View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16771_low_7 (Length: 288)
Name: NF16771_low_7
Description: NF16771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16771_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 279
Target Start/End: Original strand, 46442185 - 46442444
Alignment:
| Q |
20 |
aaagacacttgataatgataccgccgacccacccaaaattattcaatatgaatgtcggaagatgggtgttatttttcgcattcaacaatatcttcatgaa |
119 |
Q |
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| T |
46442185 |
aaagacacttgataatgagacagccgacccacccaaaattattcaatatgaatgtcggaagatgggtgttatttttcgcattcaacaatatcttcatgaa |
46442284 |
T |
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| Q |
120 |
gaaggtttgatataataatcgatcaataatggacaatggaacaataatggacatgaagaaggtttgatataacttataagtatactggtcttgaatacga |
219 |
Q |
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| T |
46442285 |
gaaggtttgatataataatcgatcaataatggacaatggaacaataatggacatgaagaaggtttgatataacttataagtatactggtcttgaatacga |
46442384 |
T |
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| Q |
220 |
aaatgagtacatttataacgataagctcatgcttttattaagacctgcaaacagtataat |
279 |
Q |
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| T |
46442385 |
aaatgagtacatttataacgataagctcatgcttttattaagacctgcaaacagtataat |
46442444 |
T |
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