View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16769_low_16 (Length: 302)
Name: NF16769_low_16
Description: NF16769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16769_low_16 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 134; Significance: 9e-70; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 133 - 282
Target Start/End: Original strand, 46437506 - 46437655
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
46437506 |
acaaaacacaattcacaatcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcaatcagcagcatcattttctctcttcact |
46437605 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaagcca |
282 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46437606 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaagcca |
46437655 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 39780485 - 39780557
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||| |||| |
|
|
| T |
39780485 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcaacaacataattttctctcttcactc |
39780557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 131; Significance: 6e-68; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 18431558 - 18431412
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
18431558 |
acaaatcacaattcacaatcgtctttcttctcacaacaaacaaacaaacctctccttcttccactctcatcagtcagcaacatcattttctctcttcact |
18431459 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaag |
279 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18431458 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaag |
18431412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 278
Target Start/End: Complemental strand, 22788310 - 22788168
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
22788310 |
acaaatcacaattcacaatcttctttcttctcacaacaaacaaacaaacctctc---cttccactctcatcagtcagcagcatcattttctctcttcact |
22788214 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaa |
278 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
22788213 |
ccttcttcaattctagtgtatctctcaattctcactctaagtctaa |
22788168 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 1014321 - 1014386
Alignment:
| Q |
165 |
acaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| |||| || ||| |||||||||||| |||| |
|
|
| T |
1014321 |
acaacaaacaaacaaacctctc---cttccactctcatcggtcaacaacataattttctctcttcactc |
1014386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 133 - 279
Target Start/End: Complemental strand, 16916291 - 16916148
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||| ||| |
|
|
| T |
16916291 |
acaaatcacaattcacaatcgtctttcttctcacaacaaacaaacaaacctctccttcttccactctcatcagtcagcaacaacattttctctcttcact |
16916192 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaag |
279 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16916191 |
c---cttcaaatctagtgtatctctcagttctcactctaagtctaag |
16916148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 4076437 - 4076365
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||| ||||||||||||||| || ||| |||||||||||| |||| |
|
|
| T |
4076437 |
tcttcttacaacaaacaaacaaacctctctttc---cactctcatcagtcaacaacataattttctctcttcactc |
4076365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Original strand, 2819791 - 2819832
Alignment:
| Q |
234 |
cttcttcaaatctagtgtatctctcagttctcactctaagtc |
275 |
Q |
| |
|
|||||||||| ||||| | ||||||||||||||||||||||| |
|
|
| T |
2819791 |
cttcttcaaacctagtatttctctcagttctcactctaagtc |
2819832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 133 - 282
Target Start/End: Original strand, 28535356 - 28535502
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28535356 |
acaaatcacaattcacaatctcctttcttctcacaacaaacaaacagacctctc---cttccactctcatcagtcagcagcatcattttctctcttcact |
28535452 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaagcca |
282 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
28535453 |
ccttcttcaaatctagtgtatctctcaattctcactctaagtctaagcca |
28535502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 11463789 - 11463695
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactccttcttcaaatctagtgta |
252 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
11463789 |
tcttctcacaacaaacaaacaaacctctccttcttccactctcagcagtcagcagcatcattttctctcttcactccttcttcaaatctagtgta |
11463695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 45483642 - 45483714
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
45483642 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcagcaacataattttctctcttcactc |
45483714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 109; Significance: 7e-55; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 133 - 279
Target Start/End: Original strand, 26555669 - 26555812
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
26555669 |
acaaatcacaattcacaatcttctttcttctcacaacaaacaaacaaacctctc---cttccactctcatcagtcagcatcatcattttctctcttcact |
26555765 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaag |
279 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26555766 |
ccttcttcaattctagtgtatctctcaattctcactctaagtctaag |
26555812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 133 - 282
Target Start/End: Original strand, 52118488 - 52118634
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| || ||||| ||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||| ||| |
|
|
| T |
52118488 |
acaaatcacaattcacaatctcctttcctctcacaacaaacaaacaaacatctc---cttccactctcgtcggtcagcagcatcattttctctcttcact |
52118584 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactctaagtctaagcca |
282 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
52118585 |
ccttcttcaattctagtgtatctctcaattctcactctaagtttaagcca |
52118634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 26905816 - 26905744
