View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16775_high_5 (Length: 251)

Name: NF16775_high_5
Description: NF16775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16775_high_5
NF16775_high_5
[»] chr8 (3 HSPs)
chr8 (1-244)||(14162620-14162864)
chr8 (94-206)||(24482353-24482468)
chr8 (125-161)||(14162833-14162869)
[»] chr3 (7 HSPs)
chr3 (1-244)||(42245020-42245264)
chr3 (36-205)||(15962308-15962475)
chr3 (76-205)||(8147530-8147663)
chr3 (206-236)||(13417952-13417982)
chr3 (156-205)||(20962135-20962184)
chr3 (204-236)||(14658880-14658912)
chr3 (76-143)||(20975979-20976047)
[»] chr1 (9 HSPs)
chr1 (1-244)||(13799923-13800167)
chr1 (76-205)||(51110391-51110519)
chr1 (76-205)||(50057557-50057690)
chr1 (122-201)||(24549315-24549392)
chr1 (93-199)||(19748599-19748708)
chr1 (164-205)||(49086673-49086714)
chr1 (125-161)||(13800136-13800172)
chr1 (206-238)||(16148928-16148960)
chr1 (206-238)||(23298415-23298447)
[»] chr6 (11 HSPs)
chr6 (36-205)||(26895635-26895804)
chr6 (36-200)||(32668693-32668857)
chr6 (76-200)||(12464208-12464332)
chr6 (44-199)||(13730349-13730504)
chr6 (104-202)||(13553390-13553488)
chr6 (76-126)||(21671834-21671884)
chr6 (76-126)||(21679250-21679300)
chr6 (206-238)||(18627006-18627038)
chr6 (206-238)||(18992814-18992846)
chr6 (206-238)||(25339688-25339720)
chr6 (206-238)||(17794411-17794443)
[»] chr4 (5 HSPs)
chr4 (65-205)||(13876009-13876148)
chr4 (100-205)||(17871522-17871626)
chr4 (79-205)||(13959021-13959146)
chr4 (119-205)||(19564871-19564957)
chr4 (205-238)||(33331531-33331564)
[»] chr7 (6 HSPs)
chr7 (76-195)||(21546795-21546914)
chr7 (76-201)||(10260120-10260248)
chr7 (76-204)||(15003324-15003456)
chr7 (206-238)||(4257090-4257122)
chr7 (206-238)||(17206875-17206907)
chr7 (206-238)||(4540787-4540819)
[»] scaffold0259 (1 HSPs)
scaffold0259 (77-205)||(20728-20854)
[»] chr5 (5 HSPs)
chr5 (76-205)||(15116828-15116956)
chr5 (76-136)||(19663715-19663776)
chr5 (76-136)||(17099629-17099690)
chr5 (206-238)||(24143685-24143717)
chr5 (206-238)||(31414220-31414252)
[»] chr2 (4 HSPs)
chr2 (76-205)||(20378220-20378348)
chr2 (92-205)||(30947370-30947486)
chr2 (206-238)||(20109405-20109437)
chr2 (206-238)||(19124791-19124823)
[»] scaffold0072 (1 HSPs)
scaffold0072 (76-205)||(18585-18717)
[»] scaffold0205 (2 HSPs)
scaffold0205 (76-136)||(10099-10160)
scaffold0205 (164-204)||(10009-10049)
[»] scaffold0062 (1 HSPs)
scaffold0062 (76-205)||(2069-2201)
[»] scaffold0074 (1 HSPs)
scaffold0074 (206-238)||(54395-54427)
[»] scaffold0123 (1 HSPs)
scaffold0123 (206-238)||(13733-13765)
[»] scaffold0011 (1 HSPs)
scaffold0011 (206-238)||(172313-172345)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 14162864 - 14162620
Alignment:
Q  1 tgagaagatagtagaccaagg-tttttatgtagggaatcactgtgattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcg 99  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  14162864 tgagatgatagtagaccaagggtttttatgtagggaatcactgtgattgtgagtaagaggaattgagtagggaatttcatatctagcactaggagagtcg 14162765  T
Q  100 taggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcct 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14162764 taggtagaaattacaccggtagtgattaagtgagaagatagtagactaagggtttctatgtatgctttgaattgatactactatagtgaatttccttcct 14162665  T
Q  200 ggcttgtgatgagtcaataattagtgttttaaatatattcttcga 244  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  14162664 ggcttgtgatgagtcaataattagtgttttaaatatattattcga 14162620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 206
Target Start/End: Complemental strand, 24482468 - 24482353
Alignment:
Q  94 gagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagg---gtttctatgtatgctttgaattgatattactatagtgaat 190  Q
    ||||| ||| |||||||| |||   |||||||||||||||||| ||||||||    |   |||| ||||||||||  ||||||||| |||||||||||||    
T  24482468 gagtcttagatagaaattgcacgagtagtgattaagtgagaagctagtagactggagaaagtttttatgtatgctgcgaattgatactactatagtgaat 24482369  T
Q  191 ttccttcctggcttgt 206  Q
    ||||||| || |||||    
T  24482368 ttccttcttgacttgt 24482353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 14162869 - 14162833
Alignment:
Q  125 ttaagtgagaagatagtagaccaagggtttctatgta 161  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  14162869 ttaagtgagatgatagtagaccaagggtttttatgta 14162833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 42245264 - 42245020
