View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16775_low_4 (Length: 316)
Name: NF16775_low_4
Description: NF16775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16775_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 38832071 - 38832375
Alignment:
| Q |
1 |
attatttttggaaggtacttctatataagaatagtatataatatattaggcttgtggatggcgtttttccnnnnnnntttatttttta----ataaaata |
96 |
Q |
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| T |
38832071 |
attatttttggaaggtacttctatataagaatagtatgtaatatattaggcttgtggatggcgtttttccaattttttttattttttattttataaaata |
38832170 |
T |
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| Q |
97 |
aaatgaaatcaagaatgctcgtgaattttttgtaatataattgattaatgaaatttgaaaggtgtaatggatattttttgttgttgattaatatgtgtaa |
196 |
Q |
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| T |
38832171 |
aaatgaaatcaagaatgctcgtgaattttttgtaatataattgattaatgaaatttgaaaggtgtaatggatattttttgttgttgattaatatgtgtaa |
38832270 |
T |
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| Q |
197 |
tggatatgtatgaagagaaagagaaatattgtttgtgagttgaagctatttttgtcataattagtggaaatgaaagagatatgtgatgtgaggaagggat |
296 |
Q |
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| T |
38832271 |
tggatatgtatgaagagaaagagaaatattgtttgtgagttgaagctatttttgtcataattagtggaaatgaaagagatatgtgatgtgaggaagggat |
38832370 |
T |
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| Q |
297 |
gatgt |
301 |
Q |
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||||| |
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| T |
38832371 |
gatgt |
38832375 |
T |
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