View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16770_low_12 (Length: 266)

Name: NF16770_low_12
Description: NF16770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16770_low_12
NF16770_low_12
[»] chr1 (15 HSPs)
chr1 (103-250)||(34502560-34502710)
chr1 (1-100)||(35907534-35907637)
chr1 (1-99)||(41972357-41972458)
chr1 (1-100)||(7433427-7433530)
chr1 (1-99)||(17445296-17445398)
chr1 (107-183)||(34513320-34513396)
chr1 (1-100)||(26144237-26144340)
chr1 (1-99)||(3828967-3829069)
chr1 (1-99)||(42311023-42311125)
chr1 (1-82)||(32982138-32982223)
chr1 (53-99)||(44352621-44352667)
chr1 (1-99)||(321459-321561)
chr1 (54-99)||(31866960-31867005)
chr1 (1-99)||(33489670-33489772)
chr1 (216-250)||(34513243-34513277)
[»] chr4 (38 HSPs)
chr4 (1-100)||(43143666-43143769)
chr4 (1-99)||(6690317-6690419)
chr4 (1-99)||(30216824-30216926)
chr4 (1-96)||(42333858-42333957)
chr4 (1-99)||(50205159-50205261)
chr4 (2-99)||(10352967-10353068)
chr4 (1-99)||(3292978-3293080)
chr4 (1-100)||(20129292-20129395)
chr4 (1-100)||(26439361-26439464)
chr4 (1-100)||(34407366-34407469)
chr4 (2-82)||(36382428-36382512)
chr4 (1-100)||(25930690-25930793)
chr4 (1-99)||(45194159-45194261)
chr4 (1-56)||(44156681-44156736)
chr4 (1-100)||(43355886-43355989)
chr4 (1-57)||(17511316-17511372)
chr4 (1-99)||(27363344-27363446)
chr4 (23-100)||(47500755-47500836)
chr4 (53-100)||(7769310-7769357)
chr4 (1-93)||(30109945-30110041)
chr4 (1-100)||(13012170-13012273)
chr4 (53-99)||(49908790-49908836)
chr4 (1-99)||(26448036-26448138)
chr4 (1-99)||(28877332-28877434)
chr4 (1-99)||(29996065-29996167)
chr4 (1-99)||(30077713-30077814)
chr4 (1-99)||(48989311-48989413)
chr4 (1-57)||(6254573-6254629)
chr4 (1-57)||(29319787-29319843)
chr4 (53-99)||(5517502-5517548)
chr4 (53-99)||(6212036-6212082)
chr4 (53-99)||(17554979-17555025)
chr4 (1-57)||(35545982-35546038)
chr4 (1-57)||(48129995-48130051)
chr4 (56-98)||(50720487-50720529)
chr4 (56-99)||(13393011-13393054)
chr4 (56-99)||(13396150-13396193)
chr4 (1-57)||(40529044-40529100)
[»] chr8 (14 HSPs)
chr8 (1-100)||(34136907-34137010)
chr8 (1-99)||(23402091-23402193)
chr8 (1-96)||(4403994-4404093)
chr8 (1-84)||(16788107-16788194)
chr8 (1-95)||(36408538-36408636)
chr8 (2-82)||(15838286-15838370)
chr8 (1-55)||(9877251-9877305)
chr8 (1-99)||(2729278-2729380)
chr8 (1-81)||(39914516-39914600)
chr8 (1-99)||(29728468-29728570)
chr8 (1-57)||(3435298-3435354)
chr8 (1-57)||(3648876-3648932)
chr8 (1-57)||(40470575-40470631)
chr8 (1-95)||(10397122-10397220)
[»] chr3 (19 HSPs)
chr3 (1-100)||(11018294-11018397)
chr3 (1-100)||(6503651-6503754)
chr3 (1-99)||(45182964-45183066)
chr3 (1-99)||(33040936-33041038)
chr3 (1-99)||(6930976-6931078)
chr3 (1-100)||(39771772-39771875)
chr3 (1-99)||(19565583-19565685)
chr3 (1-99)||(45335858-45335959)
chr3 (1-82)||(19390146-19390231)
chr3 (1-81)||(22968526-22968610)
chr3 (1-57)||(6269508-6269564)
chr3 (1-82)||(34084204-34084289)
chr3 (1-100)||(27935160-27935263)
chr3 (53-99)||(5354692-5354738)
chr3 (53-99)||(6890981-6891027)
chr3 (10-99)||(35514249-35514342)
chr3 (1-57)||(5135298-5135354)
chr3 (29-98)||(22922141-22922214)
chr3 (1-57)||(40081822-40081877)
[»] chr2 (21 HSPs)
chr2 (1-99)||(8147334-8147436)
chr2 (1-99)||(45418566-45418668)
chr2 (1-99)||(8059415-8059517)
chr2 (1-107)||(42439961-42440071)
chr2 (1-99)||(44084685-44084787)
chr2 (1-79)||(41251716-41251798)
chr2 (1-100)||(6403886-6403989)
chr2 (1-84)||(26237955-26238041)
chr2 (1-99)||(770977-771084)
chr2 (3-100)||(2958185-2958285)
chr2 (1-76)||(18981622-18981701)
chr2 (1-100)||(35962697-35962800)
chr2 (1-57)||(12756919-12756975)
chr2 (1-82)||(32127223-32127308)
chr2 (1-100)||(17445123-17445224)
chr2 (53-99)||(34523223-34523269)
chr2 (1-79)||(16405603-16405685)
chr2 (1-82)||(31581704-31581789)
chr2 (1-57)||(26162781-26162837)
chr2 (10-73)||(7072643-7072710)
chr2 (1-57)||(4555293-4555349)
[»] chr7 (17 HSPs)
chr7 (1-100)||(34389138-34389241)
chr7 (1-99)||(37002226-37002328)
chr7 (1-99)||(26624728-26624831)
chr7 (1-100)||(5555469-5555572)
chr7 (1-99)||(8867813-8867915)
chr7 (1-99)||(33685547-33685649)
chr7 (2-82)||(8394125-8394209)
chr7 (1-73)||(35090177-35090253)
chr7 (1-100)||(3114178-3114281)
chr7 (1-99)||(7002708-7002810)
chr7 (1-99)||(7048579-7048681)
chr7 (1-82)||(36630816-36630901)
chr7 (1-81)||(14777189-14777273)
chr7 (1-55)||(38638318-38638372)
chr7 (1-99)||(43184550-43184652)
chr7 (1-57)||(40920085-40920141)
chr7 (1-57)||(36658210-36658266)
[»] chr5 (21 HSPs)
chr5 (1-100)||(37254623-37254726)
chr5 (1-99)||(17332633-17332735)
chr5 (1-99)||(31501798-31501900)
chr5 (1-99)||(31680350-31680452)
chr5 (1-99)||(12278942-12279044)
chr5 (1-99)||(13817960-13818062)
chr5 (1-99)||(10033910-10034012)
chr5 (2-100)||(39434678-39434780)
chr5 (1-100)||(26283400-26283503)
chr5 (1-57)||(33430350-33430406)
chr5 (1-80)||(1776458-1776541)
chr5 (1-100)||(36293703-36293806)
chr5 (1-82)||(3155713-3155798)
chr5 (1-57)||(16155026-16155082)
chr5 (1-57)||(19985968-19986024)
chr5 (1-56)||(16333958-16334013)
chr5 (53-99)||(26543903-26543949)
chr5 (1-55)||(39657588-39657642)
chr5 (1-99)||(36291354-36291456)
chr5 (1-54)||(43068909-43068962)
chr5 (1-57)||(28801316-28801372)
[»] chr6 (13 HSPs)
chr6 (1-99)||(28996713-28996815)
chr6 (1-82)||(18339106-18339191)
chr6 (1-100)||(34948840-34948943)
chr6 (5-99)||(29743266-29743364)
chr6 (1-98)||(24697899-24698000)
chr6 (1-100)||(398599-398702)
chr6 (53-99)||(13647000-13647046)
chr6 (1-96)||(31028446-31028545)
chr6 (1-100)||(13837803-13837906)
chr6 (53-99)||(34385526-34385572)
chr6 (1-57)||(24695516-24695572)
chr6 (1-57)||(33229418-33229474)
chr6 (56-96)||(2753336-2753376)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-99)||(31463-31565)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-82)||(5230-5315)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-100)||(17824-17927)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-100)||(480539-480642)
[»] scaffold2142 (1 HSPs)
scaffold2142 (1-100)||(504-607)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-57)||(52954-53010)
[»] scaffold0769 (1 HSPs)
scaffold0769 (53-99)||(1260-1306)
[»] scaffold0012 (1 HSPs)
scaffold0012 (53-89)||(194021-194057)


