View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16768_high_61 (Length: 212)
Name: NF16768_high_61
Description: NF16768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16768_high_61 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 35329507 - 35329718
Alignment:
| Q |
1 |
tctggttgcacacacatcgtcgcaatcgctgctacctggataacatctttcattgagtactgtccctccaatgctggatccataatctttacaacctttt |
100 |
Q |
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| T |
35329507 |
tctggttgcacacacattgtcgcaatcgccgctacctggataacatctttcattgagtactgtccctccaatgctggatccataatctttacaacctttt |
35329606 |
T |
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| Q |
101 |
ctctatcagtcaaaagtggcaaagcctaaacacaaacagtgcatgcaagtttggtaaagaagtgcaagtgatatataggtaataagcttcttgtaagtac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35329607 |
ctctatcagtcaaaagtggcaaagcctaaacacaaacagtgcatgcgagtttggtaaagaagtgcaagtgatatataggtaataagcttcttgtaagtac |
35329706 |
T |
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| Q |
201 |
aaatactagaat |
212 |
Q |
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| T |
35329707 |
acatactagaat |
35329718 |
T |
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