Alignment:
Q  1 tgagaagatagtagaccaagg-tttttatgtagggaatcactgtgattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcg 99  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42245264 tgagatgatagtagatcaagggtttttatgtagggaatcactgtgattgtgagtaagaggaattgagtagggaatttcatatctaggactaggagagtcg 42245165  T
Q  100 taggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcct 199  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42245164 taggtagaaattacactggtagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatactactatagtgaatttccttcct 42245065  T
Q  200 ggcttgtgatgagtcaataattagtgttttaaatatattcttcga 244  Q
    || |||||||||||||||||||||||||||||||||||| |||||    
T  42245064 ggattgtgatgagtcaataattagtgttttaaatatattattcga 42245020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 15962475 - 15962308
Alignment:
Q  36 atcactgtgattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaa 135  Q
    ||||||| ||||||||  |||||||| |||||| || || ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||     
T  15962475 atcactgggattgtgattaagaggaagtgagtaagggatctcatatctaggactaggagagtcttaggtagaaattacacaggtagtgattaagtgaga- 15962377  T
Q  136 gatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcctggcttg 205  Q
      ||||||||| ||||||| |||||||||||  |||||||| |||||||||||||||||||||| |||||    
T  15962376 -gtagtagaccgagggtttttatgtatgcttcaaattgatactactatagtgaatttccttcctagcttg 15962308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 8147530 - 8147663
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagac----caagggtttctatgtatgctttgaat 171  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||| |||||| |     |  | ||| | ||||||||| ||||    
T  8147530 tcatatctaggactaggagagtcttaggtagaaattacacgggtagtgattaagtgagaagttagtaggctggtgatagttttttttgtatgcttcgaat 8147629  T
Q  172 tgatattactatagtgaatttccttcctggcttg 205  Q
    |||||||| |||||||||||||||||||||||||    
T  8147630 tgatattattatagtgaatttccttcctggcttg 8147663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 236
Target Start/End: Original strand, 13417952 - 13417982
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatata 236  Q
    |||||||||||||||||||||||||||||||    
T  13417952 tgatgagtcaataattagtgttttaaatata 13417982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 20962135 - 20962184
Alignment:
Q  156 tatgtatgctttgaattgatattactatagtgaatttccttcctggcttg 205  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||||| ||||    
T  20962135 tatgtatgcttcgaattgatactactatagtggctttccttcctgacttg 20962184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 14658880 - 14658912
Alignment:
Q  204 tgtgatgagtcaataattagtgttttaaatata 236  Q
    |||||||||||||||||||||||||| ||||||    
T  14658880 tgtgatgagtcaataattagtgtttttaatata 14658912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 20975979 - 20976047
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtag 143  Q
    |||||| | ||||||| ||||||| |||||||||||  ||| | |||||||||||||||||| ||||||    
T  20975979 tcatattttggactagtgagagtcttaggtagaaataccacgggtagtgattaagtgagaagttagtag 20976047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 13800167 - 13799923
Alignment:
Q  1 tgagaagatagtagaccaaggtttt-tatgtagggaatcactgtgattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcg 99  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  13800167 tgagatgatagtagaccaagggtttatatgtagggaatcactgtgattgtgagtaagaggaattgagtaggaaatttcatatctagcactaggagagtcg 13800068  T
Q  100 taggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcct 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13800067 taggtagaaattacaccgttagtgattaagtgagaagatagtagactaagggtttctatgtatgctttgaattgatactactatagtgaatttccttcct 13799968  T
Q  200 ggcttgtgatgagtcaataattagtgttttaaatatattcttcga 244  Q
    | ||||||||||||||||||||||||||||||||||||| |||||    
T  13799967 gacttgtgatgagtcaataattagtgttttaaatatattattcga 13799923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 51110519 - 51110391
Alignment:
Q  76 tcatatctaggactagg-agagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattga 174  Q
    ||||||||||||||||| |||||  |||||||||||| ||| | |||||||||||||||||| | ||||||| ||||||| |||||||||||| ||||||    
T  51110519 tcatatctaggactagggagagttttaggtagaaattgcacaggtagtgattaagtgagaagtt-gtagaccgagggtttttatgtatgctttaaattga 51110421  T
