View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16780_high_76 (Length: 210)
Name: NF16780_high_76
Description: NF16780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16780_high_76 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 2271709 - 2271918
Alignment:
| Q |
1 |
cattggttagtattttggtggatagtaatggtgatgcgagtattgtaaagaggaaagctcaagtttgatgttaataaatttcatgagtacgtgaaatgaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2271709 |
cattggttagtattttggtggatagtaatggtgatgcgagtattgtaaagaggaaagctcaagtttgatgttaataaatttcatgagtacgtgaaatgaa |
2271808 |
T |
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| Q |
101 |
ttcaatgctgaaatttaagatgaatattgttcttctacagaggggattttacaccaactaaaatgttcataattaaagtagttacaatgttggtgtaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2271809 |
ttcaatgctgaaatttaagatgaatattgttcttctacagaggggattttacaccaactaaaatgttcataattaaagtagttacaatgttggtgtaatg |
2271908 |
T |
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| Q |
201 |
tggtaagtaa |
210 |
Q |
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|||||||||| |
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| T |
2271909 |
tggtaagtaa |
2271918 |
T |
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