View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16768_high_36 (Length: 306)

Name: NF16768_high_36
Description: NF16768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16768_high_36
NF16768_high_36
[»] chr2 (42 HSPs)
chr2 (1-306)||(35329849-35330154)
chr2 (1-117)||(28803537-28803652)
chr2 (36-117)||(37053518-37053599)
chr2 (39-119)||(14209199-14209279)
chr2 (37-109)||(37474688-37474760)
chr2 (32-117)||(9478223-9478308)
chr2 (37-94)||(33192140-33192197)
chr2 (37-121)||(18962104-18962188)
chr2 (32-124)||(29430673-29430764)
chr2 (55-109)||(5045241-5045295)
chr2 (11-117)||(17952742-17952847)
chr2 (38-123)||(29429824-29429910)
chr2 (63-117)||(44606180-44606234)
chr2 (32-117)||(1493574-1493659)
chr2 (36-117)||(4550701-4550782)
chr2 (1-110)||(10143103-10143211)
chr2 (61-114)||(13864577-13864630)
chr2 (32-117)||(26964937-26965022)
chr2 (59-116)||(31461363-31461420)
chr2 (59-124)||(35459827-35459892)
chr2 (78-118)||(35713146-35713186)
chr2 (59-115)||(38239639-38239695)
chr2 (59-110)||(4090280-4090331)
chr2 (65-120)||(32837232-32837287)
chr2 (58-117)||(33197326-33197385)
chr2 (1-124)||(42817407-42817529)
chr2 (32-117)||(7103544-7103627)
chr2 (64-122)||(10190198-10190256)
chr2 (1-117)||(11513825-11513937)
chr2 (36-125)||(3673723-3673812)
chr2 (1-102)||(5133711-5133811)
chr2 (1-82)||(29316806-29316886)
chr2 (41-122)||(33267586-33267667)
chr2 (60-117)||(34339047-34339104)
chr2 (31-120)||(37845412-37845501)
chr2 (59-96)||(40758968-40759005)
chr2 (59-123)||(11393454-11393518)
chr2 (59-123)||(11410115-11410179)
chr2 (34-102)||(13866828-13866896)
chr2 (43-127)||(29729839-29729923)
chr2 (62-110)||(36114614-36114662)
chr2 (61-117)||(43431534-43431590)
[»] chr1 (41 HSPs)
chr1 (1-117)||(30259517-30259633)
chr1 (37-143)||(45999354-45999460)
chr1 (38-114)||(18434545-18434621)
chr1 (32-117)||(4276697-4276783)
chr1 (37-119)||(44032065-44032147)
chr1 (31-108)||(15360827-15360904)
chr1 (3-91)||(31517773-31517860)
chr1 (38-117)||(4200153-4200232)
chr1 (62-117)||(16982027-16982082)
chr1 (59-117)||(870969-871027)
chr1 (49-127)||(4202207-4202285)
chr1 (3-96)||(28689485-28689579)
chr1 (62-111)||(47002965-47003014)
chr1 (32-124)||(49516986-49517079)
chr1 (49-129)||(23373368-23373448)
chr1 (50-124)||(4338565-4338640)
chr1 (36-102)||(17423003-17423070)
chr1 (76-115)||(24857619-24857658)
chr1 (37-112)||(44928222-44928297)
chr1 (67-117)||(6659627-6659677)
chr1 (59-117)||(7200930-7200988)
chr1 (59-117)||(23895260-23895318)
chr1 (32-102)||(33527208-33527278)
chr1 (38-92)||(39777612-39777666)
chr1 (38-124)||(50998469-50998555)
chr1 (67-116)||(1662499-1662548)
chr1 (65-102)||(2773698-2773735)
chr1 (3-96)||(7218107-7218199)
chr1 (5-114)||(17269177-17269285)
chr1 (23-72)||(37272638-37272687)
chr1 (49-102)||(50319231-50319284)
chr1 (6-90)||(4622044-4622127)
chr1 (5-113)||(5421955-5422061)
chr1 (4-124)||(7273973-7274092)
chr1 (42-118)||(23370369-23370445)
chr1 (4-72)||(25006068-25006135)
chr1 (59-103)||(36151593-36151637)
chr1 (61-121)||(38651499-38651559)
chr1 (32-124)||(40304115-40304207)
chr1 (59-127)||(40357974-40358042)
chr1 (59-127)||(42550155-42550223)
[»] chr4 (46 HSPs)
chr4 (1-117)||(54325068-54325183)
chr4 (36-116)||(18630605-18630685)
chr4 (23-117)||(24929417-24929511)
chr4 (37-119)||(30024622-30024704)
chr4 (36-117)||(8469442-8469523)
chr4 (49-119)||(4191661-4191732)
chr4 (34-117)||(44319874-44319956)
chr4 (59-125)||(3662265-3662330)
chr4 (36-118)||(4071806-4071887)
chr4 (63-117)||(4471095-4471149)
chr4 (1-127)||(14011148-14011273)
chr4 (1-123)||(21157686-21157807)
chr4 (4-118)||(23819013-23819125)
chr4 (32-102)||(30338653-30338723)
chr4 (59-109)||(51044547-51044597)
chr4 (65-110)||(42641727-42641772)
chr4 (59-124)||(46796935-46797000)
chr4 (37-109)||(21593078-21593149)
chr4 (62-114)||(41088311-41088363)
chr4 (3-102)||(2996512-2996610)
chr4 (7-98)||(10192227-10192317)
chr4 (62-109)||(21683570-21683617)
chr4 (59-110)||(21952506-21952557)
chr4 (4-103)||(35958593-35958691)
chr4 (59-118)||(36734816-36734875)
chr4 (62-117)||(41050620-41050675)
chr4 (59-118)||(41606109-41606168)
chr4 (59-114)||(47970245-47970300)
chr4 (36-83)||(55870406-55870453)
chr4 (78-124)||(2980578-2980624)
chr4 (59-116)||(32920488-32920543)
chr4 (36-110)||(46013365-46013439)
chr4 (60-118)||(51555956-51556014)
chr4 (1-117)||(52735049-52735161)
chr4 (59-117)||(54277402-54277460)
chr4 (61-117)||(3891501-3891555)
chr4 (63-112)||(27405980-27406029)
chr4 (64-129)||(41603484-41603549)
chr4 (37-118)||(43372035-43372116)
chr4 (64-124)||(7749175-7749235)
chr4 (64-116)||(11264226-11264278)
chr4 (59-127)||(19422332-19422400)
chr4 (1-117)||(30207602-30207716)
chr4 (59-91)||(39438624-39438656)
chr4 (1-117)||(49219063-49219178)
chr4 (32-88)||(53626729-53626785)
[»] chr5 (38 HSPs)
chr5 (36-124)||(19177396-19177484)
chr5 (36-124)||(35135727-35135815)
chr5 (59-117)||(35960338-35960396)
chr5 (6-91)||(14295456-14295540)
chr5 (32-116)||(28586827-28586911)
chr5 (39-90)||(985584-985635)
chr5 (62-124)||(6733983-6734045)
chr5 (1-94)||(12975294-12975386)
chr5 (59-124)||(20982223-20982288)
chr5 (32-117)||(32059650-32059734)
chr5 (32-117)||(32172577-32172662)
chr5 (50-115)||(36646166-36646231)
chr5 (1-124)||(912679-912802)
chr5 (38-102)||(11667102-11667166)
chr5 (59-127)||(35095871-35095939)
chr5 (59-114)||(37063162-37063217)
chr5 (50-96)||(28578837-28578883)
chr5 (50-115)||(1019523-1019588)
chr5 (36-117)||(36539670-36539751)
chr5 (59-115)||(7096215-7096271)
chr5 (88-124)||(11790900-11790936)
chr5 (9-109)||(18857439-18857538)
chr5 (36-83)||(583838-583885)
chr5 (65-124)||(19113211-19113270)
chr5 (59-113)||(11095557-11095611)
chr5 (32-102)||(16889674-16889744)
chr5 (50-102)||(3970759-3970812)
chr5 (71-116)||(8985583-8985628)
chr5 (3-123)||(9202781-9202901)
chr5 (36-117)||(12407726-12407806)
chr5 (3-123)||(12425488-12425608)
chr5 (64-117)||(13224353-13224406)
chr5 (64-117)||(26516222-26516275)
chr5 (49-117)||(32194159-32194228)
chr5 (68-117)||(36638670-36638719)
chr5 (59-95)||(10303747-10303783)
chr5 (62-110)||(11835208-11835256)
chr5 (39-127)||(29116998-29117086)
[»] chr8 (27 HSPs)
chr8 (59-122)||(14482121-14482184)
chr8 (32-110)||(4763849-4763927)
chr8 (59-124)||(39392749-39392814)
chr8 (4-121)||(39551243-39551359)
chr8 (36-124)||(10727114-10727202)
chr8 (1-119)||(4558720-4558837)
chr8 (59-117)||(40728506-40728564)
chr8 (61-118)||(5226525-5226582)
chr8 (32-120)||(787167-787255)
chr8 (36-116)||(34770817-34770897)
chr8 (1-124)||(28769370-28769492)
chr8 (36-118)||(12972779-12972861)
chr8 (32-96)||(1470917-1470981)
chr8 (37-125)||(6918245-6918333)
chr8 (34-118)||(7026654-7026738)
chr8 (36-96)||(11000626-11000686)
chr8 (1-109)||(29973013-29973120)
chr8 (63-118)||(35298570-35298625)
chr8 (34-124)||(25872469-25872559)
chr8 (35-108)||(1112786-1112859)
chr8 (59-124)||(2364561-2364626)
chr8 (39-124)||(3645884-3645969)
chr8 (59-124)||(8062232-8062297)
chr8 (36-117)||(11056732-11056813)
chr8 (32-117)||(30988053-30988138)
chr8 (4-76)||(6509337-6509408)
chr8 (34-118)||(33209283-33209367)
[»] chr6 (33 HSPs)
chr6 (1-103)||(33787776-33787877)
chr6 (49-109)||(2456884-2456943)
chr6 (49-117)||(31672546-31672614)
chr6 (37-118)||(21959651-21959732)
chr6 (1-96)||(281879-281973)
chr6 (38-117)||(3169312-3169391)
chr6 (41-116)||(7713950-7714025)
chr6 (62-117)||(8349755-8349810)
chr6 (49-127)||(8010271-8010348)
chr6 (59-117)||(29269820-29269878)
chr6 (23-116)||(10452412-10452505)
chr6 (32-117)||(29274290-29274375)
chr6 (32-117)||(34671139-34671224)
chr6 (64-116)||(1810393-1810445)
chr6 (40-116)||(3204611-3204687)
chr6 (57-117)||(13360659-13360719)
chr6 (59-114)||(4248885-4248940)
chr6 (30-117)||(10032495-10032582)
chr6 (60-123)||(30523855-30523918)
chr6 (59-117)||(2514626-2514684)
chr6 (36-110)||(4006645-4006719)
chr6 (68-122)||(4247731-4247785)
chr6 (32-114)||(5550059-5550141)
chr6 (59-117)||(24774682-24774740)
chr6 (38-120)||(32386630-32386712)
chr6 (59-124)||(32513741-32513806)
chr6 (62-124)||(33911372-33911434)
chr6 (1-70)||(1401080-1401148)
chr6 (1-76)||(7785775-7785847)
chr6 (10-123)||(10016463-10016575)
chr6 (3-127)||(10400183-10400306)
chr6 (59-112)||(24836287-24836340)
chr6 (59-119)||(35095015-35095075)
[»] chr3 (32 HSPs)
chr3 (39-117)||(41028919-41028997)
chr3 (32-117)||(38462205-38462290)
chr3 (2-96)||(24887315-24887408)
chr3 (32-116)||(25183049-25183134)
chr3 (4-124)||(27792789-27792908)
chr3 (55-115)||(34958254-34958314)
chr3 (3-110)||(36139809-36139915)
chr3 (32-109)||(20192667-20192744)
chr3 (37-118)||(32703061-32703142)
chr3 (44-93)||(34954031-34954080)
chr3 (36-117)||(36101492-36101573)
chr3 (39-96)||(49586984-49587041)
chr3 (42-123)||(52450123-52450204)
chr3 (59-127)||(25185907-25185974)
chr3 (36-120)||(43116493-43116577)
chr3 (3-94)||(33405200-33405290)
chr3 (36-119)||(40122818-40122900)
chr3 (1-120)||(23785174-23785294)
chr3 (69-127)||(28283675-28283733)
chr3 (69-123)||(32663560-32663614)
chr3 (59-117)||(44374732-44374790)
chr3 (59-117)||(53457301-53457359)
chr3 (59-116)||(905058-905115)
chr3 (59-124)||(24268243-24268308)
chr3 (1-83)||(33965520-33965603)
chr3 (1-118)||(47584397-47584513)
chr3 (62-110)||(2128342-2128390)
chr3 (32-76)||(2201093-2201137)
chr3 (36-76)||(12923390-12923430)
chr3 (64-124)||(16790181-16790241)
chr3 (61-125)||(20349566-20349630)
chr3 (11-110)||(36783375-36783474)
[»] chr7 (39 HSPs)
chr7 (1-120)||(27481325-27481443)
chr7 (34-117)||(35536031-35536114)
chr7 (1-118)||(27548186-27548302)
chr7 (59-116)||(30496629-30496686)
chr7 (61-128)||(5373138-5373205)
chr7 (59-126)||(30751432-30751499)
chr7 (61-111)||(46223162-46223212)
chr7 (59-117)||(49060464-49060522)
chr7 (59-124)||(1431396-1431461)
chr7 (49-118)||(7244625-7244694)
chr7 (1-118)||(22759109-22759225)
chr7 (3-118)||(30456483-30456594)
chr7 (32-109)||(31002693-31002770)
chr7 (43-124)||(45593791-45593872)
chr7 (59-120)||(47004008-47004069)
chr7 (36-104)||(1417201-1417269)
chr7 (59-127)||(27626212-27626280)
chr7 (1-109)||(28165023-28165130)
chr7 (37-117)||(39551614-39551694)
chr7 (3-102)||(12110299-12110397)
chr7 (41-120)||(33894544-33894622)
chr7 (59-117)||(2223072-2223130)
chr7 (59-117)||(11721314-11721372)
chr7 (62-112)||(15328535-15328585)
chr7 (59-117)||(25511551-25511609)
chr7 (58-124)||(36598408-36598474)
chr7 (32-105)||(5272881-5272954)
chr7 (58-127)||(29574688-29574757)
chr7 (33-110)||(30133980-30134057)
chr7 (59-108)||(35808992-35809041)
chr7 (64-117)||(47006972-47007025)
chr7 (3-111)||(1350275-1350382)
chr7 (24-76)||(2048094-2048146)
chr7 (37-101)||(5006575-5006639)
chr7 (59-115)||(24973870-24973926)
chr7 (80-124)||(27389300-27389344)
chr7 (1-81)||(29363478-29363557)
chr7 (59-127)||(42281587-42281655)
chr7 (64-132)||(46091505-46091573)
[»] scaffold0590 (1 HSPs)
scaffold0590 (59-116)||(1162-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (59-116)||(2756-2813)
[»] scaffold0091 (1 HSPs)
scaffold0091 (61-118)||(5942-5999)
[»] scaffold0024 (1 HSPs)
scaffold0024 (13-117)||(27500-27603)
[»] scaffold0654 (1 HSPs)
scaffold0654 (59-117)||(6725-6783)
[»] scaffold0022 (1 HSPs)
scaffold0022 (51-117)||(143141-143207)
[»] scaffold0014 (1 HSPs)
scaffold0014 (59-117)||(116644-116702)
[»] scaffold0110 (1 HSPs)
scaffold0110 (32-124)||(4284-4377)


Alignment Details
Target: chr2 (Bit Score: 306; Significance: 1e-172; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 35329849 - 35330154
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35329849 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 35329948  T
Q  101 aaacacttatatgataaacacttaatttaattaaattgtttatccaagcagggccataataactttcaccgattaataaagagtcaagatgggtgaaaag 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35329949 aaacacttatatgataaacacttaatttaattaaattgtttatccaagcagggccataataactttcaccgattaataaagagtcaagatgggtgaaaag 35330048  T
Q  201 aattaacatacccaagtaacgagtacaccttcgccaggaggtctcttcatatcaaccggcactcgaccagtgagaagctccaaaagtacaacaccataac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35330049 aattaacatacccaagtaacgagtacaccttcgccaggaggtctcttcatatcaaccggcactcgaccagtgagaagctccaaaagtacaacaccataac 35330148  T
Q  301 tataca 306  Q
    ||||||    
T  35330149 tataca 35330154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 28803537 - 28803652
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||| ||||| |||| | | ||| ||| |||||||| ||||| ||| |||||||||||||||||| |||||| ||||||  ||||  ||    
T  28803537 tccataagctctccaggatag-tttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatat 28803635  T
Q  101 aaacacttatatgataa 117  Q
    || ||||||||||||||    
T  28803636 aagcacttatatgataa 28803652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 37053599 - 37053518
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||| ||||| ||||| ||| ||||||||||||||| || |||||| |||||||| ||| ||||| ||||||||||||||    
T  37053599 cttataacttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataa 37053518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 14209279 - 14209199
Alignment:
Q  39 atagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaac 119  Q
    ||||||||| ||||| ||| |||| ||||||||||||| |||||| ||||||| |||  || |||||||||||||||||||    
T  14209279 atagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataaac 14209199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 37474760 - 37474688
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    |||||| |||| ||||| ||| | ||||||||||||| || |||||| |||||||||||||||||||||||||    
T  37474760 ttatagtttatatgaaaacagatcgactttattttattttttgttatcgaaatagtttatgcataaacactta 37474688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 9478308 - 9478223
