View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16772_low_25 (Length: 206)
Name: NF16772_low_25
Description: NF16772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16772_low_25 |
 | |
|
| [»] scaffold0055 (7 HSPs) |
| |
|
| [»] scaffold0052 (8 HSPs) |
| |
|
| [»] scaffold0021 (2 HSPs) |
| |
|
| [»] scaffold0515 (1 HSPs) |
| |
|
| [»] scaffold0306 (1 HSPs) |
| |
|
| [»] scaffold0152 (1 HSPs) |
| |
|
Alignment Details
Target: scaffold0055 (Bit Score: 206; Significance: 1e-113; HSPs: 7)
Name: scaffold0055
Description:
Target: scaffold0055; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 50579 - 50784
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50579 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
50678 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50679 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
50778 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
50779 |
tcaaac |
50784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 79580 - 79785
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79580 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
79679 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
79680 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
79779 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
79780 |
tcaaac |
79785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 41331 - 41536
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41331 |
cgtagtcaacgcgtgctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
41430 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41431 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
41530 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
41531 |
tcaaac |
41536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 72054 - 71849
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
72054 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgtcgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
71955 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
71954 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
71855 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
71854 |
tcaaac |
71849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 66202 - 66407
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
66202 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatcttcatcacgatgaaatttcaaagat |
66301 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
66302 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
66401 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
66402 |
tcaaac |
66407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 32032 - 32222
Alignment:
| Q |
16 |
ctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32032 |
ctgatgactcgcgcttactaggaattcctcattgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
32131 |
T |
|
| Q |
116 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32132 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
32222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0055; HSP #7
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 55 - 206
Target Start/End: Original strand, 69088 - 69239
Alignment:
| Q |
55 |
caacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgc |
154 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69088 |
caacaattgcaatgatctatcttcatcacgatgaaatttcaaagattacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgc |
69187 |
T |
|
| Q |
155 |
gcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
69188 |
gcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
69239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052 (Bit Score: 206; Significance: 1e-113; HSPs: 8)
Name: scaffold0052
Description:
Target: scaffold0052; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 25104 - 25309
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25104 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
25203 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25204 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
25303 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
25304 |
tcaaac |
25309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #2
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 30872 - 30667
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30872 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
30773 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30772 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
30673 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
30672 |
tcaaac |
30667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #3
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 47486 - 47691
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47486 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
47585 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47586 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
47685 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
47686 |
tcaaac |
47691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5934 - 6139
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5934 |
cgtagtcaacgcgtgctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
6033 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6034 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
6133 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
6134 |
tcaaac |
6139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 26966 - 27171
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26966 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgtcgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
27065 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27066 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
27165 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
27166 |
tcaaac |
27171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 35726 - 35521
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
35726 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatcttcatcacgatgaaatttcaaagat |
35627 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35626 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
35527 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
35526 |
tcaaac |
35521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 64033 - 63843
Alignment:
| Q |
16 |
ctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
64033 |
ctgatgactcgcgcttactaggaattcctcattgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacccgggcctgtcg |
63934 |
T |
|
| Q |
116 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
63933 |
gccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
63843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0052; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 42189 - 42271
Alignment:
| Q |
124 |
tatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
206 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42189 |
tatatactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaaac |
42271 |
T |
|
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Target: scaffold0021 (Bit Score: 206; Significance: 1e-113; HSPs: 2)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 45748 - 45953
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45748 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
45847 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45848 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
45947 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
|||||| |
|
|
| T |
45948 |
tcaaac |
45953 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 62691 - 62720
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgct |
30 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
62691 |
cgtagtcaacgcgagctgatgactcgcgct |
62720 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0515 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: scaffold0515
Description:
Target: scaffold0515; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 7804 - 7603
Alignment:
| Q |
5 |
gtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacc |
104 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
7804 |
gtcaacgtgagctgatgactcgcgcttactaggaattcctcgttgaagatcaacaattgcaatgatctatcaccatcatgatgaaatttcaaagattacc |
7705 |
T |
|
| Q |
105 |
cgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaa |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
7704 |
cgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagagcatcacagacctgttattgccttaa |
7605 |
T |
|
| Q |
205 |
ac |
206 |
Q |
| |
|
|| |
|
|
| T |
7604 |
ac |
7603 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 7814 - 7613
Alignment:
| Q |
5 |
gtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagattacc |
104 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
7814 |
gtcaacgtgagctgatgactcgcgcttactaggaattcctcgttgaagatcaacaattgcaatgatctatcaccatcatgatgaaatttcaaagattacc |
7715 |
T |
|
| Q |
105 |
cgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcctcaa |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
7714 |
cgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagagcatcacagacctgttattgccttaa |
7615 |
T |
|
| Q |
205 |
ac |
206 |
Q |
| |
|
|| |
|
|
| T |
7614 |
ac |
7613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 25429 - 25224
Alignment:
| Q |
1 |
cgtagtcaacgcgagctgatgactcgcgcttactaggaattcctcgttgaagaccaacaattgcaatgatctatccccatcacgatgaaatttcaaagat |
100 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
25429 |
cgtagtcaacgtgagctgatgactcgcacttactaggaattcctcgttgaagatcaacaattgcaatgatctatcaccatcatgatgaaatttcaaagat |
25330 |
T |
|
| Q |
101 |
tacccgggcctgtcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatctaagggcatcacagacctgttattgcc |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
25329 |
tacccgggcctatcggccaaggctatagactcgttgaatacatcagtgtagcgcgcgtgcggcccagaacatcgaagggcatcacagacctgttattgcc |
25230 |
T |
|
| Q |
201 |
tcaaac |
206 |
Q |
| |
|
| |||| |
|
|
| T |
25229 |
ttaaac |
25224 |
T |
|
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