View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16768_high_32 (Length: 331)
Name: NF16768_high_32
Description: NF16768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16768_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 2 - 313
Target Start/End: Complemental strand, 43778188 - 43777875
Alignment:
| Q |
2 |
tatggaaaagtcccttgtacnnnnnnntagtcctgtaagataaatgatgaacatgaagnnnnnnnnngggattgagaggacaaggcatgcgatcaaaaag |
101 |
Q |
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| T |
43778188 |
tatggaaaagtcccttgtacaaaaaaatagtcctgtgagataaatgatgaacatgaagaaaaaaaaagggattgagaggacaaggcatgcgatcaaaaag |
43778089 |
T |
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| Q |
102 |
agaaggaggaacacaagtttgagcaagatttttcgaatagtgtacatattcaaaccaagtatgatgtttgcttccacaattgcagctttaagaaacccaa |
201 |
Q |
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| T |
43778088 |
agaaggaggaacacaagtttgagcaagatttttcgaatagtgtacatattcaaaccaagtatgatgtttgcttccacaattgcagctttaagaaacccaa |
43777989 |
T |
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| Q |
202 |
aactcaaccttgttcattgagcaa--tgttgctcctggttataaaccttcaattggaaaaagaagggcatttcaatcatttacatgatttatctgatcca |
299 |
Q |
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| T |
43777988 |
atctcaaccttgttcattgagcaaggtgttgctcatggttataaaccttcaattggaaaaagaagggcatttcaatcatttacatgatttatctgatcca |
43777889 |
T |
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| Q |
300 |
tgaagtgccaaatt |
313 |
Q |
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|||||||||||||| |
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| T |
43777888 |
tgaagtgccaaatt |
43777875 |
T |
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