Alignment Details
Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 103 - 250
Target Start/End: Complemental strand, 34502710 - 34502560
Alignment:
Q  103 tatattgctcaatttgatcttattagaagagaatctaagaaaatggtgccaacgtttacgagtgagaggcggaa---gaagaaggataaactcagtgaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||   |||||||||||||| ||||||||    
T  34502710 tatattgctcaatttgatcttattagaagagaatctaagaaaatggcgccaacgtttacgagtgagaggctgaagatgaagaaggataaacacagtgaat 34502611  T
Q  200 tgcctcnnnnnnntatataatgtcatttatgatgataaaagacgtggttaa 250  Q
    ||||||       ||||||||||||||||||||||||||||||||||||||    
T  34502610 tgcctcaaaaaaatatataatgtcatttatgatgataaaagacgtggttaa 34502560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35907637 - 35907534
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||    |||||||||||||||||| ||||||||| |||||||||||    
T  35907637 tttttgtaagtgtactaattggcttttgggttgggtctaatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgccgggcggtgaaaccg 35907538  T
Q  97 ccca 100  Q
    ||||    
T  35907537 ccca 35907534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41972357 - 41972458
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcgagc---ccgggcgaccgcccggggtcgccggacggtgaaaccgc 97  Q
    ||||||||||||||||||| | ||||| |||||  |||||||||||||||||||||| |   || ||||||||||||||||||| |||||||| ||||||    
T  41972357 tttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcgatcgagccaggcgaccgcccggggtcgctggacggtggaaccgc 41972456  T
Q  98 cc 99  Q
    ||    
T  41972457 cc 41972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 7433530 - 7433427
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||    ||||||| |||||||||||||||||| |||  |||||  |||||    
T  7433530 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccg 7433431  T
Q  97 ccca 100  Q
    ||||    
T  7433430 ccca 7433427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 17445398 - 17445296
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||||||||||||||||||||||  |||||||| ||||||||    ||| |||||||||||||||  ||||||||||| |  ||||||||    
T  17445398 tttttgtaagtgtgttaattgacttttgggttggatctaatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgccgggcaatgaaaccg 17445299  T
Q  97 ccc 99  Q
    |||    
T  17445298 ccc 17445296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 34513396 - 34513320
Alignment:
Q  107 ttgctcaatttgatcttattagaagagaatctaagaaaatggtgccaacgtttacgagtgagaggcggaagaagaag 183  Q
    ||||| |||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  34513396 ttgctaaatttgatcttactacaagagaatctaagaaaatggcgccaacgttaacgagtgagaggctgaagatgaag 34513320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 26144340 - 26144237
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||   ||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||   |||||| |||||    
T  26144340 tttttataaatgtgttaatgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 26144241  T
Q  97 ccca 100  Q
    ||||    
T  26144240 ccca 26144237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3829069 - 3828967
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||||||||  |||||||||||| || ||||||||||||||||    |||| |||| ||||||| ||||||| |||||  | ||||||||    
T  3829069 tttttgtaagtgtgttaatgaacttttgggttgggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggttgccgggtgatgaaaccg 3828970  T
Q  97 ccc 99  Q
    |||    
T  3828969 ccc 3828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42311023 - 42311125
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||  | ||||||||||||||||||||||||||||||    ||||||||||||||| || | |||||||||  |||||  |||||    
T  42311023 tttttgtaaatgtgttaacgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccg 42311122  T
Q  97 ccc 99  Q
    |||    
T  42311123 ccc 42311125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32982138 - 32982223
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||| | ||||||| | ||||| ||||| |||||||||||||||||||||||    ||||| |||||||||||||||||||    
T  32982138 tttttgtaaatatgttaatgggcttttaggttgggtctaatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgcc 32982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 44352621 - 44352667
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  44352621 atcgagcccgggcgacctcccggggtcgccggatggtgaaaccgccc 44352667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 321459 - 321561
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| |||||||||||||  |||||||  ||||||||    ||||||||||| ||||||||||   |||||||  ||||||||||    
T  321459 tttttgtaactgtgttaatggacttttgggttggatctaatgcacaaaaattatcgatcgagcccggacgaccgcccgaaatcgccgggtggtgaaaccg 321558  T
Q  97 ccc 99  Q
    |||    
T  321559 ccc 321561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 31867005 - 31866960
Alignment:
Q  54 tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||    
T  31867005 tcgaacccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 31866960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33489772 - 33489670
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||| |||||||||||||| | ||||| | ||||||||||||| ||||||||||||    | ||||  |||||| |||||||||||||  ||||||||||    
T  33489772 ttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcgaacaatcccgaacgaccgtccggggtcgccgggtggtgaaaccg 33489673  T
Q  97 ccc 99  Q
    |||    
T  33489672 ccc 33489670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 34513277 - 34513243
Alignment:
Q  216 ataatgtcatttatgatgataaaagacgtggttaa 250  Q
    ||||||||||||||||||| |||||||||||||||    
T  34513277 ataatgtcatttatgatgaaaaaagacgtggttaa 34513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 5e-37; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 43143666 - 43143769
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||| |||||||||||||||    
T  43143666 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcggacggtgaaaccg 43143765  T
Q  97 ccca 100  Q
    ||||    
T  43143766 ccca 43143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6690317 - 6690419
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||    |||||||||||||||||||||||||||||||| |||||||||||    
T  6690317 tttttgtaagtgtgttaattggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccg 6690416  T
Q  97 ccc 99  Q
    |||    
T  6690417 ccc 6690419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30216824 - 30216926
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||| |||    
T  30216824 tttttgtaagtgtgttaattagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaatccg 30216923  T
Q  97 ccc 99  Q
    |||    
T  30216924 ccc 30216926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 42333858 - 42333957
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    |||||||| |||||||||||| |||| ||||||||||||||    
T  42333858 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgctggacggtgaaaccg 42333957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 50205159 - 50205261
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||    ||||||| |||||||||||||||| |||||||||||||||||||    
T  50205159 tttttgtaagtgtgttaattggcttttgggttggatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgccggacggtgaaaccg 50205258  T
Q  97 ccc 99  Q
    |||    
T  50205259 ccc 50205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 10352967 - 10353068
Alignment:
Q  2 ttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccgc 97  Q
    |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||    ||||||||||||||||| ||||||||||||||||||||||||    
T  10352967 ttttgtaaatgtgttaatggactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgc 10353066  T
Q  98 cc 99  Q
    ||    
T  10353067 cc 10353068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3292978 - 3293080
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||    ||||||||||||||||||||||||||| | || |||||||||||    
T  3292978 tttttgtaagtgtgttaattggcttttgggttgggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtcactgggcggtgaaaccg 3293077  T
Q  97 ccc 99  Q
    |||    
T  3293078 ccc 3293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 20129395 - 20129292
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||   |||||| |||||    
T  20129395 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 20129296  T
Q  97 ccca 100  Q
    ||||    
T  20129295 ccca 20129292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26439361 - 26439464
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattat----cgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||   |||||| |||||    
T  26439361 tttttataaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccg 26439460  T
Q  97 ccca 100  Q
    ||||    
T  26439461 ccca 26439464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34407366 - 34407469
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattat----cgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||   |||||| |||||    
T  34407366 tttttataaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccg 34407465  T
Q  97 ccca 100  Q
    ||||    
T  34407466 ccca 34407469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 36382428 - 36382512
Alignment:
Q  2 ttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    |||||||| ||||||||| ||||||| |||||||| |||||||||||||||    ||||||||||||||||||||||||||||||    
T  36382428 ttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgcc 36382512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 25930793 - 25930690
