View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16776_low_7 (Length: 380)
Name: NF16776_low_7
Description: NF16776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16776_low_7 |
 |  |
|
| [»] chr5 (7 HSPs) |
 |  |
|
| [»] scaffold0468 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 360; Significance: 0; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 17 - 380
Target Start/End: Original strand, 15805069 - 15805432
Alignment:
| Q |
17 |
atctatttctacggaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccattacatgaagtggaagtgcaatcatca |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15805069 |
atctatttctacggaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccattacatgaagtggaagtgcaatcatca |
15805168 |
T |
 |
| Q |
117 |
cttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcaccta |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15805169 |
cttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcaccta |
15805268 |
T |
 |
| Q |
217 |
atgtgaaaatagagccatcagctaaagaggaagtacaaccatcacccgatgtgaaaatggaaccatcacttgtcaagaatgaaccattaccgaacgcaaa |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15805269 |
atgtgaaaatagagccatcagctaaagaggaagcacaaccatcacccgatgtgaaaatggaaccatcacttgtcaagaatgaaccattaccgaacgcaaa |
15805368 |
T |
 |
| Q |
317 |
tagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaaccagaaatga |
380 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15805369 |
tagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaaccagaaatga |
15805432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 12600648 - 12600574
Alignment:
| Q |
17 |
atctatttctacggaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccatt |
91 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12600648 |
atctattgctaccgaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccatt |
12600574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 12597380 - 12597459
Alignment:
| Q |
294 |
aatgaaccattaccgaacgcaaatagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaacca |
373 |
Q |
| |
|
||||| ||||||| ||| |||| |||||||||| | | || ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12597380 |
aatgagccattactgaagccaaacggaaaaatattcataggatttgcaaagagagtgggagaatgtttgtgcttgaacca |
12597459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 12597284 - 12597370
Alignment:
| Q |
81 |
attgagccattacatgaagtggaagtgcaatcatcacttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcactt |
167 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||| | || ||||| |||| |||| || |||||| || ||| |||||||||| |
|
|
| T |
12597284 |
attgagccattacatgaagtggaggtgcaaccatcaccgaatgggaaaacggagccatcagctgaagaggaagtacgaccatcactt |
12597370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 12597298 - 12597368
Alignment:
| Q |
191 |
tgaagaggatgtacaaccatcacctaatgtgaaaatagagccatcagctaaagaggaagtacaaccatcac |
261 |
Q |
| |
|
||||| ||| || ||||||||||| |||| ||||| |||||||||||| |||||||||||| |||||||| |
|
|
| T |
12597298 |
tgaagtggaggtgcaaccatcaccgaatgggaaaacggagccatcagctgaagaggaagtacgaccatcac |
12597368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 30419927 - 30419987
Alignment:
| Q |
213 |
cctaatgtgaaaatagagccatcagctaaagaggaagtacaaccatcacccgatgtgaaaa |
273 |
Q |
| |
|
||||||||||||||||| |||||| || |||||||||||||| |||| | |||||||||| |
|
|
| T |
30419927 |
cctaatgtgaaaatagatccatcacctgaagaggaagtacaatcatcccttgatgtgaaaa |
30419987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 12597311 - 12597389
Alignment:
| Q |
156 |
caaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcacctaatgtgaaaatagagccat |
234 |
Q |
| |
|
|||||||||| ||| |||||||||| |||||||||||||||| |||| |||||||| || ||| |||| ||||||| |
|
|
| T |
12597311 |
caaccatcaccgaatgggaaaacggagccatcagctgaagaggaagtacgaccatcacttactgtaaaaaatgagccat |
12597389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 376
Target Start/End: Original strand, 3366106 - 3366468
Alignment:
| Q |
17 |
atctatttctacggaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccattacatgaagtggaagtgcaatcatca |
116 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
3366106 |
atctattgctacggaagttgagccttcaagtactattgaagttgacccatcaactagcacaaatattgagccattgtatgaagtggaagtgcaatcatca |
3366205 |
T |
 |
| Q |
117 |
cttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcaccta |
216 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| |||| |
|
|
| T |
3366206 |
cttagtgtgaaattggaggcatcgatcgaagagcaactacaaccatcacttgatgtgaaaacagagccatcagctgaagaggatgtgcaaccatctccta |
3366305 |
T |
 |
| Q |
217 |
atgtgaaaatagagccatcagctaaagaggaagtacaaccatcacccgatgtgaaaatggaaccatcac---ttgtcaagaatgaaccattaccgaacgc |
