View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16768_high_60 (Length: 215)
Name: NF16768_high_60
Description: NF16768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16768_high_60 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 42246486 - 42246668
Alignment:
| Q |
15 |
agcaaaggactcatatgatgtggttgggttggatctacaatggttctttcaaatattgaagagaagagaacaagaaaacacggagaaaacaaaaacaatg |
114 |
Q |
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| T |
42246486 |
agcaaaggactcatatgatgtggttgggttggatctacaatggttctttcaaatattgaagagaagagaacaagaaaacacggagaaagcaaaaacaatg |
42246585 |
T |
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| Q |
115 |
gagagaatatcataaggggcaacacactttaaaactgaaagtaatcctatggcatgctataaaccatgaaatttagtgtttac |
197 |
Q |
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| T |
42246586 |
gagagaatatcataaggggcaacacactttaaaactgaaagtaatcctatggcatgctataaaccatgaaatttagtgtttac |
42246668 |
T |
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