View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16780_high_36 (Length: 317)
Name: NF16780_high_36
Description: NF16780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16780_high_36 |
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Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 3 - 302
Target Start/End: Complemental strand, 32337323 - 32337026
Alignment:
| Q |
3 |
aaggcaaacttgtcttcaattttgacctttaggtagcaccaagagtcaaaacttatccacgaaaggtcttttttgtgtgggggttgattaatgctgtgnn |
102 |
Q |
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| T |
32337323 |
aaggcaaacttgtcttcaattttgacctttaggtagcaccaagagtcaaaacttatccacgaaaggtcttttt-gtgtgggggttgattaatgctgtgtt |
32337225 |
T |
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| Q |
103 |
nnnnnnncttactaatccacaataatgatggttctagtgaacctctagtgtgtctcacaaattaagtcatctagacatactatcaaaatttgcttgtccc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
32337224 |
tttttt-cttactaatccacaataatgatggttctagtgaacctctagtgtgtctcacaaattaagtcatctagaaatactatcaaaatttgcttctccc |
32337126 |
T |
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| Q |
203 |
tcacaacccaagaaattgaattcaggtttttcttttaagaaagagattacaaattcttccaaaatcatgttggttctcaatacaagatattatcgcatat |
302 |
Q |
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|||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
32337125 |
tcacaacccaagaaattgaattcaggtttttcttataaggaagacattacaaattcttcctaaatcatgttggttctcaatacaagatattatcgcatat |
32337026 |
T |
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