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||| |||||||||| |||||  |  |||| ||||||||||||  |||||| ||||||| |||| ||||||||||||||||||||    
T  9478308 acagcatatagcttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttatatgataa 9478223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 33192197 - 33192140
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagttt 94  Q
    ||||| ||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  33192197 ttataacttatatgaaaacagtttgactttattttatcttatgttatagaaatagttt 33192140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 18962104 - 18962188
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacac 121  Q
    ||||||||||| ||||| ||| || ||||||||||||||| ||||||  |||||| | || ||||| |||||| |||||||||||    
T  18962104 ttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatgataaacac 18962188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 29430764 - 29430673
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||||||||||  |||| ||| ||||||||| |||| ||| |||||| ||||||| |||| ||||||| ||| |||||||||| ||||    
T  29430764 acagcttatagcttataagaaaacagtttgacttta-tttaacttttgttatagaaatagcttatacataaacccttgtatgataaacgctta 29430673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 5045241 - 5045295
Alignment:
Q  55 cagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    |||||||||||||||||||||| ||||||  |||||| |||| ||||||||||||    
T  5045241 cagcttgactttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 17952742 - 17952847
Alignment:
Q  11 ctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    ||||| |||||||| ||| | ||| ||| |||||||| |||||  || |||||||||||||||||| |||||| ||||||| ||||  |||| | |||||    
T  17952742 ctccaggatagctt-atgaaaacatcttgtagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttat 17952840  T
Q  111 atgataa 117  Q
    |||||||    
T  17952841 atgataa 17952847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 29429824 - 29429910
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaa-tagtttatgcataaacacttatatgataaacactt 123  Q
    |||||||||||||||| ||| |||||||||||||||||| ||| ||  ||| |||||||| | ||| | ||||||||||||| ||||    
T  29429824 tatagcttatgtgaaaacagtttgactttattttatcttttgtcattaaaagtagtttatacgtaagctcttatatgataaaaactt 29429910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Original strand, 44606180 - 44606234
Alignment:
Q  63 ctttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||| ||||||| |||||| |||| ||||||||||||||| ||||    
T  44606180 ctttattttatcttttgttatgaaaatagcttatacataaacacttatataataa 44606234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 1493574 - 1493659
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||| |||||||||| ||||| || || |||||||||||||||  |||||| |||| |||||||  |||| || |||||||||||    
T  1493574 acagcatatagcttatatgaaaacaactagactttattttatctattgttatagaaagagtttataaataagcaattatatgataa 1493659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 4550782 - 4550701
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| |||| ||||| ||||||||| |||||||||||| | ||||||||| |  |||| ||||| ||||||| ||||||    
T  4550782 cttatagtttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataa 4550701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10143211 - 10143103
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||| ||||||| |||||||| ||| | | | |||||||||||| | ||| ||| ||||||| |||||||||| |||||| ||||||  |||| |||    
T  10143211 tccataaactctccatgatagctt-atgaaaaaaacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacat 10143113  T
Q  101 aaacacttat 110  Q
    || |||||||    
T  10143112 aagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 13864630 - 13864577
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    |||||||||||| ||| |||||| ||||||| |||| |||||||||||||||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 26964937 - 26965022
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||| |||||  || | |||||||||| |||| ||||| |||||| ||||||| |||| | |||||||||||| |||||    
T  26964937 acagcttatagattatgcaaacgaagcttgacttaatttaatcttgtgttatagaaatagcttattcgtaaacacttatacgataa 26965022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 31461420 - 31461363
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||||||||||||| |||||| ||||||| ||||  |||| |||||||||||||    
T  31461420 ttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgata 31461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 35459892 - 35459827
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||||||||| || |||  |||||| |||| || || |||||||||||||||||||||    
T  35459892 ttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataaacactta 35459827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 35713186 - 35713146
Alignment:
Q  78 tgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  35713186 tgttacggaaatagtttatacataaacacttatatgataaa 35713146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 38239639 - 38239695
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    ||||||| |||||||||| |||||| ||||||| |||| |||||||||||| |||||    
T  38239639 ttgacttgattttatcttttgttatagaaatagcttatacataaacacttacatgat 38239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 4090331 - 4090280
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    |||||||||||||||||| |||||||||||||| |||| |||| || |||||    
T  4090331 ttgactttattttatcttgtgttatggaaatagcttattcatacacccttat 4090280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 32837287 - 32837232
Alignment:
Q  65 ttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    |||||||||||| |||||| ||||||| ||||||||||   |||||||||||||||    
T  32837287 ttattttatcttttgttatagaaatagattatgcataagtgcttatatgataaaca 32837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 33197326 - 33197385
Alignment:
Q  58 cttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||| |||||| |||||| ||||||| ||||  |||| ||||||||||||||    
T  33197326 cttgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataa 33197385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 42817407 - 42817529
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||||| ||  ||||||| ||| | |||| ||||  ||||| ||||| ||||||||||| |||||||||| || ||| ||||||   |||  ||    
T  42817407 tccataagctcttcagaatagctt-atgaaaacagtttattacttatatgaaaacagcttgacttcattttatcttttggtatagaaataacatataaat 42817505  T
Q  101 aaacacttatatgataaacactta 124  Q
     |||||||||||||||||| ||||    
T  42817506 caacacttatatgataaacgctta 42817529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 7103544 - 7103627
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||| | ||| ||| |||||||||||||||||  ||||||  | ||||||| | ||||| ||| ||||||||||    
T  7103544 acagcttatagcttatattaaaacagtttgactttattttatct--tgttataaatatagtttctacataagcacatatatgataa 7103627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 10190256 - 10190198
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacact 122  Q
    ||||||||||| | ||||||  ||||||||||| ||||| |||||||||||||| ||||    
T  10190256 tttattttatcctttgttataaaaatagtttatacataagcacttatatgataaccact 10190198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 11513937 - 11513825
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||| ||| |||||| |||||||| ||| | ||| |||||||||||| ||||| ||  |||||||||||||||||| ||||   | ||||  |||| |||    
T  11513937 tccaaaagttctccatgatagctt-atgaaaacaacttatagcttatatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacat 11513842  T
Q  101 aaacacttatatgataa 117  Q
    |||| ||||||||||||    
T  11513841 aaacccttatatgataa 11513825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 3673812 - 3673723
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaa 125  Q
    |||||| ||||| ||||| ||  || |||||||||||| || |||||| ||||||  | || ||||| ||||||||||| ||||||||||    
T  3673812 cttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatgacaaacacttaa 3673723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5133811 - 5133711
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||||||  ||||| |||| || | |||||||||| ||||| | ||| ||| ||  |||||||||||||| |||||| ||||||| |||| |||    
T  5133811 tccataagctctcttagataacttt-tgaaaacagcttatatcttatataaaaacagtttatctttattttatcttttgttatagaaatagcttatacat 5133713  T
Q  101 aa 102  Q
    ||    
T  5133712 aa 5133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29316806 - 29316886
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgtta 82  Q
    |||||||| ||||||||||||||  ||| | ||||||||||| |||||||||| ||  || || |||||||||||| |||||    
T  29316806 tccataagttctccaagatagctg-atgaaaacagcttatagattatgtgaaaacaatttaaccttattttatcttctgtta 29316886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 33267586 - 33267667
Alignment:
Q  41 agcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacact 122  Q
    ||||||| ||||| ||| || |||||||||||   | |||||| ||||||| |||| ||||| |||||||||||||| ||||    
T  33267586 agcttatatgaaaacagtttaactttattttactgtttgttatagaaatagattatacataagcacttatatgataaccact 33267667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 34339104 - 34339047
Alignment:
Q  60 tgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||  | ||| |||| ||||||| ||||| ||||||||||||||    
T  34339104 tgactttattttatctttagctatagaaaaagtttatacataagcacttatatgataa 34339047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 37845412 - 37845501
Alignment:
Q  31 gacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    |||||||||||||||| ||||||  |||| ||||||||||||| || | ||||  ||||||  |||  ||||  ||||||||||||||||    
T  37845412 gacagcttatagcttacgtgaaacaagctcgactttattttatattttattataaaaatagcatataaataagaacttatatgataaaca 37845501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Complemental strand, 40759005 - 40758968
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttat 96  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  40759005 ttgactttattttatcttttgttatggaaatagcttat 40758968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 11393454 - 11393518
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactt 123  Q
    |||| |||||| |||||| || ||| ||||||| ||||  |||| ||||||||||||||||||||    
T  11393454 ttgaatttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacactt 11393518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 11410115 - 11410179
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactt 123  Q
    |||| |||||| |||||| || ||| ||||||| ||||  |||| ||||||||||||||||||||    
T  11410115 ttgaatttattatatcttttgatatagaaatagcttatagataagcacttatatgataaacactt 11410179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 13866896 - 13866828
Alignment:
Q  34 agcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    ||||||||| |||| | ||| ||| ||||||| |||||||||| || ||| |||||||||||| |||||    
T  13866896 agcttatagattatataaaaacagtttgacttaattttatcttttgctatagaaatagtttatacataa 13866828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 29729923 - 29729839
Alignment:
Q  43 cttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    ||||||||||| ||| || |||||| |||||||| ||||||  ||||||  ||| | ||| |||||||| ||||| |||||||||    
T  29729923 cttatgtgaaaacagtttcactttaatttatcttttgttataaaaatagcatatacgtaagcacttatacgataatcacttaatt 29729839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 36114614 - 36114662
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    ||||||||||||||| |||||| ||| ||| |||||||||| |||||||    
T  36114614 actttattttatcttttgttatagaactaggttatgcataagcacttat 36114662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 43431534 - 43431590
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| |||||||| |||||| ||||||  |||| ||| ||||||||||||||||    
T  43431534 gactttactttatcttttgttattgaaataacttatacattaacacttatatgataa 43431590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30259517 - 30259633
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||| | ||||||| ||||||||||||||| || |||||| ||||||| || |||||    
T  30259517 tccataagctctccatgatagctttatgcaaacagcttatagcttatatcaaagcagtttgactttattttatattttgttatagaaatagcttgtgcat 30259616  T
Q  101 aaacacttatatgataa 117  Q
    || ||||| ||||||||    
T  30259617 aagcacttctatgataa 30259633  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 45999354 - 45999460
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatttaattaaat 136  Q
    ||||||||||| ||||||||| |||||||||| ||||||| |||||| ||||||| |||| ||| | |||||||   ||||  | ||||||||||||| |    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcacttatgctataagaatttaatttaattaagt 45999453  T
Q  137 tgtttat 143  Q
    |||||||    
T  45999454 tgtttat 45999460  T

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Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 18434545 - 18434621
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    |||||||||| ||| ||||| |||||||||||||||||| |||||||||||||| | || || || |||||||||||    
T  18434545 tatagcttatatgagagcagtttgactttattttatcttttgttatggaaataggtaatacagaagcacttatatga 18434621  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 4276697 - 4276783
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat-aaacacttatatgataa 117  Q
    |||| ||||||||||||||||| |||  ||||||||| ||||||| |||||| |||||||||||| | | ||||| |||||||||||    
T  4276697 acaggttatagcttatgtgaaaacagtatgactttatattatcttttgttatagaaatagtttatacttaaaacatttatatgataa 4276783  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 44032065 - 44032147
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaac 119  Q
    ||||||||||| ||||| ||  |||||||||||||| ||| |||||| ||||  | |||| ||||||||||||||||||||||    
T  44032065 ttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataaac 44032147  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 15360904 - 15360827
Alignment:
Q  31 gacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactt 108  Q