313 |
Q |
| |
|
||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||| | |
|
|
| T |
3366306 |
atgtgaaaacagaaccatcagctgaagaggaagtacaaccatcacccaatgtgaaaatggaaccatcacttgttgtcaagaatgaaccattaccaaacac |
3366405 |
T |
 |
| Q |
314 |
aaatagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaaccagaa |
376 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3366406 |
aaatagaaaaatctttacaagacttgcaaagagagtgggagaatgtttatgcatgaaccagaa |
3366468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 205 - 373
Target Start/End: Complemental strand, 3389224 - 3389053
Alignment:
| Q |
205 |
aaccatcacctaatgtgaaaatagagccatcagctaaagaggaagtacaaccatcacccgatgtgaaaatggaaccatcacttgt---caagaatgaacc |
301 |
Q |
| |
|
|||| ||||| ||||| ||||| || ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
3389224 |
aaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcagttgttgtcaagaatgaacc |
3389125 |
T |
 |
| Q |
302 |
attaccgaacgcaaatagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaacca |
373 |
Q |
| |
|
||||| ||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3389124 |
attactgaagacaagtagaaaaaactttacgagacttgcaaagagagtgggagaatgtttatgcttgaacca |
3389053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 204 - 376
Target Start/End: Original strand, 31177875 - 31178050
Alignment:
| Q |
204 |
caaccatcacctaatgtgaaaatagagccatcagctaaagaggaagtacaaccatcacccgatgtgaaaatggaaccatcacttgt---caagaatgaac |
300 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| ||||||| || || ||||||| |||||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
31177875 |
caaccatcacctaatgtgaaaacggagccatcagctgaagaggacgtgcagccatcacttgatgtgaaaacggaaccattacttgttgtcaagaatgaac |
31177974 |
T |
 |
| Q |
301 |
cattaccgaacgcaaatagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaaccagaa |
376 |
Q |
| |
|
|| ||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
31177975 |
caataccgaagacaaatagaaaaatcttcacaagacttgcaaagagactgggagaatgtttatgcttgatccagaa |
31178050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 29 - 236
Target Start/End: Original strand, 3319699 - 3319906
Alignment:
| Q |
29 |
ggaagttgagccatcaagtactattgaagttgacccatcaactagcacaaatattgagccattacatgaagtggaagtgcaatcatcacttagtgtgaaa |
128 |
Q |
| |
|
|||| ||||| |||||| |||||| |||||||||||||| ||| | |||| || ||||||||||||||||||||| | ||| |||||| | ||| ||| |
|
|
| T |
3319699 |
ggaaattgagtcatcaaatactatggaagttgacccatctactgacgcaaaaatggagccattacatgaagtggaattccaaccatcacccaatgtaaaa |
3319798 |
T |
 |
| Q |
129 |
atggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcacctaatgtgaaaatag |
228 |
Q |
| |
|
| ||| |||| || |||| | || ||||||||||||| || ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| | |
|
|
| T |
3319799 |
accgagacatcagctgaagtggaaatacaaccatcactgaatttgaaaacggagccatcagctgaagaggaagtacaattatcacctaatgtgaaaatgg |
3319898 |
T |
 |
| Q |
229 |
agccatca |
236 |
Q |
| |
|
|||||||| |
|
|
| T |
3319899 |
agccatca |
3319906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 3319932 - 3320019
Alignment:
| Q |
286 |
ttgtcaagaatgaaccattaccgaacgcaaatagaaaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaacca |
373 |
Q |
| |
|
||||||| ||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
3319932 |
ttgtcaaaaatgaaccattaccgaagacaagtagaaaaatctttacaagactggcaaagagagtgggaaaatgtttatgcttgaacca |
3320019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 3319778 - 3319911
Alignment:
| Q |
156 |
caaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcacctaatgtgaaaatagagccatcagctaaagaggaagtacaac |
255 |
Q |
| |
|
|||||||||| |||| ||||| ||| |||||||||||| ||| |||||||||||| ||| |||||| |||||||||||| |||||||||||||| |
|
|
| T |
3319778 |
caaccatcacccaatgtaaaaaccgagacatcagctgaagtggaaatacaaccatcactgaatttgaaaacggagccatcagctgaagaggaagtacaat |
3319877 |
T |
 |
| Q |
256 |
catcacccgatgtgaaaatggaaccatcacttgt |
289 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||| |
|
|
| T |
3319878 |
tatcacctaatgtgaaaatggagccatcacttgt |
3319911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 31177848 - 31177948
Alignment:
| Q |
81 |
attgagccattacatgaagtggaagtgcaatcatcacttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaacgg |
180 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||| || |||||||| |||| |||| || |||||| | | || |||||||||||||||||||||| |
|
|
| T |
31177848 |
attgagccattacatgaagtggaaatgcaaccatcacctaatgtgaaaacggagccatcagctgaagaggacgtgcagccatcacttgatgtgaaaacgg |
31177947 |
T |
 |
| Q |
181 |
a |
181 |
Q |
| |
|
| |
|
|
| T |
31177948 |
a |
31177948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 3389249 - 3389156
Alignment:
| Q |
84 |