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||||||| |||||||||||||||    ||||||||||||||||||||| ||||||||  |||||  |||||    
T  25930793 tttttgtaaatgtgttaatgggcttttgggttgagtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccg 25930694  T
Q  97 ccca 100  Q
    ||||    
T  25930693 ccca 25930690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45194261 - 45194159
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||||    |||||| |||||| | |||| ||||||| ||| ||||||||| |    
T  45194261 tttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcgtcgggcggtgaaactg 45194162  T
Q  97 ccc 99  Q
    |||    
T  45194161 ccc 45194159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44156736 - 44156681
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg 56  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  44156736 tttttgtaagtgtgttaattggcttttgggttgggtctaatgtgcaaaaattatcg 44156681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 43355989 - 43355886
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattat----cgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||    |||||||||||||| ||| ||||||||   |||||| |||||    
T  43355989 tttttataaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccg 43355890  T
Q  97 ccca 100  Q
    ||||    
T  43355889 ccca 43355886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17511316 - 17511372
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  17511316 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcga 17511372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27363446 - 27363344
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaa--tt--atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| | ||||||||||| | ||||| ||||||||  ||  |||||||||||||||||||||| |||||||  ||||| ||||||    
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  97 ccc 99  Q
    |||    
T  27363346 ccc 27363344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 47500836 - 47500755
Alignment:
Q  23 cttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccgccca 100  Q
    ||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||||||   |||||| |||||||||    
T  47500836 ctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgccca 47500755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 7769357 - 7769310
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccca 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  7769357 atcgagcccgggcgaccgcctggggtcgccggacggtgaaaccgccca 7769310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30110041 - 30109945
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaa 93  Q
    ||||||||||||||||||| | |||| || ||| |||||||||||||||||||    ||||| ||||||||||| ||||||||| ||| ||||||||    
T  30110041 tttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgtccggggtcgtcgggcggtgaaa 30109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13012273 - 13012170
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||   ||||| |||||| ||||||||||||||||||||||    ||||||||||||||||||||||||   |||||| |||||    
T  13012273 tttttataaatgtgttaatgagctttttggttgaatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 13012174  T
Q  97 ccca 100  Q
    ||||    
T  13012173 ccca 13012170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 49908790 - 49908836
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  49908790 atcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 49908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26448138 - 26448036
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| ||||||||||||   | ||||||||||||||||    ||||| |||| ||| ||| ||| |||||||| |||||||||||    
T  26448138 tttttgtaagtgtgttaatggacttttgggttagatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgccgggcggtgaaaccg 26448039  T
Q  97 ccc 99  Q
    |||    
T  26448038 ccc 26448036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28877332 - 28877434
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| |||| |||||||||  ||||| |||||| |||||||||||||||||||||    |||||  |||||||| |||||||  |||||||||||||||    
T  28877332 tttttataagcgtgttaattagcttttaggttgaatctaatgtgcaaaaattatcgatctagcccaagcgaccgcacggggtcatcggacggtgaaaccg 28877431  T
Q  97 ccc 99  Q
    |||    
T  28877432 ccc 28877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29996065 - 29996167
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||| |||| ||||||||| ||||||| ||||||||||||||| ||||||||    |||||| |||| |||||| ||||| ||| ||| |||||||||||    
T  29996065 ttttcgtaaatgtgttaatggactttttggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgtccgggatcgtcgggcggtgaaaccg 29996164  T
Q  97 ccc 99  Q
    |||    
T  29996165 ccc 29996167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30077713 - 30077814
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| |||||||||  |||||| ||||| ||||||||||||||| |||||    ||||| ||||||||||||| ||||| ||| |||||||||||    
T  30077713 tttttgtaaatgtgttaatgaactttttggttgggtctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcg-cgggcggtgaaaccg 30077811  T
Q  97 ccc 99  Q
    |||    
T  30077812 ccc 30077814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 48989413 - 48989311
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| |||||||| |||| || ||||||||||||||||    |||| |||||  |||||||||| |||| ||| ||||||||| |    
T  48989413 tttttgtaagtgtgttaatggacttttgagttgggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcgtcgggcggtgaaactg 48989314  T
Q  97 ccc 99  Q
    |||    
T  48989313 ccc 48989311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6254629 - 6254573
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    |||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  6254629 tttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcga 6254573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29319787 - 29319843
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  29319787 tttttgtaaatgtgttaatgggattttgggttgagtctaatgtgcaaaaattatcga 29319843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 5517502 - 5517548
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  5517502 atcgagcccaggcgaccgcccggggtcgccgggcggtgaaaccgccc 5517548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 6212036 - 6212082
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6212036 atcgagctcgggcgaccgcccgaggtcgccggacggtgaaaccgccc 6212082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 17555025 - 17554979
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  17555025 atcgagcccgggcgaccacccggggtcgtcggacggtgaaaccgccc 17554979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 35546038 - 35545982
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||||| ||||||||||| |||| ||| ||||||||| ||||    
T  35546038 tttttgtaagtgtgttaattggcttttgggttgggtctgatgcgcaaaaattgtcga 35545982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48130051 - 48129995
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    |||||||||||||||||||   ||||||||||| ||||||| |||||||||||||||    
T  48130051 tttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcga 48129995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 50720487 - 50720529
Alignment:
Q  56 gagcccgggcgaccgcccggggtcgccggacggtgaaaccgcc 98  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  50720487 gagcccgggcgaccgcccgaggtcgccgggcggtgaaaccgcc 50720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 13393011 - 13393054
Alignment:
Q  56 gagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||||||||| |||||||||| || ||||||||||||||    
T  13393011 gagcccgggcgaccgtccggggtcgctgggcggtgaaaccgccc 13393054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 13396150 - 13396193
Alignment:
Q  56 gagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||||||||| |||||||||| || ||||||||||||||    
T  13396150 gagcccgggcgaccgtccggggtcgctgggcggtgaaaccgccc 13396193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40529100 - 40529044
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| |||||||||    |||| |||||||| ||||||||||||||||||||    
T  40529100 tttttgtaaatgtgttaatgagtttttaggttgagtttaatgtgcaaaaattatcga 40529044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34136907 - 34137010
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||| |||||||||| ||||||||||||     
T  34136907 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggtgaaacca 34137006  T
Q  97 ccca 100  Q
    ||||    
T  34137007 ccca 34137010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 23402193 - 23402091
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||    ||||||||||||||||||||||||||| |||||||||||    
T  23402193 tttttgtaagtgtgttaattggcttttgggttgggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccg 23402094  T
Q  97 ccc 99  Q
    |||    
T  23402093 ccc 23402091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4404093 - 4403994
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||    ||||||||||||||||||| ||||||||||| | |||||||||    
T  4404093 tttttgtaagtatgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgccggccagtgaaaccg 4403994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 16788107 - 16788194
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccgg 84  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||| |||||    
T  16788107 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggttgccgg 16788194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36408636 - 36408538
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaacc 95  Q