Q  175 tattactatagtgaatttccttcctggcttg 205  Q
    || |||| |||||||||| |||| |||||||    
T  51110420 tactact-tagtgaattttcttcttggcttg 51110391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 50057690 - 50057557
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagacc----aagggtttctatgtatgctttgaa 170  Q
    |||||| ||||||||| ||||||| |||||| ||||| ||| || ||||||||||||||||| ||||||       || | ||| ||||||||||| |||    
T  50057690 tcatatttaggactagtgagagtcttaggtaaaaattccacggacagtgattaagtgagaagttagtaggttggtgaaagcttt-tatgtatgcttcgaa 50057592  T
Q  171 ttgatattactatagtgaatttccttcctggcttg 205  Q
    ||||||||||||||||| |||||||||||| ||||    
T  50057591 ttgatattactatagtggatttccttcctgacttg 50057557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 24549392 - 24549315
Alignment:
Q  122 tgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcctgg 201  Q
    ||||||||||||||| | ||||||| ||  ||| ||||||||||||||||||||| |||| |||||||||||||||||||    
T  24549392 tgattaagtgagaagct-gtagaccgagaatttttatgtatgctttgaattgatactact-tagtgaatttccttcctgg 24549315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 19748599 - 19748708
Alignment:
Q  93 agagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagac----caagggtttctatgtatgctttgaattgatattactatagtga 188  Q
    |||||| |||||||||||| ||| | |||||||||||||||||| |||||| |     || | ||| ||||||||||| ||||||||| || ||||||||    
T  19748599 agagtcttaggtagaaattgcacggctagtgattaagtgagaagttagtaggctggtgaaagcttt-tatgtatgcttcgaattgatactattatagtga 19748697  T
Q  189 atttccttcct 199  Q
    ||||| |||||    
T  19748698 atttcattcct 19748708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 49086673 - 49086714
Alignment:
Q  164 ctttgaattgatattactatagtgaatttccttcctggcttg 205  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  49086673 ctttgaattgatactactatagtgaatttctttcctggcttg 49086714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 13800172 - 13800136
Alignment:
Q  125 ttaagtgagaagatagtagaccaagggtttctatgta 161  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  13800172 ttaagtgagatgatagtagaccaagggtttatatgta 13800136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 16148960 - 16148928
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  16148960 tgatgagtcaataattagtgtttttaatatatt 16148928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 23298415 - 23298447
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  23298415 tgatgagtcaataattagtgtttttaatatatt 23298447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 205
Target Start/End: Complemental strand, 26895804 - 26895635
Alignment:
Q  36 atcactgtgattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaa 135  Q
    ||||||| |||| |||  || ||||| | ||||||| |||| ||||||||||||||||||||| |||||||||||| |||   |||||||||||||||||    
T  26895804 atcactgggattttgattaaaaggaagttagtaggggatttgatatctaggactaggagagtcttaggtagaaatttcacgagtagtgattaagtgagaa 26895705  T
Q  136 gatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcctggcttg 205  Q
    ||||||||||| ||||||  ||||||||||||||||||||| |||||| |||||||||||| ||||||||    
T  26895704 gatagtagaccgagggttattatgtatgctttgaattgatactactattgtgaatttcctttctggcttg 26895635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 200
Target Start/End: Complemental strand, 32668857 - 32668693
Alignment:
Q  36 atcactgtgattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaa 135  Q
    ||||||| ||||||||  |||||||| |||||||||||| |||| |||| ||||||||||||| |||||||||||||||| | |||||||||||||||||    
T  32668857 atcactgggattgtgattaagaggaagtgagtagggaatctcatttctatgactaggagagtcttaggtagaaattacacgggtagtgattaagtgagaa 32668758  T
Q  136 gatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcctg 200  Q
    | ||||||||| | ||||| ||||||| ||| ||||||||| ||| ||||| |||||||||||||    
T  32668757 gctagtagaccgatggtttttatgtattcttcgaattgatactaccatagtaaatttccttcctg 32668693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 12464332 - 12464208
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgat 175  Q
    ||||||| ||||||||||||||| |||||||||||| ||| | |||||||||||||||||| ||||||||||| | ||| |||||||| |||||||||||    
T  12464332 tcatatccaggactaggagagtcataggtagaaattgcacgggtagtgattaagtgagaagctagtagaccaaagatttttatgtatgttttgaattgat 12464233  T
Q  176 attactatagtgaatttccttcctg 200  Q