    |||| |||||||||||| ||||| ||| |||||||||||||||||| |||||| ||||||  | || |||||||||||    
T  15360904 gacaacttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 31517773 - 31517860
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatag 91  Q
    |||||||||||||||| || || ||| |||||||||||||||||| ||||| ||  || ||||||||||||||| |||| | |||||||    
T  31517773 cataagctctccaagacagatt-atgaagacagcttatagcttatatgaaatcaatttaactttattttatcttttgttgtagaaatag 31517860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 4200232 - 4200153
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||||  |||||  ||||  ||||||||||| |||||||    
T  4200232 tatagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataa 4200153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 16982027 - 16982082
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||||| |||||| ||||||  |||| ||||||||||||||||||||    
T  16982027 actttattttatcttttgttatcgaaataagttatacataaacacttatatgataa 16982082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 871027 - 870969
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| |||||||||| ||||||  ||||||||||| ||||| ||||||||||||||    
T  871027 ttgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataa 870969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 4202207 - 4202285
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    ||||| ||||||||||||  |||||||| |||||| ||||||  |||| | ||| |||||||||||||||| |||||||    
T  4202207 tgaaaacagcttgactttggtttatcttttgttatagaaataacttatacttaagcacttatatgataaacgcttaatt 4202285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 28689485 - 28689579
Alignment:
Q  3 cataagctctccaagatagctt-tatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    |||||||| ||||||||||||| |||| | ||| |||||||||||| ||||| |  ||||  ||||||||||||| || ||| ||||||||||||    
T  28689485 cataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaaccacttgcatttattttatcttttgatatagaaatagtttat 28689579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 47002965 - 47003014
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttata 111  Q
    ||||||||||||||| | |||| |||||| ||||||||||||||||||||    
T  47002965 actttattttatcttttattatcgaaataatttatgcataaacacttata 47003014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 49517079 - 49516986
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaac-acttatatgataaacactta 124  Q
    |||||||||||||||  ||||| ||  |||||||||||||||||| |||||| ||||||  |||| || |||| | ||||||||||||| ||||    
T  49517079 acagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaaacaatttatatgataaacgctta 49516986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 23373368 - 23373448
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaattta 129  Q
    ||||| ||| |||||||||||||||||| || ||| ||||||| | || | ||| || ||||||||||| |||||||||||    
T  23373368 tgaaaacagattgactttattttatcttttgatatagaaatagctaatacgtaagcagttatatgataagcacttaattta 23373448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 4338640 - 4338565
Alignment:
Q  50 gaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaa-cacttatatgataaacactta 124  Q
    |||| ||| |||||||||||||||||| |||| | || |||  |||| |||||| |||||||||||||||||||||    
T  4338640 gaaaacagtttgactttattttatcttctgttctagacataacttatacataaagcacttatatgataaacactta 4338565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 17423003 - 17423070
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatc-ttatgttatggaaatagtttatgcataa 102  Q
    |||||||||||| ||||| |||||||||||||||||||| || |||||| |||| || |||| |||||    
T  17423003 cttatagcttatatgaaatcagcttgactttattttatcgttttgttatagaaaaagcttatacataa 17423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 24857619 - 24857658
Alignment:
Q  76 tatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  24857619 tatgttatagaaatagtttatacataaacacttatatgat 24857658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 44928222 - 44928297
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatat 112  Q
    ||||||||||| ||||| |||||||||||||| ||||||| ||  |  ||||||| |||| ||||| |||||||||    
T  44928222 ttatagcttatatgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcacttatat 44928297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 6659677 - 6659627
Alignment:
Q  67 attttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||| || ||| |||||||||||| ||||| ||||||||||||||    
T  6659677 attttatcttttgctatagaaatagtttatacataagcacttatatgataa 6659627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 7200930 - 7200988
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| | |||||||||||| ||||   |||||||||| |||||||    
T  7200930 ttgactttattttatcttttattatggaaatagcttataagtaaacacttacatgataa 7200988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 23895318 - 23895260
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||| ||||||||||||| |||||| ||||||| |||| |||||  |||||||||||||    
T  23895318 ttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataa 23895260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 33527208 - 33527278
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    ||||||||||| |||| ||||| ||| |||||| ||||||||||| |||| | ||||||| |||| |||||    
T  33527208 acagcttatagattatatgaaaacagtttgactgtattttatcttttgttttagaaatagcttattcataa 33527278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 39777666 - 39777612
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagt 92  Q
    |||||||| | ||||||||| ||||||||||| |||||| |||||| ||||||||    
T  39777666 tatagcttgtatgaaagcagtttgactttattctatcttttgttatagaaatagt 39777612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 50998555 - 50998469
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||| |||||| || |||| ||| ||||||||| |||||  ||||||| |||| ||||| | | |||||||||||| ||||    
T  50998555 tatagcttatatgaaagtagtttgattttgttttatcttttgttacagaaatagcttatacataagcgcctatatgataaacgctta 50998469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 1662548 - 1662499
Alignment:
Q  67 attttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||||||  ||||| ||| |||||||| |||||||||||||||||||    
T  1662548 attttatctttcgttatagaagtagtttatacataaacacttatatgata 1662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 2773698 - 2773735
Alignment:
Q  65 ttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  2773698 ttattttatcttctgttatggaaatagcttatgcataa 2773735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 7218107 - 7218199
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    |||||| |||||| ||||| || ||| | ||| |||||||||||| ||||| ||  |||||||||||||| ||| | |||||||||||| ||||    
T  7218107 cataagttctccaggataggtt-atgaaaacaacttatagcttatatgaaaacaatttgactttattttaccttttattatggaaatagattat 7218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 17269285 - 17269177
Alignment:
Q  5 taagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaac 104  Q
    ||||||||||| |||||||| ||| | ||| ||||| |||||| ||||| ||  |||||||||||||  ||| |||| | ||||||  |||| ||||| |    
T  17269285 taagctctccaggatagctt-atgaaaacaacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagc 17269187  T
Q  105 acttatatga 114  Q
    ||||||||||    
T  17269186 acttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 37272638 - 37272687
Alignment:
Q  23 tttatgtagacagcttatagcttatgtgaaagcagcttgactttatttta 72  Q
    |||||| | |||||||||||||||| ||||| ||| ||||||||||||||    
T  37272638 tttatgaaaacagcttatagcttatatgaaaacagattgactttatttta 37272687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 50319284 - 50319231
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    ||||| || ||||||||||||||||||| |||||| ||||||| |||| |||||    
T  50319284 tgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 4622127 - 4622044
Alignment:
Q  6 aagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaata 90  Q
    ||||||||||||||||| | ||| | |||||||||||||||| |||||  || |||| || |||| ||||| |||||| ||||||    
T  4622127 aagctctccaagatagcat-atggaaacagcttatagcttatatgaaaagagtttgaattcatttgatcttttgttatagaaata 4622044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 5421955 - 5422061
Alignment:
Q  5 taagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaac 104  Q
    ||||||||| |||||||||| ||  | ||| ||||||||||||  |||| ||  |||||| ||||||||||| ||| |||||||||| ||||  |||| |    
T  5421955 taagctctctaagatagctt-atcaaaacaacttatagcttataagaaaacaatttgactatattttatcttttgtcatggaaatagcttat-aataagc 5422052  T
Q  105 acttatatg 113  Q
    |||||||||    
T  5422053 acttatatg 5422061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 7273973 - 7274092
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaa 103  Q
    ||||||||| |||| ||| |||||| | |||||||||| ||| | ||||| ||  |||||||||||| ||||| ||||||  |||||   ||| |||||     
T  7273973 ataagctcttcaaggtag-tttatggaaacagcttataacttgtatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataag 7274071  T
Q  104 cacttatatgataaacactta 124  Q
    || ||||||||||| ||||||    
T  7274072 catttatatgataagcactta 7274092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 23370369 - 23370445
Alignment:
Q  42 gcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||| ||||| |||||| ||||| ||||||||| ||| || ||||||| |||| | |||  ||||||||||||||    
T  23370369 gcttatatgaaaccagcttcactttgttttatcttttgtaatagaaatagcttatacgtaagtacttatatgataaa 23370445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 25006068 - 25006135
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttatttta 72  Q
    ||||| ||||||||||||||| ||| | ||| |||||||||||| ||||| ||  ||||||||||||||    
T  25006068 ataagatctccaagatagctt-atgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 36151593 - 36151637
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaa 103  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||||    
T  36151593 ttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 38651499 - 38651559
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacac 121  Q
    ||||||| |||||||| |||||| ||| ||| |||| ||||| |||||| |||||||||||    
T  38651499 gactttagtttatcttttgttatagaattagcttatacataagcacttacatgataaacac 38651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 40304115 - 40304207
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||| ||||| ||||| ||   ||| ||||||||||||| ||||||  |||||| |||| | ||| || | ||||||||||||||||    
T  40304115 acagcttataacttatatgaaaacaatgtgattttattttatcttttgttatataaatagcttatacctaagcaataatatgataaacactta 40304207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 40357974 - 40358042
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    ||||||||||||||||   |||||| ||||||| |||| ||||  ||||||||| |||| |||||||||    
T  40357974 ttgactttattttatccattgttatagaaatagcttatacatagtcacttatataataagcacttaatt 40358042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 42550223 - 42550155
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||||||||||||||| | |  | ||| ||| |||| ||||| ||||| ||||||||||||||||||    
T  42550223 ttgactttattttatcttttatcgtagaactagcttatacataagcacttgtatgataaacacttaatt 42550155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 54325068 - 54325183
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||| ||||||| ||||||||| || | | |||||||||||||| ||||| ||| |||||||||||||||||| ||| || |||||||||||| ||     
T  54325068 tccataaactctccatgatagcttt-tgaaaatagcttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacac 54325166  T
Q  101 aaacacttatatgataa 117  Q
    || ||||||||||||||    
T  54325167 aagcacttatatgataa 54325183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 18630685 - 18630605
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||||||| ||||| |   |||||||||||||||||| |||||| |||||||||||||||||| | |||||||||||    
T  18630685 cttatagcttatatgaaaaccaattgactttattttatcttttgttattgaaatagtttatgcataagcgcttatatgata 18630605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 117
Target Start/End: Complemental strand, 24929511 - 24929417
Alignment:
Q  23 tttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||| | ||| |||||||||| | ||||| ||| | |||||||||||||||| |||||| ||||||||| || || ||||| |||||||||||    
T  24929511 tttatgaaaacaacttatagcttttatgaaaacagttagactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataa 24929417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 30024704 - 30024622
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaac 119  Q
    ||||||||||| ||||| ||  || ||||||||||||||| |||||| ||||||  ||||||||||  |||||||||||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataaac 30024622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 8469442 - 8469523
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||| ||| ||| ||||||||  ||||| |||||||||||| |||||| || ||||||| ||||||| ||||||||||||||    
T  8469442 cttacagcctatatgaaagcactttgacattattttatcttctgttattgatatagtttctgcataagcacttatatgataa 8469523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 4191732 - 4191661
Alignment:
Q  49 tgaaagcagcttgactttatttt-atcttatgttatggaaatagtttatgcataaacacttatatgataaac 119  Q
    ||||| ||| ||||||||||||| ||||| |||||| ||||||| |||| ||||| ||||||||||||||||    
T  4191732 tgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataaac 4191661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 44319956 - 44319874
Alignment:
Q  34 agcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||| |||||||| ||||| ||| | |||||||||||||||| | |||| |||||||||||| ||| | ||||||||||||||    
T  44319956 agcttgtagcttatatgaaaacagttcgactttattttatctt-ttttatagaaatagtttatacatgagcacttatatgataa 44319874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 3662330 - 3662265
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaa 125  Q