    ||||||||| ||||||||| |||||||||||||  ||||||||||||||||||    ||||||||||||||||||||| ||||||||| ||||||||||    
T  36408636 tttttgtaaatgtgttaatggacttttgggttggatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgccgggcggtgaaacc 36408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 15838370 - 15838286
Alignment:
Q  2 ttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    |||||||| ||||||||| ||||||| |||||||| |||||||||||||||    |||||||||||| |||||||||||||||||    
T  15838370 ttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgcc 15838286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9877305 - 9877251
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc 55  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  9877305 tttttgtaagtgtgttaattgacttttgggttaggtctaatgtgcaaaaattatc 9877251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 2729278 - 2729380
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||||||||||||| | ||||||| |||  | ||||||| |||||||||||    |||||||||| ||||||||||||||||| |||||||||||    
T  2729278 tttttataagtgtgttaatgggcttttggattggatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgccgggcggtgaaaccg 2729377  T
Q  97 ccc 99  Q
    |||    
T  2729378 ccc 2729380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 39914600 - 39914516
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgc 81  Q
    ||||| ||| |||||||||   ||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||    
T  39914600 tttttataaatgtgttaatgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgc 39914516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29728468 - 29728570
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| |||||||||   ||||||||||||||||||||||||||| ||    ||||||| |||||||||| |||||||||||  |||||  |||||    
T  29728468 tttttgtaaatgtgttaatgagcttttgggttgagtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccg 29728567  T
Q  97 ccc 99  Q
    |||    
T  29728568 ccc 29728570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3435354 - 3435298
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||| |  |||||||||| |||||||||||||||||||||||    
T  3435354 tttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcga 3435298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3648876 - 3648932
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||    
T  3648876 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgaaaaaattatcga 3648932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40470575 - 40470631
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||| ||||||||||||| ||||||||  ||| |||||||||||||||||||||||    
T  40470575 tttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcga 40470631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10397122 - 10397220
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaacc 95  Q
    ||||| ||| ||||||||| | ||||||||||||  |||||||| | ||||||||    ||||||||||||  |||||| |||||||| ||||| ||||    
T  10397122 tttttttaactgtgttaatcggcttttgggttgaacctaatgtgaagaaattatcgattgagcccgggcgagtgcccggagtcgccgggcggtgtaacc 10397220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 11018294 - 11018397
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||| |||||||||||||| ||||||||||||||||||||    
T  11018294 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaaccg 11018393  T
Q  97 ccca 100  Q
    ||||    
T  11018394 ccca 11018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6503651 - 6503754
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaat----tatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||     ||||||||||||||||||||||||||||||||||||||||||||    
T  6503651 tttttgtaagtgtgctaattggcttttgggttgagtctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 6503750  T
Q  97 ccca 100  Q
    ||||    
T  6503751 ccca 6503754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45183066 - 45182964
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||    ||||||||||||||||||||||||||||||| |||||||||||    
T  45183066 tttttgtaagtgtgttaattggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccg 45182967  T
Q  97 ccc 99  Q
    |||    
T  45182966 ccc 45182964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33041038 - 33040936
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||    ||||||| ||||||||||||||||||||| |||||||||||    
T  33041038 tttttgtaagtgtgttaattagcttttgggttgggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgccgggcggtgaaaccg 33040939  T
Q  97 ccc 99  Q
    |||    
T  33040938 ccc 33040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6930976 - 6931078
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||||| |||||||||||  ||||||| |||||||||||||    |||||||||||||| ||||||||||||| |||||||||||    
T  6930976 tttttgtaaatgtgttaattggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccgggcggtgaaaccg 6931075  T
Q  97 ccc 99  Q
    |||    
T  6931076 ccc 6931078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 39771875 - 39771772
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattat----cgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| ||||||||| | ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||   |||||| |||||    
T  39771875 tttttataaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccg 39771776  T
Q  97 ccca 100  Q
    ||||    
T  39771775 ccca 39771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 19565583 - 19565685
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcgag----cccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| || |||| ||||| |||||||||||||||||||||||     |||||||||||||||||| ||||||| |||||||||||    
T  19565583 tttttgtaaatgtgttaatggattttttggttgggtctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgccgggcggtgaaaccg 19565682  T
Q  97 ccc 99  Q
    |||    
T  19565683 ccc 19565685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45335959 - 45335858
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| ||||||| ||||| |||||||||| ||||||||||||    | ||||||||||||||| ||||||||| |||||||||||    
T  45335959 tttttgtaaatgtgttaat-gactttttggttgggtctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgccgggcggtgaaaccg 45335861  T
Q  97 ccc 99  Q
    |||    
T  45335860 ccc 45335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19390231 - 19390146
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    |||| ||||| ||||||||||||||||||    
T  19390231 tttttgtaaatgtgttaatagacttttaggttgagtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgcc 19390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22968526 - 22968610
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgc 81  Q
    ||||||||| ||||||||| | |||||||||| |||||||||||||||||||    ||||||||||| |||||||||||||||||    
T  22968526 tttttgtaaatgtgttaatgggcttttgggttaagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgc 22968610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6269508 - 6269564
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  6269508 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcga 6269564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34084204 - 34084289
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||| ||||||||| ||||||| |||||| | |||||||||||||||    |||||| |||||||||||||||||||||||    
T  34084204 tttttgtaaatgtgttaatggactttttggttgaatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgcc 34084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 27935263 - 27935160
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||||||||   ||||||||||| || ||||||||||||||||    ||||||||||||||| |||| |||| ||| | ||||||||||     
T  27935263 tttttgtaagtgtgttaatgagcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgccaggcggtgaaacca 27935164  T
Q  97 ccca 100  Q
    ||||    
T  27935163 ccca 27935160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 5354738 - 5354692
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  5354738 atcgagcccgggcgaccgcccggggtcgccgggcggtgaaactgccc 5354692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 6891027 - 6890981
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6891027 atcgagcccgggcgaccgcccggtgtcgccgggcggtgaaaccgccc 6890981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 35514342 - 35514249
Alignment:
Q  10 gtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||||| |||||||||||||  |||| | ||| |||||||||||    |||||| |||||| ||||||||||||| ||||||||| ||||    
T  35514342 gtgtgttaatggacttttgggttggatctagtatgcgaaaattatcgatcgagcccggacgaccgtccggggtcgccgggcggtgaaactgccc 35514249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5135354 - 5135298
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    |||||||||||||||||||   ||||| ||||| ||||||||| ||||||| |||||    
T  5135354 tttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcga 5135298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 22922214 - 22922141
Alignment:
Q  29 ggttgagtctaatgtgcaaaaat----tatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcc 98  Q
    |||||||| ||||||||||||||     |||||||||| ||||||||||||| |||||  |||||| |||||||    
T  22922214 ggttgagtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgcc 22922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40081822 - 40081877
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| |||||||||   ||||||| ||||||||||||| |||||||||||||    
T  40081822 tttttgtaaatgtgttaatgagcttttgg-ttgagtctaatgttcaaaaattatcga 40081877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 8147436 - 8147334