gagccattacatgaagtggaagtgcaatcatcacttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaaaa |
177 |
Q |
| |
|
||||||||||||||||||||| || || | |||| | ||| |||||||| |||| || |||||| || |||||||||||||||||||||||| |
|
|
| T |
3389249 |
gagccattacatgaagtggaattgaaaccgtcacccaatgtaaaaatggatccatcagctgaagaggaagtacaaccatcacttgatgtgaaaa |
3389156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 3405593 - 3405552
Alignment:
| Q |
335 |
acttgcaaagagagtgggagaatgtttatgcttgaaccagaa |
376 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3405593 |
acttgcaaagagagtgggaggatgtttatgcttgaaccagaa |
3405552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 31177875 - 31177944
Alignment:
| Q |
156 |
caaccatcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcacctaatgtgaaaa |
225 |
Q |
| |
|
|||||||||| | |||||||||||||| |||||||||||||||| || || ||||||| | ||||||||| |
|
|
| T |
31177875 |
caaccatcacctaatgtgaaaacggagccatcagctgaagaggacgtgcagccatcacttgatgtgaaaa |
31177944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 337 - 376
Target Start/End: Original strand, 3430518 - 3430557
Alignment:
| Q |
337 |
ttgcaaagagagtgggagaatgtttatgcttgaaccagaa |
376 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
3430518 |
ttgcaaagagagtgggagaatgtttatgcatgaaccagaa |
3430557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 3389197 - 3389144
Alignment:
| Q |
184 |
catcagctgaagaggatgtacaaccatcacctaatgtgaaaatagagccatcag |
237 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | |||||||||| || ||||||| |
|
|
| T |
3389197 |
catcagctgaagaggaagtacaaccatcacttgatgtgaaaatggaaccatcag |
3389144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 370
Target Start/End: Complemental strand, 6903736 - 6903523
Alignment:
| Q |
160 |
catcacttgatgtgaaaacggaggcatcagctgaagaggatgtacaaccatcacctaatgtgaaaatagagccatcagctaaagaggaagtacaaccatc |
259 |
Q |
| |
|
|||||| ||||||||| | |||| ||| | ||||| ||| || ||||||||| |||||||||||| ||| ||| | | |||| ||||| |||||||| |
|
|
| T |
6903736 |
catcacctgatgtgaagatggagccattacctgaactggaagtgcaaccatcatctaatgtgaaaagggagtcattacttgaagatgaagtgcaaccatc |
6903637 |
T |
 |
| Q |
260 |
acccgatgtgaaaatggaaccatcac---ttgtcaagaatgaaccattaccgaacgcaaatagaaaaatatttacaagacttgcaaagagagtgggagaa |
356 |
Q |
| |
|
|| |||||||| ||||||||||||| | |||| |||| |||||||| || ||||| |||||||||| |||| || |||||| | |||||||| |
|
|
| T |
6903636 |
acttgatgtgaagatggaaccatcacctatcatcaacaatgggccattacctaagagaaatacaaaaatatttgtaagattttcaaagaaattgggagaa |
6903537 |
T |
 |
| Q |
357 |
tgtttatgcttgaa |
370 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
6903536 |
tgtttatgcttgaa |
6903523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 13938457 - 13938501
Alignment:
| Q |
327 |
tttacaagacttgcaaagagagtgggagaatgtttatgcttgaac |
371 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
13938457 |
tttacaagacttgcaaagagagttggaaaatgtttatgcttgaac |
13938501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 39287485 - 39287529
Alignment:
| Q |
327 |
tttacaagacttgcaaagagagtgggagaatgtttatgcttgaac |
371 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
39287485 |
tttacaagacttgcaaagagagttggaaaatgtttatgcttgaac |
39287529 |
T |
 |
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Target: scaffold0468 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0468
Description:
Target: scaffold0468; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 2984 - 2929
Alignment:
| Q |
321 |
aaaatatttacaagacttgcaaagagagtgggagaatgtttatgcttgaaccagaa |
376 |
Q |
| |
|
||||||||| |||| || |||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
2984 |
aaaatatttgtaagattttcaaagaaagtgggagaatgtttatgcttgaatcagaa |
2929 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0468; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 3272 - 3181
Alignment:
| Q |
84 |
gagccattacatgaagtggaagtgcaatcatcacttagtgtgaaaatggaggcatcggccgaagagcaactacaaccatcacttgatgtgaa |
175 |
Q |
| |
|
|||||||||| |||| ||||||||||| ||||| || |||||||| |||||||||| | ||||| || | || |||||| |||||||||| |
|
|
| T |
3272 |
gagccattacctgaactggaagtgcaaccatcatctaatgtgaaaaaggaggcatcgcctgaagataaagtgcagccatcatttgatgtgaa |
3181 |
T |
 |
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Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 373
Target Start/End: Complemental strand, 14765678 - 14765632
Alignment:
| Q |
327 |
tttacaagacttgcaaagagagtgggagaatgtttatgcttgaacca |
373 |
Q |
| |
|
|||| |||||| ||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
14765678 |
tttataagactcgcaaagagagtaggaaaatgtttatgcttgaacca |
14765632 |
T |
 |
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