    |||||||||||||||||| |||||| | |||||||||| ||||| |||| | |||||||||||||||    
T  3662330 ttgactttattttatcttttgttataggaatagtttat-cataagcactaacatgataaacacttaa 3662265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 4071887 - 4071806
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||||||||| |||||  |  |||||||||||||||||| |||||| ||||||| ||||  ||||||||||||||| ||||    
T  4071887 cttatagcttatatgaaaataatttgactttattttatcttttgttatagaaatag-ttatatataaacacttatatggtaaa 4071806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 4471149 - 4471095
Alignment:
Q  63 ctttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||| ||||||  ||||||||||||||||| ||||||||| ||||    
T  4471149 ctttattttatcttttgttataaaaatagtttatgcataagcacttatataataa 4471095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14011273 - 14011148
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||||||||||||||||| ||||| |||  || |||||||| |  || ||  ||  |||||||||||||| ||||||  || ||| |||| ||     
T  14011273 tccataagctctccaagatagctt-atgtaaacattttgtagcttatatataaccaatttacctttattttatcttttgttataaaactagcttatacac 14011175  T
Q  101 aaacacttatatgataaacacttaatt 127  Q
    || || |||||||||||||||||||||    
T  14011174 aatcatttatatgataaacacttaatt 14011148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 21157807 - 21157686
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||||| || |||||| | ||| | ||| |||||||||||  ||||| ||| ||||||||| |||||  | ||||||  |||||| | || |||    
T  21157807 tccataagctcttcaggatagcat-atgaaaacatcttatagcttacatgaaaacagtttgactttagtttatactttgttatcaaaatagctgatacat 21157709  T
Q  101 aaacacttatatgataaacactt 123  Q
    || ||||||||||||||||||||    
T  21157708 aagcacttatatgataaacactt 21157686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 23819125 - 23819013
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaa 103  Q
    ||||||||| ||||||||||| ||| | |||  ||||| ||||| ||||| ||| ||||||  ||||||| || |||||||||||||  |||| ||||||    
T  23819125 ataagctcttcaagatagctt-atgaaaacatgttataacttatatgaaaacagtttgactacattttatatt-tgttatggaaataacttatacataaa 23819028  T
Q  104 cacttatatgataaa 118  Q
    ||||| |||||||||    
T  23819027 cacttgtatgataaa 23819013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 30338653 - 30338723
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||| ||||||||||| ||||| ||| || |||||||| |||||| |||||| |||||||||||| |||||    
T  30338653 acagtttatagcttatatgaaaacagtttaactttattctatcttttgttatagaaatagtttatacataa 30338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 51044547 - 51044597
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||||||||||    
T  51044547 ttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 42641727 - 42641772
Alignment:
Q  65 ttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||    
T  42641727 ttattttatcttttgttatggaaatagcttatacataaacacttat 42641772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 46797000 - 46796935
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||| ||||||||||| | ||||||| |||||| ||||||||||  ||||||||||||| ||||||    
T  46797000 ttgaatttattttatcgtttgttatgaaaatagcttatgcataagaacttatatgataagcactta 46796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 21593078 - 21593149
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    ||||||||||| |||||  || ||||||||||||||||||  ||||| |||||||||||| ||||| ||||||    
T  21593078 ttatagcttatatgaaaatag-ttgactttattttatctttagttatagaaatagtttatacataagcactta 21593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 41088363 - 41088311
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    ||||||||||||||| |||| || ||||||||||| ||||| |||||||||||    
T  41088363 actttattttatcttttgttgtgaaaatagtttatacataagcacttatatga 41088311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 2996610 - 2996512
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||| ||||||||||||||||| ||| | ||| |||||| ||||| | ||| ||  |||||| |||||||||||||||||| ||| ||| |||| |||||    
T  2996610 catacgctctccaagatagctt-atgaaaacaacttataacttatataaaaacaatttgactgtattttatcttatgttatcgaagtagcttattcataa 2996512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 10192317 - 10192227
Alignment:
Q  7 agctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgc 98  Q
    ||||||||| ||||||||| || | ||| |||||| ||||| ||||| ||  ||||||||||| |||||| ||||||  |||||||||||||    
T  10192317 agctctccaggatagcttt-tgaaaacaacttataacttatatgaaaacaatttgactttattctatcttttgttataaaaatagtttatgc 10192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 21683570 - 21683617
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    ||||||| ||||||| |||||| |||||||||||| ||||||||||||    
T  21683570 actttatcttatcttttgttatagaaatagtttatacataaacactta 21683617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 21952557 - 21952506
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    ||||||| |||||| ||| |||||| ||||||| ||||||||||||||||||    
T  21952557 ttgacttgattttaccttttgttatagaaatagcttatgcataaacacttat 21952506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 35958691 - 35958593
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaa 103  Q
    |||| ||||||| |||||||| ||| | ||||||| |||||||| | |||  |  |||||||||||||| |||||||||| ||||||| |||| ||||||    
T  35958691 ataaactctccaggatagctt-atgaaaacagcttctagcttatataaaacaaatttgactttattttaacttatgttatagaaatagcttatacataaa 35958593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 36734875 - 36734816
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||||||||||| ||| |||||| |||| || |||| ||||| |||||||||||||||    
T  36734875 ttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataaa 36734816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 41050675 - 41050620
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||| |||| ||||| |||||| |||||||||||| ||| ||||||||||||||||    
T  41050675 acttcatttcatcttttgttatagaaatagtttatacattaacacttatatgataa 41050620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 41606168 - 41606109
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||||||||||||| | ||||||  ||||||||| | ||||||||||| |||||||||    
T  41606168 ttgactttattttatcctttgttatcaaaatagtttttacataaacacttgtatgataaa 41606109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 47970300 - 47970245
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    ||||||| |||||||||| |||||| ||||||| |||| ||||| |||||||||||    
T  47970300 ttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 55870406 - 55870453
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttat 83  Q
    |||||||||||||||||| ||| |||||||||||| ||||| ||||||    
T  55870406 cttatagcttatgtgaaaacagtttgactttatttgatcttttgttat 55870453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 2980578 - 2980624
Alignment:
Q  78 tgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||| ||||||| |||| ||||| |||||||||||||||||||||    
T  2980578 tgttatagaaatagcttatacataagcacttatatgataaacactta 2980624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 32920488 - 32920543
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||||||||||||||  |||||  |||||| |||| |||||||||||||||||||    
T  32920488 ttgactttattttatctt--gttataaaaatagcttatccataaacacttatatgata 32920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 46013365 - 46013439
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    |||||| ||||| | ||| ||| |||||||||||||||||| ||||   |||||||||||  |||||||||||||    
T  46013365 cttataacttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaacacttat 46013439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 51555956 - 51556014
Alignment:
Q  60 tgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||||||||||||||| ||||||   ||||| |||| ||||| |||||||||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataaa 51556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 52735161 - 52735049
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||||| ||||||||||| | | | ||| | |||| ||||| |||||| |  |||||||||||||||||| |||||  ||||||| ||| ||||    
T  52735161 tccataagctcttcaagatagctt-acgaaaacaacatataacttatatgaaagtaatttgactttattttatcttttgttacagaaatagcttacgcat 52735063  T
Q  101 aaacacttatatgataa 117  Q
    |   |||||||||||||    
T  52735062 a---acttatatgataa 52735049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 54277402 - 54277460
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| |||||| ||| |||||||| || ||| |||||| ||||||    
T  54277402 ttgactttattttatcttttgttatagaagtagtttatacacaaatacttatctgataa 54277460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 3891555 - 3891501
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||| |  ||||| |||||||||||| ||||| ||||||||||||||    
T  3891555 gactttattttatcct--gttatagaaatagtttattcataagcacttatatgataa 3891501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 27406029 - 27405980
Alignment:
Q  63 ctttattttatcttatgttatggaaatagtttatgcataaacacttatat 112  Q
    |||||||||||||| |  ||| ||||||||||||| ||||||||||||||    
T  27406029 ctttattttatcttttactatagaaatagtttatgaataaacacttatat 27405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 41603484 - 41603549
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaattta 129  Q
    |||||||| |||||||||||  |||||| |||| ||||| ||||||||||| ||||| ||| ||||    
T  41603484 tttattttttcttatgttatataaatagcttatacataagcacttatatgacaaacatttatttta 41603549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 118
Target Start/End: Original strand, 43372035 - 43372116
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||||||||| | ||| ||| |||||| ||||||||||| ||||||  |||||  |||||  |||||||||||||| ||||    
T  43372035 ttatagcttatataaaaacagtttgactgtattttatcttttgttataaaaataccttatgtttaaacacttatatggtaaa 43372116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 7749175 - 7749235
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||| |||| | |||| |||||||  ||| |||||||||||||||| ||||||||||    
T  7749175 tttattttctcttttattatagaaatagcgtatacataaacacttatatggtaaacactta 7749235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 11264278 - 11264226
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||||||||| | |||  |||||||||||| ||||| |||||||||||||    
T  11264278 tttattttatcttttattagtgaaatagtttatacataatcacttatatgata 11264226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 19422400 - 19422332
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    ||||||||||| |||||| |||||| ||||||  |||| ||||| || ||||||||||| | |||||||    
T  19422400 ttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataagcgcttaatt 19422332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30207602 - 30207716
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||| ||||| ||| |||||| ||| | ||| |||||||||||| ||||| ||| |||| |||||||||| || |||||| ||| ||   ||| |||    
T  30207602 tccataatctctctaaggtagctt-atgaaaacaacttatagcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatacat 30207699  T
Q  101 aaacacttatatgataa 117  Q
    || ||||||||||||||    
T  30207700 aagcacttatatgataa 30207716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 39438624 - 39438656
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatag 91  Q
    ||||||||||||||||||||||||| |||||||    
T  39438624 ttgactttattttatcttatgttatagaaatag 39438656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 49219178 - 49219063
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||| ||||  ||||||| |||||| | ||| |||||||||||| |||||  |  ||||||||||||||| || |||||| ||||||  |||| | |    
T  49219178 tccataatctctttaagatag-tttatgaaaacaacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatacct 49219080  T
Q  101 aaacacttatatgataa 117  Q
    || |||| |||||||||    
T  49219079 aaccactcatatgataa 49219063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 53626785 - 53626729
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaa 88  Q
    |||||||||||||||| ||||| ||  |||| ||||||||||||| |||||| ||||    
T  53626785 acagcttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 19177484 - 19177396
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||| ||||| ||| | ||||| |||||||||| |||| | |||||||||||| ||||| |||||||||||||| ||||||    
T  19177484 cttatagcttatatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataatcactta 19177396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 35135727 - 35135815
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||| |||||  || |||||||||||||||||| |||||| ||||||  |||| |||||||||||||||| ||| ||||||    
T  35135727 cttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatgttaagcactta 35135815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 35960396 - 35960338
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| | |||| ||||||||||||||||||| |||||||||||||    
T  35960396 ttgactttattttatcttttattatagaaatagtttatgcataaatacttatatgataa 35960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 14295540 - 14295456
Alignment:
Q  6 aagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatag 91  Q
    |||||||||| |||||||| | | | |||||||||||||||| ||||| ||| |||||||||||||||||| |||||| |||||||    
T  14295540 aagctctccaggatagctt-acgaaaacagcttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 28586827 - 28586911
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||||||  |||| ||||| ||| |||||||||||||||||| |||||| |||||||| ||| ||||| ||| |||||||||    
T  28586827 acagcttataatttatatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataaccacatatatgata 28586911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 985635 - 985584
Alignment:
Q  39 atagcttatgtgaaagcagcttgactttattttatcttatgttatggaaata 90  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  985635 atagcttatgtgaaaacagtttgactttattttatcttttgttatggaaata 985584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 6733983 - 6734045
