||||  |||| || |||| |||||| |||||||||||| ||| |||||||||||    
T  45608 cacggacactgacacgtcgacacaattaattatctaaaaaaaaat-acataattcagtgtaattacaagtgtcg 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 515
Target Start/End: Original strand, 70264 - 70384
Alignment:
Q  388 gacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtcagacacgacacgtatccgac 487  Q
    ||||| |||| | |||||||| ||||||||| ||  ||||| |||||||||||| ||| || ||     ||||||||||| |||||||||||| ||||||    
T  70264 gacacagacatgtcgacacagttaataatttgaa--aaaataacataattcagtgtaattataa-----gtgtcggtgtcggacacgacacgtgtccgac 70356  T
Q  488 aacaggacatgtataattcgaggagtgt 515  Q
    | |||||||||  |||| ||| ||||||    
T  70357 accaggacatgcctaatccgatgagtgt 70384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 452 - 516
Target Start/End: Complemental strand, 9752 - 9688
Alignment:
Q  452 gtgtcgtgtcggtgtcagacacgacacgtatccgacaacaggacatgtataattcgaggagtgtc 516  Q
    ||||||||| ||||||||||||||||| | || |||| | ||||| ||||||| |||||||||||    
T  9752 gtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtc 9688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 467
Target Start/End: Complemental strand, 225345 - 225264
Alignment:
Q  384 cacggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcgtgtcggtgtc 467  Q
    ||||||||||||||||||||||||| ||||||||| |   ||||| ||||||| || | ||| || ||||||||||| ||||||    
T  225345 cacggacactgacacgccgacacagataataatttga--gaaaatgacataatacaatgtaattataagtgtcgtgttggtgtc 225264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 488
Target Start/End: Complemental strand, 8707 - 8604
Alignment:
Q  389 acactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaa------gtgtcgtgtcggtgtcagacacgacacgtat 482  Q
    ||||||||| ||||||||| |||||||||| ||  || |||||||||||| |||||| |||||      ||||||||||||| || ||||||| |||| |    
T  8707 acactgacatgccgacacaactaataatttgaa--aatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgt 8610  T
Q  483 ccgaca 488  Q
    ||||||    
T  8609 ccgaca 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 451 - 480
Target Start/End: Complemental strand, 263378 - 263349
Alignment:
Q  451 agtgtcgtgtcggtgtcagacacgacacgt 480  Q
    ||||||||||||||||||||||||||||||    
T  263378 agtgtcgtgtcggtgtcagacacgacacgt 263349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 386 - 457
Target Start/End: Complemental strand, 17824 - 17755
Alignment:
Q  386 cggacactgacacgccgacacagctaataatttaaataaaaatcacataattcagtataactacaagtgtcg 457  Q
    |||||| | |||||| |||||| |||||||||| ||  |||||||||||||| ||| ||| |||||||||||    
T  17824 cggacaataacacgctgacacaactaataatttgaa--aaaatcacataatttagtgtaattacaagtgtcg 17755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University