View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1677_high_9 (Length: 260)
Name: NF1677_high_9
Description: NF1677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1677_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 17 - 250
Target Start/End: Complemental strand, 32236021 - 32235788
Alignment:
| Q |
17 |
gttacctcttggcagttgatcacttttatgatgatgattagctgatcacaacatgaatcacttagacgtcaaagattttttatctcatttctccttaaaa |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32236021 |
gttacctcttggcagttgatcacttttatgatgatgattagctgatcacaacatgaatcacttagacgtcaaagagtttttatctcatttctccttaaaa |
32235922 |
T |
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| Q |
117 |
cctatctataaaaaggcctggcatcataggaaaagtacaatgttaagagtctcatgtttgacgagatatgacatgaagataggtttataagtttcaacaa |
216 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235921 |
cctatctataaaaaggcctggcatcaaaggaaaagtacaatgttaagagtctcatgtttgacgagatatgacatgaagataggtttataagtttcaacaa |
32235822 |
T |
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| Q |
217 |
ttcatatctcataaagttaattttgtaagaataa |
250 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
32235821 |
ttcatatctcataaagttaattttgtaagaataa |
32235788 |
T |
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