View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16775_low_5 (Length: 297)
Name: NF16775_low_5
Description: NF16775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16775_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 10975877 - 10976154
Alignment:
| Q |
1 |
ttgctttccatagttatcaaaccttctcttggttttctcaactgttgcttttatggccagcgctggagcactgtccggagcgtaaagcttgagggatgat |
100 |
Q |
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| T |
10975877 |
ttgctttccatagttatcaaaccttctcttggttttctcaactgttgcttttatggccagcgctggagcgctgtccggagcgtaaagcttgagtgatgat |
10975976 |
T |
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| Q |
101 |
tcaagctttttgattgattgtttctcacgtttggcgaattgttttgattctctgcatggtgttagaccggagatgtcggcgacagcggggagtggtgatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
10975977 |
tcaagctttttgattgattgtttctcacgtttggcgaattgttttgattctctgcatggtgttaggccggagatgtcggcgacagcggggagtggtgatg |
10976076 |
T |
|
| Q |
201 |
agatgaggattgatgagagtgctagtgctgctgagaatgcttttagatttgagtttacatcgttgcttggtttttctt |
278 |
Q |
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| T |
10976077 |
agatgaggattgatgagagtgctagtgctgctgagaatgcttttagatttgagtttacatcgttggttggtttttctt |
10976154 |
T |
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