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||    |||||||||||||||||||||||||||||||| |||||||||||    
T  8147436 tttttgtaagtgtgttaattgacttttgagttgggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccg 8147337  T
Q  97 ccc 99  Q
    |||    
T  8147336 ccc 8147334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 45418668 - 45418566
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||    ||||||||||||||||||||||||||| |||||||||||    
T  45418668 tttttgtaagtgtgttaattggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccg 45418569  T
Q  97 ccc 99  Q
    |||    
T  45418568 ccc 45418566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8059415 - 8059517
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    ||||| |||||| || ||||||||| ||| |||||||||||    
T  8059415 tttttgtaagtgtgttaattggcttttgggttgactctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcgtcgggcggtgaaaccg 8059514  T
Q  97 ccc 99  Q
    |||    
T  8059515 ccc 8059517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 42440071 - 42439961
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||| ||||||||||||||||||||    |||||||||||||||||||||||||||||  |||||  |||||    
T  42440071 tttttgtaaatgtgttaatgggcttttgggtttagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccg 42439972  T
Q  97 cccacgtatat 107  Q
    |||| ||||||    
T  42439971 cccatgtatat 42439961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 44084685 - 44084787
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||||||||||||||  |||||||| ||| || |||||||||||||||||||    |||||||||||| ||||||||||||||| |||||||||||    
T  44084685 tttttgtaagtgtgttaatgaacttttggattgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgccgggcggtgaaaccg 44084784  T
Q  97 ccc 99  Q
    |||    
T  44084785 ccc 44084787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41251716 - 41251798
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtc 79  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||    
T  41251716 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtc 41251798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 6403886 - 6403989
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||  |||||| ||||||||||||||||||||||||    |||||||||||||||||||||||||||||   |||||| |||||    
T  6403886 tttttataaatgtgttaatgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 6403985  T
Q  97 ccca 100  Q
    ||||    
T  6403986 ccca 6403989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 26238041 - 26237955
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt---atcgagcccgggcgaccgcccggggtcgccgg 84  Q
    ||||||||||||||||||| ||||||||| |||  |||||| |||||||||    ||||||||||||||||||||||||||||||||    
T  26238041 tttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaatatcgatcgagcccgggcgaccgcccggggtcgccgg 26237955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 771084 - 770977
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccgg-----ggtcgccggacggtga 91  Q
    ||||||||||||||||||| | ||||| ||||| ||||||||||||||| ||    |||||||||||||||||||||||     ||||||||| ||||||    
T  771084 tttttgtaagtgtgttaatgggctttttggttgggtctaatgtgcaaaagttatcgatcgagcccgggcgaccgcccgggatccggtcgccgggcggtga 770985  T
Q  92 aaccgccc 99  Q
    ||||||||    
T  770984 aaccgccc 770977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 2958185 - 2958285
Alignment:
Q  3 tttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaat---tatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||| |    ||||||||||| ||||||||||||||||||  |||||  ||||||||    
T  2958185 tttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccc 2958284  T
Q  100 a 100  Q
    |    
T  2958285 a 2958285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 18981701 - 18981622
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggg 76  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||    ||||||||||| ||||||||||||    
T  18981701 tttttgtaaatgttttaatggacttttgggttgagtctaatgtgcaaaaattatcaatcgagcccggacgaccgcccggg 18981622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 35962800 - 35962697
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| |||||||||   |||||||||||||||||||||||||||||||    |||||||||| |||||||| |||||||||  |||||  |||||    
T  35962800 tttttgtaaatgtgttaataagcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccg 35962701  T
Q  97 ccca 100  Q
    ||||    
T  35962700 ccca 35962697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12756919 - 12756975
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  12756919 tttttgtaagtgtgttaattggcttttgggttgggtctaatgcgcaaaaattatcga 12756975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32127223 - 32127308
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||| |||||||||   ||||||||| |||| |||||||||||||||    ||||||||||||||||||||||||||||||    
T  32127223 tttttgtaaatgtgttaatgagcttttgggtcgagtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 32127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 17445123 - 17445224
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||||||||||  |||||||||||    ||||||| |||||||||||||| |||||||  |||||  |||||    
T  17445123 tttttgtaaatgtgttaatgggcttttgggttgagtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccg 17445220  T
Q  97 ccca 100  Q
    ||||    
T  17445221 ccca 17445224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 34523269 - 34523223
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  34523269 atcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 34523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16405685 - 16405603
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtc 79  Q
    ||||| ||| |||||||||   |||||||||||||||||| ||||||||||||||    |||||||||||||||||| |||||    
T  16405685 tttttataaatgtgttaatgagcttttgggttgagtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtc 16405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31581704 - 31581789
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||| ||||||||| | |||||||| |||||||||| |||||||| |||||    |||| ||||||||||||| |||||||    
T  31581704 tttttgtaaatgtgttaatgggcttttgggatgagtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgcc 31581789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26162781 - 26162837
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||| |  ||||||||||| | ||||||| ||||||||||||    
T  26162781 tttttgtaagtgtgttaatgggtttttgggttgaatttaatgtgtaaaaattatcga 26162837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 7072643 - 7072710
Alignment:
Q  10 gtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgccc 73  Q
    |||||||||| | |||||||||||||| ||||||  |||||||    |||||||||||||||||||||    
T  7072643 gtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatcgatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4555293 - 4555349
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||    ||||||||||| || | ||||||||||||||||||    
T  4555293 tttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcga 4555349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34389138 - 34389241
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||    |||||||||||||||||||||||||||||||| |||||||| ||    
T  34389138 tttttgtaagtgtgttaattagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaatcg 34389237  T
Q  97 ccca 100  Q
    ||||    
T  34389238 ccca 34389241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37002226 - 37002328
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcgagc----ccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |    |||  |||||||||||||||||||| |||||||||||    
T  37002226 tttttgtaagtgtgttaattgacttttggattgggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgccgggcggtgaaaccg 37002325  T
Q  97 ccc 99  Q
    |||    
T  37002326 ccc 37002328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26624831 - 26624728
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta-----tcgagcccgggcgaccgcccggggtcgccggacggtgaaacc 95  Q
    |||||||||||||||||||| |||||||| ||| ||||||| |||||||||||     |||||||| |||||||||||||||| ||||| ||||||||||    
T  26624831 tttttgtaagtgtgttaattaacttttggattgggtctaatatgcaaaaattatcgaatcgagcccaggcgaccgcccggggttgccgggcggtgaaacc 26624732  T
Q  96 gccc 99  Q
    ||||    
T  26624731 gccc 26624728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 5555572 - 5555469
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| || |||||| | |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||  |||||  |||||    
T  5555572 tttttgtaaatgcgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccg 5555473  T
Q  97 ccca 100  Q
    ||||    
T  5555472 ccca 5555469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8867813 - 8867915
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg----agcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||| ||||||| ||||||| ||| ||||||| ||||||||||||||    |||||||||||||||||||||||||||| ||||||||| |    
T  8867813 tttttgtaaatgtattaattggcttttggattgggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaactg 8867912  T
Q  97 ccc 99  Q
    |||    
T  8867913 ccc 8867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 33685649 - 33685547
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| | ||||||||||| || ||||||||||||||||    ||||||||| ||||| ||| ||||||||||| |||||||||||    
T  33685649 tttttgtaagtgtgttaatgggcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgccgggcggtgaaaccg 33685550  T
Q  97 ccc 99  Q
    |||    
T  33685549 ccc 33685547  T