    | |||| ||||||||||||||||||    
T  12464232 actactttagtgaatttccttcctg 12464208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 13730349 - 13730504
Alignment:
Q  44 gattgtgagcaagaggaattgagtagggaatttcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtag 143  Q
    ||||||||  ||||| || ||||||||| || ||||||||||||||||||| | | ||||||||||||| || | || ||||||||||||||  || |||    
T  13730349 gattgtgattaagagaaagtgagtaggggatctcatatctaggactaggagtgccttaggtagaaattagacgggtaatgattaagtgagaatctattag 13730448  T
Q  144 accaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcct 199  Q
    ||    ||||| ||||||||||| || ||||||  |||||||||||||||||||||    
T  13730449 actggcggtttttatgtatgcttcgagttgataccactatagtgaatttccttcct 13730504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 13553488 - 13553390
Alignment:
Q  104 tagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcctggc 202  Q
    |||||||||||| | ||||||||| ||  |||| ||||||||| | ||||| |||||||||||  || | ||| || ||||||||||||||||||||||    
T  13553488 tagaaattacacaggtagtgattaggtacgaagttagtagaccgatggtttttatgtatgcttcaaaataatactattatagtgaatttccttcctggc 13553390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 21671834 - 21671884
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgatt 126  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  21671834 tcatatctaggactatgagagtcttaggtagaaattacacggatagtgatt 21671884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 21679250 - 21679300
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgatt 126  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  21679250 tcatatctaggactatgagagtcttaggtagaaattacacggatagtgatt 21679300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 18627006 - 18627038
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  18627006 tgatgagtcaataattagtgttttaaatatatt 18627038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 18992814 - 18992846
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  18992814 tgatgagtcaataattagtgttttaaatatatt 18992846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 25339720 - 25339688
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  25339720 tgatgagtcaataattagtgttttaaatatatt 25339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 17794443 - 17794411
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  17794443 tgatgagtcaataattagtgtttttaatatatt 17794411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 65 - 205
Target Start/End: Complemental strand, 13876148 - 13876009
Alignment:
Q  65 agtagggaatttcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgc 164  Q
    ||||||| || ||||||||||||||| | ||||| |||||||||||| ||    |||||||||||||||||| ||||||||||| ||||| ||||||| |    
T  13876148 agtaggggatctcatatctaggactacgtgagtcttaggtagaaattgcataagtagtgattaagtgagaagctagtagaccaatggttt-tatgtattc 13876050  T
Q  165 tttgaattgatattactatagtgaatttccttcctggcttg 205  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  13876049 tttgaattgatactactatagtgaatttccttcctggcttg 13876009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 100 - 205
Target Start/End: Original strand, 17871522 - 17871626
Alignment:
Q  100 taggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcct 199  Q
    |||||||||||| ||| | ||||||||| |||||||| ||||||||| ||| ||| ||||||| ||||||||||||| |||| |||||||||||||||||    
T  17871522 taggtagaaattgcacaggtagtgattaggtgagaagctagtagaccgaggatttttatgtatactttgaattgatactact-tagtgaatttccttcct 17871620  T
Q  200 ggcttg 205  Q
    | ||||    
T  17871621 gacttg 17871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 13959146 - 13959021
Alignment:
Q  79 tatctaggactagg-agagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatat 177  Q
    |||||||||||||| |||||| |||||||||||| ||  | ||||||||||||||||||   ||||| | | | ||| |||||||||||||| ||||||     
T  13959146 tatctaggactagggagagtcttaggtagaaattgcatgggtagtgattaagtgagaag-ccgtagatcgacgatttttatgtatgctttgatttgatac 13959048  T
Q  178 tactatagtgaatttccttcctggcttg 205  Q
    |||| || ||||||||||||||||||||    
T  13959047 tact-taatgaatttccttcctggcttg 13959021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 19564957 - 19564871
Alignment:
Q  119 tagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgatattactatagtgaatttccttcctggcttg 205  Q
