View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16767_low_17 (Length: 256)
Name: NF16767_low_17
Description: NF16767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16767_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 3907232 - 3907465
Alignment:
| Q |
1 |
tagacccgcgtctagcgagcggataccctaatacctagcttctcaaattcatggaaaaatatgacattgcgcggttttgtaattgccgtagtttcctaat |
100 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
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| T |
3907232 |
tagacccgcgtctagcgagcggatgccctaatacctagcttctcaaattcatggaaaaatatgacattgcgcggttttgtaatcgccttagtttcctaat |
3907331 |
T |
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| Q |
101 |
gtgaatccaaacacacatttcaaatgagtgtgttgaggcttgtgttatctcttttcgtgggatcatttggtggtgttgttcgaggggatatatgtttggc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
3907332 |
gtgaatccaaacacacatttcaaatgagtgtgttgaggcttgtgttatctcttttcgtgggatcatttggttttgttgttcgaggggatatatgtttggc |
3907431 |
T |
|
| Q |
201 |
gtctttgttggtttttctggtggttatgtatgat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
3907432 |
gtctttgttggtttttctggtggttatgtatgat |
3907465 |
T |
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