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Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 8394209 - 8394125
Alignment:
Q  2 ttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgcc 82  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||||||||||    |||||||||||||||||||||||||||||    
T  8394209 ttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8394125  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35090253 - 35090177
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgccc 73  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    |||||||||||||||||||||    
T  35090253 tttttgtaagtgtgttaattggcttttgggttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

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Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 3114178 - 3114281
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||| ||  |||||  |||||    
T  3114178 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccg 3114277  T
Q  97 ccca 100  Q
    ||||    
T  3114278 ccca 3114281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7002810 - 7002708
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaat----tatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||| |||||||||||| ||||||||||| || ||||||  ||||||     ||||||||||||||||||| |||||||||||| |||||||||||    
T  7002810 tttttgtatgtgtgttaattggcttttgggttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccg 7002711  T
Q  97 ccc 99  Q
    |||    
T  7002710 ccc 7002708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 7048681 - 7048579
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaat----tatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||||||| |||||||||||| ||||||||||| || ||||||  ||||||     ||||||||||||||||||| |||||||||||| |||||||||||    
T  7048681 tttttgtatgtgtgttaattggcttttgggttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccg 7048582  T
Q  97 ccc 99  Q
    |||    
T  7048581 ccc 7048579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 36630901 - 36630816
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||| ||||||||| ||||||| |||||||| ||||||||||||||||    ||||||||||||||||| |||||||||||    
T  36630901 tttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 36630816  T

