View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16768_low_55 (Length: 241)
Name: NF16768_low_55
Description: NF16768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16768_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 1090592 - 1090801
Alignment:
| Q |
18 |
atccaaagcactcaaatcagcaacagtaggtgtatcaagtgcaactaaaggagtctcacattatcacgttaaatggaaaaatgaattttgagcatcatat |
117 |
Q |
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| T |
1090592 |
atccaaagcactcaaatcagcaacagtaggtgtatcaagtgcaagtaaaggagtctcacattatcacgttaaatggaaaaatgaattttgagcatcatat |
1090691 |
T |
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| Q |
118 |
aaatgaaagaaaccacataccaatccgtttgtatggttaaatgctcaaaatccaatgtcatgatccctaattatttttcctcccctcataattcaacata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
1090692 |
aaatgaaagaaaccacataccaatccgtttgtatggctaaatgctcaaaatccaatgtcatgatccctaattatttttcttcccctcataattcaacata |
1090791 |
T |
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| Q |
218 |
agttacactt |
227 |
Q |
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|||||||||| |
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| T |
1090792 |
agttacactt |
1090801 |
T |
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