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||||||  |||||  |||||| ||||||||||||||||||||||||| ||||||    
T  6733983 actttattttatctttcgttataaaaatagattatgcataaacacttatatgataatcactta 6734045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12975386 - 12975294
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagttt 94  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||| ||||| ||  |||| ||||||||||  | |||||| | ||||||||    
T  12975386 tccataagctctccaagatagc-ttatgaacacagcttatagcttatatgaaaacaatttgattttattttattctttgttataggaatagttt 12975294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 20982223 - 20982288
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||||||| | |||||| ||||||| |||| ||||| |||||||||||||| ||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcactta 20982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 32059650 - 32059734
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||| ||||   ||| || |||| ||||| ||||||||||||||    
T  32059650 acagcttatagcttatatgaaaacagtttgactttattttatctta-gttacaaaaacagcttatacataagcacttatatgataa 32059734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 32172662 - 32172577
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||| || || || |||||||| |||||||||| |||| | |||||||||||| ||||| | ||| ||||||||    
T  32172662 acagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataa 32172577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 36646231 - 36646166
Alignment:
Q  50 gaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    |||| ||| ||||||||| |||||||||||||||  ||||||||||||||||| || |||||||||    
T  36646231 gaaaacagtttgactttagtttatcttatgttataaaaatagtttatgcataagcatttatatgat 36646166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 912679 - 912802
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagctt-gactttattttatcttatgttatggaaatagtttatgca 99  Q
    |||||||||| |||||||||| |||||  | ||| ||||| |||||| ||||| ||  || ||||||||||||| || |||||| ||||||  |||| ||    
T  912679 tccataagctttccaagatag-tttataaaaacaacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattca 912777  T
Q  100 taaacacttatatgataaacactta 124  Q
    ||||| |||||||||||| ||||||    
T  912778 taaacgcttatatgataagcactta 912802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 11667166 - 11667102
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    ||||||| || ||||| || ||||||||||||||||| | |||||| ||||||||||||||||||    
T  11667166 tatagctcatatgaaaacaacttgactttattttatcctttgttattgaaatagtttatgcataa 11667102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 35095871 - 35095939
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||||||||||||||| |||||| |||||||||||   |||| |||||||||||||| | |||||||    
T  35095871 ttgactttattttatcttttgttatagaaatagtttaaatataagcacttatatgataagcgcttaatt 35095939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 37063162 - 37063217
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    |||||||||||||||||| |||||| |||||||||||| ||||| || ||||||||    
T  37063162 ttgactttattttatcttttgttatagaaatagtttatacataagcatttatatga 37063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 28578883 - 28578837
Alignment:
Q  50 gaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  28578883 gaaaacagcttgactttattttatcttatgttatagaaatagcttat 28578837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 1019523 - 1019588
Alignment:
Q  50 gaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    |||| ||| ||||||||| |||||||| ||||||  ||||||||||||||||| || |||||||||    
T  1019523 gaaaacagtttgactttagtttatcttttgttattaaaatagtttatgcataagcatttatatgat 1019588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 36539751 - 36539670
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||| ||||| ||| |||||||||||||||||| || ||   |||||| |||  ||||| ||||||||||||||    
T  36539751 cttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttatatgataa 36539670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 7096215 - 7096271
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||| ||||| ||||||    
T  7096215 ttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgat 7096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 11790936 - 11790900
Alignment:
Q  88 atagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11790936 atagtttatgcataagcacttatatgataaacactta 11790900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 18857439 - 18857538
Alignment:
Q  9 ctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactt 108  Q
    |||||||||| ||||| ||| | ||||||||||| ||||   ||| ||  |||||||||||||||| | |||||| ||||||| |||| |||||||||||    
T  18857439 ctctccaagacagctt-atgaaaacagcttatagattatagaaaaacaatttgactttattttatcgtgtgttattgaaatagcttattcataaacactt 18857537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 583838 - 583885
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttat 83  Q
    |||||||||||| ||||| ||| |||||||||||||||||| ||||||    
T  583838 cttatagcttatatgaaaacagtttgactttattttatcttctgttat 583885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 19113211 - 19113270
Alignment:
Q  65 ttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||| || ||||||  ||||||||||| ||||| || ||||||||||||||||||    
T  19113211 ttattttattttttgttataaaaatagtttatacataagcaattatatgataaacactta 19113270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 11095557 - 11095611
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatg 113  Q
    ||||||||||| |||| | |||||| |||||||||||| ||||| ||||||||||    
T  11095557 ttgactttattgtatcatttgttatagaaatagtttatacataatcacttatatg 11095611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 16889744 - 16889674
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||||||||||| | | ||| ||| ||||||| | |||||||| |||||||||||||| |||| |||||    
T  16889744 acagcttatagcttctataaaaacagtttgacttaagtttatcttttgttatggaaatagcttatacataa 16889674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 3970759 - 3970812
Alignment:
Q  50 gaaagcagcttgactttattttatc-ttatgttatggaaatagtttatgcataa 102  Q
    |||||||| |||||||||||||||| || |||||| |||||||||||| |||||    
T  3970759 gaaagcagattgactttattttatctttgtgttatagaaatagtttatccataa 3970812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 8985628 - 8985583
Alignment:
Q  71 tatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||| | |||| |||||||| |||||||||||||||||||||||    
T  8985628 tatcttttattatagaaatagtgtatgcataaacacttatatgata 8985583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 9202781 - 9202901
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||| ||| ||||||| ||| ||| | ||||||||| |||||| ||||| ||  || ||||||||||||||| || ||  ||||||| ||||  ||||    
T  9202781 cataagttcttcaagataactt-atgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataa 9202879  T
Q  103 acacttat-atgataaacactt 123  Q
     ||||||| |||||||||||||    
T  9202880 gcacttatcatgataaacactt 9202901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 12407726 - 12407806
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||| ||||  ||||| ||| || ||||||||||||||| |||||| ||||||| |||| ||| ||||||| ||||||||    
T  12407726 cttataacttacatgaaaacagatttactttattttatcttttgttatagaaatagcttatacat-aacacttgtatgataa 12407806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 12425608 - 12425488
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||| |||||||||||||||  || | ||||||||||||||||  |||| ||  || ||||||||||||||| |  |||  ||||||||||| |||||    
T  12425608 cataagttctccaagatagcttg-tgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatataaatagtttatacataa 12425510  T
Q  103 acacttat-atgataaacactt 123  Q
     |  |||| |||||||||||||    
T  12425509 gcgtttatcatgataaacactt 12425488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 13224406 - 13224353
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||| |||||| ||||||| |||| ||||| ||||| ||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 26516275 - 26516222
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||| |||| | ||||||| |||| ||||| ||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataa 26516222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 32194159 - 32194228
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatg-gaaatagtttatgcataaacacttatatgataa 117  Q
    ||||| || |||||||||||||||| || ||||||  ||| |||| ||||||||| ||||||||||||||    
T  32194159 tgaaaacatcttgactttattttatattttgttataagaagtagtgtatgcataagcacttatatgataa 32194228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 36638719 - 36638670
Alignment:
Q  68 ttttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||| |||||| |||||||||||| ||| ||||| ||||||||||    
T  36638719 ttttatcttttgttatagaaatagtttatacattaacacctatatgataa 36638670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 10303783 - 10303747
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagttta 95  Q
    |||||||||||||||||| |||||| |||||||||||    
T  10303783 ttgactttattttatcttttgttatagaaatagttta 10303747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 11835256 - 11835208
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    ||||||||||||||| ||||||  |||| |||||| |||||||||||||    
T  11835256 actttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 29116998 - 29117086
Alignment:
Q  39 atagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||||||  |||| ||| |||||||||||||||||| |||||| ||||||   ||| ||||| ||  |||||||||| | |||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacataatcagctatatgataagcgcttaatt 29117086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 14482184 - 14482121
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacact 122  Q
    |||||||||||||||||| |||||| |||||||||||| ||||| |||||||||||||| ||||    
T  14482184 ttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataagcact 14482121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 4763927 - 4763849
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    |||||||||||||||||||||| | | |||| ||||||||||||| |||| | ||||||  ||||||||||||||||||    
T  4763927 acagcttatagcttatgtgaaaacggtttgaatttattttatcttttgttgtcgaaataacttatgcataaacacttat 4763849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 39392749 - 39392814
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||||||||| |||||| |||||||||||| ||||  |||||||||||||| ||||||    
T  39392749 ttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgataagcactta 39392814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 39551243 - 39551359
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaa 103  Q
    |||||||||||| || ||||| ||| | ||| |||||||||| | ||||  ||| ||  |||||||||||||| | |||||||| ||| |||| ||||||    
T  39551243 ataagctctccaggaaagctt-atgaaaacaacttatagcttgtatgaagacagtttagctttattttatcttttattatggaagtaggttatacataaa 39551341  T
Q  104 cacttatatgataaacac 121  Q
    ||||||||||||||||||    
T  39551342 cacttatatgataaacac 39551359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 10727202 - 10727114
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||| ||||||||||| ||  |||| ||||||| ||||| || ||| ||||||| |||||||||| |||||||||||| ||||||||    
T  10727202 cttataacttatgtgaaaacactttgaatttatttcatcttttgctatagaaatagcttatgcataagcacttatatgatgaacactta 10727114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4558837 - 4558720
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||| | |||||||| ||| | |||||||||||| ||| |||||  |  || ||||||||||||||| | |||| ||||||| |||| |||    
T  4558837 tccataagctctctaggatagctt-atggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacat 4558739  T
Q  101 aaacacttatatgataaac 119  Q
    ||||||||| || ||||||    
T  4558738 aaacacttacataataaac 4558720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 40728506 - 40728564
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| |||||| ||||||  |||||||| ||||||||||||||||    
T  40728506 ttgactttattttatcttttgttatagaaataacttatgcatgaacacttatatgataa 40728564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 5226582 - 5226525
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||| |||||||||| |||||| ||||| |||||| |||||||||||||||||||||    
T  5226582 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatgataaa 5226525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 787167 - 787255
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    |||| ||||||||||| ||| | ||  |||||||||||||||||||||||| ||||| || |||  ||||| |||||| ||||||||||    
T  787167 acagtttatagcttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataagcacttagatgataaaca 787255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 34770897 - 34770817
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||||||  ||||| ||  |||||||||||||||||| ||| ||||||||||||| | ||||| |||||| ||||||    
T  34770897 cttatagcttaaatgaaaacaatttgactttattttatcttttgtaatggaaatagtttttacataagcacttacatgata 34770817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 28769370 - 28769492
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||| |||||||| ||||||| ||| | ||||||||||||||||  ||||  || ||||||| |||||||  | |||||| | ||||| |||| |||    
T  28769370 tccataaactctccaaaatagctt-atgaaaacagcttatagcttataagaaaatagtttgacttaattttatagtttgttataggaatagcttatacat 28769468  T
Q  101 aaacacttatatgataaacactta 124  Q
    || || ||||||||||| ||||||    
T  28769469 aagcatttatatgataagcactta 28769492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 12972861 - 12972779
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||||||||  ||||| ||| || | ||||||| ||||| |||||| ||||||| |||| ||||| |||||||||||||||    
T  12972861 cttatagcttacatgaaaccagtttaattttatttcatcttctgttattgaaatagcttatacataagcacttatatgataaa 12972779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 1470917 - 1470981