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Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 14777189 - 14777273
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgc 81  Q
    ||||||||| |||||||||   ||||||||||||||||||||||||||||||    |||||||||||||||||||||||| ||||    
T  14777189 tttttgtaaatgtgttaatgagcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgc 14777273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38638318 - 38638372
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc 55  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  38638318 tttttgtaagtgtgttaattgacttttgggttggatctaatgtgcaaaaattatc 38638372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43184550 - 43184652
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||| ||||||||| |||||||||| ||||| ||| | |||||||    |||||||||| ||||||||||||  ||||||| |||||||||||    
T  43184550 tttttgtaagtatgttaattggcttttgggttaagtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccggaatcgccgggcggtgaaaccg 43184649  T
Q  97 ccc 99  Q
    |||    
T  43184650 ccc 43184652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40920085 - 40920141
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||    
T  40920085 tttttgtaaatgtgttaattggcttttgggttaaatctaatgtgcaaaaattatcga 40920141  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36658266 - 36658210
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||| ||| ||||||||| ||||| ||||| ||| |||||||||||||||||||    
T  36658266 tttttgttagtatgttaattggcttttcggttgggtccaatgtgcaaaaattatcga 36658210  T

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Target: chr5 (Bit Score: 67; Significance: 8e-30; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 37254726 - 37254623
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    ||||||| ||||||||||| ||||||||||  |||||||||||    
T  37254726 tttttgtaagtgtgttaattgacttttgggttgggtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccgagcggtgaaaccg 37254627  T
Q  97 ccca 100  Q
    ||||    
T  37254626 ccca 37254623  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17332633 - 17332735
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    ||||||||||||||| |||||||||||||||| |||||||||||    
T  17332633 tttttgtaagtgtgttaattggcttttgggttgggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgccgggcggtgaaaccg 17332732  T
Q  97 ccc 99  Q
    |||    
T  17332733 ccc 17332735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31501798 - 31501900
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||    ||||||||||||| | |||||||||||||||| |||||||||||    
T  31501798 tttttgtaagtgtgttaattggcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgccgggcggtgaaaccg 31501897  T
Q  97 ccc 99  Q
    |||    
T  31501898 ccc 31501900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31680452 - 31680350
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga----gcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| ||||||||||| |||||||| | ||||||||||||    ||||||||||||||||||||||||||| |||||||||||    
T  31680452 tttttgtaagtgtgttaattggcttttgggttgggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccg 31680353  T
Q  97 ccc 99  Q
    |||    
T  31680352 ccc 31680350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 12278942 - 12279044
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||||||||    |||||| ||||||||||||||||| ||||||| |||||||||||    
T  12278942 tttttgtaagtgtgttaattggcctttgggttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgccgggcggtgaaaccg 12279041  T
Q  97 ccc 99  Q
    |||    
T  12279042 ccc 12279044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13818062 - 13817960
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||    ||||||||| |||||||||||||||||||  |||||  |||||    
T  13818062 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccg 13817963  T
Q  97 ccc 99  Q
    |||    
T  13817962 ccc 13817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 10034012 - 10033910
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||    |||||||||||||| || |||||||||||  |||||  |||||    
T  10034012 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccg 10033913  T
Q  97 ccc 99  Q
    |||    
T  10033912 ccc 10033910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 39434780 - 39434678
Alignment:
Q  2 ttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgc 97  Q
    |||||||| ||||||||| | |||||||||||||||||||||| ||||||||    |||||||||||||||||||| ||||||||  |||||  ||||||    
T  39434780 ttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgc 39434681  T
Q  98 cca 100  Q
    |||    
T  39434680 cca 39434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 26283400 - 26283503
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||  |||||| ||||||||||||||||||||||||    |||||||||||||||||||||| ||||||   |||||| |||||    
T  26283400 tttttataaatgtgttaatgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccg 26283499  T
Q  97 ccca 100  Q
    ||||    
T  26283500 ccca 26283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33430406 - 33430350
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  33430406 tttttgtaagtgtgttaattggcttttgggttgggtctaatgcgcaaaaattatcga 33430350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1776458 - 1776541
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcg 80  Q
    ||||||||| ||||||||| ||||||| |||||| | |||||| ||||||||    ||||||||||||||||||||||||||||    
T  1776458 tttttgtaaatgtgttaatggactttttggttgactttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcg 1776541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 36293703 - 36293806
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||||||||    |||||| |||| ||||||| ||||||||||  |||||  |||||    
T  36293703 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccg 36293802  T
Q  97 ccca 100  Q
    ||||    
T  36293803 ccca 36293806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 3155713 - 3155798
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||| ||| ||||||||| ||||||| ||||||||| ||||||||||||||    |||||||||| ||||||||||||| |||||    
T  3155713 tttttataaatgtgttaatggacttttaggttgagtcgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgcc 3155798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16155082 - 16155026
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||| ||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  16155082 tttttataaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcga 16155026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19986024 - 19985968
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||    
T  19986024 tttttgtaaatgtgctaatggacttttgggttgaatctaatgtgcaaaaattatcga 19985968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16333958 - 16334013
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcg 56  Q
    ||||||||| ||||||||| | |||||||||||| |||||||||||||||||||||    
T  16333958 tttttgtaaatgtgttaatgggcttttgggttgaatctaatgtgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 26543903 - 26543949
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  26543903 atcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 26543949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39657588 - 39657642
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc 55  Q
    ||||||||| |||||||||   |||||||||||||||||||||||||||||||||    
T  39657588 tttttgtaaatgtgttaatgagcttttgggttgagtctaatgtgcaaaaattatc 39657642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36291456 - 36291354
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattat----cgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| |||||||||  |||||| ||||   |||||||||||||||||||    ||| ||||| ||||||||||| |||| ||| |||||||||||    
T  36291456 tttttgtaaatgtgttaatgaacttttaggttagatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcggcgggcggtgaaaccg 36291357  T
Q  97 ccc 99  Q
    |||    
T  36291356 ccc 36291354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43068962 - 43068909
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattat 54  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||    
T  43068962 tttttgtaaatgtgttaatggacttttgggttgggtctaatgtgaaaaaattat 43068909  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28801372 - 28801316
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||| | ||||||| |||  ||||||||||||||||||||||    
T  28801372 tttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcga 28801316  T