    ||||||||| |||||||| ||||||||||||||||| |||| ||||||  || ||||| || ||||||| ||||||||| |||||||    
T  19564957 tagtgattaggtgagaagctagtagaccaagggtttttatgcatgcttcaaactgatactattatagtggatttccttcttggcttg 19564871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 33331564 - 33331531
Alignment:
Q  205 gtgatgagtcaataattagtgttttaaatatatt 238  Q
    ||||||||||||||||||||||||| ||||||||    
T  33331564 gtgatgagtcaataattagtgtttttaatatatt 33331531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 21546795 - 21546914
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgat 175  Q
    ||||||||||||||||||||||| |||||||||||| ||| | |||||||||||||| ||  ||||||||||||||||| ||||| ||||||||||||||    
T  21546795 tcatatctaggactaggagagtcataggtagaaattgcacgggtagtgattaagtgacaaactagtagaccaagggtttttatgtttgctttgaattgat 21546894  T
Q  176 attactatagtgaatttcct 195  Q
    | |||| |||||||||||||    
T  21546895 actactttagtgaatttcct 21546914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 76 - 201
Target Start/End: Original strand, 10260120 - 10260248
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagac----caagggtttctatgtatgctttgaat 171  Q
    ||||||||| ||||||||||||| |||||||||||||||| | |||||||||||||||||| |||||| |     || | ||| |||||||||||  |||    
T  10260120 tcatatctatgactaggagagtcttaggtagaaattacacgggtagtgattaagtgagaagttagtaggctggtgaaagcttt-tatgtatgcttcaaat 10260218  T
Q  172 tgatattactatagtgaatttccttcctgg 201  Q
    ||||| ||||| ||||||||||||||||||    
T  10260219 tgatactactagagtgaatttccttcctgg 10260248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 204
Target Start/End: Original strand, 15003324 - 15003456
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagac---caagggtttctatgtatgctttgaat 171  Q
    |||||||||||||||| ||||||| ||||||||| || ||| | |||||||||||||||||  ||||||||     |  | || ||||||||||| ||||    
T  15003324 tcatatctaggactagtgagagtcttaggtagaagttgcacgggtagtgattaagtgagaaattagtagactggtgatagcttttatgtatgcttcgaat 15003423  T
Q  172 tgatattactatagtgaatttccttcctggctt 204  Q
    ||||| ||||||||| |||||| ||||||||||    
T  15003424 tgatactactatagtaaatttcattcctggctt 15003456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 4257122 - 4257090
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  4257122 tgatgagtcaataattagtgttttaaatatatt 4257090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 17206907 - 17206875
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  17206907 tgatgagtcaataattagtgttttaaatatatt 17206875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 4540787 - 4540819
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  4540787 tgatgagtcaataattagtgtttttaatatatt 4540819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 205
Target Start/End: Original strand, 20728 - 20854
Alignment:
Q  77 catatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattgata 176  Q
    ||||||||| |||| ||||||| ||| |||||||| ||| |||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||    
T  20728 catatctagaactacgagagtcatag-tagaaattgcactgatagtgattaagtgataagctagtagaccaagggtttttatgtttgctttgaattgata 20826  T
Q  177 ttactatagtgaatttccttcctggcttg 205  Q
     |||| | |||||||||||||||| ||||    
T  20827 ctact-tggtgaatttccttcctgacttg 20854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 15116956 - 15116828
Alignment:
Q  76 tcatatctaggactagg-agagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattga 174  Q
    ||||||||||||||||| |||||| |||||||||||| ||| | | |||||||||||||||| | ||||||| ||||||| |||||||| ||||||||||    
T  15116956 tcatatctaggactagggagagtcttaggtagaaattgcacgggtggtgattaagtgagaagtt-gtagaccgagggtttttatgtatgatttgaattga 15116858  T
Q  175 tattactatagtgaatttccttcctggcttg 205  Q
    || |||| |||||||||||||||||| ||||    
T  15116857 taatact-tagtgaatttccttcctgacttg 15116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 19663776 - 19663715
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaag 136  Q
    |||||||||||| ||| ||||||| |||||||||||||||| | ||||||||||||||||||    
T  19663776 tcatatctaggaatagtgagagtcttaggtagaaattacacgggtagtgattaagtgagaag 19663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 17099629 - 17099690
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaag 136  Q
    |||||||||| ||||| ||||||| |||||||||||| ||| | | ||||||||||||||||    