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    |||||||||||||||| |||||| |  |||||||||||||||||| | |||| ||||||| ||||    
T  1470917 acagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttat 1470981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 6918245 - 6918333
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaa 125  Q
    |||||||||||  |||| ||| |||||||||||||||||| | ||||  |||||| ||||  | |||||||||||| |||| |||||||    
T  6918245 ttatagcttattagaaaacagtttgactttattttatcttttattatataaatagcttatatacaaacacttatattataagcacttaa 6918333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 7026738 - 7026654
Alignment:
Q  34 agcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||||| ||||| ||||| ||  || ||||||||||||||| ||||||   | ||| |||||||||| |||||||||||||||    
T  7026738 agcttataccttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataaa 7026654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 11000626 - 11000686
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    ||||||||||||  |||| ||  |||||||||||||||||| |||||||||||||| ||||    
T  11000626 cttatagcttattcgaaaacaatttgactttattttatcttttgttatggaaatagcttat 11000686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29973120 - 29973013
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||| ||||| | |||||||| ||| | ||| ||||||||||||||||||  || |||||||||||||| ||| |||||  ||||||| ||||  ||    
T  29973120 tccataaactctcaaggatagctt-atgaaaacaacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagcttatatat 29973022  T
Q  101 aaacactta 109  Q
    || ||||||    
T  29973021 aagcactta 29973013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 35298570 - 35298625
Alignment:
Q  63 ctttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    |||||||||||||| |||||  ||||||| |||| ||||| |||||||||||||||    
T  35298570 ctttattttatcttttgttactgaaatagcttatacataagcacttatatgataaa 35298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Original strand, 25872469 - 25872559
Alignment:
Q  34 agcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||| ||||| ||||| ||| || ||||||| | ||||| ||| ||| |||||| |||| | ||| |||||||| ||||||||||||    
T  25872469 agcttataacttatatgaaaacagttttactttatatcatcttttgtaatgaaaatagcttatacgtaagcacttatacgataaacactta 25872559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 1112859 - 1112786
Alignment:
Q  35 gcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactt 108  Q
    ||||||||||||||||||| ||  || || |||||||||||| |||||| |||||||  ||| ||||| |||||    
T  1112859 gcttatagcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagcactt 1112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 2364561 - 2364626
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||||||||| || |||  ||||||  ||| |||||| | ||||||||||||||||||    
T  2364561 ttgactttattttatcttttgctataaaaatagcgtatacataaatagttatatgataaacactta 2364626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 3645884 - 3645969
Alignment:
Q  39 atagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||| |||||  || |||| ||| |||||| || | |||| ||||||| |||| || || |||||||||||||||||||||    
T  3645884 atagcttatatgaaaatagtttgattttgttttatattttcttatagaaatagcttatacacaagcacttatatgataaacactta 3645969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 8062297 - 8062232
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||||||||||||||| | |||||| ||||  || ||| ||||||||||| |||||||||| ||||    
T  8062297 ttgactttattttatcatttgttatagaaagggtgtatacataaacacttctatgataaacgctta 8062232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 11056732 - 11056813
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||| |||||  || |  ||||||||||  ||| |||||| ||||||| | |||||| ||||||||||||||||    
T  11056732 cttatagcttatatgaaaatagttcaactttatttttccttttgttatagaaatagctcatgcatgaacacttatatgataa 11056813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 30988053 - 30988138
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||| ||||| | ||||||| |||| |||||||||| |  |||||| ||||||  |||| || ||| |||||||||||||    
T  30988053 acagcttataacttatttaaaagcagtttgattttattttatatcttgttattgaaataaattatacaaaaaaacttatatgataa 30988138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 6509337 - 6509408
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatctt 76  Q
    |||||||||||| |||||||| ||| | |||||||||||||||| | ||  ||  ||||||||||||||||||    
T  6509337 ataagctctccaggatagctt-atgaaaacagcttatagcttatataaatacaatttgactttattttatctt 6509408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 33209283 - 33209367
Alignment:
Q  34 agcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||||||| |||| ||||| ||| | ||||||||||||||||   |||| ||||||| ||||  ||| |||||| |||||||||    
T  33209283 agcttatagtttatatgaaaacagttcgactttattttatctttcattatagaaatagcttatttatagacacttgtatgataaa 33209367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 33787776 - 33787877
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||||||||||||| ||| ||| | |||||||||| ||||| ||||| ||  |||||||| |||||| || |||||| |||||||||||| |||    
T  33787776 tccataagctctccaagataactt-atgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacat 33787874  T
Q  101 aaa 103  Q
    |||    
T  33787875 aaa 33787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 2456943 - 2456884
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||    
T  2456943 tgaaagcagcttgactttattttatctt-tgttatcgaaatagtttatacataagcactta 2456884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 31672546 - 31672614
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||| ||| ||||||||||||||| || ||| ||||||||||||||| ||||||||||| ||||||||    
T  31672546 tgaaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgataa 31672614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 21959732 - 21959651
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||||||||| || || ||  |||||||||||||||||| |||||||||||||| |||| | ||| ||||| |||||||||    
T  21959732 ttatagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcacttctatgataaa 21959651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 281879 - 281973
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    ||||| ||||||| | |||||||| ||| | |||||||||||||||| ||||| ||  |||||||||||||||||| |||||| | ||||| ||||    
T  281879 tccatgagctctctaggatagctt-atgaacacagcttatagcttatatgaaaacaagttgactttattttatcttttgttataggaatagcttat 281973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 3169312 - 3169391
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||| ||| | || ||||||| ||||| |||||| ||||||| |||  ||||| ||||||||||||||    
T  3169312 tatagcttatgtgaaaacagttcgaatttatttcatcttttgttatagaaataggttacacataagcacttatatgataa 3169391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 7714025 - 7713950
Alignment:
Q  41 agcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||| ||||| ||  |||||||||||||||||| ||||||| || |||||||| ||||| | |||||||||||    
T  7714025 agcttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgata 7713950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 8349755 - 8349810
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||||| |||||  |||||||||||| || |||||||||||||||||    
T  8349755 actttattttatcttttgttagagaaatagtttatacacaaacacttatatgataa 8349810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 8010348 - 8010271
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||| || |||||||||||||||  | |||||| ||||||| |||| | ||| ||||||||||||||||||||||||    
T  8010348 tgaaagtagattgactttattttattgt-tgttatagaaatagcttatacctaagcacttatatgataaacacttaatt 8010271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 29269878 - 29269820
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| |||||| |||||||||||| || || || |||||||||||    
T  29269878 ttgactttattttatcttctgttatagaaatagtttatacacaagcatttatatgataa 29269820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 10452412 - 10452505
Alignment:
Q  23 tttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||| | ||| |||||||||||| |||||  || |||| |||||||||| || |||||| ||||||| |||| ||||| |||| ||||||||    
T  10452412 tttatggaaacaacttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatgata 10452505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 29274290 - 29274375
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||| ||||||||||| ||||| ||  |||||||||||||||||| || ||| ||||||| |||| ||||| || || ||||||||    
T  29274290 acagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataa 29274375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 34671139 - 34671224
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||| |||||  || | |||||||||| |||| ||||| |||||| ||||||| |||| | |||||||||||| |||||    
T  34671139 acagcttatagattatgcaaacgaagcttgacttaatttaatcttgtgttatagaaatagcttattcgtaaacacttatacgataa 34671224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 1810393 - 1810445
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||||||||| |||||| ||||||| || ||||||| |||||||||||||    
T  1810393 tttattttatcttttgttatagaaatagcttttgcataagcacttatatgata 1810445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 3204611 - 3204687
Alignment:
Q  40 tagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||| ||||| ||| | |||||||||||||||| | |||| ||| |||||||| | ||| |||||||||||||    
T  3204611 tagcttatatgaaaacagttcgactttattttatcttttattatagaagtagtttattcgtaagcacttatatgata 3204687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 13360719 - 13360659
Alignment:
Q  57 gcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||||||| || |||||| ||||||||||   ||||| ||||||||||||||    
T  13360719 gcttgactttattttatattttgttatagaaatagtttgcacataagcacttatatgataa 13360659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 4248940 - 4248885
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    |||||||||||||||||| |||||| ||||||| ||||  |||| |||||||||||    
T  4248940 ttgactttattttatcttttgttattgaaatagcttatatataagcacttatatga 4248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 10032582 - 10032495
Alignment:
Q  30 agacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| |||||  || ||| |||||||| | ||  ||||||  |||||| |||| |||||||| |||||||||||    
T  10032582 agacagcttatagcttatatgaaattagtttgcctttatttcacctattgttataaaaatagcttatacataaacatttatatgataa 10032495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 30523918 - 30523855
Alignment:
Q  60 tgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactt 123  Q
    ||||||||||||||||| |||| ||||||||  || | || || ||||||||||||||||||||    
T  30523918 tgactttattttatcttctgttgtggaaataacttgtacaaaagcacttatatgataaacactt 30523855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 2514684 - 2514626
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| | |||| ||||||| |||| ||||| |||||| |||||||    
T  2514684 ttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataa 2514626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 4006719 - 4006645
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    |||||||||||| | ||| ||  |||||||||||||||| | |||||| ||||||  |||||||||| |||||||    
T  4006719 cttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 4247731 - 4247785
Alignment:
Q  68 ttttatcttatgttatggaaatagtttatgcataaacacttatatgataaacact 122  Q
    ||||||||| |||||| ||||||| |||| ||||| |||||| ||||||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataagcacttacatgataaacact 4247785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 5550141 - 5550059
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatga 114  Q
    |||||||||||||||| ||||| ||  |||||||||| ||||||  | |||| |||||| | ||| ||||| |||||||||||    
T  5550141 acagcttatagcttatatgaaaacaatttgactttatgttatctcttattatcgaaatactatatacataagcacttatatga 5550059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 24774740 - 24774682
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||||| || |||||| ||||||||||||  |||| |||||| |||||||    
T  24774740 ttgactttattttatattttgttatagaaatagtttatatataagcacttacatgataa 24774682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 32386630 - 32386712
Alignment:
Q  38 tatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    |||| ||||| ||||| ||  ||||| |||||||||||| | |||  |||||||| ||| ||||| |||||||||||||||||    
T  32386630 tataccttatatgaaaacaatttgaccttattttatcttttcttagtgaaatagtctatacataagcacttatatgataaaca 32386712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 32513806 - 32513741
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatg-ataaacactta 124  Q
    ||||||||||||||| || |||||| ||||||  ||||||||||||||| ||||| |||||||||||    
T  32513806 ttgactttattttatttt-tgttatagaaataacttatgcataaacactaatatgaataaacactta 32513741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 33911372 - 33911434
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||| ||||| ||||||  |||||| |||| ||||||||||||||| |||| ||||||    
T  33911372 actttatttgatcttttgttataaaaatagattatacataaacacttatattataatcactta 33911434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1401148 - 1401080
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattt 70  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||||||   ||||||| |||| |||||||    
T  1401148 tccataagctctccatgatagc-ttatgaaaacagcttatagcttatactaaagcagtttgattttattt 1401080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7785775 - 7785847
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatctt 76  Q
    |||||||||||||||| |||||   ||| |||||  ||||||||||| |||||  || ||||||||||||||||||    
T  7785775 tccataagctctccaaaatagc---atgaagacaatttatagcttatatgaaaagagtttgactttattttatctt 7785847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 10016575 - 10016463
Alignment:
Q  10 tctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    ||||||| ||||||| ||| | ||||||||| |||||| ||| | ||| || | ||||||||||||| || | | ||||||| |||| |||||  |||||    
T  10016575 tctccaacatagctt-atgaaaacagcttatggcttatatgagaacagtttaaatttattttatcttttggtttagaaatagcttatacataaggactta 10016477  T
Q  110 tatgataaacactt 123  Q
    ||||| ||||||||    
T  10016476 tatgagaaacactt 10016463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 10400306 - 10400183
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttatttt-atcttatgttatggaaatagtttatgcata 101  Q
    ||||||||| ||| |||| ||| ||| ||||| |||||||||||| ||| | ||  ||||||||||||| ||||| | ||||  |||||| |||| ||||    
T  10400306 cataagctcaccaggatatctt-atgaagacatcttatagcttatatgataacaatttgactttatttttatcttttattata-aaatagcttatacata 10400209  T
Q  102 aacacttatatgataaacacttaatt 127  Q
    |||| ||||||||||| | |||||||    
T  10400208 aacatttatatgataagcccttaatt 10400183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 24836287 - 24836340
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatat 112  Q
    |||||||||||||||||| |||||| ||||||  |||| |||||| ||||||||    
T  24836287 ttgactttattttatcttttgttatagaaataacttatacataaatacttatat 24836340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 35095015 - 35095075
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaac 119  Q
    ||||| ||||||||| || |||||| ||||| |||||| |||||  |||||||||||||||    
T  35095015 ttgacattattttatattttgttatagaaatggtttatacataattacttatatgataaac 35095075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 41028919 - 41028997
Alignment:
Q  39 atagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||| ||||| ||| ||||||||||||| |||| |||||| ||||||| |||| ||||| ||||||||||||||    
T  41028919 atagcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataa 41028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 38462290 - 38462205
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||| ||||||| ||| ||||| ||| |||||||||||||||||| || ||| ||||||| ||||  |||||||||||||||||||    
T  38462290 acagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataa 38462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 24887315 - 24887408
Alignment:
Q  2 ccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    |||||||||||||| |||||||| ||| | ||||||| |||||||| ||||  ||| |||||||||||||||||  |||||| ||||||| ||||    
T  24887315 ccataagctctccaggatagctt-atgaaaacagcttttagcttatatgaatacagtttgactttattttatctattgttatagaaatagcttat 24887408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 25183049 - 25183134
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgca-taaacacttatatgata 116  Q
    ||||||||||||| || |||||  ||||| ||||||||| ||||| ||||||  ||||||||||| || |||||||||||||||||    
T  25183049 acagcttatagctcatatgaaaatagcttaactttatttaatcttttgttataaaaatagtttatacattaaacacttatatgata 25183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 27792908 - 27792789
Alignment:
Q  4 ataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaa 103  Q
    ||||||||| || ||||| |||||| | ||| |||  ||||||| |||||  || ||||| |||||||||||| |||| | ||||||| |||| |||||     
T  27792908 ataagctctacatgatag-tttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataag 27792810  T
Q  104 cacttatatgataaacactta 124  Q
    |||||||||||||||| ||||    
T  27792809 cacttatatgataaactctta 27792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 34958314 - 34958254
Alignment:
Q  55 cagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||   ||||||||||    
T  34958314 cagcttgactttattttatcttgtgttatagaaatagtttattcataagtgcttatatgat 34958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 36139915 - 36139809
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||||||| ||||||||  | ||| | ||| ||||||||||||  |||| ||| |||||||||||||||||||| |||  ||||||| |||| |||||    
T  36139915 cataagctcttcaagatagtataatgaa-acaacttatagcttatacgaaatcagtttgactttattttatcttatattacagaaatagcttattcataa 36139817  T
Q  103 acacttat 110  Q
     |||||||    
T  36139816 ccacttat 36139809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 20192667 - 20192744
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    ||||||||||| |||| ||||| | | |||||||||||||||||| ||||||  |||||| |||| ||||| ||||||    
T  20192667 acagcttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 32703142 - 32703061
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||||||||| ||||| ||  |||| ||||||||||||| | | || ||||||| |||| |||||||| ||||||||||||    
T  32703142 ttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataaa 32703061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 34954080 - 34954031
Alignment:
Q  44 ttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtt 93  Q
    |||| ||||| |||||||||||||||||||||| |||||| |||||||||    
T  34954080 ttatatgaaaacagcttgactttattttatcttgtgttatagaaatagtt 34954031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 36101573 - 36101492
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| ||||  |||| ||| |||||||||||||||||||| |||  ||||||| |||| ||||| ||||||| ||||||    
T  36101573 cttatagattatacgaaatcagtttgactttattttatcttatattacagaaatagcttattcataaccacttatttgataa 36101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 49586984 - 49587041
Alignment:
Q  39 atagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttat 96  Q
    ||||||||| ||||| ||| |||||||||||||||||| |||||| ||||||| ||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttat 49587041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 52450123 - 52450204
Alignment:
Q  42 gcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactt 123  Q
    |||||| ||||| | | |||||||||||| ||||| |||||| ||||| | ||||||||||  |||| ||||||||||||||    
T  52450123 gcttatttgaaaactgtttgactttatttcatcttttgttatagaaattgcttatgcataagtacttgtatgataaacactt 52450204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 25185974 - 25185907
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||||||||| ||||| ||||||  |||||  |||| ||||| ||||||||||||||||||||||||    
T  25185974 ttgactttattt-atcttttgttatataaatatcttattcataagcacttatatgataaacacttaatt 25185907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 43116493 - 43116577
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    |||||||||||| |||||   | |||| || |||||||||| |||||| ||||||| |||  ||||||||||| |||||||||||    
T  43116493 cttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataaaca 43116577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 33405200 - 33405290
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagttt 94  Q
    |||||| ||| ||||||||||| ||| | |||||||||||||||| ||||| ||  || ||||||||||| ||| || ||| ||||||||||    
T  33405200 cataagttcttcaagatagctt-atgaaaacagcttatagcttatatgaaaacaaattaactttattttaccttttgctatagaaatagttt 33405290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 40122818 - 40122900
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaac 119  Q
    |||||||||| | ||||| ||| |||||||||||||||||| |||||| ||||||| |||| |||||  ||| ||| |||||||    
T  40122818 cttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataagtactgatacgataaac 40122900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23785294 - 23785174
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||| || |||||  || | |||| ||||||||||| ||||  ||| |||||||||||||||||| || | | ||||||  ||||||||    
T  23785294 tccataagctctccatgagagcttg-tgaaaacagtttatagcttatatgaatacagtttgactttattttatcttctgctgtagaaataacttatgcat 23785196  T
Q  101 aa--acacttatatgataaaca 120  Q
    ||  | | ||||||||||||||    
T  23785195 aagcatatttatatgataaaca 23785174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 28283675 - 28283733
Alignment:
Q  69 tttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||||| |||||| ||| ||  |||||||||| |||||||||||||||| |||||||    
T  28283675 tttatcttttgttatagaagtaacttatgcataagcacttatatgataaacgcttaatt 28283733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 32663614 - 32663560
Alignment:
Q  69 tttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactt 123  Q
    |||||||| |||||| ||||||  ||||||||||||| || ||||||||||||||    
T  32663614 tttatcttttgttatagaaataacttatgcataaacaattgtatgataaacactt 32663560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 44374732 - 44374790
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| |||||  || |||| |||| ||||| ||||||||||||||    
T  44374732 ttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataa 44374790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 53457359 - 53457301
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||||||||| |||||| ||| ||| |||| | |||||||||| |||||||    
T  53457359 ttgactttattttatcttttgttatcgaagtagcttatacgtaaacacttaaatgataa 53457301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 905058 - 905115
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||||||||||||| |||||| ||||||| |||| | ||| | |||||||||||    
T  905058 ttgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 24268243 - 24268308
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||| |||||| ||| || ||| |||||||||||| ||||| ||||| |||||||||| ||||    
T  24268243 ttgacttgattttaacttttgctatagaaatagtttatacataagcacttgtatgataaacgctta 24268308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33965520 - 33965603
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagc--ttatgtgaaagcagcttgactttattttatcttatgttat 83  Q
    |||||||||||| ||||||||| ||||| | ||| ||||||||  |||| ||||| ||| |||||||||||||| ||| ||||||    
T  33965520 tccataagctcttcaagatagc-ttatgaaaacatcttatagcttttatatgaaaacagtttgactttattttaccttttgttat 33965603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 47584513 - 47584397
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||||||| |||| |||  || || ||||||||||  | ||| | | |||||||||||||| ||| ||| || ||||||| |||  |||    
T  47584513 tccataagctctccaagattgctt-atgaggaaagtttatagcttacattaaaacggtttgactttattttaccttttgtcatagaaatagcttacacat 47584415  T
Q  101 aaacacttatatgataaa 118  Q
    |||  |||||||||||||    
T  47584414 aaaaccttatatgataaa 47584397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 2128342 - 2128390
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    ||||||||||||||| |||||| ||||||| |||| ||||||| |||||    
T  2128342 actttattttatcttttgttatagaaatagcttatacataaacgcttat 2128390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 2201137 - 2201093
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatctt 76  Q
    |||||||||||||||| ||||| ||| |||||||| |||||||||    
T  2201137 acagcttatagcttatatgaaaacagtttgactttgttttatctt 2201093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 12923390 - 12923430
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatctt 76  Q
    ||||||||||||  |||||||| ||||||||||||||||||    
T  12923390 cttatagcttataagaaagcagtttgactttattttatctt 12923430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 16790181 - 16790241
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||||||| |||||| ||||||  ||||  |||| |||||||||||||||| ||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataaacgctta 16790241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 20349566 - 20349630
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaa 125  Q
    ||||| |||||||| | |||||  ||||||| |||| || ||||||||||||||||| |||||||    
T  20349566 gacttcattttatcctttgttactgaaatagcttatacacaaacacttatatgataagcacttaa 20349630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 36783375 - 36783474
Alignment:
Q  11 ctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatag-tttatgcataaacactta 109  Q
    |||||| ||||||| ||| | |||||| |||| |||| ||||| ||  || ||||||||||||||| || ||| ||||||| ||||| ||||||||||||    
T  36783375 ctccaatatagctt-atgaaaacagctaatagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctttatacataaacactta 36783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27481325 - 27481443
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||||| |||| |||||||| ||| | | | |||||||||||| || || ||| |||||||  ||||||| | |||||| ||||||| |||| |||    
T  27481325 tccataagctatccatgatagctt-atgaaaataacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatacat 27481423  T
Q  101 aaacacttatatgataaaca 120  Q
    |||||||||||| |||||||    
T  27481424 aaacacttatataataaaca 27481443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 35536114 - 35536031
Alignment:
Q  34 agcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||| ||||| ||||| ||  ||||||||||||||||||||||||| ||||||| |||| ||||| |  |||||||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataagcctttatatgataa 35536031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27548302 - 27548186
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    |||||||| | ||||||||||||| ||| | |||||||||||||||  ||||| ||  | |||||||||||||||| || || |||||||| ||||  ||    
T  27548302 tccataagttatccaagatagctt-atgaaaacagcttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagat 27548204  T
Q  101 aaacacttatatgataaa 118  Q
    || |||||||| ||||||    
T  27548203 aagcacttataagataaa 27548186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 30496686 - 30496629
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    ||||||||||||||| || |||||| |||||||||||| ||||||||||||| |||||    
T  30496686 ttgactttattttatattttgttatagaaatagtttatacataaacacttatgtgata 30496629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 5373205 - 5373138
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaattt 128  Q
    |||||||||||||||| |||||| |||||||  ||| ||||| |||||| ||||||| ||||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcacttacatgataagcacttaattt 5373138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 30751499 - 30751432