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Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28996815 - 28996713
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||    |||||| |||||||||||||||||||||||| |||||||||||    
T  28996815 tttttgtaagtgtgttaattgacttttaggttgggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgccgggcggtgaaaccg 28996716  T
Q  97 ccc 99  Q
    |||    
T  28996715 ccc 28996713  T

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Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18339191 - 18339106
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||||||||||||||| ||||| | ||| ||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  18339191 tttttgtaagtgtgttaattggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

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Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34948840 - 34948943
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||||||||    |||||||| ||||||||||| |||||||||  |||||  |||||    
T  34948840 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccg 34948939  T
Q  97 ccca 100  Q
    ||||    
T  34948940 ccca 34948943  T

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Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 29743364 - 29743266
Alignment:
Q  5 tgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||| |||||||||  |||||| ||||| |||||||||||||||||||||    |||||||||| |||||||||| ||| ||||||||||||||||||    
T  29743364 tgtaaatgtgttaatgaactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcaaccgcccgggatcgtcggacggtgaaaccgccc 29743266  T

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Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 24697899 - 24698000
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatc----gagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| | ||||||||||| | |||||||| ||||||||||    ||||||||||||  | ||||||||||||| |||||||||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgccgggcggtgaaaccg 24697998  T
Q  97 cc 98  Q
    ||    
T  24697999 cc 24698000  T

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Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 398702 - 398599
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||   ||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||   |||||| |||||    
T  398702 tttttataaatgtgttaatgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 398603  T
Q  97 ccca 100  Q
    ||||    
T  398602 ccca 398599  T

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Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 13647046 - 13647000
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||    
T  13647046 atcgagcccgggcgaccgcccggggtcgccgggtggtgaaaccgccc 13647000  T

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Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 31028446 - 31028545
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| |||||||||   ||||| |||||  |||||||||||||||||    |||||| |||||| ||||| |||||||||||| |||||||||||    
T  31028446 tttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgccgggcggtgaaaccg 31028545  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 13837906 - 13837803
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| |||||| ||   ||||||||||||||||||||| |||||||||    |||| |||| |||| ||||||||||||||  |||||  |||||    
T  13837906 tttttgtaaatgtgttgatgtgcttttgggttgagtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccg 13837807  T
Q  97 ccca 100  Q
    ||||    
T  13837806 ccca 13837803  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 34385526 - 34385572
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||||    
T  34385526 atcgagccagggcaaccgcccggggtcgccgggcggtgaaaccgccc 34385572  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24695572 - 24695516
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||||||||||||| | ||||||||||||| |||||||  |||||| |||||    
T  24695572 tttttgtaagtgtgttaatgggcttttgggttgagcctaatgttaaaaaatgatcga 24695516  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33229418 - 33229474
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    |||||| || ||||||||| ||||||||||||| ||||||||| ||||||| |||||    
T  33229418 tttttggaaatgtgttaatggacttttgggttgggtctaatgtacaaaaatgatcga 33229474  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 2753376 - 2753336
Alignment:
Q  56 gagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    |||| ||||||||||||  ||||||||||||||||||||||    
T  2753376 gagctcgggcgaccgcctagggtcgccggacggtgaaaccg 2753336  T

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Target: scaffold0154 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 31565 - 31463
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||||||||||||| | ||||||||||| ||||| |||||||||||||    ||||||||||||||||| | ||||||||||| || ||||||||    
T  31565 tttttgtaagtgtgttaatgggcttttgggttgggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgccgggcgatgaaaccg 31466  T
Q  97 ccc 99  Q
    |||    
T  31465 ccc 31463  T

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Target: scaffold0502 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 5315 - 5230
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgcc 82  Q
    ||||||||||||||||||||| ||||| | ||| ||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  5315 tttttgtaagtgtgttaattggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

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Target: scaffold0069 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 17927 - 17824
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||||||||||    |||||||||| ||| ||| ||||||||||  |||||  |||||    
T  17927 tttttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccg 17828  T
Q  97 ccca 100  Q
    ||||    
T  17827 ccca 17824  T

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Target: scaffold0002 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 480539 - 480642
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatt----atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||   ||||| ||||||||||||||||||||||||    |||||||||||||||||||||||||||||   |||||| |||||    
T  480539 tttttataaatgtgttaatgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 480638  T
Q  97 ccca 100  Q
    ||||    
T  480639 ccca 480642  T

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Target: scaffold2142 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 607 - 504
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaatta----tcgagcccgggcgaccgcccggggtcgccggacggtgaaaccg 96  Q
    ||||| ||| |||||||||   ||||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||   |||||| |||||    
T  607 tttttataaatgtgttaatgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccg 508  T
Q  97 ccca 100  Q
    ||||    
T  507 ccca 504  T

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Target: scaffold0041 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 53010 - 52954
Alignment:
Q  1 tttttgtaagtgtgttaattgacttttgggttgagtctaatgtgcaaaaattatcga 57  Q
    ||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||    
T  53010 tttttgtaaatgtgttaattggcttttgggttaaatctaatgtgcaaaaattatcga 52954  T

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Target: scaffold0769 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 1306 - 1260
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgccc 99  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  1306 atcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 1260  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 194057 - 194021
Alignment:
Q  53 atcgagcccgggcgaccgcccggggtcgccggacggt 89  Q
    |||||||||||||||||||||||||||||||| ||||    
T  194057 atcgagcccgggcgaccgcccggggtcgccgggcggt 194021  T

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