T  17099629 tcatatctagaactagtgagagtcttaggtagaaattgcacgggtggtgattaagtgagaag 17099690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 24143717 - 24143685
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    ||||||||||||||| |||||||||||||||||    
T  24143717 tgatgagtcaataataagtgttttaaatatatt 24143685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 31414220 - 31414252
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    ||||||||||||||||| |||||||||||||||    
T  31414220 tgatgagtcaataattaatgttttaaatatatt 31414252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 20378220 - 20378348
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagaccaagggtttctatgtatgctttgaattga 174  Q
    |||||||||||||||| ||||||| |||||||||||| ||| | |||||||||||||||||| | ||| | | ||||||| |||||| ||||||||||||    
T  20378220 tcatatctaggactagagagagtcttaggtagaaattgcacgggtagtgattaagtgagaagct-gtaaatcgagggtttgtatgtacgctttgaattga 20378318  T
Q  175 tattactatagtgaatttccttcctggcttg 205  Q
    || |||| ||||| |||| ||||||||||||    
T  20378319 tactact-tagtgcattttcttcctggcttg 20378348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 30947486 - 30947370
Alignment:
Q  92 gagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagacc----aagggtttctatgtatgctttgaattgatattactatagtg 187  Q
    ||||||| |||||||||||||||| |  ||||||||||||||||| |||||| |     ||   ||| ||||||||||| ||||||||||||| ||||||    
T  30947486 gagagtcttaggtagaaattacacgggcagtgattaagtgagaagttagtaggctggtgaaaacttt-tatgtatgcttcgaattgatattaccatagtg 30947388  T
Q  188 aatttccttcctggcttg 205  Q
    ||||||||||||| ||||    
T  30947387 aatttccttcctgacttg 30947370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 20109437 - 20109405
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  20109437 tgatgagtcaataattagtgttttaaatatatt 20109405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 19124823 - 19124791
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  19124823 tgatgagtcaataattagtgtttttaatatatt 19124791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 18717 - 18585
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagta----gaccaagggtttctatgtatgctttgaat 171  Q
    |||||| |||||||| |||||||||||||||||||  ||| | |||||||||||||||||| |||||    |   || | ||| ||||||||||| ||||    
T  18717 tcatatttaggactatgagagtcgtaggtagaaataccacgggtagtgattaagtgagaagttagtaggttggtgaaagattt-tatgtatgcttcgaat 18619  T
Q  172 tgatattactatagtgaatttccttcctggcttg 205  Q
    ||||| |||||||||| ||||||||| |||||||    
T  18618 tgatactactatagtggatttccttcatggcttg 18585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 10160 - 10099
Alignment:
Q  76 tcatatctaggactag-gagagtcgtaggtagaaattacaccgatagtgattaagtgagaag 136  Q
    |||||||||||||||| ||||||| ||| |||||||||||| | ||||||||||||||||||    
T  10160 tcatatctaggactagtgagagtcttagatagaaattacacaggtagtgattaagtgagaag 10099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 10049 - 10009
Alignment:
Q  164 ctttgaattgatattactatagtgaatttccttcctggctt 204  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  10049 ctttgaattgatactattatagtgaatttccttcctggctt 10009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 2069 - 2201
Alignment:
Q  76 tcatatctaggactaggagagtcgtaggtagaaattacaccgatagtgattaagtgagaagatagtagac----caagggtttctatgtatgctttgaat 171  Q
    |||||| ||||| |||||||||| |||||||||||  ||| | |||||||||||||||||| |||||| |     || | ||| ||||||||||| ||||    
T  2069 tcatatttaggattaggagagtcttaggtagaaataccacaggtagtgattaagtgagaagttagtaggctggtgaaagcttt-tatgtatgcttcgaat 2167  T
Q  172 tgatattactatagtgaatttccttcctggcttg 205  Q
    ||||| || |||| || ||||| |||||||||||    
T  2168 tgatactagtataatggatttctttcctggcttg 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 54427 - 54395
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||||||||||||    
T  54427 tgatgagtcaataattagtgttttaaatatatt 54395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 13733 - 13765
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||||||||||||||||||||||| ||||||||    
T  13733 tgatgagtcaataattagtgtttttaatatatt 13765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 172313 - 172345
Alignment:
Q  206 tgatgagtcaataattagtgttttaaatatatt 238  Q
    |||| ||||||||||||||||||||||||||||    
T  172313 tgataagtcaataattagtgttttaaatatatt 172345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University