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaat 126  Q
    ||||||||||||||| || |||||   ||||||||||| || || |||||||||||||||||||||||    
T  30751499 ttgactttattttatattttgttacaaaaatagtttattcacaagcacttatatgataaacacttaat 30751432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 46223162 - 46223212
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttata 111  Q
    ||||||| |||||||| |||||||||||||| |||| ||||||||||||||    
T  46223162 gactttaatttatcttttgttatggaaatagcttatacataaacacttata 46223212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 49060522 - 49060464
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||||||| || |||||| ||||||| |||| |||||| |||||||||||||    
T  49060522 ttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataa 49060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 1431396 - 1431461
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||||||||| ||   |||||||||||  |||| |||||||||||||||||||| ||||||    
T  1431396 ttgactttattttatttttcattatggaaataacttatacataaacacttatatgataagcactta 1431461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 7244694 - 7244625
Alignment:
Q  49 tgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||| ||| |||||||| ||||||||| || ||| ||||||| |||| ||||| |||||||||||||||    
T  7244694 tgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataaa 7244625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22759225 - 22759109
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||  |||||||| ||| |  |||||| |||||||| ||||| ||  ||  |||||||||||||| ||||||  |||||| |||  |||    
T  22759225 tccataagctctcctggatagctt-atgaaatcagcttttagcttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacat 22759127  T
Q  101 aaacacttatatgataaa 118  Q
    |||| |||||||||||||    
T  22759126 aaacgcttatatgataaa 22759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 30456483 - 30456594
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    ||||||||||||||||||| |||||| | ||  |||||| ||||| ||||| ||  |||||||||||||||||| |||| | |||||||    | |||||    
T  30456483 cataagctctccaagatag-tttatgaaaaccacttataacttatatgaaaacaatttgactttattttatcttttgttttagaaatag---ctacataa 30456578  T
Q  103 acacttatatgataaa 118  Q
    ||||||| ||||||||    
T  30456579 acacttaaatgataaa 30456594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 31002770 - 31002693
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacactta 109  Q
    |||||||||||||||| |||||  |  |||||||||||||||||| |||  | |||||||||||| ||||| ||||||    
T  31002770 acagcttatagcttatatgaaaatattttgactttattttatcttttgtggttgaaatagtttatacataagcactta 31002693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 45593791 - 45593872
Alignment:
Q  43 cttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||| ||||| ||| ||||||||||||||| || |||||  ||||||| |||| ||||| || ||||||||||||| ||||    
T  45593791 cttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataaactctta 45593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 47004069 - 47004008
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    |||||||||||||||||  |||||| ||||||| |||   ||||||||||||||||||||||    
T  47004069 ttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataaaca 47004008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 1417269 - 1417201
Alignment:
Q  36 cttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaac 104  Q
    ||||| |||||| ||||| ||  |||||||||||||||||| ||||||  ||||||||||| |||||||    
T  1417269 cttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaac 1417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 27626212 - 27626280
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    |||||||||||||| ||| || ||| ||||||| |||| |||||||| |||||  ||||||||||||||    
T  27626212 ttgactttattttagcttttgatatagaaatagcttatacataaacaattatagcataaacacttaatt 27626280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 28165130 - 28165023
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcat 100  Q
    ||||||||||||||| |||||||| ||  |||||| ||||||||||| | ||| ||  ||||||| |||||||||| |||||| |||| |  |||| |||    
T  28165130 tccataagctctccatgatagctt-ataaagacagtttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacat 28165032  T
Q  101 aaacactta 109  Q
    || ||||||    
T  28165031 aagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 39551614 - 39551694
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||||| ||||| ||| || |||||| | |||||| |||||| ||||||| |||| | |||| |||||||||||||    
T  39551614 ttatagcttatatgaaaacagttttactttagtatatcttttgttatagaaatagcttatacttaaatacttatatgataa 39551694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 12110397 - 12110299
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||| ||| ||||||||||| ||| | ||||||||||||||||   ||| ||  |||||||||||||||||| ||| || ||||||| |||| |||||    
T  12110397 cataagttcttcaagatagctt-atgaaaacagcttatagcttataccaaaacaatttgactttattttatcttgtgtaatagaaataggttattcataa 12110299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 33894622 - 33894544
Alignment:
Q  41 agcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaaca 120  Q
    ||||||| ||||| ||| ||||||| |||||||||| |||||| ||||||| |||| ||||| |||||| ||||| ||||    
T  33894622 agcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcacttacatgatgaaca 33894544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 2223130 - 2223072
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||||  |||||||| |||||| ||||||| |||| |||||||||||||| |||||    
T  2223130 ttgacttttctttatcttttgttatagaaatagcttatacataaacacttatacgataa 2223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 11721314 - 11721372
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||| ||||| ||| |||||| ||||||||||||  | |||||||||||||||||    
T  11721314 ttgactttcttttaacttttgttatagaaatagtttataaagaaacacttatatgataa 11721372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 15328585 - 15328535
Alignment:
Q  62 actttattttatcttatgttatggaaatagtttatgcataaacacttatat 112  Q
    ||||||||||||||| | |||| ||||||| |||||||||| |||||||||    
T  15328585 actttattttatcttttattatagaaatagattatgcataagcacttatat 15328535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 25511609 - 25511551
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    |||||||||||| ||||| |||||| |||||| ||||| ||  ||||||||||||||||    
T  25511609 ttgactttatttcatcttttgttatagaaataatttatacaacaacacttatatgataa 25511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 36598408 - 36598474
Alignment:
Q  58 cttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||| ||| | || |||| || ||||||| |||| |||||||||| ||||||||||||||||    
T  36598408 cttgactttctttaacctcatgtcatagaaatagcttatacataaacactaatatgataaacactta 36598474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 5272881 - 5272954
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaaca 105  Q
    ||||||| |||||||| ||||| ||   |||||| |||||||||| ||||||  ||||||||||| ||||||||    
T  5272881 acagcttctagcttatatgaaaacaatgtgacttaattttatcttttgttatataaatagtttatacataaaca 5272954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 29574688 - 29574757
Alignment:
Q  58 cttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    ||||||||||||| ||||| ||| ||  |||||| |||| ||||| || ||||||||||||| |||||||    
T  29574688 cttgactttatttcatcttttgtcataaaaatagcttatacataagcatttatatgataaacgcttaatt 29574757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 30134057 - 30133980
Alignment:
Q  33 cagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttat 110  Q
    ||||||| |||||||  |||| ||  |||||||||||||||||| |||| |  |||||| |||| |||||||||||||    
T  30134057 cagcttaaagcttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacacttat 30133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 35808992 - 35809041
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacactt 108  Q
    |||||| ||||||||||| |||||| ||||||| |||| |||||||||||    
T  35808992 ttgactatattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 47007025 - 47006972
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| ||||| |||||| |||| ||||||| ||||| ||||||||||||||    
T  47007025 tttatttgatcttttgttatagaaaaagtttatacataagcacttatatgataa 47006972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 1350275 - 1350382
Alignment:
Q  3 cataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataa 102  Q
    |||||||||| || ||||| |||||| | ||||||||||| ||||||||||  || |||||||| |||| ||   |||||| ||||||  |||| |||||    
T  1350275 cataagctcttcaggatag-tttatgaaaacagcttatagattatgtgaaaaaagtttgactttcttttgtcaattgttatagaaataacttattcataa 1350373  T
Q  103 acacttata 111  Q
     ||||||||    
T  1350374 gcacttata 1350382  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 2048094 - 2048146
Alignment:
Q  24 ttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatctt 76  Q
    ||||||| | |||||||||||||| ||||| ||| ||||||||| ||||||||    
T  2048094 ttatgtaaaaagcttatagcttatctgaaatcagtttgactttaatttatctt 2048146  T

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Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 5006575 - 5006639
Alignment:
Q  37 ttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcata 101  Q
    ||||| ||||| ||||| ||| |||||||||||||||||| |||||| | ||||| |||| ||||    
T  5006575 ttataccttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

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Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 24973926 - 24973870
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgat 115  Q
    |||| ||||||||||||| |||||| ||||||| || | ||||| ||||||||||||    
T  24973926 ttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

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Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 27389344 - 27389300
Alignment:
Q  80 ttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    |||| ||||||| |||| |||||||||||||||||||| ||||||    
T  27389344 ttatagaaatagcttatacataaacacttatatgataagcactta 27389300  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 29363557 - 29363478
Alignment:
Q  1 tccataagctctccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgtt 81  Q
    ||||||||||||||| |||| ||| |||   |||||||||| || || ||||| ||| |||||||||||||||||| ||||    
T  29363557 tccataagctctccaggataactt-atgataacagcttataactaatatgaaaacagtttgactttattttatcttctgtt 29363478  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 42281587 - 42281655
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatt 127  Q
    ||||||| |||||||  | ||| || ||||||| |||| ||| |||||| |||||||||||||||||||    
T  42281587 ttgacttcattttattgtttgtcatagaaatagcttatacattaacactcatatgataaacacttaatt 42281655  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 46091573 - 46091505
Alignment:
Q  64 tttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaacacttaatttaatt 132  Q
    |||||||||||||  ||||| | ||||| |||||||||| |||| || |||||||||||| ||| ||||    
T  46091573 tttattttatctttcgttataggaatagcttatgcataagcactcatgtgataaacacttcattaaatt 46091505  T

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Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 1162 - 1219
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||| |||||||||||||    
T  1162 ttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

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Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 2813 - 2756
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgata 116  Q
    |||||||||||||||||| |||||| ||||||| |||| ||||| |||||||||||||    
T  2813 ttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

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Target: scaffold0091 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 5999 - 5942
Alignment:
Q  61 gactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataaa 118  Q
    ||||| |||||||||| |||||| ||||| |||||| |||||||||||||||||||||    
T  5999 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatgataaa 5942  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 27603 - 27500
Alignment:
Q  13 ccaagatagctttatgtagacagcttatagcttatgtgaaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatat 112  Q
    ||||||||| |||||| | ||| ||||||| |||| ||||| ||  |||||||||||||||||| |||||| ||||||  |||| ||||| |||||| ||    
T  27603 ccaagatag-tttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacat 27505  T
Q  113 gataa 117  Q
    |||||    
T  27504 gataa 27500  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 6725 - 6783
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| | ||||| || |||||| |||||||||||| ||||| ||||||||||||||    
T  6725 ttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataa 6783  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 143141 - 143207
Alignment:
Q  51 aaagcagcttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| ||||| |||||||||||| |||||| ||||||| | || ||||| | ||||||||||||    
T  143141 aaagcagtttgacattattttatcttgtgttatagaaatagctaattcataagcgcttatatgataa 143207  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 116644 - 116702
Alignment:
Q  59 ttgactttattttatcttatgttatggaaatagtttatgcataaacacttatatgataa 117  Q
    ||||||| | ||||| || |||||| |||||||||||| ||||| ||||||||||||||    
T  116644 ttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataa 116702  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 4284 - 4377
Alignment:
Q  32 acagcttatagcttatgtgaaagcagcttgactttattttatct-tatgttatggaaatagtttatgcataaacacttatatgataaacactta 124  Q
    ||||||||||| |||| ||||| | | ||||||||||||||||| | | |||| ||||||| ||||  |||| ||| ||||||| |||||||||    
T  4284 acagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 4377  T

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