View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16767_low_15 (Length: 316)
Name: NF16767_low_15
Description: NF16767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16767_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 15 - 300
Target Start/End: Original strand, 51628010 - 51628295
Alignment:
| Q |
15 |
tcatcatgtttactcaatcatgcatgattctgaagtaatcggttcatgaccatgaattcttatatttgtttctgtggtgcagtcaaagatgaaaagaggg |
114 |
Q |
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| T |
51628010 |
tcatcatgtttactcaatcatgcatgattctgaagtaatcggttcatgaccatgaatccttatatttgtttctgtggtgcagtcaaagatgaaaagaggg |
51628109 |
T |
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| Q |
115 |
agtggaacgtcacctgcgcttacaaattcgcctgctacggtcccaactcttcatggtaattttccatcctcaataaaaaacaataataggtttggactat |
214 |
Q |
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|||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51628110 |
agtggaacgtcacctgcgcttacaaactcgcctgctatggccccaactcttcatggtaattttccatcctcaataaaaaacaataataggtttggactat |
51628209 |
T |
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| Q |
215 |
gcaagtctttataagaaagggcttaacaactacaattcttgtttgttgtaggtagcagtagaagtggaccaaatgacgttgattct |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51628210 |
gcaagtctttataagaaagggcttaacaactacaattcttgtttgttgtaggtagcagtagaagtggaccaaatgacgttgattct |
51628295 |
T |
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