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
26905816 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcagcaacataattttctctcttcactc |
26905744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 36615224 - 36615296
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
36615224 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcagcaacataattttctctcttcactc |
36615296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 25069519 - 25069591
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||||| |||| |
|
|
| T |
25069519 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcaacaacataattttctctcttcactc |
25069591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 28211535 - 28211463
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||| |||||||| ||| |||||||||||| |||| |
|
|
| T |
28211535 |
tcttcttacaacaaacaaacaaacatctc---cttccactctcataagtcagcaacataattttctctcttcactc |
28211463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 2125523 - 2125573
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagca |
211 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2125523 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcagca |
2125573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 105; Significance: 2e-52; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 16693162 - 16693297
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
16693162 |
acaaatcacaattcacaatctcctttcttctcacaacaaacaaacaaacctctc---cttccactctcatcagtcagcagcatcattttctctcttcact |
16693258 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtgtatctctcagttctcactcta |
271 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16693259 |
ccttcttcaaatctagtgtatctctcaattctcactcta |
16693297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 5014005 - 5013888
Alignment:
| Q |
133 |
acaaatcacaattcacagtcgtctttcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaact |
232 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| ||| |
|
|
| T |
5014005 |
acaaatcacaattcacaatcgtctttcttctcacaacaaacaaacaaacctcttcttcttccactctcatcagtcagcaacatcattttctatcttcact |
5013906 |
T |
 |
| Q |
233 |
ccttcttcaaatctagtg |
250 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
5013905 |
ccttcttcaaatctagtg |
5013888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 18819578 - 18819506
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
18819578 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcagtcagcaacataattttctctcttcactc |
18819506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 24904484 - 24904412
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||| |||||||||||| |||| |
|
|
| T |
24904484 |
tcttcttacaacaaacaaacaaacctctc---cttccactctcatcaatcagcaacataattttctctcttcactc |
24904412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 8903451 - 8903575
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactccttcttcaaatctagtgtatctct |
257 |
Q |
| |
|
||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8903451 |
tcttctcacaacaaataaacaaatctctccttcttccactctcagcagtcagcagcatcattttctctcttcactccttcttcaaatctagtgtatctct |
8903550 |
T |
 |
| Q |
258 |
cagttctcactctaagtctaagcca |
282 |
Q |
| |
|
||||||||||||||||| ||||||| |
|
|
| T |
8903551 |
cagttctcactctaagtgtaagcca |
8903575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 45067632 - 45067508
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactccttcttcaaatctagtgtatctct |
257 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||||||||||||||| |
|
|
| T |
45067632 |
tcttctcacaacaagcaaacaaacctctccttcttccactctcagcagtcagcaacatcattttctctcgtcactcctttttcaaatctagtgtatctct |
45067533 |
T |
 |
| Q |
258 |
cagttctcactctaagtctaagcca |
282 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
45067532 |
cagttctcactctaagtctaagcca |
45067508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 97; Significance: 1e-47; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 174 - 282
Target Start/End: Complemental strand, 424647 - 424539
Alignment:
| Q |
174 |
aaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactccttcttcaaatctagtgtatctctcagttctcactctaag |
273 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
424647 |
aaacaaacctctccttcttccactctcagcagtcagcagcatcattttctctcttcactccttcttcaaatctagtgtatctctcagttctcactctaag |
424548 |
T |
 |
| Q |
274 |
tctaagcca |
282 |
Q |
| |
|
||||||||| |
|
|
| T |
424547 |
tctaagcca |
424539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 174 - 279
Target Start/End: Complemental strand, 18113642 - 18113537
Alignment:
| Q |
174 |
aaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactccttcttcaaatctagtgtatctctcagttctcactctaag |
273 |
Q |
| |
|
||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18113642 |
aaacaaacctctccttcttcccctctcagcagtcagcaacatcattttctctcttcactccttcttcaaatctagtgtatctctcagttctcactctaag |
18113543 |
T |
 |
| Q |
274 |
tctaag |
279 |
Q |
| |
|
|||||| |
|
|
| T |
18113542 |
tctaag |
18113537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 17074816 - 17074885
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctct |
227 |
Q |
| |
|
|||||||||||||| |||||| ||||||| ||||||||||| || |||||| || ||||||||||||||| |
|
|
| T |
17074816 |
tcttctcacaacaaccaaacatacctctccttcttccactcccagcagtcaacaacatcattttctctct |
17074885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 25634296 - 25634224
Alignment:
| Q |
158 |
tcttctcacaacaaacaaacaaacctctcattcttccactctcatcagtcagcagcatcattttctctcttaactc |
233 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||| |||| |
|
|
| T |
25634296 |
tcttcttacaacaaacaaacaaacctctctttc---cactctcatcagtcagcaacataattttctctcttcactc |
25634224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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